Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010258

Physical Location & Seq

Genomic Coordinates Forward (+)

27947073 .. 27951659

Gene Structure 4587 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGCATTCCCCAATGGATCACCGTCTGATGGGATATTTGGTTCCTCTCAATGCCAAGCTAGAAGAAGACGCTTCACTCCCAAAAATACCCCTCTCCCGAGGCCCGAATTACATCGGCCGCAACACCACCGCTTCCCTCTCCGACAAACGACTCAGCCGGAAGCACCTCGCTCTCACTATCGATGCTAGTGATTCCGCCGTTTTGGTCGTGGAGGGGACAAATCCCATTGTTGTGAAATCCGGGAGTAACAGGAAGAAATTGTTTCCGAAAGAAAATGCAACGATATGCAATGGTGATGTTATAGAGCTGATTCCGGGGCATTTTCTTTTCGAGTATAAGACATTGTCTGATAATGAAAATGGAAATAATGTGCGTGTTGTCTGTGACCATAAGAGGGGATCAAATGATGGTGGAAAGGCCGGTGAAGTTGAAGAATTGACTCGAAAGAGGCCACGTCAACTAGTGTCTCAAGATAAAGGTTCCGAAAGGAGTTTTAAGGCTGAGGTGGAAGGAAGCAGCTCGGGGGCTGATAGAGACGGTGGCAGTGTGGAGGCCATACGCCATTTTTGTGTTCCTAATGATCAATTACCACAGACCTTTCGGCTTTTGAATGTGCAAGGACTCCCCCCATGGGCAAATACCTCTTGTGTTTCTATAAGGGATTTGATTCAGGGGGACATTCTTGTTGCTATCCTTTCCAATTACATGGTAGACATCGATTGGTTGATCCCTGCATGCCCATCAATTGCCAAAGTTCCACATGTGTTGGTTATTCATGGTGAGGGTGATGGTACACTGGATTACATGAAGAGAAAGAAGCCTGCGAACTGGATTCTACACAAACCACCATTGCCCATTTCATTTGGTACACACCATTCAAAGGCCATGATTCTTGTTTACCCTCGAGGAGTGAGAATCATTGTACATACAGCAAACTATATACATGTTGACTGGAACAACAAAAGCCAAGGTTTGTGGATGCAGGACTTTCCCTGGAAAGATCAAAATAATCCAAGCAAAGGATGTGGATTCGAAAGTGACTTAATCGATTATCTCAGTGCACTTAAGTGGCCTGAGTTTTCAGTTAATTTTCCTAATCTGGGTAGCTTCAAGATCAATCCATCATTTTTCAAGAAGTTTGATTACAGTGATGCAGCAGTGAGGCTAATTGCATCTGTCCCTGGATATCATACGGGTAATAACATGAAAAAGTGGGGGCATATGAAGCTTCGCACTGTTCTTCAGGAGTGTATTTTTGATAAAGAGTTTCGGAAATCTCCTCTTGCTTATCAGTTCTCCTCCCTGGGTTCTTTGGACGAGAAGTGGATGGCTGAGTTTATGTCTTCAATGTCATCAGGCTTATCGGAAGATAGAACTCCTCTCGGTCCTGGGCAGCCACTCATAATATGGCCTACAGTAGAAGATGTCAGATGCTCTTTAGAGGGCTATGCAGCTGGAAATGCCATTCCAAGTCCACTAAAGAATGTGGAGAAAGACTTCTTGAAAAAGTACTGGGCTAAATGGAGGGCAAGCCATACCGGCCGCTGTCGTGCAATGCCACATATAAAAACATTCGTGCGTTATAATGGTCAGAAACTTGCTTGGTTTTTGCTAACTTCAGCAAATCTTAGCAAGGCTGCCTGGGGCGCTCTCCAGAAGAACAACTCACAGTTGATGATCCGTTCTTATGAGCTGGGAATTCTATTTCTACCACGTAAAACATGCAGTTTTGGGTTTTCTTGTACGAGCAATGGGGTTCCATCTAAGGATAAATCTGGACGGTCAGAAACTTCTGAAGCATCGAGAACAACACTCGTGACTCTGAACTGGCAAGGAAACAGGAATACAGATTCTTCATCTGAAGTAATTAAATTGCCCGTGCCTTATGAACTCCCTCCTCAGCCATACACCGCGGAAGATGTGCCTTGGTCTTGGGACCGGCGGTATAACAAGAAAGATGTTTACGGTCAAGTTTGGCCGCGACATGTTCAGCTGTATGCTGCTCAAGACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000012 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008081 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0017005 GO:0033554 GO:0034641 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0070259 GO:0071704 GO:0071944 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA Tyr-DNA_phospho

