SWI SNF complex component SNF12 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01890 AT5G14170 |
| fragaria_vesca | FvH4_6g53310 FvH4_6g53310 FvH4_6g53310 |
| malus_domestica | MD09G1011600.v1.1 MD17G1012300.v1.1 |
| prunus_persica | Prupe.3G305400_v2.0.a1 Prupe.3G305400_v2.0.a1 Prupe.3G305400_v2.0.a1 |
| pyrus_communis | pycom111g00990 pycom17g00980 |
| rosa_chinensis | RchiOBHm_Chr2g0175471 |
| rosa_laevigata | RLG00000022330 |
| rosa_multiflora | Rmu_sc0003302.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00077300 |
| rosa_rugosa | Rorug02G0584700 Rorug02G0584800 Rorug02G0584900 Rorug02G0585000 |
| rosa_samantha | Rh2AG664500 Rh2BG675200 Rh2CG638400 Rh2DG689200 |
| rosa_wichuraiana | Rw2G054460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 865 |
| AciI | CCGC | 3 cut(s) | 604, 1006, 1175 |
| AclWI | GGATC | 7 cut(s) | 662, 710, 716, 816, 1085, 1287, 1514 |
| AcoI | YGGCCR | 1 cut(s) | 1296 |
| AcsI | RAATTY | 5 cut(s) | 274, 908, 981, 1130, 1421 |
| AcuI | CTGAAG | 1 cut(s) | 1085 |
| AdeI | CACNNNGTG | 1 cut(s) | 1039 |
| AfeI | AGCGCT | 1 cut(s) | 329 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 172, 232, 309, 678, 875, 1011, 1533 |
| AgsI | TTSAA | 6 cut(s) | 107, 787, 1001, 1026, 1442, 1540 |
| AjnI | CCWGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 138, 170, 340, 372, 911, 943 |
| Alw26I | GTCTC | 2 cut(s) | 38, 808 |
| AlwI | GGATC | 7 cut(s) | 662, 710, 716, 816, 1085, 1287, 1514 |
| Ama87I | CYCGRG | 2 cut(s) | 509, 947 |
| Aor51HI | AGCGCT | 1 cut(s) | 329 |
| AoxI | GGCC | 3 cut(s) | 240, 567, 1296 |
| ApeKI | GCWGC | 3 cut(s) | 416, 601, 1349 |
| ApoI | RAATTY | 5 cut(s) | 274, 908, 981, 1130, 1421 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 266, 298 |
| AspLEI | GCGC | 3 cut(s) | 330, 354, 946 |
| AspS9I | GGNCC | 3 cut(s) | 241, 568, 742 |
| AsuHPI | GGTGA | 6 cut(s) | 42, 282, 378, 852, 898, 1126 |
| AvaI | CYCGRG | 2 cut(s) | 509, 947 |
| AvaII | GGWCC | 1 cut(s) | 742 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1125, 1158 |
| BalI | TGGCCA | 1 cut(s) | 1298 |
| BanI | GGYRCC | 1 cut(s) | 865 |
| BanII | GRGCYC | 1 cut(s) | 43 |
| BauI | CACGAG | 1 cut(s) | 522 |
| BbvI | GCAGC | 3 cut(s) | 403, 588, 1361 |
| BccI | CCATC | 3 cut(s) | 232, 707, 970 |
| BciT130I | CCWGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| BcoDI | GTCTC | 2 cut(s) | 38, 808 |
| BfaI | CTAG | 1 cut(s) | 1047 |
| BfmI | CTRYAG | 1 cut(s) | 1416 |
| BfoI | RGCGCY | 1 cut(s) | 331 |
| BisI | GCNGC | 3 cut(s) | 417, 602, 1350 |
| BlsI | GCNGC | 3 cut(s) | 418, 603, 1351 |
| Bme1390I | CCNGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| Bme18I | GGWCC | 1 cut(s) | 742 |
| BmeT110I | CYCGRG | 2 cut(s) | 509, 947 |
| BmgT120I | GGNCC | 3 cut(s) | 241, 568, 742 |
| BmiI | GGNNCC | 2 cut(s) | 40, 867 |
