Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004421

Physical Location & Seq

Genomic Coordinates Reverse (-)

26969570 .. 26973749

Gene Structure 4180 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGTTGAAGGCGGAGGACTGCTCGAATTGGGGAGAGTTACCGGCCGTCGATGGATTTGCAGGAGAGGAATTTGACGAGGACGACGAGATGTGCATAGATGTCGACACGCTCTATCGCCTTCTCGATGAAGAACCCACGAGTTGTCCAGAGGAATTGTCATTGGAAAATCAATTGGACGCTGAAGAAGTTTCCTATGCTCAGCTCCTAAGTGGATCCCAAGCAGTAAAAGAAGAACCACCAATAGAAACTGATTTAATGGGTCCAGGCGCGTGGAATCATCCATACAGCTCAGAAGCTTTGCACTCTGGGGCAGGGGGTCCTGATGGCTCTTTTGATTATGAAGGGAACCTTGAAATGAATTTTGATTACAAAGAAATGCAACCATCAGCAAACACTGGTTCTCTTGGGCATACATACTCTACGAGTCTTAAAGACCGGTTTTCCTTGGTTCCAAGCGATGAGACTTGCTTTACAGAGAGGGTTGCAGTTTCACACCCATGTGGTATGTCATCTAGTTTTTCTGAAGGGCATGCCAACCATGTTTTGGACCACGGAGATCTGAATGTCCTGCAGAGGCAAGTTGATGTACCAGGGAAAGCTGAATCTGAATATGCTTCGCAGTGCCTCGATATCGAGAACATGGGCTTACGTTCCAGAACCTATTTCACTTTGGGACAAAATACCATGGAAACCTTAGGGCCATCTGAAAATAATTCCTGCACTTCTATGGAAATATCCTCTACTCTCTGTCAAAATTCTGATGTTTTCAGTGACCGTGACCCTTATACTGCTATGTGTGGCATGAGCTTAGATAATACATATTTCACTGATGTCTTAATGCATCATAGTCCTACCAGTTATTATTTTCTGAGTAATGAAGAAATGATGGCTAATGTGAAGGATGAATCAGGGGAGTTTCCAGCTGATAGTTCATGCTCAACTAGCAAGATGAATTTAAATGGTCAGGAGTTGATAACTGGTAGATCTGTTTTTGAGCCGTCAATGATTGATGTTTTAGATGGAAAGGAGTGGAATATGAGATATGGTAATTGTATGTCAGCAATCAGTGGAAATTCTTCATTCGATGCTGACTCTTTTCCTGTTGACAATAAGGCATCAGTTGAGCCTTTGAGTTCTACTCAGACATACATGTCAAGCAAAAAGAAAAGTATTGGTGTGAAGGATGAAAAGAATGATGAGTTTGTTGCTCCAAGTAGTGTTGTGTGTCATTCTTTTCGAGGCATGGATGAAGCTGTCAGTACCCAGTCTTCCTTTAGTGCTGATGATCACTTTTTTGAGAAAGACTTCAAGCAGTCTGGTTTTGGTATATCAACACAGAATCTTGGTAACTCATTAGATAATGAAGAAGTCACGATTGGTGCATGTGAGAGAGCTTGTCATTCTCAAGACATTAAGCATGGAAGTTCCACATCCCCTGTTGATGGACAATCTGTGAATTCAAATGCCTATTCTCGAGGTGCTCAGTCATTCACTTCATGCAAGAGTCAGGGTTACATGAAGAATATAGTCACTCATTCTAAGAGCATGCATCCTTCGAAAGTCAGCCCTGAATCAATTCATAGTAACTTCTCTGACAAATCCGCTGCAGAAGATGACGTTGATGTATGTATTATTGAACATATCAGTCATCCTGCACCCTCAAGTCGCTCTTCAGTGGTTAGCAATACTAATTACGCTGCGCCCATGAAACGGTCTCCAGCACTTGGAAATACTGTTGTTAATTCACAACAATTGATGCCAAGTGATCATTACGGAGGAGTGGGAGGCATGAGATTCAAGACACGAGATGAACAATTGGTTTTGCGAGTAGCATTGCAGGACCTATCACAGCCCAAGTCAGAAGCTATTCCACCAGATGGACTTTTGGCAGTTCCTCTGTTACGACATCAGAGAATTGCATTGTCATGGATGGTTCAGAAAGAGACAGCTAGTTTGCACTGTTCTGGAGGAATTCTTGCTGATCGATCAGGGATTGGGAAAGACAATATCGACAATTGCACTTATACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044764 GO:0045003 GO:0046483 GO:0050896 GO:0051704 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N zf-C3HC4 zf-C3HC4_2