Protein Analysis

672

Amino Acids

75.37

Weight (kDa)

9.15

Isoelectric Point (pI)

40.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tyr-DNA_phospho	PF06087	200 - 637	1.9e-101	Tyrosyl-DNA phosphodiesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15170
fragaria_vesca	FvH4_3g02650 FvH4_3g02650
malus_domestica	MD10G1314700.v1.1
prunus_persica	Prupe.4G026100_v2.0.a1 Prupe.4G026100_v2.0.a1
pyrus_communis	pycom10g26680
rosa_chinensis	RchiOBHm_Chr5g0003961
rosa_laevigata	RLG00000031190 RLG00000031192
rosa_multiflora	Rmu_sc0000547.1_g000008
rosa_roxburghii	Rroxscaffold_1G00072010
rosa_rugosa	Rorug04G0408200.1 Rorug04G0408300.1 Rorug04G0408400 Rorug04G0408500
rosa_samantha	Rh5AG036200 Rh5BG035100 Rh5CG038800 Rh5DG034700
rosa_wichuraiana	Rw5G003300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1584
AbsI	CCTCGAGG	1 cut(s)	903
AccI	GTMKAC	1 cut(s)	711
AccII	CGCG	2 cut(s)	1913, 1981
AciI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
AclWI	GGATC	4 cut(s)	24, 406, 721, 1672
AcoI	YGGCCR	3 cut(s)	115, 1540, 1976
AcsI	RAATTY	1 cut(s)	1698
AcuI	CTGAAG	4 cut(s)	1226, 1602, 1815, 1881
AfaI	GTAC	5 cut(s)	793, 868, 924, 1511, 1744
AfiI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
AflII	CTTAAG	1 cut(s)	1064
AflIII	ACRYGT	3 cut(s)	760, 943, 1984
AgsI	TTSAA	7 cut(s)	431, 610, 879, 1111, 1132, 1347, 1504
AhlI	ACTAGT	1 cut(s)	460
AjiI	CACGTC	1 cut(s)	455
AjnI	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
AleI	CACNNNNGTG	1 cut(s)	1066
AloI	GAACNNNNNNTCC	2 cut(s)	24, 56
AluBI	AGCT	8 cut(s)	58, 307, 519, 1107, 1228, 1454, 1693, 1993
AluI	AGCT	8 cut(s)	58, 307, 519, 1107, 1228, 1454, 1693, 1993
Alw21I	GWGCWC	1 cut(s)	1063
Alw26I	GTCTC	2 cut(s)	471, 528
Alw44I	GTGCAC	1 cut(s)	1059
AlwI	GGATC	4 cut(s)	24, 406, 721, 1672
Ama87I	CYCGRG	3 cut(s)	96, 520, 903
ApaLI	GTGCAC	1 cut(s)	1059
ApeKI	GCWGC	6 cut(s)	516, 1154, 1393, 1451, 1637, 2000
ApoI	RAATTY	1 cut(s)	1698
Asp700I	GAANNNNTTC	1 cut(s)	1496
AspLEI	GCGC	1 cut(s)	1649
AspS9I	GGNCC	3 cut(s)	101, 1385, 1936
AsuC2I	CCSGG	2 cut(s)	241, 315
AsuHPI	GGTGA	5 cut(s)	11, 305, 434, 791, 797
AsuII	TTCGAA	1 cut(s)	1032
AvaI	CYCGRG	3 cut(s)	96, 520, 903
AvaII	GGWCC	2 cut(s)	1385, 1936
BaeGI	GKGCMC	1 cut(s)	1063
BarI	GAAGNNNNNNTAC	2 cut(s)	1127, 1159
BauI	CACGAG	1 cut(s)	1814
BbsI	GAAGAC	2 cut(s)	72, 1335
Bbv12I	GWGCWC	1 cut(s)	1063
BbvCI	CCTCAGC	2 cut(s)	501, 1899
BbvI	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BccI	CCATC	7 cut(s)	22, 401, 748, 782, 1129, 1321, 1768
BceAI	ACGGC	1 cut(s)	182
BciT130I	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BclI	TGATCA	1 cut(s)	580
BcnI	CCSGG	2 cut(s)	241, 315
BcoDI	GTCTC	2 cut(s)	471, 528
BcuI	ACTAGT	1 cut(s)	460
BfaI	CTAG	3 cut(s)	59, 186, 461
BfmI	CTRYAG	1 cut(s)	1413
BfoI	RGCGCY	1 cut(s)	1650
BfrI	CTTAAG	1 cut(s)	1064
BglI	GCCNNNNNGGC	1 cut(s)	1539
BisI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
