pycom11g14040

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0005245
Physical Location & Seq
Forward (+)
13839536 .. 13847304
7769 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1287 bp
ATGAGGCCCATACAGCTTCCGGAGCCGCCCGGTCCCAAACTGCGCACGCCGGAAATCTTCGAAGGCGGTGTGTACGGCGTCGTTAGGCGCGCCATCGTGATTGGCAACGGCTCCCCGGGTTCGGAGAATCAGAGCATCGGCTTGGTTTGCGCTCTCGGCCTTGCTGATAAGCATGTCTTATATCGGGTTACAAGGCCGAAAGGAGGATTGAATGAGTGGCTTCACTGGCTCCCAGTTTCTCTTCACAAAAATTTATATTACATTGTAAGACAGATCTGTATTTTATTAAAGTATCGGGGGCAGAAAGTTTTGCCTCAACCTGCAGAAAATGGTGGCAGTGTGGGGTTGAAATGTGTTTTAGAAGCTGATGTCCAGCAGATTGTGACAATGGTTCGTCAGAATTTTGAAAAGGATGGACCTATATTGGTGGTAGCTTCTGGAAGGGATACCATTTCTGTTGCAAGTTCTATTAAACAACTTGCATCTGACAATGTATTTGTTGTTCAGATACTACATCCCAGGTTGCATTTAAATAGATTTGACTTGGTGATTACCCCTAAGCATGATTACTATCCTTTGACACGTGAAGCACAAAAGCAGGTTCCTCAGTTTATTCATAGGTGGATAACTCCACGTGAACCTCCTGACAGTCATGTGGTTCTCACTGTTGGAGCTTTACATCAAGTTGATGCTGGTGCACTTCGTAATGCAGCTAGTGCATGGCGTGATGAGTTTGCACCTTTGCCGAAACCCTTACTTGTTGTGAACATTGGTGGCCCTACAGGCAATTGTCGTTATGGTGTGGACCTTGCAAAGCAATTGACTACCAACCTGCTCAGTGTTCTTCCTAGCTGTGGGAGTATCAGAATATGTTTCTCTAATAAGACTCCTGAAAAGGTATCTAATGTTATAGCGAAAGGGCTTGGCGGTAATCCAAAAGTTTATATCTGGGATGGCCAAGAGCCAAACCCACACATGGGCCATCTAGCCTGGGCCGATGCGTTTGTTGTCACTGCAGATTCTGTCAGTATGATAAGCGAGGTTTGCAGCACTGGGAAGCCTGTCTATATTATGGGAGCTGAGCGATGTACTTGGAAGTTCTCAGAGTTCCATAAATCACTTAAGGATCGAGGAGTAGTTCGGCCATTCACAGGTTCTGAGAATATTTCAGAGAGCTGGAGTTACCCTCCGCTCAATGAAACCGCAGAAGCAGCCAGTCGAGTGCATAAAGCACTTGCAGAGCGTGGATGGAGATTGCGACCATACACGTATAGGAATGACAGCTAG

Protein Analysis

429

Amino Acids

47.39

Weight (kDa)

9.29

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 39 - 412 2.3e-107 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 44
Acc36I ACCTGC 3 cut(s) 328, 589, 840
AccBSI CCGCTC 1 cut(s) 1192
AccII CGCG 1 cut(s) 90
AccIII TCCGGA 1 cut(s) 19
AciI CCGC 5 cut(s) 26, 66, 927, 1190, 1203
AclWI GGATC 1 cut(s) 1134
AcoI YGGCCR 2 cut(s) 955, 1142
AcsI RAATTY 2 cut(s) 250, 400
AcvI CACGTG 2 cut(s) 584, 635
AcyI GRCGYC 1 cut(s) 78
AfaI GTAC 2 cut(s) 74, 1090
AfiI CCNNNNNNNGG 6 cut(s) 121, 203, 854, 976, 977, 1151
AflII CTTAAG 1 cut(s) 1121
AflIII ACRYGT 2 cut(s) 581, 1266
AgsI TTSAA 3 cut(s) 211, 349, 407