Protein Analysis

677

Amino Acids

73.72

Weight (kDa)

4.56

Isoelectric Point (pI)

55.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G11100 AT1G61140 AT1G61140 AT1G61140
fragaria_vesca	FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580 FvH4_3g04580
malus_domestica	MD05G1322200.v1.1 MD10G1300200.v1.1
prunus_persica	Prupe.4G040600_v2.0.a1 Prupe.4G040600_v2.0.a1
pyrus_communis	pycom05g29650 pycom10g25290
rosa_chinensis	RchiOBHm_Chr5g0007521
rosa_laevigata	RLG00000031464
rosa_multiflora	Rmu_co8522595.1_g000001 Rmu_ssc0000182.1_g000011
rosa_roxburghii	Rroxscaffold_1G00068890
rosa_rugosa	Rorug04G0427800 Rorug04G0427900 Rorug04G0428000
rosa_samantha	Rh5AG055800 Rh5BG053400 Rh5CG063200 Rh5DG052400
rosa_wichuraiana	Rw5G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1150
AccB7I	CCANNNNNTGG	3 cut(s)	544, 1724, 1877
AccI	GTMKAC	1 cut(s)	102
AccII	CGCG	1 cut(s)	269
AciI	CCGC	2 cut(s)	11, 1602
AclWI	GGATC	2 cut(s)	207, 220
AcoI	YGGCCR	1 cut(s)	42
AcsI	RAATTY	7 cut(s)	68, 358, 754, 952, 1072, 1456, 1971
AcuI	CTGAAG	3 cut(s)	201, 543, 1656
AfaI	GTAC	2 cut(s)	588, 1261
AfiI	CCNNNNNNNGG	5 cut(s)	544, 1442, 1710, 1724, 1877
AflIII	ACRYGT	1 cut(s)	1149
AgeI	ACCGGT	1 cut(s)	435
AgsI	TTSAA	6 cut(s)	7, 353, 1309, 1461, 1637, 1798
AjnI	CCWGG	2 cut(s)	262, 589
AjuI	GAANNNNNNNTTGG	2 cut(s)	1359, 1391
AleI	CACNNNNGTG	1 cut(s)	498
Alw21I	GWGCWC	1 cut(s)	1483
Alw26I	GTCTC	3 cut(s)	455, 1719, 1937
AlwI	GGATC	2 cut(s)	207, 220
Ama87I	CYCGRG	1 cut(s)	1473
AoxI	GGCC	2 cut(s)	42, 698
ApeKI	GCWGC	2 cut(s)	1604, 1697
ApoI	RAATTY	7 cut(s)	68, 358, 754, 952, 1072, 1456, 1971
ArsI	GACNNNNNNTTYG	2 cut(s)	1936, 1968
AsiGI	ACCGGT	1 cut(s)	435
Asp700I	GAANNNNTTC	4 cut(s)	1075, 1304, 1575, 1866
AspLEI	GCGC	2 cut(s)	269, 1702
AspS9I	GGNCC	5 cut(s)	260, 317, 547, 698, 1840
AsuII	TTCGAA	1 cut(s)	1556
AvaI	CYCGRG	1 cut(s)	1473
AvaII	GGWCC	4 cut(s)	260, 317, 547, 1840
AxyI	CCTNAGG	1 cut(s)	694
BamHI	GGATCC	1 cut(s)	212
BarI	GAAGNNNNNNTAC	2 cut(s)	1252, 1284