BlsI	GCNGC	9 cut(s)	119, 518, 1156, 1395, 1453, 1544, 1639, 1980, 2002
BmcAI	AGTACT	1 cut(s)	1511
Bme1390I	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
Bme18I	GGWCC	2 cut(s)	1385, 1936
BmeT110I	CYCGRG	3 cut(s)	96, 520, 903
BmgBI	CACGTC	1 cut(s)	455
BmgT120I	GGNCC	3 cut(s)	101, 1385, 1936
BmiI	GGNNCC	4 cut(s)	42, 481, 1758, 1937
BmrFI	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
BmrI	ACTGGG	1 cut(s)	1522
BmsI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
BmuI	ACTGGG	1 cut(s)	1522
BpiI	GAAGAC	2 cut(s)	72, 1335
BpmI	CTGGAG	1 cut(s)	1637
Bpu10I	CCTNAGC	2 cut(s)	501, 1899
Bpu14I	TTCGAA	1 cut(s)	1032
BpuEI	CTTGAG	2 cut(s)	453, 1989
BpuMI	CCSGG	2 cut(s)	241, 315
Bsa29I	ATCGAT	3 cut(s)	180, 717, 1047
BsaAI	YACGTR	1 cut(s)	1715
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
Bse118I	RCCGGY	3 cut(s)	419, 1538, 1938
Bse1I	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
Bse3DI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BseBI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BseCI	ATCGAT	3 cut(s)	180, 717, 1047
BseGI	GGATG	3 cut(s)	984, 1028, 1332
BseLI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
BseMI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BseMII	CTCAG	6 cut(s)	166, 492, 1065, 1069, 1323, 1913
BseNI	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
BseRI	GAGGAG	5 cut(s)	921, 1269, 1288, 1368, 1887
BseSI	GKGCMC	1 cut(s)	1063
BseX3I	CGGCCG	2 cut(s)	115, 1540
BseXI	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BseYI	CCCAGC	1 cut(s)	1693
Bsh1236I	CGCG	2 cut(s)	1913, 1981
Bsh1285I	CGRYCG	2 cut(s)	118, 1543
BshVI	ATCGAT	3 cut(s)	180, 717, 1047
BsiEI	CGRYCG	2 cut(s)	118, 1543
BsiHKAI	GWGCWC	1 cut(s)	1063
BsiHKCI	CYCGRG	3 cut(s)	96, 520, 903
BsiSI	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
BslFI	GGGAC	4 cut(s)	229, 689, 1163, 1949
BslI	CCNNNNNNNGG	6 cut(s)	28, 394, 631, 880, 1019, 1100
BsmAI	GTCTC	2 cut(s)	471, 528
BsmBI	CGTCTC	1 cut(s)	528
BsmFI	GGGAC	4 cut(s)	229, 689, 1163, 1949
BsmI	GAATGC	1 cut(s)	4
BsoBI	CYCGRG	3 cut(s)	96, 520, 903
Bsp119I	TTCGAA	1 cut(s)	1032
Bsp1286I	GDGCHC	1 cut(s)	1063
Bsp1407I	TGTACA	1 cut(s)	922
Bsp143I	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Bsp19I	CCATGG	1 cut(s)	629
BspACI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
BspCNI	CTCAG	6 cut(s)	165, 493, 1066, 1068, 1324, 1912
BspDI	ATCGAT	3 cut(s)	180, 717, 1047
BspFNI	CGCG	2 cut(s)	1913, 1981
BspLI	GGNNCC	4 cut(s)	42, 481, 1758, 1937
BspPI	GGATC	4 cut(s)	24, 406, 721, 1672
BspT104I	TTCGAA	1 cut(s)	1032
BspTI	CTTAAG	1 cut(s)	1064
BsrDI	GCAATG	4 cut(s)	295, 848, 1560, 1756
BsrFI	RCCGGY	3 cut(s)	419, 1538, 1938
BsrGI	TGTACA	1 cut(s)	922
BsrI	ACTGG	5 cut(s)	801, 833, 956, 1517, 1832
BssAI	RCCGGY	3 cut(s)	419, 1538, 1938
BssMI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
BssSI	CACGAG	1 cut(s)	1814
BssT1I	CCWWGG	3 cut(s)	629, 967, 1925
