Rh5BG318100

Mitochondrial fission protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0005245
Physical Location & Seq
Reverse (-)
42421839 .. 42428953
7115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG318100.1

Sequence Viewer

Length: 1227 bp
ATGGGGACGCCGGAAATCTTCGAAGGCGGCGTATACGGCGTCGTACGCCGCGCCGTCGTGATTGGCAACGGCTTCCCCGGTTCCGAGAATCAGAGTATCGGCCTGGTTCGCGCTCTCGGCCTCGCCGACAAGCACGTCGTGTATCGAGTTACAAGGCCAAGAGGAGGTCTAAATGAGTGGCTTCACTGGCTCCCGGTTTCTGTTCACAAGAAGTTGGATTGTGTCATAAGGAAGATGTGTATTTTGTTAATATATCGGGGGCAGAAAGTTGGGTCTCTACCAACAGAAAATGGTGGCAGTGCTGGGTTGAAATGTGTCTTAGAAGCTGATGTCCAGGAGATTGTAACCATGGCTCGTCAGACTTATGAAAAGGATGGACCCATACTGGTGGTAGCTTGTGGCAGGGATACTATTTCCATTGCAAGTTCTCTTAGACGACTAGCATCTGAAAACGTCTTTGTTGTACAGATACAACATCCTAGGTTGCATCTCAATAGATTTGACTTGGTTGTTACCCCGAAACACGATTACTATCCTTTGACCCCTGAAGCACAGAAGCAGGTTCCTCAATTTCTACGTGGGTGGATAACTCCTCGTGAACCTCCTGACAGGCATGTGGTCCTCACTATTGGAGCTTTGCATCAAATTGATGCTACTGCCCTTCGTAATGCTGCCAGTGCATGGCGTGATGAATTTGCAGCTCTACCAAAGCCCTTACTTGTGGCGAACATTGGTGGTCCTACAAGCAATTGTCGTTATGGTGTGGACCTTGCGAAGCAATTGGCAACCTATTTGCTTAGTGTTCTTGTAAGCTGTGGAAGCATCAGAATATGTTTCTCTAGTAGAACACCTGAAAAGGTATCCAATGTTATAACAAAGGAGCTCGGAGGTAATCCAAAAGTTTACATTTGGGATGGTCAAGAGCCAAACCCGTACATGGGCCATCTGGCCTGGGCTGATGCTTTTGTTGTCACCGCAGATTCCGTTAGCATGATAAGTGAGGTTTGCAGCACCGGGAAACCTGTGTATCTAATGGGAGCTGAGCGTTGTAAATGGAAGCTTTGTGATTTCCATAAATCACTCAAGGAGCGAGGAATGGTTCGGCCATTTACAGGCTTGGAGAATATTTCAGAGAGCTGGAGTTATCCACCGCTCAATGAAACTGCAGAAGCAGCGAGTCGAGTGCATCAAGCCCTTGCTGAACGGGGATGGAGATTGCGGGCATAG

Protein Analysis

408

Amino Acids

45.14

Weight (kDa)

9.1

Isoelectric Point (pI)

