pycom10g12490

Phototropin-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0004987
Physical Location & Seq
Reverse (-)
15955923 .. 15966463
10541 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2850 bp
ATGCTCAGTGAAAGCTTTCTATCTGGGATATCAAACTCGAATTTTCAGCAGGTGGTGGATTTTCTGTTTTCAATGGAGGTCTTCAACCTGAAAGATGTTGGAGCAAACCCTAGCAACAAGCAAGCTGCTGATACTGTGGAAATTGGACCAGGAAGCAGTTCTTCAACAAAAACTTCCGCTCCTGCTGCTAAAAGGAATTCCATCACCAAGTGGATGGCATTCGAAACTGCTCAAGCTTCAGCCGATCTGAAAAGCACTTCTGCCACTGATTTAAATGGAGGGCATGCTTCCAATTCTGGCAACAACCAGATTATCACAGAGAAGGCAACCGTAGCAGCAAGAACAGCTGAGTGGGGGGTTGTGGTGAAGTCATCAGATATTGGGGAACGAAGCTTTAAGGGCATATCTGGAAGAAAAAACTCATCAGAGAGATTTGAGTCATCTGCAAGGAATTCTGAGGACTCGAATTATGGGGGTGAGATGGGAAATATTCCAAGGGTTTCTAATGAGTTGATGGCAGCTCTGTCTACACCTCAGCAGACTTTTGTTGTTTCTGATGCCACTAAGCCTGATTGCCCAATTGTGTATGCTAGTAGTGGCTTCTTTGGGATGACTGGGTATTCTTCAAAGGAGGTCATTGGCAGGAACTGCCGATTTCTTCAGGGACCGGAAACCGATCGGGATGAAGTGTTGAAAATCCGAGACGCAGTGAAGACCGGGAAAAGTTACTGCGGTAGGCTCTTCAACTACAAGAAAGATGGAACTCCCTTCTGGAATCTTCTCACCATTGCCCCAATCAAAGATGAGCAAGGAAACACCATCAAATTTATTGGAATGCAGGTTGAGGTCAACAAGTACACAGAAGGGGTGAATGACAAGGCATTGAGGGCGAATGGATTGCCCAAGTCACTAATCCGCTCTGATGCTCGTCAGAAGGAAAGCGAATTAGGCTCCATCATTGAAGTTGTCCAAACAGCTAAACATCCACGTTCTCACATCCGGGTTGCGAGTCATGACACTGTCAGCATTCATGAGGAGCAGGACAGCCTCAACCTTGATTATGTTCTGCCTAAATCCGCTGCAACTGCAAATATGATTACGCCTGGTACACAACCTCCTCAATCGGATGTGAAAGGCGATAAGTTTCACAGCATGAGCTCTCCTATTGATGCGGGCAAAATATCTCGAAAGTCAGGACGTGCTTCCTCTATGGGATTTATAACAAGGTCTCCAAGCTCTGCAAGCAGGCATGAAAAAGAACCTGTTATTGAACCGGAAGTTTTGATGACCATAGATATAGAGCCCTCTGACAATTGGGACCGTGCTGAAAGAGAAAGGGATATATGCCAAGGATTTGACATGAAAACCACATTGGAACGCATTGAAAAGAACTTTGTGATTAGTGACCCTAGAATTCCTGATTGCCCCATTATATTTGCATCTGATAGCTTCTTAGAACTGACAGAATATACCCGTGAAGAAATTTTGGGAAGAAAATGTTGTTTTCTCCAGAGACCTGAAACAGAACAAACAAGAGAACAAAGGGAAGTTACTGTCCAGTTGATCAACCATACCAAGAGTGGAAAAAAGTTTTTGAATTTATTTCATTTGCAGCCCATGCGTGACCAGAAGGGTGAACTTCAATATTTCATTGGTGTCCAACTGGATGAGAGTGGTCATGTGGAACCTCTGGGAAATCGCCTATCAGAGAGCACAGAGATAGAAAGTGCTAAATTGGTCAAAGCTACCGCACACAATGTTGATGAGGCTGTCCGAGAACTTCCTGATGCCAACTTGAAACCAGAAGAGTTATGGGCAATTCATTCTCAACCTGTCTGGCCAAGGCCTCACAAAAGGGAGAGTCCTTCTTGGACAGCAATACGGGAGATTACTGCTCGTGGTGAAAAAATTGGTCTACGTCATTTTAAGCCTGTAAAACCATTGGGATGTGGTAATACTGGAAGTGTACATTTGGTGGAACTAAAAGGTACAGGTGAACTGTACGCTATGAAGGCAATGGAGAAGTCAAGAATGTTAAACCGCAACAAGGTTCACCGAGCATGCATTGAGAGGGAGATAATTTCACTACTCGACCATCCTTTTCTCCCCACACTATACACTTCATTTGAGACCTCCACACACGTTTGTTTGATATCAGACTTTTTCAGTGGTGGAGAGTTATTTGCTTTGCTTGACCAGCAGCCAATGAAATTATTTAAGGAGGAATCTGCGAGGTTTTATGCAGCAGAGGTGGTTATCGCCTTGGAATATCTTCACTGTCTAGGAATAGTATATCGCGACCTTAAGCCTGAAAATATTTTACTCCAGAAGGATGGGCATATTGTTTTAACAGATTTTGATTTATCATTTATGACATCGTGTAAACCCCTGATTATAAGGCATCAATCGCTTAACAATAGAAGACGGTCGAGCAGTCAACCACCACCAACATTTATTGCAGAACCAGTCTCACAATCAAATTCATTTGTCGGAACTGAAGAGTACATTGCTCCTGAAATTGTTACTGGTGCAGGCCACAGCAGTGCTATTGATTGGTGGGCTCTTGGTATTTTGTTGTATGAGATGCTGTATGGCCGTACACCTTTCAGGGGTAAAAATAGGCAGAGGACATTCACCAACATCCTGCATAAAGATCTCACGTTTCCAGGCAGTGTTCCGGTAAGCCTTGCAGCACGGCAGTTGATCAATGCATTGTTGCAAAGAGACCCGGACACACGTTTAGGATCCAATACTGGGGCAAATGAAATCAAGCAACATCCTTTCTTCCGTGGATTTAATTGGCCCTTGATTCGTTGCATGAGCCCTCCGACATTCTCTTCAACCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