BauI	CACGAG	2 cut(s)	136, 1803
BbsI	GAAGAC	1 cut(s)	1260
Bbv12I	GWGCWC	1 cut(s)	1483
BbvI	GCAGC	2 cut(s)	1591, 1684
BccI	CCATC	9 cut(s)	44, 317, 391, 709, 880, 1013, 1436, 1871, 1924
BceAI	ACGGC	2 cut(s)	29, 982
BcgI	CGANNNNNNTGC	4 cut(s)	38, 72, 82, 116
BciT130I	CCWGG	2 cut(s)	264, 591
BclI	TGATCA	2 cut(s)	1285, 1765
BcoDI	GTCTC	3 cut(s)	455, 1719, 1937
BfaI	CTAG	3 cut(s)	513, 942, 1950
BfmI	CTRYAG	2 cut(s)	569, 1605
BglII	AGATCT	2 cut(s)	556, 983
BisI	GCNGC	2 cut(s)	1605, 1698
BlpI	GCTNAGC	1 cut(s)	198
BlsI	GCNGC	2 cut(s)	1606, 1699
Bme1390I	CCNGG	2 cut(s)	264, 591
Bme18I	GGWCC	4 cut(s)	260, 317, 547, 1840
BmeT110I	CYCGRG	1 cut(s)	1473
BmgT120I	GGNCC	5 cut(s)	260, 317, 547, 698, 1840
BmiI	GGNNCC	5 cut(s)	214, 261, 318, 347, 450
BmrFI	CCNGG	2 cut(s)	264, 591
BmrI	ACTGGG	1 cut(s)	1258
BmsI	GCATC	5 cut(s)	850, 1075, 1124, 1558, 1746
BmuI	ACTGGG	1 cut(s)	1258
BpiI	GAAGAC	1 cut(s)	1260
BplI	GAGNNNNNCTC	3 cut(s)	37, 1123, 1155
BpmI	CTGGAG	2 cut(s)	1701, 1986
Bpu1102I	GCTNAGC	1 cut(s)	198
Bpu14I	TTCGAA	1 cut(s)	1556
BpuEI	CTTGAG	2 cut(s)	1389, 1645
Bsa29I	ATCGAT	1 cut(s)	1984
BsaI	GGTCTC	1 cut(s)	1719
BsaJI	CCNNGG	4 cut(s)	444, 550, 590, 684
BsaWI	WCCGGW	1 cut(s)	435
Bsc4I	CCNNNNNNNGG	5 cut(s)	544, 1442, 1710, 1724, 1877
Bse118I	RCCGGY	2 cut(s)	40, 435
Bse1I	ACTGG	4 cut(s)	400, 855, 982, 1264
Bse21I	CCTNAGG	1 cut(s)	694
Bse3DI	GCAATG	1 cut(s)	1832
BseBI	CCWGG	2 cut(s)	264, 591
BseCI	ATCGAT	1 cut(s)	1984
BseDI	CCNNGG	4 cut(s)	444, 550, 590, 684
BseGI	GGATG	8 cut(s)	277, 907, 1189, 1252, 1430, 1549, 1648, 1935
BseLI	CCNNNNNNNGG	5 cut(s)	544, 1442, 1710, 1724, 1877
BseMI	GCAATG	1 cut(s)	1832
BseMII	CTCAG	5 cut(s)	212, 303, 860, 1154, 1496
BseNI	ACTGG	4 cut(s)	400, 855, 982, 1264
BseRI	GAGGAG	1 cut(s)	1791
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	2 cut(s)	1591, 1684
BsgI	GTGCAG	2 cut(s)	703, 1638
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	45
BshFI	GGCC	2 cut(s)	44, 700
BshTI	ACCGGT	1 cut(s)	435
BshVI	ATCGAT	1 cut(s)	1984
BsiEI	CGRYCG	1 cut(s)	45
BsiHKAI	GWGCWC	1 cut(s)	1483
BsiHKCI	CYCGRG	1 cut(s)	1473
BsiSI	CCGG	2 cut(s)	41, 436
BslFI	GGGAC	1 cut(s)	687
BslI	CCNNNNNNNGG	5 cut(s)	544, 1442, 1710, 1724, 1877