32.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_fiss_Elm1 PF06258 26 - 399 1e-109 Mitochondrial fission ELM1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 872
AasI GACNNNNNNGTC 1 cut(s) 134
Acc36I ACCTGC 1 cut(s) 550
AccB7I CCANNNNNTGG 1 cut(s) 681
AccBSI CCGCTC 1 cut(s) 1153
AccI GTMKAC 1 cut(s) 33
AccII CGCG 2 cut(s) 51, 111
AciI CCGC 5 cut(s) 27, 49, 975, 1151, 1219
AcoI YGGCCR 1 cut(s) 1103
AcsI RAATTY 1 cut(s) 692
AcuI CTGAAG 1 cut(s) 567
AcyI GRCGYC 2 cut(s) 8, 39
AdeI CACNNNGTG 1 cut(s) 139
AfaI GTAC 3 cut(s) 45, 465, 935
AfiI CCNNNNNNNGG 5 cut(s) 164, 681, 937, 938, 1112
AgsI TTSAA 1 cut(s) 310
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 3 cut(s) 102, 333, 950
AluBI AGCT 9 cut(s) 326, 395, 635, 701, 813, 883, 1040, 1060, 1137
AluI AGCT 9 cut(s) 326, 395, 635, 701, 813, 883, 1040, 1060, 1137
Alw21I GWGCWC 1 cut(s) 885
Alw26I GTCTC 1 cut(s) 279
AoxI GGCC 6 cut(s) 100, 118, 155, 940, 948, 1103
ApeKI GCWGC 4 cut(s) 671, 698, 1008, 1172
ApoI RAATTY 1 cut(s) 692
AspA2I CCTAGG 1 cut(s) 479
AspLEI GCGC 2 cut(s) 53, 113
AspS9I GGNCC 5 cut(s) 377, 619, 737, 766, 940
AsuC2I CCSGG 3 cut(s) 78, 194, 1015
AsuHPI GGTGA 1 cut(s) 964
AsuII TTCGAA 1 cut(s) 21
AvaII GGWCC 4 cut(s) 377, 619, 737, 766
AvrII CCTAGG 1 cut(s) 479
BaeI ACNNNNGTAYC 2 cut(s) 1010, 1043
BanII GRGCYC 1 cut(s) 885
BauI CACGAG 1 cut(s) 594
Bbv12I GWGCWC 1 cut(s) 885
BbvI GCAGC 4 cut(s) 658, 710, 1020, 1184
BccI CCATC 4 cut(s) 368, 908, 951, 1203
BceAI ACGGC 3 cut(s) 38, 52, 85
BcgI CGANNNNNNTGC 2 cut(s) 1165, 1199
BciT130I CCWGG 3 cut(s) 104, 335, 952
BciVI GTATCC 2 cut(s) 400, 871
BcnI CCSGG 3 cut(s) 78, 194, 1015
BcoDI GTCTC 1 cut(s) 279
BfaI CTAG 3 cut(s) 440, 480, 840
BfmI CTRYAG 1 cut(s) 1164
BfuAI ACCTGC 1 cut(s) 550
BfuI GTATCC 2 cut(s) 400, 871
BisI GCNGC 6 cut(s) 28, 49, 672, 699, 1009, 1173
BlnI CCTAGG 1 cut(s) 479
BlpI GCTNAGC 1 cut(s) 1041
BlsI GCNGC 6 cut(s) 29, 50, 673, 700, 1010, 1174
Bme1390I CCNGG 6 cut(s) 78, 104, 194, 335, 952, 1015
Bme18I GGWCC 4 cut(s) 377, 619, 737, 766
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 5 cut(s) 377, 619, 737, 766, 940
BmiI GGNNCC 4 cut(s) 82, 191, 379, 564
BmrFI CCNGG 6 cut(s) 78, 104, 194, 335, 952, 1015
BmsI GCATC 7 cut(s) 452, 496, 640, 649, 831, 949, 1195
BpmI CTGGAG 1 cut(s) 1159
Bpu1102I GCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 21
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 3 cut(s) 78, 194, 1015
BsaAI YACGTR 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 531
BsaHI GRCGYC 2 cut(s) 8, 39
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 4 cut(s) 76, 348, 479, 951
Bsc4I CCNNNNNNNGG 5 cut(s) 164, 681, 937, 938, 1112