Bst2BI	CACGAG	1 cut(s)	1814
Bst2UI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
Bst4CI	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
Bst6I	CTCTTC	1 cut(s)	803
BstAFI	CTTAAG	1 cut(s)	1064
BstAUI	TGTACA	1 cut(s)	922
BstBAI	YACGTR	1 cut(s)	1715
BstBI	TTCGAA	1 cut(s)	1032
BstC8I	GCNNGC	3 cut(s)	736, 822, 1531
BstDEI	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
BstDSI	CCRYGG	2 cut(s)	629, 1911
BstF5I	GGATG	3 cut(s)	984, 1028, 1332
BstFNI	CGCG	2 cut(s)	1913, 1981
BstH2I	RGCGCY	1 cut(s)	1650
BstHHI	GCGC	1 cut(s)	1649
BstKTI	GATC	7 cut(s)	19, 401, 583, 729, 1003, 1116, 1680
BstMAI	GTCTC	2 cut(s)	471, 528
BstMBI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
BstMCI	CGRYCG	2 cut(s)	118, 1543
BstMWI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
BstNI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
BstNSI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
BstSCI	CCNGG	7 cut(s)	239, 313, 992, 1180, 1302, 1387, 1640
BstSFI	CTRYAG	1 cut(s)	1413
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	2 cut(s)	1913, 1981
BstV1I	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
BstV2I	GAAGAC	2 cut(s)	72, 1335
BstXI	CCANNNNNNTGG	1 cut(s)	706
BstZI	CGGCCG	2 cut(s)	115, 1540
Bsu15I	ATCGAT	3 cut(s)	180, 717, 1047
BsuTUI	ATCGAT	3 cut(s)	180, 717, 1047
BtgI	CCRYGG	2 cut(s)	629, 1911
BtrI	CACGTC	1 cut(s)	455
BtsCI	GGATG	3 cut(s)	984, 1028, 1332
BtsI	GCAGTG	2 cut(s)	550, 1164
BtsIMutI	CAGTG	6 cut(s)	550, 794, 1063, 1153, 1164, 1233
Cac8I	GCNNGC	3 cut(s)	736, 822, 1531
CfoI	GCGC	1 cut(s)	1649
Cfr10I	RCCGGY	3 cut(s)	419, 1538, 1938
Cfr13I	GGNCC	3 cut(s)	101, 1385, 1936
Cfr42I	CCGCGG	1 cut(s)	1914
ClaI	ATCGAT	3 cut(s)	180, 717, 1047
CseI	GACGC	1 cut(s)	77
Csp6I	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
CspCI	CAANNNNNGTGG	6 cut(s)	747, 782, 956, 991, 1006, 1041
CviQI	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
DdeI	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
DpnI	GATC	7 cut(s)	18, 400, 582, 728, 1002, 1115, 1679
DpnII	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
EaeI	YGGCCR	3 cut(s)	115, 1540, 1976
EagI	CGGCCG	2 cut(s)	115, 1540
Eam1104I	CTCTTC	1 cut(s)	803
EarI	CTCTTC	1 cut(s)	803
EciI	GGCGGA	1 cut(s)	184
EclXI	CGGCCG	2 cut(s)	115, 1540
Eco130I	CCWWGG	3 cut(s)	629, 967, 1925
Eco32I	GATATC	1 cut(s)	1187
Eco47I	GGWCC	2 cut(s)	1385, 1936
Eco52I	CGGCCG	2 cut(s)	115, 1540
Eco57I	CTGAAG	4 cut(s)	1226, 1602, 1815, 1881
Eco88I	CYCGRG	3 cut(s)	96, 520, 903
EcoRI	GAATTC	1 cut(s)	1698
EcoRII	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
EcoRV	GATATC	1 cut(s)	1187
EcoT14I	CCWWGG	3 cut(s)	629, 967, 1925
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	629, 967, 1925
Esp3I	CGTCTC	1 cut(s)	528
FaqI	GGGAC	4 cut(s)	229, 689, 1163, 1949
FauNDI	CATATG	1 cut(s)	1221
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	711
Fnu4HI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