BsmAI	GTCTC	3 cut(s)	455, 1719, 1937
BsmFI	GGGAC	1 cut(s)	687
BsnI	GGCC	2 cut(s)	44, 700
Bso31I	GGTCTC	1 cut(s)	1719
BsoBI	CYCGRG	1 cut(s)	1473
Bsp119I	TTCGAA	1 cut(s)	1556
Bsp1286I	GDGCHC	1 cut(s)	1483
Bsp143I	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
Bsp1720I	GCTNAGC	1 cut(s)	198
Bsp19I	CCATGG	1 cut(s)	684
BspACI	CCGC	2 cut(s)	11, 1602
BspANI	GGCC	2 cut(s)	44, 700
BspCNI	CTCAG	5 cut(s)	211, 302, 861, 1153, 1495
BspDI	ATCGAT	1 cut(s)	1984
BspFNI	CGCG	1 cut(s)	269
BspLI	GGNNCC	5 cut(s)	214, 261, 318, 347, 450
BspMAI	CTGCAG	2 cut(s)	573, 1609
BspPI	GGATC	2 cut(s)	207, 220
BspQI	GCTCTTC	1 cut(s)	1675
BspT104I	TTCGAA	1 cut(s)	1556
BspTNI	GGTCTC	1 cut(s)	1719
BsrDI	GCAATG	1 cut(s)	1832
BsrFI	RCCGGY	2 cut(s)	40, 435
BsrI	ACTGG	4 cut(s)	400, 855, 982, 1264
BssAI	RCCGGY	2 cut(s)	40, 435
BssECI	CCNNGG	4 cut(s)	444, 550, 590, 684
BssMI	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
BssSI	CACGAG	2 cut(s)	136, 1803
BssT1I	CCWWGG	2 cut(s)	444, 684
Bst2BI	CACGAG	2 cut(s)	136, 1803
Bst2UI	CCWGG	2 cut(s)	264, 591
Bst4CI	ACNGT	4 cut(s)	776, 1713, 1735, 1961
Bst6I	CTCTTC	1 cut(s)	1675
BstBI	TTCGAA	1 cut(s)	1556
BstC8I	GCNNGC	2 cut(s)	531, 1547
BstDEI	CTNAG	9 cut(s)	198, 206, 289, 694, 808, 869, 1140, 1482, 1539
BstDSI	CCRYGG	2 cut(s)	550, 684
BstF5I	GGATG	8 cut(s)	277, 907, 1189, 1252, 1430, 1549, 1648, 1935
BstFNI	CGCG	1 cut(s)	269
BstHHI	GCGC	2 cut(s)	269, 1702
BstKTI	GATC	7 cut(s)	215, 559, 986, 1288, 1768, 1984, 1988
BstMAI	GTCTC	3 cut(s)	455, 1719, 1937
BstMBI	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
BstMCI	CGRYCG	1 cut(s)	45
BstMWI	GCNNNNNNNGC	1 cut(s)	942
BstNI	CCWGG	2 cut(s)	264, 591
BstNSI	RCATGY	4 cut(s)	533, 1153, 1386, 1549
BstSCI	CCNGG	2 cut(s)	262, 589
BstSFI	CTRYAG	2 cut(s)	569, 1605
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	2 cut(s)	1591, 1684
BstV2I	GAAGAC	1 cut(s)	1260
BstX2I	RGATCY	3 cut(s)	212, 556, 983
BstXI	CCANNNNNNTGG	1 cut(s)	270
BstYI	RGATCY	3 cut(s)	212, 556, 983
BstZI	CGGCCG	1 cut(s)	42
Bsu15I	ATCGAT	1 cut(s)	1984
Bsu36I	CCTNAGG	1 cut(s)	694
BsuRI	GGCC	2 cut(s)	44, 700
BsuTUI	ATCGAT	1 cut(s)	1984
BtgI	CCRYGG	2 cut(s)	550, 684
BtgZI	GCGATG	1 cut(s)	471
BtsCI	GGATG	8 cut(s)	277, 907, 1189, 1252, 1430, 1549, 1648, 1935