950

Amino Acids

105.8

Weight (kDa)

6.96

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 188 - 283 1.8e-19 PAS domain
PAS PF00989 194 - 279 2.3e-06 PAS fold
PAS_3 PF08447 194 - 278 8.6e-07 PAS fold
PAS_9 PF13426 473 - 556 6.8e-14 PAS domain
Pkinase PF00069 644 - 929 1.4e-59 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 646 - 790 4.1e-14 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1220, 2396
AarI CACCTGC 1 cut(s) 40
Acc36I ACCTGC 2 cut(s) 40, 829
AccBSI CCGCTC 2 cut(s) 179, 918
AccI GTMKAC 2 cut(s) 527, 1915
AccII CGCG 1 cut(s) 2298
AciI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
AclWI GGATC 2 cut(s) 2739, 2752
AcoI YGGCCR 2 cut(s) 1838, 2593
AcsI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
AcuI CTGAAG 3 cut(s) 222, 644, 2517
AdeI CACNNNGTG 1 cut(s) 210
AfaI GTAC 7 cut(s) 857, 1108, 1968, 1990, 2003, 2504, 2599
AfiI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
AflII CTTAAG 1 cut(s) 2303
AflIII ACRYGT 2 cut(s) 2140, 2735
AjiI CACGTC 1 cut(s) 1199
AjnI CCWGG 3 cut(s) 148, 1102, 2665
AjuI GAANNNNNNNTTGG 2 cut(s) 1355, 1387
AleI CACNNNNGTG 1 cut(s) 2541
Alw21I GWGCWC 2 cut(s) 1160, 1715
Alw26I GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
AlwI GGATC 2 cut(s) 2739, 2752
AlwNI CAGNNNCTG 1 cut(s) 648
AoxI GGCC 5 cut(s) 1838, 1844, 2533, 2593, 2801
ApeKI GCWGC 9 cut(s) 125, 185, 335, 518, 1079, 1612, 2200, 2243, 2690
ApoI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
Asp700I GAANNNNTTC 3 cut(s) 15, 157, 2271
AspS9I GGNCC 4 cut(s) 146, 665, 1318, 2802
AsuC2I CCSGG 3 cut(s) 718, 1001, 2729
AsuII TTCGAA 1 cut(s) 222
AvaII GGWCC 3 cut(s) 146, 665, 1318
BalI TGGCCA 1 cut(s) 1840
BamHI GGATCC 1 cut(s) 2744
BanII GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
BauI CACGAG 1 cut(s) 1896
BbsI GAAGAC 3 cut(s) 73, 719, 2428
Bbv12I GWGCWC 2 cut(s) 1160, 1715
BbvCI CCTCAGC 1 cut(s) 534
BbvI GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BccI CCATC 9 cut(s) 208, 209, 475, 508, 752, 827, 962, 2103, 2327
BceAI ACGGC 2 cut(s) 2580, 2711
BcgI CGANNNNNNTGC 2 cut(s) 880, 914
BciT130I CCWGG 3 cut(s) 150, 1104, 2667
BclI TGATCA 2 cut(s) 1563, 2703
BcnI CCSGG 3 cut(s) 718, 1001, 2729
BcoDI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BfaI CTAG 4 cut(s) 111, 591, 1410, 2282
BfrI CTTAAG 1 cut(s) 2303
BfuAI ACCTGC 2 cut(s) 40, 829
BglII AGATCT 1 cut(s) 2653
BisI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
BlsI GCNGC 9 cut(s) 127, 187, 337, 520, 1081, 1614, 2202, 2245, 2692
Bme1390I CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
Bme18I GGWCC 3 cut(s) 146, 665, 1318
BmgBI CACGTC 1 cut(s) 1199
BmgT120I GGNCC 4 cut(s) 146, 665, 1318, 2802