AjnI CCWGG 2 cut(s) 518, 989
AluBI AGCT 9 cut(s) 16, 365, 434, 674, 713, 852, 1079, 1176, 1284
AluI AGCT 9 cut(s) 16, 365, 434, 674, 713, 852, 1079, 1176, 1284
Alw21I GWGCWC 1 cut(s) 700
Alw44I GTGCAC 1 cut(s) 696
AlwI GGATC 1 cut(s) 1134
AlwNI CAGNNNCTG 2 cut(s) 1022, 1157
Ama87I CYCGRG 1 cut(s) 115
Aor13HI TCCGGA 1 cut(s) 19
AoxI GGCC 8 cut(s) 5, 157, 194, 775, 955, 979, 993, 1142
ApaLI GTGCAC 1 cut(s) 696
ApeKI GCWGC 3 cut(s) 710, 1047, 1211
ApoI RAATTY 2 cut(s) 250, 400
ArsI GACNNNNNNTTYG 2 cut(s) 479, 511
AscI GGCGCGCC 1 cut(s) 88
AspLEI GCGC 4 cut(s) 45, 90, 92, 152
AspS9I GGNCC 7 cut(s) 6, 32, 416, 776, 805, 979, 993
AsuC2I CCSGG 3 cut(s) 30, 116, 117
AsuHPI GGTGA 1 cut(s) 559
AsuII TTCGAA 1 cut(s) 60
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 3 cut(s) 32, 416, 805
BaeGI GKGCMC 1 cut(s) 700
BalI TGGCCA 1 cut(s) 957
BbrPI CACGTG 2 cut(s) 584, 635
Bbv12I GWGCWC 1 cut(s) 700
BbvI GCAGC 3 cut(s) 722, 1059, 1223
BccI CCATC 5 cut(s) 101, 407, 947, 990, 1242
BceAI ACGGC 2 cut(s) 91, 124
BciT130I CCWGG 2 cut(s) 520, 991
BciVI GTATCC 1 cut(s) 439
BcnI CCSGG 3 cut(s) 30, 116, 117
BfaI CTAG 4 cut(s) 714, 849, 986, 1285
BfmI CTRYAG 3 cut(s) 321, 780, 1014
BfrI CTTAAG 1 cut(s) 1121
BfuAI ACCTGC 3 cut(s) 328, 589, 840
BfuI GTATCC 1 cut(s) 439
BglI GCCNNNNNGGC 1 cut(s) 783
BglII AGATCT 1 cut(s) 273
BisI GCNGC 4 cut(s) 26, 711, 1048, 1212
BlpI GCTNAGC 1 cut(s) 1080
BlsI GCNGC 4 cut(s) 27, 712, 1049, 1213
Bme1390I CCNGG 5 cut(s) 30, 116, 117, 520, 991
Bme18I GGWCC 3 cut(s) 32, 416, 805
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 7 cut(s) 6, 32, 416, 776, 805, 979, 993
BmiI GGNNCC 5 cut(s) 24, 34, 112, 230, 603
BmrFI CCNGG 5 cut(s) 30, 116, 117, 520, 991
BmrI ACTGGG 2 cut(s) 227, 1062
BmsI GCATC 4 cut(s) 144, 491, 679, 988
BmuI ACTGGG 2 cut(s) 227, 1062
BplI GAGNNNNNCTC 2 cut(s) 1171, 1203
BpmI CTGGAG 1 cut(s) 1198
Bpu10I CCTNAGC 1 cut(s) 558
Bpu1102I GCTNAGC 1 cut(s) 1080
Bpu14I TTCGAA 1 cut(s) 60
BpuMI CCSGG 3 cut(s) 30, 116, 117
BsaAI YACGTR 3 cut(s) 584, 635, 1269
BsaBI GATNNNNATC 1 cut(s) 570
BsaHI GRCGYC 1 cut(s) 78
BsaJI CCNNGG 4 cut(s) 114, 115, 518, 990
BsaWI WCCGGW 1 cut(s) 19