BtsI	GCAGTG	1 cut(s)	626
BtsIMutI	CAGTG	7 cut(s)	393, 626, 775, 825, 1072, 1680, 1957
Cac8I	GCNNGC	2 cut(s)	531, 1547
CfoI	GCGC	2 cut(s)	269, 1702
Cfr10I	RCCGGY	2 cut(s)	40, 435
Cfr13I	GGNCC	5 cut(s)	260, 317, 547, 698, 1840
ClaI	ATCGAT	1 cut(s)	1984
CseI	GACGC	1 cut(s)	185
Csp6I	GTAC	2 cut(s)	587, 1260
CspAI	ACCGGT	1 cut(s)	435
CviQI	GTAC	2 cut(s)	587, 1260
DdeI	CTNAG	9 cut(s)	198, 206, 289, 694, 808, 869, 1140, 1482, 1539
DpnI	GATC	7 cut(s)	214, 558, 985, 1287, 1767, 1983, 1987
DpnII	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
DraI	TTTAAA	1 cut(s)	957
DrdI	GACNNNNNNGTC	1 cut(s)	1150
DseDI	GACNNNNNNGTC	1 cut(s)	1150
EaeI	YGGCCR	1 cut(s)	42
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	1 cut(s)	1675
EarI	CTCTTC	1 cut(s)	1675
EciI	GGCGGA	1 cut(s)	26
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	2 cut(s)	444, 684
Eco31I	GGTCTC	1 cut(s)	1719
Eco32I	GATATC	1 cut(s)	631
Eco47I	GGWCC	4 cut(s)	260, 317, 547, 1840
Eco52I	CGGCCG	1 cut(s)	42
Eco57I	CTGAAG	3 cut(s)	201, 543, 1656
Eco81I	CCTNAGG	1 cut(s)	694
Eco88I	CYCGRG	1 cut(s)	1473
EcoO109I	RGGNCCY	2 cut(s)	317, 1840
EcoRI	GAATTC	2 cut(s)	1456, 1971
EcoRII	CCWGG	2 cut(s)	262, 589
EcoRV	GATATC	1 cut(s)	631
EcoT14I	CCWWGG	2 cut(s)	444, 684
EcoT22I	ATGCAT	2 cut(s)	843, 1551
ErhI	CCWWGG	2 cut(s)	444, 684
FalI	AAGNNNNNCTT	4 cut(s)	333, 365, 1654, 1686
FaqI	GGGAC	1 cut(s)	687
FbaI	TGATCA	2 cut(s)	1285, 1765
FblI	GTMKAC	1 cut(s)	102
Fnu4HI	GCNGC	2 cut(s)	1605, 1698
FokI	GGATG	8 cut(s)	264, 914, 1196, 1259, 1417, 1536, 1635, 1942
Fsp4HI	GCNGC	2 cut(s)	1605, 1698
FspBI	CTAG	3 cut(s)	513, 942, 1950
GlaI	GCGC	2 cut(s)	268, 1701
GluI	GCNGC	2 cut(s)	1605, 1698
GsuI	CTGGAG	2 cut(s)	1701, 1986
HaeIII	GGCC	2 cut(s)	44, 700
HapII	CCGG	2 cut(s)	41, 436
HgaI	GACGC	1 cut(s)	185
HhaI	GCGC	2 cut(s)	269, 1702
Hin6I	GCGC	2 cut(s)	267, 1700
HinP1I	GCGC	2 cut(s)	267, 1700
HincII	GTYRAC	2 cut(s)	103, 1105
HindII	GTYRAC	2 cut(s)	103, 1105
HindIII	AAGCTT	1 cut(s)	294
HinfI	GANTC	9 cut(s)	274, 424, 602, 905, 1091, 1339, 1504, 1571, 1794
HpaII	CCGG	2 cut(s)	41, 436
Hpy166II	GTNNAC	2 cut(s)	103, 1105
Hpy8I	GTNNAC	2 cut(s)	103, 1105
Hpy99I	CGWCG	2 cut(s)	50, 86
HpyAV	CCTTC	6 cut(s)	128, 335, 518, 892, 1174, 1563