| BmrFI | CCNGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| BmsI | GCATC | 1 cut(s) | 1533 |
| BpmI | CTGGAG | 1 cut(s) | 1494 |
| Bpu10I | CCTNAGC | 1 cut(s) | 231 |
| Bsa29I | ATCGAT | 1 cut(s) | 1509 |
| BsaJI | CCNNGG | 9 cut(s) | 145, 171, 183, 308, 399, 1010, 1137, 1396, 1531 |
| BsaWI | WCCGGW | 1 cut(s) | 1553 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 172, 232, 309, 678, 875, 1011, 1533 |
| Bse118I | RCCGGY | 1 cut(s) | 862 |
| Bse3DI | GCAATG | 2 cut(s) | 67, 267 |
| BseBI | CCWGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| BseCI | ATCGAT | 1 cut(s) | 1509 |
| BseDI | CCNNGG | 9 cut(s) | 145, 171, 183, 308, 399, 1010, 1137, 1396, 1531 |
| BseGI | GGATG | 1 cut(s) | 558 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 172, 232, 309, 678, 875, 1011, 1533 |
| BseMI | GCAATG | 2 cut(s) | 67, 267 |
| BseMII | CTCAG | 5 cut(s) | 203, 233, 245, 383, 1172 |
| BseXI | GCAGC | 3 cut(s) | 403, 588, 1361 |
| BseYI | CCCAGC | 1 cut(s) | 501 |
| BsgI | GTGCAG | 1 cut(s) | 1368 |
| BshFI | GGCC | 3 cut(s) | 242, 569, 1298 |
| BshNI | GGYRCC | 1 cut(s) | 865 |
| BshVI | ATCGAT | 1 cut(s) | 1509 |
| BsiHKCI | CYCGRG | 2 cut(s) | 509, 947 |
| BsiSI | CCGG | 2 cut(s) | 863, 1554 |
| BslFI | GGGAC | 1 cut(s) | 914 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 172, 232, 309, 678, 875, 1011, 1533 |
| BsmAI | GTCTC | 2 cut(s) | 38, 808 |
| BsmFI | GGGAC | 1 cut(s) | 914 |
| BsmI | GAATGC | 2 cut(s) | 319, 588 |
| BsnI | GGCC | 3 cut(s) | 242, 569, 1298 |
| BsoBI | CYCGRG | 2 cut(s) | 509, 947 |
| Bsp1286I | GDGCHC | 1 cut(s) | 43 |
| Bsp143I | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| Bsp19I | CCATGG | 3 cut(s) | 399, 1137, 1531 |
| BspACI | CCGC | 3 cut(s) | 604, 1006, 1175 |
| BspANI | GGCC | 3 cut(s) | 242, 569, 1298 |
| BspCNI | CTCAG | 5 cut(s) | 202, 232, 244, 384, 1171 |
| BspDI | ATCGAT | 1 cut(s) | 1509 |
| BspHI | TCATGA | 1 cut(s) | 871 |
| BspLI | GGNNCC | 2 cut(s) | 40, 867 |
| BspPI | GGATC | 7 cut(s) | 662, 710, 716, 816, 1085, 1287, 1514 |
| BspT107I | GGYRCC | 1 cut(s) | 865 |
| BsrDI | GCAATG | 2 cut(s) | 67, 267 |
| BsrFI | RCCGGY | 1 cut(s) | 862 |
| BssAI | RCCGGY | 1 cut(s) | 862 |
| BssECI | CCNNGG | 9 cut(s) | 145, 171, 183, 308, 399, 1010, 1137, 1396, 1531 |
| BssMI | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| BssSI | CACGAG | 1 cut(s) | 522 |
| BssT1I | CCWWGG | 5 cut(s) | 145, 399, 1137, 1396, 1531 |
| Bst2BI | CACGAG | 1 cut(s) | 522 |
| Bst2UI | CCWGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| Bst4CI | ACNGT | 5 cut(s) | 916, 927, 972, 1088, 1487 |
| Bst6I | CTCTTC | 2 cut(s) | 884, 1113 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 98, 1346 |
| BstC8I | GCNNGC | 3 cut(s) | 117, 1382, 1386 |
| BstDEI | CTNAG | 6 cut(s) | 27, 189, 219, 231, 392, 1158 |