BmiI GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
BmrFI CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
BmrI ACTGGG 2 cut(s) 624, 2763
BmsI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
BmuI ACTGGG 2 cut(s) 624, 2763
BpiI GAAGAC 3 cut(s) 73, 719, 2428
BpmI CTGGAG 2 cut(s) 1493, 2309
Bpu10I CCTNAGC 1 cut(s) 534
Bpu14I TTCGAA 1 cut(s) 222
BpuEI CTTGAG 1 cut(s) 216
BpuMI CCSGG 3 cut(s) 718, 1001, 2729
BsaI GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
BsaJI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BsaWI WCCGGW 3 cut(s) 667, 1273, 2677
BsaXI ACNNNNNCTCC 6 cut(s) 163, 193, 1099, 1129, 1213, 1243
Bsc4I CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
Bse1I ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
Bse3DI GCAATG 3 cut(s) 786, 2022, 2505
BseBI CCWGG 3 cut(s) 150, 1104, 2667
BseDI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BseLI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
BseMI GCAATG 3 cut(s) 786, 2022, 2505
BseMII CTCAG 4 cut(s) 19, 339, 447, 548
BseNI ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
BseRI GAGGAG 2 cut(s) 1049, 1107
BseXI GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BsgI GTGCAG 1 cut(s) 2550
Bsh1236I CGCG 1 cut(s) 2298
Bsh1285I CGRYCG 2 cut(s) 679, 2429
BshFI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BsiEI CGRYCG 2 cut(s) 679, 2429
BsiHKAI GWGCWC 2 cut(s) 1160, 1715
BsiSI CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
BslFI GGGAC 2 cut(s) 678, 1331
BslI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
BsmAI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 678, 1331
BsmI GAATGC 3 cut(s) 218, 840, 1026
BsnI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
Bso31I GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
Bsp119I TTCGAA 1 cut(s) 222
Bsp1286I GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
Bsp1407I TGTACA 1 cut(s) 1966
Bsp143I GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
Bsp68I TCGCGA 1 cut(s) 2298
BspACI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
BspANI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BspCNI CTCAG 4 cut(s) 18, 340, 448, 547
BspFNI CGCG 1 cut(s) 2298
BspHI TCATGA 2 cut(s) 1012, 1030
BspLI GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
BspMI ACCTGC 2 cut(s) 40, 829
BspPI GGATC 2 cut(s) 2739, 2752
BspQI GCTCTTC 1 cut(s) 746
BspT104I TTCGAA 1 cut(s) 222
BspTI CTTAAG 1 cut(s) 2303
BspTNI GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
BsrBI CCGCTC 2 cut(s) 179, 918
BsrDI GCAATG 3 cut(s) 786, 2022, 2505
BsrGI TGTACA 1 cut(s) 1966
BsrI ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
BssECI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BssMI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
BssSI CACGAG 1 cut(s) 1896
BssT1I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Bst2BI CACGAG 1 cut(s) 1896
Bst2UI CCWGG 3 cut(s) 150, 1104, 2667