Bsc4I CCNNNNNNNGG 6 cut(s) 121, 203, 854, 976, 977, 1151
Bse1I ACTGG 4 cut(s) 230, 233, 1057, 1215
Bse8I GATNNNNATC 1 cut(s) 570
BseAI TCCGGA 1 cut(s) 19
BseBI CCWGG 2 cut(s) 520, 991
BseDI CCNNGG 4 cut(s) 114, 115, 518, 990
BseGI GGATG 4 cut(s) 418, 514, 958, 1253
BseJI GATNNNNATC 1 cut(s) 570
BseLI CCNNNNNNNGG 6 cut(s) 121, 203, 854, 976, 977, 1151
BseMII CTCAG 5 cut(s) 620, 850, 1071, 1116, 1149
BseNI ACTGG 4 cut(s) 230, 233, 1057, 1215
BsePI GCGCGC 1 cut(s) 88
BseRI GAGGAG 1 cut(s) 1146
BseSI GKGCMC 1 cut(s) 700
BseXI GCAGC 3 cut(s) 722, 1059, 1223
Bsh1236I CGCG 1 cut(s) 90
BshFI GGCC 8 cut(s) 7, 159, 196, 777, 957, 981, 995, 1144
BsiHKAI GWGCWC 1 cut(s) 700
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 4 cut(s) 20, 30, 50, 116
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 6 cut(s) 121, 203, 854, 976, 977, 1151
BsmFI GGGAC 1 cut(s) 18
BsnI GGCC 8 cut(s) 7, 159, 196, 777, 957, 981, 995, 1144
BsoBI CYCGRG 1 cut(s) 115
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 1 cut(s) 700
Bsp13I TCCGGA 1 cut(s) 19
Bsp143I GATC 2 cut(s) 273, 1126
Bsp1720I GCTNAGC 1 cut(s) 1080
BspACI CCGC 5 cut(s) 26, 66, 927, 1190, 1203
BspANI GGCC 8 cut(s) 7, 159, 196, 777, 957, 981, 995, 1144
BspCNI CTCAG 5 cut(s) 619, 849, 1072, 1115, 1150
BspEI TCCGGA 1 cut(s) 19
BspFNI CGCG 1 cut(s) 90
BspLI GGNNCC 5 cut(s) 24, 34, 112, 230, 603
BspMAI CTGCAG 2 cut(s) 325, 1018
BspMI ACCTGC 3 cut(s) 328, 589, 840
BspPI GGATC 1 cut(s) 1134
BspT104I TTCGAA 1 cut(s) 60
BspTI CTTAAG 1 cut(s) 1121
BsrBI CCGCTC 1 cut(s) 1192
BsrI ACTGG 4 cut(s) 230, 233, 1057, 1215
BssECI CCNNGG 4 cut(s) 114, 115, 518, 990
BssHII GCGCGC 1 cut(s) 88
BssMI GATC 2 cut(s) 273, 1126
BssNI GRCGYC 1 cut(s) 78
Bst2UI CCWGG 2 cut(s) 520, 991
Bst4CI ACNGT 2 cut(s) 650, 667
Bst6I CTCTTC 1 cut(s) 246
BstACI GRCGYC 1 cut(s) 78
BstAFI CTTAAG 1 cut(s) 1121
BstAPI GCANNNNNTGC 1 cut(s) 716
BstBAI YACGTR 3 cut(s) 584, 635, 1269
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 2 cut(s) 47, 90
BstDEI CTNAG 6 cut(s) 558, 606, 836, 1080, 1102, 1158
BstF5I GGATG 4 cut(s) 418, 514, 958, 1253
BstFNI CGCG 1 cut(s) 90
BstHHI GCGC 4 cut(s) 45, 90, 92, 152
BstKTI GATC 2 cut(s) 276, 1129