| BstDSI | CCRYGG | 3 cut(s) | 399, 1137, 1531 |
| BstEII | GGTNACC | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 558 |
| BstH2I | RGCGCY | 1 cut(s) | 331 |
| BstHHI | GCGC | 3 cut(s) | 330, 354, 946 |
| BstKTI | GATC | 9 cut(s) | 670, 705, 724, 811, 860, 1093, 1282, 1509, 1513 |
| BstMAI | GTCTC | 2 cut(s) | 38, 808 |
| BstMBI | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 98, 585, 1063, 1232, 1295, 1346, 1478 |
| BstNI | CCWGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| BstNSI | RCATGY | 1 cut(s) | 1239 |
| BstPI | GGTNACC | 1 cut(s) | 140 |
| BstSCI | CCNGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| BstSFI | CTRYAG | 1 cut(s) | 1416 |
| BstV1I | GCAGC | 3 cut(s) | 403, 588, 1361 |
| BstX2I | RGATCY | 2 cut(s) | 702, 1279 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 263 |
| BstYI | RGATCY | 2 cut(s) | 702, 1279 |
| Bsu15I | ATCGAT | 1 cut(s) | 1509 |
| BsuRI | GGCC | 3 cut(s) | 242, 569, 1298 |
| BsuTUI | ATCGAT | 1 cut(s) | 1509 |
| BtgI | CCRYGG | 3 cut(s) | 399, 1137, 1531 |
| BtgZI | GCGATG | 1 cut(s) | 251 |
| BtsCI | GGATG | 1 cut(s) | 558 |
| BtsIMutI | CAGTG | 1 cut(s) | 1433 |
| Cac8I | GCNNGC | 3 cut(s) | 117, 1382, 1386 |
| CciI | TCATGA | 1 cut(s) | 871 |
| CfoI | GCGC | 3 cut(s) | 330, 354, 946 |
| Cfr10I | RCCGGY | 1 cut(s) | 862 |
| Cfr13I | GGNCC | 3 cut(s) | 241, 568, 742 |
| ClaI | ATCGAT | 1 cut(s) | 1509 |
| CviAII | CATG | 8 cut(s) | 203, 400, 872, 1067, 1138, 1236, 1367, 1532 |
| DdeI | CTNAG | 6 cut(s) | 27, 189, 219, 231, 392, 1158 |
| DpnI | GATC | 9 cut(s) | 669, 704, 723, 810, 859, 1092, 1281, 1508, 1512 |
| DpnII | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| DraI | TTTAAA | 1 cut(s) | 1461 |
| DraIII | CACNNNGTG | 1 cut(s) | 1039 |
| EaeI | YGGCCR | 1 cut(s) | 1296 |
| Eam1104I | CTCTTC | 2 cut(s) | 884, 1113 |
| EarI | CTCTTC | 2 cut(s) | 884, 1113 |
| Eco130I | CCWWGG | 5 cut(s) | 145, 399, 1137, 1396, 1531 |
| Eco24I | GRGCYC | 1 cut(s) | 43 |
| Eco32I | GATATC | 1 cut(s) | 1155 |
| Eco47I | GGWCC | 1 cut(s) | 742 |
| Eco47III | AGCGCT | 1 cut(s) | 329 |
| Eco57I | CTGAAG | 1 cut(s) | 1085 |
| Eco88I | CYCGRG | 2 cut(s) | 509, 947 |
| Eco91I | GGTNACC | 1 cut(s) | 140 |
| EcoO109I | RGGNCCY | 1 cut(s) | 568 |
| EcoO65I | GGTNACC | 1 cut(s) | 140 |
| EcoRII | CCWGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| EcoRV | GATATC | 1 cut(s) | 1155 |
| EcoT14I | CCWWGG | 5 cut(s) | 145, 399, 1137, 1396, 1531 |
| EcoT38I | GRGCYC | 1 cut(s) | 43 |
| ErhI | CCWWGG | 5 cut(s) | 145, 399, 1137, 1396, 1531 |
| FaeI | CATG | 8 cut(s) | 206, 403, 875, 1070, 1141, 1239, 1370, 1535 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 555, 587, 568, 600 |
| FaqI | GGGAC | 1 cut(s) | 914 |
| FatI | CATG | 8 cut(s) | 202, 399, 871, 1066, 1137, 1235, 1366, 1531 |
| FauI | CCCGC | 2 cut(s) | 1013, 1182 |