Bst4CI ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
Bst6I CTCTTC 4 cut(s) 746, 1800, 2493, 2842
BstAFI CTTAAG 1 cut(s) 2303
BstAPI GCANNNNNTGC 2 cut(s) 648, 1618
BstAUI TGTACA 1 cut(s) 1966
BstBI TTCGAA 1 cut(s) 222
BstC8I GCNNGC 7 cut(s) 123, 285, 1174, 1243, 1247, 2062, 2533
BstDEI CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
BstDSI CCRYGG 1 cut(s) 2788
BstFNI CGCG 1 cut(s) 2298
BstKTI GATC 6 cut(s) 247, 679, 1566, 2656, 2706, 2747
BstMAI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BstMBI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
BstMCI CGRYCG 2 cut(s) 679, 2429
BstNI CCWGG 3 cut(s) 150, 1104, 2667
BstNSI RCATGY 2 cut(s) 287, 2064
BstSCI CCNGG 6 cut(s) 148, 716, 999, 1102, 2665, 2727
BstUI CGCG 1 cut(s) 2298
BstV1I GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BstV2I GAAGAC 3 cut(s) 73, 719, 2428
BstX2I RGATCY 2 cut(s) 2653, 2744
BstXI CCANNNNNNTGG 2 cut(s) 214, 2333
BstYI RGATCY 2 cut(s) 2653, 2744
BsuRI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BtgI CCRYGG 1 cut(s) 2788
BtrI CACGTC 1 cut(s) 1199
BtsI GCAGTG 3 cut(s) 714, 2548, 2677
BtsIMutI CAGTG 8 cut(s) 13, 264, 714, 1017, 2173, 2275, 2548, 2677
BtuMI TCGCGA 1 cut(s) 2298
BveI ACCTGC 2 cut(s) 40, 829
Cac8I GCNNGC 7 cut(s) 123, 285, 1174, 1243, 1247, 2062, 2533
CaiI CAGNNNCTG 1 cut(s) 648
CciI TCATGA 2 cut(s) 1012, 1030
Cfr13I GGNCC 4 cut(s) 146, 665, 1318, 2802
CseI GACGC 1 cut(s) 713
Csp6I GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
CviQI GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
DdeI CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
DpnI GATC 6 cut(s) 246, 678, 1565, 2655, 2705, 2746
DpnII GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
DraI TTTAAA 1 cut(s) 273
DraIII CACNNNGTG 1 cut(s) 210
EaeI YGGCCR 2 cut(s) 1838, 2593
Eam1104I CTCTTC 4 cut(s) 746, 1800, 2493, 2842
EarI CTCTTC 4 cut(s) 746, 1800, 2493, 2842
Ecl136II GAGCTC 1 cut(s) 1158
Eco130I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Eco147I AGGCCT 1 cut(s) 1846
Eco24I GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
Eco31I GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
Eco32I GATATC 2 cut(s) 30, 2154
Eco47I GGWCC 3 cut(s) 146, 665, 1318
Eco53kI GAGCTC 1 cut(s) 1158
Eco57I CTGAAG 3 cut(s) 222, 644, 2517
EcoICRI GAGCTC 1 cut(s) 1158
EcoRI GAATTC 3 cut(s) 196, 451, 1413
EcoRII CCWGG 3 cut(s) 148, 1102, 2665
EcoRV GATATC 2 cut(s) 30, 2154
EcoT14I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
EcoT22I ATGCAT 2 cut(s) 2066, 2713
EcoT38I GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
ErhI CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Esp3I CGTCTC 1 cut(s) 696
FalI AAGNNNNNCTT 2 cut(s) 145, 177
FaqI GGGAC 2 cut(s) 678, 1331
FauI CCCGC 1 cut(s) 1165
FbaI TGATCA 2 cut(s) 1563, 2703
FblI GTMKAC 2 cut(s) 527, 1915
Fnu4HI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
FriOI GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