Bse1I ACTGG 3 cut(s) 191, 390, 675
Bse3DI GCAATG 1 cut(s) 417
Bse8I GATNNNNATC 1 cut(s) 531
BseBI CCWGG 3 cut(s) 104, 335, 952
BseDI CCNNGG 4 cut(s) 76, 348, 479, 951
BseGI GGATG 4 cut(s) 379, 475, 919, 1214
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 5 cut(s) 164, 681, 937, 938, 1112
BseMI GCAATG 1 cut(s) 417
BseMII CTCAG 1 cut(s) 1032
BseNI ACTGG 3 cut(s) 191, 390, 675
BseRI GAGGAG 2 cut(s) 177, 582
BseXI GCAGC 4 cut(s) 658, 710, 1020, 1184
BseYI CCCAGC 1 cut(s) 302
Bsh1236I CGCG 2 cut(s) 51, 111
BshFI GGCC 6 cut(s) 102, 120, 157, 942, 950, 1105
BsiHKAI GWGCWC 1 cut(s) 885
BsiSI CCGG 4 cut(s) 11, 78, 194, 1014
BsiWI CGTACG 1 cut(s) 43
BslFI GGGAC 1 cut(s) 19
BslI CCNNNNNNNGG 5 cut(s) 164, 681, 937, 938, 1112
BsmAI GTCTC 1 cut(s) 279
BsmFI GGGAC 1 cut(s) 19
BsnI GGCC 6 cut(s) 102, 120, 157, 942, 950, 1105
Bso31I GGTCTC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 885
Bsp1407I TGTACA 1 cut(s) 463
Bsp1720I GCTNAGC 1 cut(s) 1041
Bsp19I CCATGG 1 cut(s) 348
BspACI CCGC 5 cut(s) 27, 49, 975, 1151, 1219
BspANI GGCC 6 cut(s) 102, 120, 157, 942, 950, 1105
BspCNI CTCAG 1 cut(s) 1033
BspFNI CGCG 2 cut(s) 51, 111
BspLI GGNNCC 4 cut(s) 82, 191, 379, 564
BspMAI CTGCAG 1 cut(s) 1168
BspMI ACCTGC 1 cut(s) 550
BspT104I TTCGAA 1 cut(s) 21
BspTNI GGTCTC 1 cut(s) 279
BsrBI CCGCTC 1 cut(s) 1153
BsrDI GCAATG 1 cut(s) 417
BsrGI TGTACA 1 cut(s) 463
BsrI ACTGG 3 cut(s) 191, 390, 675
BssECI CCNNGG 4 cut(s) 76, 348, 479, 951
BssNAI GTATAC 1 cut(s) 34
BssNI GRCGYC 2 cut(s) 8, 39
BssSI CACGAG 1 cut(s) 594
BssT1I CCWWGG 2 cut(s) 348, 479
Bst1107I GTATAC 1 cut(s) 34
Bst2BI CACGAG 1 cut(s) 594
Bst2UI CCWGG 3 cut(s) 104, 335, 952
BstACI GRCGYC 2 cut(s) 8, 39
BstAUI TGTACA 1 cut(s) 463
BstBAI YACGTR 1 cut(s) 578
BstBI TTCGAA 1 cut(s) 21
BstC8I GCNNGC 1 cut(s) 1221
BstDEI CTNAG 4 cut(s) 319, 431, 797, 1041
BstDSI CCRYGG 1 cut(s) 348
BstF5I GGATG 4 cut(s) 379, 475, 919, 1214
BstFNI CGCG 2 cut(s) 51, 111
BstHHI GCGC 2 cut(s) 53, 113
BstMAI GTCTC 1 cut(s) 279
BstMWI GCNNNNNNNGC 8 cut(s) 36, 45, 108, 117, 187, 677, 819, 1172
BstNI CCWGG 3 cut(s) 104, 335, 952
BstNSI RCATGY 1 cut(s) 617
BstSCI CCNGG 6 cut(s) 76, 102, 192, 333, 950, 1013
BstSFI CTRYAG 1 cut(s) 1164
BstUI CGCG 2 cut(s) 51, 111
BstV1I GCAGC 4 cut(s) 658, 710, 1020, 1184
BstXI CCANNNNNNTGG 1 cut(s) 388
BstZ17I GTATAC 1 cut(s) 34
BsuI GTATCC 2 cut(s) 400, 871
BsuRI GGCC 6 cut(s) 102, 120, 157, 942, 950, 1105
BtgI CCRYGG 1 cut(s) 348
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 4 cut(s) 379, 475, 919, 1214
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 3 cut(s) 184, 304, 682
BveI ACCTGC 1 cut(s) 550
Cac8I GCNNGC 1 cut(s) 1221
CfoI GCGC 2 cut(s) 53, 113