| Fnu4HI | GCNGC | 3 cut(s) | 417, 602, 1350 |
| FokI | GGATG | 1 cut(s) | 545 |
| FriOI | GRGCYC | 1 cut(s) | 43 |
| Fsp4HI | GCNGC | 3 cut(s) | 417, 602, 1350 |
| FspBI | CTAG | 1 cut(s) | 1047 |
| GlaI | GCGC | 3 cut(s) | 329, 353, 945 |
| GluI | GCNGC | 3 cut(s) | 417, 602, 1350 |
| GsaI | CCCAGC | 1 cut(s) | 505 |
| GsuI | CTGGAG | 1 cut(s) | 1494 |
| HaeII | RGCGCY | 1 cut(s) | 331 |
| HaeIII | GGCC | 3 cut(s) | 242, 569, 1298 |
| HapII | CCGG | 2 cut(s) | 863, 1554 |
| HhaI | GCGC | 3 cut(s) | 330, 354, 946 |
| Hin1II | CATG | 8 cut(s) | 206, 403, 875, 1070, 1141, 1239, 1370, 1535 |
| Hin6I | GCGC | 3 cut(s) | 328, 352, 944 |
| HinP1I | GCGC | 3 cut(s) | 328, 352, 944 |
| HincII | GTYRAC | 1 cut(s) | 556 |
| HindII | GTYRAC | 1 cut(s) | 556 |
| HindIII | AAGCTT | 4 cut(s) | 437, 959, 1205, 1463 |
| HinfI | GANTC | 5 cut(s) | 31, 485, 530, 646, 1442 |
| HpaII | CCGG | 2 cut(s) | 863, 1554 |
| HphI | GGTGA | 6 cut(s) | 42, 282, 378, 852, 898, 1126 |
| Hpy166II | GTNNAC | 2 cut(s) | 556, 919 |
| Hpy188I | TCNGA | 8 cut(s) | 38, 393, 594, 813, 1104, 1306, 1515, 1562 |
| Hpy188III | TCNNGA | 8 cut(s) | 443, 509, 725, 745, 787, 824, 872, 1212 |
| Hpy8I | GTNNAC | 2 cut(s) | 556, 919 |
| Hpy99I | CGWCG | 1 cut(s) | 1380 |
| HpyAV | CCTTC | 3 cut(s) | 303, 366, 544 |
| HpyCH4III | ACNGT | 5 cut(s) | 916, 927, 972, 1088, 1487 |
| HpyCH4V | TGCA | 9 cut(s) | 92, 101, 317, 542, 588, 1057, 1235, 1349, 1433 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 98, 585, 1063, 1232, 1295, 1346, 1478 |
| HpyF3I | CTNAG | 6 cut(s) | 27, 189, 219, 231, 392, 1158 |
| Hsp92II | CATG | 8 cut(s) | 206, 403, 875, 1070, 1141, 1239, 1370, 1535 |
| HspAI | GCGC | 3 cut(s) | 328, 352, 944 |
| Kzo9I | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| LmnI | GCTCC | 2 cut(s) | 38, 1192 |
| Lsp1109I | GCAGC | 3 cut(s) | 403, 588, 1361 |
| LweI | GCATC | 1 cut(s) | 1533 |
| MaeI | CTAG | 1 cut(s) | 1047 |
| MaeIII | GTNAC | 4 cut(s) | 48, 140, 384, 793 |
| MalI | GATC | 9 cut(s) | 669, 704, 723, 810, 859, 1092, 1281, 1508, 1512 |
| MboI | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| MflI | RGATCY | 2 cut(s) | 702, 1279 |
| MhlI | GDGCHC | 1 cut(s) | 43 |
| MlsI | TGGCCA | 1 cut(s) | 1298 |
| MluCI | AATT | 9 cut(s) | 209, 274, 798, 908, 937, 981, 1052, 1130, 1421 |
| MluNI | TGGCCA | 1 cut(s) | 1298 |
| MlyI | GAGTC | 1 cut(s) | 40 |
| MmeI | TCCRAC | 1 cut(s) | 909 |
| Mox20I | TGGCCA | 1 cut(s) | 1298 |
| MscI | TGGCCA | 1 cut(s) | 1298 |
| MseI | TTAA | 6 cut(s) | 246, 573, 618, 687, 1083, 1460 |
| Msp20I | TGGCCA | 1 cut(s) | 1298 |
| MspA1I | CMGCKG | 1 cut(s) | 1226 |
| MspI | CCGG | 2 cut(s) | 863, 1554 |
| MspR9I | CCNGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| Mva1269I | GAATGC | 2 cut(s) | 319, 588 |