Fsp4HI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
FspBI CTAG 4 cut(s) 111, 591, 1410, 2282
GluI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
GsuI CTGGAG 2 cut(s) 1493, 2309
HaeIII GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
HapII CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
HgaI GACGC 1 cut(s) 713
HincII GTYRAC 2 cut(s) 850, 2438
HindII GTYRAC 2 cut(s) 850, 2438
HindIII AAGCTT 3 cut(s) 13, 234, 391
HinfI GANTC 7 cut(s) 437, 461, 775, 1009, 1861, 2225, 2809
HpaII CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
HpyAV CCTTC 8 cut(s) 316, 778, 857, 928, 1624, 1875, 2005, 2323
HpyCH4III ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
HpyCH4IV ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
HpyF3I CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
HpySE526I ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
Ksp22I TGATCA 2 cut(s) 1563, 2703
Kzo9I GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
LguI GCTCTTC 1 cut(s) 746
LmnI GCTCC 5 cut(s) 101, 184, 956, 1036, 2515
Lsp1109I GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
LweI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
MaeI CTAG 4 cut(s) 111, 591, 1410, 2282
MaeII ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
MaeIII GTNAC 6 cut(s) 725, 906, 1403, 1549, 1622, 2521
MalI GATC 6 cut(s) 246, 678, 1565, 2655, 2705, 2746
MbiI CCGCTC 2 cut(s) 179, 918
MboI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
MfeI CAATTG 2 cut(s) 579, 1312
MflI RGATCY 2 cut(s) 2653, 2744
MhlI GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
MlsI TGGCCA 1 cut(s) 1840
MluNI TGGCCA 1 cut(s) 1840
MlyI GAGTC 4 cut(s) 446, 455, 1018, 1870
MmeI TCCRAC 3 cut(s) 79, 1684, 2470
Mox20I TGGCCA 1 cut(s) 1840
Mph1103I ATGCAT 2 cut(s) 2066, 2713
MroXI GAANNNNTTC 3 cut(s) 15, 157, 2271
MscI TGGCCA 1 cut(s) 1840
MseI TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
MslI CAYNNNNRTG 2 cut(s) 1945, 2541
Msp20I TGGCCA 1 cut(s) 1840
MspA1I CMGCKG 2 cut(s) 347, 1079
MspCI CTTAAG 1 cut(s) 2303
MspI CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
MspR9I CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
MunI CAATTG 2 cut(s) 579, 1312
Mva1269I GAATGC 3 cut(s) 218, 840, 1026
MvaI CCWGG 3 cut(s) 150, 1104, 2667
MvnI CGCG 1 cut(s) 2298
NciI CCSGG 3 cut(s) 718, 1001, 2729
NdeII GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
NlaIV GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
NmuCI GTSAC 3 cut(s) 906, 1403, 1622
NruI TCGCGA 1 cut(s) 2298
NsiI ATGCAT 2 cut(s) 2066, 2713
NspI RCATGY 2 cut(s) 287, 2064
NspV TTCGAA 1 cut(s) 222
OliI CACNNNNGTG 1 cut(s) 2541
PaeI GCATGC 2 cut(s) 287, 2064
PagI TCATGA 2 cut(s) 1012, 1030
PaqCI CACCTGC 1 cut(s) 40
PceI AGGCCT 1 cut(s) 1846
PciSI GCTCTTC 1 cut(s) 746
PctI GAATGC 3 cut(s) 218, 840, 1026
PdmI GAANNNNTTC 3 cut(s) 15, 157, 2271
PfeI GAWTC 3 cut(s) 775, 2225, 2809