BstMBI GATC 2 cut(s) 273, 1126
BstMWI GCNNNNNNNGC 9 cut(s) 13, 22, 147, 156, 226, 716, 783, 1044, 1211
BstNI CCWGG 2 cut(s) 520, 991
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 5 cut(s) 28, 114, 115, 518, 989
BstSFI CTRYAG 3 cut(s) 321, 780, 1014
BstSLI GKGCMC 1 cut(s) 700
BstUI CGCG 1 cut(s) 90
BstV1I GCAGC 3 cut(s) 722, 1059, 1223
BstX2I RGATCY 1 cut(s) 273
BstYI RGATCY 1 cut(s) 273
BsuI GTATCC 1 cut(s) 439
BsuRI GGCC 8 cut(s) 7, 159, 196, 777, 957, 981, 995, 1144
BtgZI GCGATG 1 cut(s) 1099
BtsCI GGATG 4 cut(s) 418, 514, 958, 1253
BtsI GCAGTG 2 cut(s) 343, 1011
BtsIMutI CAGTG 6 cut(s) 223, 343, 663, 844, 1011, 1050
BveI ACCTGC 3 cut(s) 328, 589, 840
Cac8I GCNNGC 2 cut(s) 47, 90
CaiI CAGNNNCTG 2 cut(s) 1022, 1157
CfoI GCGC 4 cut(s) 45, 90, 92, 152
Cfr13I GGNCC 7 cut(s) 6, 32, 416, 776, 805, 979, 993
Cfr9I CCCGGG 1 cut(s) 115
CseI GACGC 1 cut(s) 67
Csp6I GTAC 2 cut(s) 73, 1089
CviAII CATG 5 cut(s) 173, 563, 653, 720, 976
CviQI GTAC 2 cut(s) 73, 1089
DdeI CTNAG 6 cut(s) 558, 606, 836, 1080, 1102, 1158
DpnI GATC 2 cut(s) 275, 1128
DpnII GATC 2 cut(s) 273, 1126
DraI TTTAAA 1 cut(s) 531
EaeI YGGCCR 2 cut(s) 955, 1142
Eam1104I CTCTTC 1 cut(s) 246
EarI CTCTTC 1 cut(s) 246
Eco47I GGWCC 3 cut(s) 32, 416, 805
Eco72I CACGTG 2 cut(s) 584, 635
Eco88I CYCGRG 1 cut(s) 115
EcoRII CCWGG 2 cut(s) 518, 989
FaeI CATG 5 cut(s) 176, 566, 656, 723, 979
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FaqI GGGAC 1 cut(s) 18
FatI CATG 5 cut(s) 172, 562, 652, 719, 975
Fnu4HI GCNGC 4 cut(s) 26, 711, 1048, 1212
FokI GGATG 4 cut(s) 425, 501, 965, 1260
Fsp4HI GCNGC 4 cut(s) 26, 711, 1048, 1212
FspBI CTAG 4 cut(s) 714, 849, 986, 1285
FspI TGCGCA 1 cut(s) 44
GlaI GCGC 4 cut(s) 44, 89, 91, 151
GluI GCNGC 4 cut(s) 26, 711, 1048, 1212
GsuI CTGGAG 1 cut(s) 1198
HaeIII GGCC 8 cut(s) 7, 159, 196, 777, 957, 981, 995, 1144
HapII CCGG 4 cut(s) 20, 30, 50, 116
HgaI GACGC 1 cut(s) 67
HhaI GCGC 4 cut(s) 45, 90, 92, 152
Hin1I GRCGYC 1 cut(s) 78
Hin1II CATG 5 cut(s) 176, 566, 656, 723, 979
Hin6I GCGC 4 cut(s) 43, 88, 90, 150
HinP1I GCGC 4 cut(s) 43, 88, 90, 150
HinfI GANTC 3 cut(s) 127, 886, 1019
HpaII CCGG 4 cut(s) 20, 30, 50, 116