| MvaI | CCWGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 98, 585, 1063, 1232, 1295, 1346, 1478 |
| NcoI | CCATGG | 3 cut(s) | 399, 1137, 1531 |
| NdeII | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| NlaIII | CATG | 8 cut(s) | 206, 403, 875, 1070, 1141, 1239, 1370, 1535 |
| NlaIV | GGNNCC | 2 cut(s) | 40, 867 |
| NmuCI | GTSAC | 2 cut(s) | 48, 384 |
| NspI | RCATGY | 1 cut(s) | 1239 |
| PaeR7I | CTCGAG | 1 cut(s) | 509 |
| PagI | TCATGA | 1 cut(s) | 871 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1381 |
| PctI | GAATGC | 2 cut(s) | 319, 588 |
| PfeI | GAWTC | 4 cut(s) | 485, 530, 646, 1442 |
| PkrI | GCNGC | 3 cut(s) | 418, 603, 1351 |
| PleI | GAGTC | 1 cut(s) | 39 |
| PpsI | GAGTC | 1 cut(s) | 39 |
| Psp6I | CCWGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| PspEI | GGTNACC | 1 cut(s) | 140 |
| PspFI | CCCAGC | 1 cut(s) | 501 |
| PspGI | CCWGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| PspN4I | GGNNCC | 2 cut(s) | 40, 867 |
| PspPI | GGNCC | 3 cut(s) | 241, 568, 742 |
| PsuI | RGATCY | 2 cut(s) | 702, 1279 |
| PvuII | CAGCTG | 1 cut(s) | 1226 |
| SaqAI | TTAA | 6 cut(s) | 246, 573, 618, 687, 1083, 1460 |
| SatI | GCNGC | 3 cut(s) | 417, 602, 1350 |
| Sau3AI | GATC | 9 cut(s) | 667, 702, 721, 808, 857, 1090, 1279, 1506, 1510 |
| Sau96I | GGNCC | 3 cut(s) | 241, 568, 742 |
| SchI | GAGTC | 1 cut(s) | 40 |
| ScrFI | CCNGG | 5 cut(s) | 173, 185, 309, 735, 1012 |
| SduI | GDGCHC | 1 cut(s) | 43 |
| SfaNI | GCATC | 1 cut(s) | 1533 |
| SfcI | CTRYAG | 1 cut(s) | 1416 |
| Sfr274I | CTCGAG | 1 cut(s) | 509 |
| SinI | GGWCC | 1 cut(s) | 742 |
| SlaI | CTCGAG | 1 cut(s) | 509 |
| SmlI | CTYRAG | 1 cut(s) | 509 |
| SmoI | CTYRAG | 1 cut(s) | 509 |
| Sse9I | AATT | 9 cut(s) | 209, 274, 798, 908, 937, 981, 1052, 1130, 1421 |
| SsiI | CCGC | 3 cut(s) | 604, 1006, 1175 |
| SspMI | CTAG | 1 cut(s) | 1047 |
| StyD4I | CCNGG | 5 cut(s) | 171, 183, 307, 733, 1010 |
| StyI | CCWWGG | 5 cut(s) | 145, 399, 1137, 1396, 1531 |
| TaaI | ACNGT | 5 cut(s) | 916, 927, 972, 1088, 1487 |
| TaqI | TCGA | 5 cut(s) | 510, 644, 856, 882, 1509 |
| TasI | AATT | 9 cut(s) | 209, 274, 798, 908, 937, 981, 1052, 1130, 1421 |
| TfiI | GAWTC | 4 cut(s) | 485, 530, 646, 1442 |
| Tru1I | TTAA | 6 cut(s) | 246, 573, 618, 687, 1083, 1460 |
| Tru9I | TTAA | 6 cut(s) | 246, 573, 618, 687, 1083, 1460 |
| TscAI | CASTG | 1 cut(s) | 1440 |
| TseFI | GTSAC | 2 cut(s) | 48, 384 |
| TseI | GCWGC | 3 cut(s) | 416, 601, 1349 |
| Tsp45I | GTSAC | 2 cut(s) | 48, 384 |
| TspDTI | ATGAA | 6 cut(s) | 23, 191, 950, 1142, 1350, 1383 |
| TspRI | CASTG | 1 cut(s) | 1440 |
| VpaK11BI | GGWCC | 1 cut(s) | 742 |
| XapI | RAATTY | 5 cut(s) | 274, 908, 981, 1130, 1421 |
| XceI | RCATGY | 1 cut(s) | 1239 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 128 |
| XhoI | CTCGAG | 1 cut(s) | 509 |
| XspI | CTAG | 1 cut(s) | 1047 |