Cfr13I GGNCC 5 cut(s) 377, 619, 737, 766, 940
CseI GACGC 2 cut(s) 16, 28
Csp6I GTAC 3 cut(s) 44, 464, 934
CviAII CATG 5 cut(s) 349, 614, 681, 937, 991
CviQI GTAC 3 cut(s) 44, 464, 934
DdeI CTNAG 4 cut(s) 319, 431, 797, 1041
DraIII CACNNNGTG 1 cut(s) 139
DrdI GACNNNNNNGTC 1 cut(s) 134
DseDI GACNNNNNNGTC 1 cut(s) 134
EaeI YGGCCR 1 cut(s) 1103
Ecl136II GAGCTC 1 cut(s) 883
Eco130I CCWWGG 2 cut(s) 348, 479
Eco24I GRGCYC 1 cut(s) 885
Eco31I GGTCTC 1 cut(s) 279
Eco47I GGWCC 4 cut(s) 377, 619, 737, 766
Eco53kI GAGCTC 1 cut(s) 883
Eco57I CTGAAG 1 cut(s) 567
EcoICRI GAGCTC 1 cut(s) 883
EcoRII CCWGG 3 cut(s) 102, 333, 950
EcoT14I CCWWGG 2 cut(s) 348, 479
EcoT38I GRGCYC 1 cut(s) 885
ErhI CCWWGG 2 cut(s) 348, 479
FaeI CATG 5 cut(s) 352, 617, 684, 940, 994
FaqI GGGAC 1 cut(s) 19
FatI CATG 5 cut(s) 348, 613, 680, 936, 990
FauI CCCGC 1 cut(s) 1212
FblI GTMKAC 1 cut(s) 33
Fnu4HI GCNGC 6 cut(s) 28, 49, 672, 699, 1009, 1173
FokI GGATG 4 cut(s) 386, 462, 926, 1221
FriOI GRGCYC 1 cut(s) 885
Fsp4HI GCNGC 6 cut(s) 28, 49, 672, 699, 1009, 1173
FspBI CTAG 3 cut(s) 440, 480, 840
GlaI GCGC 2 cut(s) 52, 112
GluI GCNGC 6 cut(s) 28, 49, 672, 699, 1009, 1173
GsaI CCCAGC 1 cut(s) 306
GsuI CTGGAG 1 cut(s) 1159
HaeIII GGCC 6 cut(s) 102, 120, 157, 942, 950, 1105
HapII CCGG 4 cut(s) 11, 78, 194, 1014
HgaI GACGC 2 cut(s) 16, 28
HhaI GCGC 2 cut(s) 53, 113
Hin1I GRCGYC 2 cut(s) 8, 39
Hin1II CATG 5 cut(s) 352, 617, 684, 940, 994
Hin6I GCGC 2 cut(s) 51, 111
HinP1I GCGC 2 cut(s) 51, 111
HindIII AAGCTT 1 cut(s) 1058
HinfI GANTC 3 cut(s) 88, 980, 1177
HpaII CCGG 4 cut(s) 11, 78, 194, 1014
HphI GGTGA 1 cut(s) 964
Hpy166II GTNNAC 5 cut(s) 34, 205, 599, 766, 904
Hpy188I TCNGA 7 cut(s) 85, 93, 360, 448, 827, 887, 1132
Hpy188III TCNNGA 4 cut(s) 58, 596, 605, 920
Hpy8I GTNNAC 5 cut(s) 34, 205, 599, 766, 904
Hpy99I CGWCG 3 cut(s) 44, 59, 140
HpyAV CCTTC 2 cut(s) 17, 671
HpyCH4IV ACGT 3 cut(s) 135, 453, 577
HpyCH4V TGCA 8 cut(s) 422, 487, 640, 680, 698, 1008, 1166, 1186
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 45, 108, 117, 187, 677, 819, 1172
HpyF3I CTNAG 4 cut(s) 319, 431, 797, 1041
HpySE526I ACGT 3 cut(s) 135, 453, 577
Hsp92I GRCGYC 2 cut(s) 8, 39
Hsp92II CATG 5 cut(s) 352, 617, 684, 940, 994
HspAI GCGC 2 cut(s) 51, 111
LmnI GCTCC 5 cut(s) 195, 632, 880, 1037, 1087
Lsp1109I GCAGC 4 cut(s) 658, 710, 1020, 1184
LweI GCATC 7 cut(s) 452, 496, 640, 649, 831, 949, 1195
MaeI CTAG 3 cut(s) 440, 480, 840
MaeII ACGT 3 cut(s) 135, 453, 577
MaeIII GTNAC 4 cut(s) 148, 343, 511, 970
MbiI CCGCTC 1 cut(s) 1153
MboII GAAGA 2 cut(s) 10, 244
MfeI CAATTG 2 cut(s) 748, 779
MhlI GDGCHC 1 cut(s) 885
MluCI AATT 5 cut(s) 569, 645, 692, 748, 779