HphI GGTGA 1 cut(s) 559
Hpy166II GTNNAC 5 cut(s) 73, 638, 698, 766, 805
Hpy188I TCNGA 9 cut(s) 124, 132, 399, 487, 507, 866, 1105, 1159, 1171
Hpy188III TCNNGA 5 cut(s) 20, 97, 438, 644, 890
Hpy8I GTNNAC 5 cut(s) 73, 638, 698, 766, 805
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 2 cut(s) 56, 435
HpyCH4III ACNGT 2 cut(s) 650, 667
HpyCH4IV ACGT 3 cut(s) 583, 634, 1268
HpyF10VI GCNNNNNNNGC 9 cut(s) 13, 22, 147, 156, 226, 716, 783, 1044, 1211
HpyF3I CTNAG 6 cut(s) 558, 606, 836, 1080, 1102, 1158
HpySE526I ACGT 3 cut(s) 583, 634, 1268
Hsp92I GRCGYC 1 cut(s) 78
Hsp92II CATG 5 cut(s) 176, 566, 656, 723, 979
HspAI GCGC 4 cut(s) 43, 88, 90, 150
Kpn2I TCCGGA 1 cut(s) 19
Kzo9I GATC 2 cut(s) 273, 1126
LmnI GCTCC 5 cut(s) 22, 116, 234, 671, 1076
Lsp1109I GCAGC 3 cut(s) 722, 1059, 1223
LweI GCATC 4 cut(s) 144, 491, 679, 988
MaeI CTAG 4 cut(s) 714, 849, 986, 1285
MaeII ACGT 3 cut(s) 583, 634, 1268
MaeIII GTNAC 4 cut(s) 187, 382, 1009, 1181
MalI GATC 2 cut(s) 275, 1128
MbiI CCGCTC 1 cut(s) 1192
MboI GATC 2 cut(s) 273, 1126
MboII GAAGA 3 cut(s) 49, 233, 836
MfeI CAATTG 2 cut(s) 787, 818
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 1 cut(s) 700
MlsI TGGCCA 1 cut(s) 957
MluCI AATT 4 cut(s) 250, 400, 787, 818
MluNI TGGCCA 1 cut(s) 957
MlyI GAGTC 1 cut(s) 880
MmeI TCCRAC 1 cut(s) 649
MnlI CCTC 7 cut(s) 197, 324, 615, 651, 1033, 1124, 1197
Mox20I TGGCCA 1 cut(s) 957
MroI TCCGGA 1 cut(s) 19
MscI TGGCCA 1 cut(s) 957
MseI TTAA 4 cut(s) 287, 471, 530, 1122
Msp20I TGGCCA 1 cut(s) 957
MspCI CTTAAG 1 cut(s) 1121
MspI CCGG 4 cut(s) 20, 30, 50, 116
MspR9I CCNGG 5 cut(s) 30, 116, 117, 520, 991
MunI CAATTG 2 cut(s) 787, 818
MvaI CCWGG 2 cut(s) 520, 991
MvnI CGCG 1 cut(s) 90
MwoI GCNNNNNNNGC 9 cut(s) 13, 22, 147, 156, 226, 716, 783, 1044, 1211
NciI CCSGG 3 cut(s) 30, 116, 117
NdeII GATC 2 cut(s) 273, 1126
NlaIII CATG 5 cut(s) 176, 566, 656, 723, 979
NlaIV GGNNCC 5 cut(s) 24, 34, 112, 230, 603
NmeAIII GCCGAG 1 cut(s) 135
NmuCI GTSAC 2 cut(s) 382, 1009
NsbI TGCGCA 1 cut(s) 44
NspI RCATGY 1 cut(s) 176
NspV TTCGAA 1 cut(s) 60
PalAI GGCGCGCC 1 cut(s) 88
PauI GCGCGC 1 cut(s) 88
PfeI GAWTC 2 cut(s) 127, 1019