PflFI GACNNNGTC 1 cut(s) 1019
PkrI GCNGC 9 cut(s) 127, 187, 337, 520, 1081, 1614, 2202, 2245, 2692
Ple19I CGATCG 1 cut(s) 679
PleI GAGTC 4 cut(s) 445, 455, 1017, 1869
PpsI GAGTC 4 cut(s) 445, 455, 1017, 1869
PsiI TTATAA 2 cut(s) 1220, 2396
Psp124BI GAGCTC 1 cut(s) 1160
Psp6I CCWGG 3 cut(s) 148, 1102, 2665
PspGI CCWGG 3 cut(s) 148, 1102, 2665
PspN4I GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
PspPI GGNCC 4 cut(s) 146, 665, 1318, 2802
PstNI CAGNNNCTG 1 cut(s) 648
PsuI RGATCY 2 cut(s) 2653, 2744
PsyI GACNNNGTC 1 cut(s) 1019
PvuI CGATCG 1 cut(s) 679
PvuII CAGCTG 1 cut(s) 347
RruI TCGCGA 1 cut(s) 2298
RsaI GTAC 7 cut(s) 857, 1108, 1968, 1990, 2003, 2504, 2599
RsaNI GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
RseI CAYNNNNRTG 2 cut(s) 1945, 2541
SacI GAGCTC 1 cut(s) 1160
SapI GCTCTTC 1 cut(s) 746
SaqAI TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
SatI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
Sau3AI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
Sau96I GGNCC 4 cut(s) 146, 665, 1318, 2802
SchI GAGTC 4 cut(s) 446, 455, 1018, 1870
ScrFI CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
SduI GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
SfaNI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
SfuI TTCGAA 1 cut(s) 222
SinI GGWCC 3 cut(s) 146, 665, 1318
SmiI ATTTAAAT 1 cut(s) 273
SmiMI CAYNNNNRTG 2 cut(s) 1945, 2541
SmlI CTYRAG 2 cut(s) 231, 2303
SmoI CTYRAG 2 cut(s) 231, 2303
SphI GCATGC 2 cut(s) 287, 2064
SseBI AGGCCT 1 cut(s) 1846
SsiI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
SspI AATATT 3 cut(s) 490, 1646, 2317
SspMI CTAG 4 cut(s) 111, 591, 1410, 2282
SstI GAGCTC 1 cut(s) 1160
StuI AGGCCT 1 cut(s) 1846
StyD4I CCNGG 6 cut(s) 148, 716, 999, 1102, 2665, 2727
StyI CCWWGG 4 cut(s) 494, 1348, 1841, 2262
SwaI ATTTAAAT 1 cut(s) 273
TaaI ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
TaiI ACGT 6 cut(s) 991, 1201, 1921, 2145, 2663, 2740
TaqI TCGA 6 cut(s) 38, 222, 464, 1186, 2091, 2429
TatI WGTACW 3 cut(s) 855, 1966, 2502
TfiI GAWTC 3 cut(s) 775, 2225, 2809
Tru1I TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
Tru9I TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
TscAI CASTG 8 cut(s) 13, 271, 714, 1024, 2173, 2282, 2548, 2677
TseFI GTSAC 3 cut(s) 906, 1403, 1622
TseI GCWGC 9 cut(s) 125, 185, 335, 518, 1079, 1612, 2200, 2243, 2690
Tsp45I GTSAC 3 cut(s) 906, 1403, 1622
TspGWI ACGGA 1 cut(s) 2777
TspRI CASTG 8 cut(s) 13, 271, 714, 1024, 2173, 2282, 2548, 2677
Tth111I GACNNNGTC 1 cut(s) 1019
Vha464I CTTAAG 1 cut(s) 2303
VpaK11BI GGWCC 3 cut(s) 146, 665, 1318
XapI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
XceI RCATGY 2 cut(s) 287, 2064
XcmI CCANNNNNNNNNTGG 2 cut(s) 1577, 1809
XmiI GTMKAC 2 cut(s) 527, 1915
XmnI GAANNNNTTC 3 cut(s) 15, 157, 2271
XspI CTAG 4 cut(s) 111, 591, 1410, 2282
Zsp2I ATGCAT 2 cut(s) 2066, 2713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.