HpyCH4III	ACNGT	4 cut(s)	776, 1713, 1735, 1961
HpyCH4IV	ACGT	2 cut(s)	649, 1617
HpyF10VI	GCNNNNNNNGC	1 cut(s)	942
HpyF3I	CTNAG	9 cut(s)	198, 206, 289, 694, 808, 869, 1140, 1482, 1539
HpySE526I	ACGT	2 cut(s)	649, 1617
HspAI	GCGC	2 cut(s)	267, 1700
Ksp22I	TGATCA	2 cut(s)	1285, 1765
Kzo9I	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
LguI	GCTCTTC	1 cut(s)	1675
LmnI	GCTCC	2 cut(s)	207, 1213
Lsp1109I	GCAGC	2 cut(s)	1591, 1684
LweI	GCATC	5 cut(s)	850, 1075, 1124, 1558, 1746
MaeI	CTAG	3 cut(s)	513, 942, 1950
MaeII	ACGT	2 cut(s)	649, 1617
MaeIII	GTNAC	9 cut(s)	36, 770, 776, 1346, 1369, 1511, 1528, 1583, 1899
MalI	GATC	7 cut(s)	214, 558, 985, 1287, 1767, 1983, 1987
MboI	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
MfeI	CAATTG	4 cut(s)	170, 1751, 1814, 2014
MflI	RGATCY	3 cut(s)	212, 556, 983
MhlI	GDGCHC	1 cut(s)	1483
MlyI	GAGTC	3 cut(s)	433, 1085, 1513
Mph1103I	ATGCAT	2 cut(s)	843, 1551
MroXI	GAANNNNTTC	4 cut(s)	1075, 1304, 1575, 1866
MseI	TTAA	7 cut(s)	254, 429, 836, 956, 1413, 1740, 2029
MslI	CAYNNNNRTG	4 cut(s)	496, 498, 725, 1924
MspA1I	CMGCKG	2 cut(s)	923, 1604
MspI	CCGG	2 cut(s)	41, 436
MspR9I	CCNGG	2 cut(s)	264, 591
MunI	CAATTG	4 cut(s)	170, 1751, 1814, 2014
MvaI	CCWGG	2 cut(s)	264, 591
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	1 cut(s)	942
NcoI	CCATGG	1 cut(s)	684
NdeII	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
NlaIV	GGNNCC	5 cut(s)	214, 261, 318, 347, 450
NmuCI	GTSAC	4 cut(s)	770, 776, 1369, 1528
NsiI	ATGCAT	2 cut(s)	843, 1551
NspI	RCATGY	4 cut(s)	533, 1153, 1386, 1549
NspV	TTCGAA	1 cut(s)	1556
OliI	CACNNNNGTG	1 cut(s)	498
PaeI	GCATGC	2 cut(s)	533, 1549
PaeR7I	CTCGAG	1 cut(s)	1473
PciI	ACATGT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	1675
PcsI	WCGNNNNNNNCGW	1 cut(s)	81
PdmI	GAANNNNTTC	4 cut(s)	1075, 1304, 1575, 1866
PfeI	GAWTC	6 cut(s)	274, 602, 905, 1339, 1571, 1794
PflMI	CCANNNNNTGG	3 cut(s)	544, 1724, 1877
PinAI	ACCGGT	1 cut(s)	435
PkrI	GCNGC	2 cut(s)	1606, 1699
PleI	GAGTC	3 cut(s)	432, 1085, 1512
PpsI	GAGTC	3 cut(s)	432, 1085, 1512
PpuMI	RGGWCCY	2 cut(s)	317, 1840
PscI	ACATGT	1 cut(s)	1149
Psp5II	RGGWCCY	2 cut(s)	317, 1840
Psp6I	CCWGG	2 cut(s)	262, 589
PspGI	CCWGG	2 cut(s)	262, 589