PkrI GCNGC 4 cut(s) 27, 712, 1049, 1213
PleI GAGTC 1 cut(s) 880
PmaCI CACGTG 2 cut(s) 584, 635
PmlI CACGTG 2 cut(s) 584, 635
PpsI GAGTC 1 cut(s) 880
Ppu21I YACGTR 3 cut(s) 584, 635, 1269
Psp6I CCWGG 2 cut(s) 518, 989
PspCI CACGTG 2 cut(s) 584, 635
PspGI CCWGG 2 cut(s) 518, 989
PspN4I GGNNCC 5 cut(s) 24, 34, 112, 230, 603
PspPI GGNCC 7 cut(s) 6, 32, 416, 776, 805, 979, 993
PsrI GAACNNNNNNTAC 2 cut(s) 486, 518
PstI CTGCAG 2 cut(s) 325, 1018
PstNI CAGNNNCTG 2 cut(s) 1022, 1157
PsuI RGATCY 1 cut(s) 273
PteI GCGCGC 1 cut(s) 88
RsaI GTAC 2 cut(s) 74, 1090
RsaNI GTAC 2 cut(s) 73, 1089
SaqAI TTAA 4 cut(s) 287, 471, 530, 1122
SatI GCNGC 4 cut(s) 26, 711, 1048, 1212
Sau3AI GATC 2 cut(s) 273, 1126
Sau96I GGNCC 7 cut(s) 6, 32, 416, 776, 805, 979, 993
SchI GAGTC 1 cut(s) 880
ScrFI CCNGG 5 cut(s) 30, 116, 117, 520, 991
SduI GDGCHC 1 cut(s) 700
SfaNI GCATC 4 cut(s) 144, 491, 679, 988
SfcI CTRYAG 3 cut(s) 321, 780, 1014
SfuI TTCGAA 1 cut(s) 60
SgsI GGCGCGCC 1 cut(s) 88
SinI GGWCC 3 cut(s) 32, 416, 805
SmaI CCCGGG 1 cut(s) 117
SmiI ATTTAAAT 1 cut(s) 531
SmlI CTYRAG 1 cut(s) 1121
SmoI CTYRAG 1 cut(s) 1121
Sse9I AATT 4 cut(s) 250, 400, 787, 818
SsiI CCGC 5 cut(s) 26, 66, 927, 1190, 1203
SspI AATATT 1 cut(s) 1165
SspMI CTAG 4 cut(s) 714, 849, 986, 1285
StyD4I CCNGG 5 cut(s) 28, 114, 115, 518, 989
SwaI ATTTAAAT 1 cut(s) 531
TaaI ACNGT 2 cut(s) 650, 667
TaiI ACGT 3 cut(s) 586, 637, 1271
TaqI TCGA 3 cut(s) 60, 1129, 1219
TasI AATT 4 cut(s) 250, 400, 787, 818
TatI WGTACW 1 cut(s) 1088
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 2 cut(s) 127, 1019
Tru1I TTAA 4 cut(s) 287, 471, 530, 1122
Tru9I TTAA 4 cut(s) 287, 471, 530, 1122
TscAI CASTG 6 cut(s) 230, 343, 670, 844, 1018, 1057
TseFI GTSAC 2 cut(s) 382, 1009
TseI GCWGC 3 cut(s) 710, 1047, 1211
Tsp45I GTSAC 2 cut(s) 382, 1009
TspDTI ATGAA 2 cut(s) 605, 1212
TspMI CCCGGG 1 cut(s) 115
TspRI CASTG 6 cut(s) 230, 343, 670, 844, 1018, 1057
Vha464I CTTAAG 1 cut(s) 1121
VneI GTGCAC 1 cut(s) 696
VpaK11BI GGWCC 3 cut(s) 32, 416, 805
XapI RAATTY 2 cut(s) 250, 400
XceI RCATGY 1 cut(s) 176
XmaI CCCGGG 1 cut(s) 115
XspI CTAG 4 cut(s) 714, 849, 986, 1285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.