FokI	GGATG	3 cut(s)	991, 1035, 1339
Fsp4HI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
FspBI	CTAG	3 cut(s)	59, 186, 461
GlaI	GCGC	1 cut(s)	1648
GluI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
GsaI	CCCAGC	1 cut(s)	1697
GsuI	CTGGAG	1 cut(s)	1637
HaeII	RGCGCY	1 cut(s)	1650
HapII	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
HgaI	GACGC	1 cut(s)	77
HhaI	GCGC	1 cut(s)	1649
Hin6I	GCGC	1 cut(s)	1647
HinP1I	GCGC	1 cut(s)	1647
HincII	GTYRAC	2 cut(s)	458, 949
HindII	GTYRAC	2 cut(s)	458, 949
HindIII	AAGCTT	1 cut(s)	1226
HpaII	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
HphI	GGTGA	5 cut(s)	11, 305, 434, 791, 797
Hpy166II	GTNNAC	9 cut(s)	458, 712, 794, 869, 898, 949, 1061, 1475, 1963
Hpy8I	GTNNAC	9 cut(s)	458, 712, 794, 869, 898, 949, 1061, 1475, 1963
HpyAV	CCTTC	1 cut(s)	503
HpyCH4III	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
HpyCH4IV	ACGT	2 cut(s)	454, 1714
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
HpyF3I	CTNAG	8 cut(s)	152, 501, 1055, 1074, 1332, 1628, 1764, 1899
HpySE526I	ACGT	2 cut(s)	454, 1714
HspAI	GCGC	1 cut(s)	1647
Ksp22I	TGATCA	1 cut(s)	580
KspI	CCGCGG	1 cut(s)	1914
Kzo9I	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Lsp1109I	GCAGC	6 cut(s)	528, 1166, 1405, 1463, 1624, 1987
LweI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
MaeI	CTAG	3 cut(s)	59, 186, 461
MaeII	ACGT	2 cut(s)	454, 1714
MaeIII	GTNAC	4 cut(s)	245, 383, 1037, 1816
MalI	GATC	7 cut(s)	18, 400, 582, 728, 1002, 1115, 1679
MboI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
MfeI	CAATTG	1 cut(s)	744
MhlI	GDGCHC	1 cut(s)	1063
MlyI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
MmeI	TCCRAC	1 cut(s)	165
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
MslI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
MspA1I	CMGCKG	4 cut(s)	1454, 1545, 1913, 1993
MspCI	CTTAAG	1 cut(s)	1064
MspI	CCGG	6 cut(s)	157, 240, 314, 420, 1539, 1939
MspR9I	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
MunI	CAATTG	1 cut(s)	744
Mva1269I	GAATGC	1 cut(s)	4
MvaI	CCWGG	5 cut(s)	994, 1182, 1304, 1389, 1642
MvnI	CGCG	2 cut(s)	1913, 1981
MwoI	GCNNNNNNNGC	4 cut(s)	1225, 1460, 1539, 1646
NciI	CCSGG	2 cut(s)	241, 315
NcoI	CCATGG	1 cut(s)	629
NdeI	CATATG	1 cut(s)	1221
NdeII	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
NlaIV	GGNNCC	4 cut(s)	42, 481, 1758, 1937
NmuCI	GTSAC	3 cut(s)	383, 1037, 1816
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
NspV	TTCGAA	1 cut(s)	1032
OliI	CACNNNNGTG	1 cut(s)	1066
PaeI	GCATGC	1 cut(s)	738
PaeR7I	CTCGAG	1 cut(s)	903
PasI	CCCWGGG	1 cut(s)	1303
PciI	ACATGT	3 cut(s)	760, 943, 1984
PctI	GAATGC	1 cut(s)	4
PdmI	GAANNNNTTC	1 cut(s)	1496
PfeI	GAWTC	8 cut(s)	191, 310, 667, 832, 889, 915, 1029, 1850
PflFI	GACNNNGTC	1 cut(s)	343
PfoI	TCCNGGA	1 cut(s)	239
PkrI	GCNGC	9 cut(s)	119, 518, 1156, 1395, 1453, 1544, 1639, 1980, 2002