MlyI GAGTC 1 cut(s) 1186
MmeI TCCRAC 1 cut(s) 195
MseI TTAA 1 cut(s) 248
MslI CAYNNNNRTG 1 cut(s) 386
MspI CCGG 4 cut(s) 11, 78, 194, 1014
MspR9I CCNGG 6 cut(s) 78, 104, 194, 335, 952, 1015
MunI CAATTG 2 cut(s) 748, 779
MvaI CCWGG 3 cut(s) 104, 335, 952
MvnI CGCG 2 cut(s) 51, 111
MwoI GCNNNNNNNGC 8 cut(s) 36, 45, 108, 117, 187, 677, 819, 1172
NciI CCSGG 3 cut(s) 78, 194, 1015
NcoI CCATGG 1 cut(s) 348
NlaIII CATG 5 cut(s) 352, 617, 684, 940, 994
NlaIV GGNNCC 4 cut(s) 82, 191, 379, 564
NmeAIII GCCGAG 1 cut(s) 96
NmuCI GTSAC 1 cut(s) 970
NspI RCATGY 1 cut(s) 617
NspV TTCGAA 1 cut(s) 21
PcsI WCGNNNNNNNCGW 2 cut(s) 27, 123
PfeI GAWTC 2 cut(s) 88, 980
Pfl23II CGTACG 1 cut(s) 43
PflMI CCANNNNNTGG 1 cut(s) 681
PfoI TCCNGGA 1 cut(s) 333
PkrI GCNGC 6 cut(s) 29, 50, 673, 700, 1010, 1174
PleI GAGTC 1 cut(s) 1185
PpsI GAGTC 1 cut(s) 1185
Ppu21I YACGTR 1 cut(s) 578
PsiI TTATAA 1 cut(s) 872
Psp124BI GAGCTC 1 cut(s) 885
Psp6I CCWGG 3 cut(s) 102, 333, 950
PspFI CCCAGC 1 cut(s) 302
PspGI CCWGG 3 cut(s) 102, 333, 950
PspLI CGTACG 1 cut(s) 43
PspN4I GGNNCC 4 cut(s) 82, 191, 379, 564
PspPI GGNCC 5 cut(s) 377, 619, 737, 766, 940
PstI CTGCAG 1 cut(s) 1168
RsaI GTAC 3 cut(s) 45, 465, 935
RsaNI GTAC 3 cut(s) 44, 464, 934
RseI CAYNNNNRTG 1 cut(s) 386
SacI GAGCTC 1 cut(s) 885
SaqAI TTAA 1 cut(s) 248
SatI GCNGC 6 cut(s) 28, 49, 672, 699, 1009, 1173
Sau96I GGNCC 5 cut(s) 377, 619, 737, 766, 940
SchI GAGTC 1 cut(s) 1186
ScrFI CCNGG 6 cut(s) 78, 104, 194, 335, 952, 1015
SduI GDGCHC 1 cut(s) 885
SfaNI GCATC 7 cut(s) 452, 496, 640, 649, 831, 949, 1195
SfcI CTRYAG 1 cut(s) 1164
SfuI TTCGAA 1 cut(s) 21
SinI GGWCC 4 cut(s) 377, 619, 737, 766
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
Sse9I AATT 5 cut(s) 569, 645, 692, 748, 779
SsiI CCGC 5 cut(s) 27, 49, 975, 1151, 1219
SspI AATATT 1 cut(s) 1126
SspMI CTAG 3 cut(s) 440, 480, 840
SstI GAGCTC 1 cut(s) 885
StyD4I CCNGG 6 cut(s) 76, 102, 192, 333, 950, 1013
StyI CCWWGG 2 cut(s) 348, 479
TaiI ACGT 3 cut(s) 138, 456, 580
TaqI TCGA 3 cut(s) 21, 145, 1180
TasI AATT 5 cut(s) 569, 645, 692, 748, 779
TatI WGTACW 1 cut(s) 463
TauI GCSGC 2 cut(s) 30, 51
TfiI GAWTC 2 cut(s) 88, 980
Tru1I TTAA 1 cut(s) 248
Tru9I TTAA 1 cut(s) 248
TscAI CASTG 3 cut(s) 191, 304, 682
TseFI GTSAC 1 cut(s) 970
TseI GCWGC 4 cut(s) 671, 698, 1008, 1172
Tsp45I GTSAC 1 cut(s) 970
TspDTI ATGAA 3 cut(s) 381, 705, 1173
TspGWI ACGGA 1 cut(s) 973
TspRI CASTG 3 cut(s) 191, 304, 682
Van91I CCANNNNNTGG 1 cut(s) 681
VpaK11BI GGWCC 4 cut(s) 377, 619, 737, 766
XapI RAATTY 1 cut(s) 692
XceI RCATGY 1 cut(s) 617
XmaJI CCTAGG 1 cut(s) 479
XmiI GTMKAC 1 cut(s) 33
XspI CTAG 3 cut(s) 440, 480, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.