PspN4I	GGNNCC	5 cut(s)	214, 261, 318, 347, 450
PspPI	GGNCC	5 cut(s)	260, 317, 547, 698, 1840
PspPPI	RGGWCCY	2 cut(s)	317, 1840
PstI	CTGCAG	2 cut(s)	573, 1609
PsuI	RGATCY	3 cut(s)	212, 556, 983
PvuII	CAGCTG	1 cut(s)	923
RsaI	GTAC	2 cut(s)	588, 1261
RsaNI	GTAC	2 cut(s)	587, 1260
RseI	CAYNNNNRTG	4 cut(s)	496, 498, 725, 1924
SalI	GTCGAC	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	1675
SaqAI	TTAA	7 cut(s)	254, 429, 836, 956, 1413, 1740, 2029
SatI	GCNGC	2 cut(s)	1605, 1698
Sau3AI	GATC	7 cut(s)	212, 556, 983, 1285, 1765, 1981, 1985
Sau96I	GGNCC	5 cut(s)	260, 317, 547, 698, 1840
SchI	GAGTC	3 cut(s)	433, 1085, 1513
ScrFI	CCNGG	2 cut(s)	264, 591
SduI	GDGCHC	1 cut(s)	1483
SfaNI	GCATC	5 cut(s)	850, 1075, 1124, 1558, 1746
SfcI	CTRYAG	2 cut(s)	569, 1605
Sfr274I	CTCGAG	1 cut(s)	1473
SfuI	TTCGAA	1 cut(s)	1556
SinI	GGWCC	4 cut(s)	260, 317, 547, 1840
SlaI	CTCGAG	1 cut(s)	1473
SmiI	ATTTAAAT	1 cut(s)	957
SmiMI	CAYNNNNRTG	4 cut(s)	496, 498, 725, 1924
SmlI	CTYRAG	3 cut(s)	1404, 1473, 1660
SmoI	CTYRAG	3 cut(s)	1404, 1473, 1660
SphI	GCATGC	2 cut(s)	533, 1549
SsiI	CCGC	2 cut(s)	11, 1602
SspMI	CTAG	3 cut(s)	513, 942, 1950
StyD4I	CCNGG	2 cut(s)	262, 589
StyI	CCWWGG	2 cut(s)	444, 684
SwaI	ATTTAAAT	1 cut(s)	957
TaaI	ACNGT	4 cut(s)	776, 1713, 1735, 1961
TaiI	ACGT	2 cut(s)	652, 1620
TfiI	GAWTC	6 cut(s)	274, 602, 905, 1339, 1571, 1794
Tru1I	TTAA	7 cut(s)	254, 429, 836, 956, 1413, 1740, 2029
Tru9I	TTAA	7 cut(s)	254, 429, 836, 956, 1413, 1740, 2029
TscAI	CASTG	7 cut(s)	400, 626, 775, 832, 1072, 1680, 1964
TseFI	GTSAC	4 cut(s)	770, 776, 1369, 1528
TseI	GCWGC	2 cut(s)	1604, 1697
Tsp45I	GTSAC	4 cut(s)	770, 776, 1369, 1528
TspGWI	ACGGA	2 cut(s)	567, 1788
TspRI	CASTG	7 cut(s)	400, 626, 775, 832, 1072, 1680, 1964
Van91I	CCANNNNNTGG	3 cut(s)	544, 1724, 1877
VpaK11BI	GGWCC	4 cut(s)	260, 317, 547, 1840
XapI	RAATTY	7 cut(s)	68, 358, 754, 952, 1072, 1456, 1971
XceI	RCATGY	4 cut(s)	533, 1153, 1386, 1549
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XhoI	CTCGAG	1 cut(s)	1473
XmiI	GTMKAC	1 cut(s)	102
XmnI	GAANNNNTTC	4 cut(s)	1075, 1304, 1575, 1866
XspI	CTAG	3 cut(s)	513, 942, 1950
Zsp2I	ATGCAT	2 cut(s)	843, 1551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.