PleI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
PpsI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
Ppu21I	YACGTR	1 cut(s)	1715
PscI	ACATGT	3 cut(s)	760, 943, 1984
PsiI	TTATAA	1 cut(s)	1584
Psp6I	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
PspFI	CCCAGC	1 cut(s)	1693
PspGI	CCWGG	5 cut(s)	992, 1180, 1302, 1387, 1640
PspN4I	GGNNCC	4 cut(s)	42, 481, 1758, 1937
PspPI	GGNCC	3 cut(s)	101, 1385, 1936
PspXI	VCTCGAGB	1 cut(s)	903
PsyI	GACNNNGTC	1 cut(s)	343
PvuII	CAGCTG	2 cut(s)	1454, 1993
RsaI	GTAC	5 cut(s)	793, 868, 924, 1511, 1744
RsaNI	GTAC	5 cut(s)	792, 867, 923, 1510, 1743
RseI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
SacII	CCGCGG	1 cut(s)	1914
SaqAI	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
SatI	GCNGC	9 cut(s)	118, 517, 1155, 1394, 1452, 1543, 1638, 1979, 2001
Sau3AI	GATC	7 cut(s)	16, 398, 580, 726, 1000, 1113, 1677
Sau96I	GGNCC	3 cut(s)	101, 1385, 1936
ScaI	AGTACT	1 cut(s)	1511
SchI	GAGTC	5 cut(s)	144, 433, 615, 1813, 2003
ScrFI	CCNGG	7 cut(s)	241, 315, 994, 1182, 1304, 1389, 1642
SduI	GDGCHC	1 cut(s)	1063
SfaNI	GCATC	6 cut(s)	172, 969, 1141, 1181, 1421, 1808
SfcI	CTRYAG	1 cut(s)	1413
Sfr274I	CTCGAG	1 cut(s)	903
Sfr303I	CCGCGG	1 cut(s)	1914
SfuI	TTCGAA	1 cut(s)	1032
SgrBI	CCGCGG	1 cut(s)	1914
SinI	GGWCC	2 cut(s)	1385, 1936
SlaI	CTCGAG	1 cut(s)	903
SmiMI	CAYNNNNRTG	3 cut(s)	230, 567, 1066
SmlI	CTYRAG	4 cut(s)	468, 903, 1064, 2004
SmoI	CTYRAG	4 cut(s)	468, 903, 1064, 2004
SpeI	ACTAGT	1 cut(s)	460
SphI	GCATGC	1 cut(s)	738
SsiI	CCGC	8 cut(s)	118, 129, 195, 1543, 1911, 1913, 1942, 1979
SspMI	CTAG	3 cut(s)	59, 186, 461
StyD4I	CCNGG	7 cut(s)	239, 313, 992, 1180, 1302, 1387, 1640
StyI	CCWWGG	3 cut(s)	629, 967, 1925
TaaI	ACNGT	8 cut(s)	23, 539, 1148, 1237, 1417, 1671, 1782, 1967
TaiI	ACGT	2 cut(s)	457, 1717
TaqI	TCGA	8 cut(s)	180, 330, 442, 717, 904, 1032, 1047, 1802
TaqII	GACCGA	1 cut(s)	1373
TatI	WGTACW	2 cut(s)	922, 1509
TauI	GCSGC	3 cut(s)	120, 1545, 1981
TfiI	GAWTC	8 cut(s)	191, 310, 667, 832, 889, 915, 1029, 1850
Tru1I	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
Tru9I	TTAA	5 cut(s)	495, 1043, 1065, 1086, 1869
TscAI	CASTG	6 cut(s)	550, 801, 1063, 1153, 1164, 1240
TseFI	GTSAC	3 cut(s)	383, 1037, 1816
TseI	GCWGC	6 cut(s)	516, 1154, 1393, 1451, 1637, 2000
Tsp45I	GTSAC	3 cut(s)	383, 1037, 1816
TspDTI	ATGAA	8 cut(s)	369, 764, 821, 849, 1220, 1238, 1845, 1902
TspGWI	ACGGA	1 cut(s)	1670
TspRI	CASTG	6 cut(s)	550, 801, 1063, 1153, 1164, 1240
Tth111I	GACNNNGTC	1 cut(s)	343
Vha464I	CTTAAG	1 cut(s)	1064
VneI	GTGCAC	1 cut(s)	1059
VpaK11BI	GGWCC	2 cut(s)	1385, 1936
XapI	RAATTY	1 cut(s)	1698
XceI	RCATGY	5 cut(s)	738, 764, 947, 1725, 1988
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1404
XhoI	CTCGAG	1 cut(s)	903
XmiI	GTMKAC	1 cut(s)	711
XmnI	GAANNNNTTC	1 cut(s)	1496
XspI	CTAG	3 cut(s)	59, 186, 461
ZrmI	AGTACT	1 cut(s)	1511
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.