pycom11g22400

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
25402825 .. 25404990
2166 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1740 bp
ATGGGCAAGTCCTCTTCTTCTCGTACAAAGAAGCGCTCCAAGGTTTCCTCCGAGGCTCGAACAAGGAAGAAGAGTAAGAGTAAGACTAAAACAAGGAAATATAGATCCAAGAAGCTTCGCCGTCGTGACGATTCTTCTTCTTATTCCGGTGAGGATGATTCAAGAAGTTTGGAATCGTTATCGTCTTTTAGCTCAGATGATGATTTGAGAAGTAGAAGGGCTCGATCGCGCGTTAGGAAGGATGCAAAAGGGAGCAAGAAGAGGGCTCGGAGACGATCTTATAGCCCTGACAGCAGCGAGGACTCTCCTCGTAGAAAGAAGAGGAAATTGGCAAAGAAGAAGAATGATAAGAAAACCCATTTGAGGAAGAAGCCTAGTAGCAATGCTAGCGTTAGTTCCAGGAGTAGCGCGTCATTTAGGTGCTCAACTTGTCCTAGTGAGAGTATTAGCAGTGATGAGATTGAATCTAAGAGGCATAGGGGCAGACCTGGAAAACGAAACAGAGATGACAGTGGGATTAACAAGGTTGAAAGTGGGACTAAGAAGGCTAGGTATAGGTCAAGGAGTTGTTCTTTGCGCAGTCAGCGTAGCGAGAGTGGTGATTGTCGGAATGAGGAAAAAGTGACATATGAGAACAATACGAGGAGGTTGAGATCTGTAGTTACGGTAGCAGAAGAAAACGAACATGGAAGGTGGATGGATACAGATGCGCACAAAGAAGAGATTACATATGATGACGATTACCCTTCTTGTAGGAGTAATGATAGTAATGATGGAGGGGGCAAGAGGGAGTTGGATGATCGTTTAGATGTTGCATTTGAGAAGAGAATGGAAGTAGAGAGTGGGAAAGAGGAAGAAGCTTATGTTTCTAATGTTCTAATCATGGATCTCAAAGATAGTCGTAACATTTTGGAAAAAGATTGTACGGGCCAAGATGATGGAATCGGGATTACTGGTTCTGTTAATGAAAATAAGAACGAGGTTTCTGGGGCAATCAGTAGTCTGCCAGGTGAGGATCTGGAATCAATTTTAAGACAAAGGGCTTTGGAAAATCTAAAAAGGTTCAAAGGAAAGCATCAAAGAATTTCAGCGGTAACTACCAATCAGGAAGACAAGACCGATATTGATTTGAAACAGCCATCCACTGCAAAGGTTGAATTGTTTCAAATAGAATCCCCGAGGGAGAGTGGTGGTAGAGTGGTTGTAGCAAAGTCATCCGAGGACGATGTTGCTAAAAGGGTTGATACAACCCAATCAGTAGAAGGGGCCAATGGGCCTCAAGAGAGAGTTTCCATTCTTTCTTCCCAAAACCTGGAAAAGCAAGATGTTGCTTGTCCAATAGAGCAAGTGGTTGTCGGCAGAAAGGTTAAGACCACTGCTGCGGTCTATAAACCAAACTCGACTTCACCAACATTGAGGGGTCATTCACTAAAAGCTCACCCCACGCTGAAACAAGAACCTGCTTCACAGGAACCTCCTGAGGAAGGATTGTTGGTGAGTGAGAGTAATGTGGATAAGGGTGCTTCTGGGATTGCCCAAACTGTGCCCCAAAGCAGCCATAGAAACGGCGAAGGTATCAAACAGAGTTCTGATAAACAGCAAGATGAAGCTACAGATGGCTCACAGTTTGAGCAGAAAACAATGTCGGTGATGCGAGGTAGTGAAATGGTACAGGTGAGTTACAAGGTTTACATCCCTAAGAAAGCTCCTGCTCTGGCGAGGAGGCAACTCAAGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

580

Amino Acids

64.79

Weight (kDa)

9.72

Isoelectric Point (pI)

76.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 578, 711
Acc36I ACCTGC 1 cut(s) 1468
AccB7I CCANNNNNTGG 1 cut(s) 1312
AccII CGCG 3 cut(s) 229, 231, 410
AciI CCGC 3 cut(s) 1091, 1382, 1735
AclWI GGATC 3 cut(s) 99, 894, 1023
AcsI RAATTY 1 cut(s) 1083
AfaI GTAC 3 cut(s) 25, 925, 1671
AfeI AGCGCT 1 cut(s) 35
AfiI CCNNNNNNNGG 3 cut(s) 363, 1312, 1484
AgsI TTSAA 7 cut(s) 162, 464, 530, 1066, 1132, 1157, 1166
AjnI CCWGG 4 cut(s) 398, 487, 1006, 1311
AjuI GAANNNNNNNTTGG 4 cut(s) 311, 343, 1387, 1419
AloI GAACNNNNNNTCC 2 cut(s) 940, 972
AluBI AGCT 6 cut(s) 115, 192, 860, 1436, 1610, 1706
AluI AGCT 6 cut(s) 115, 192, 860, 1436, 1610, 1706
Alw21I GWGCWC 1 cut(s) 425
Alw26I GTCTC 1 cut(s) 265
AlwI GGATC 3 cut(s) 99, 894, 1023
Ama87I CYCGRG 1 cut(s) 1177
Aor51HI AGCGCT 1 cut(s) 35
AoxI GGCC 3 cut(s) 928, 1266, 1274
ApeKI GCWGC 3 cut(s) 294, 1379, 1554
ApoI RAATTY 1 cut(s) 1083
Asp700I GAANNNNTTC 1 cut(s) 1161
AspLEI GCGC 5 cut(s) 36, 231, 410, 579, 712
AspS9I GGNCC 3 cut(s) 928, 1266, 1274
AsuHPI GGTGA 8 cut(s) 161, 611, 1022, 1398, 1430, 1507, 1660, 1687
AsuNHI GCTAGC 1 cut(s) 386
AvaI CYCGRG 1 cut(s) 1177
AxyI CCTNAGG 1 cut(s) 1479
BaeGI GKGCMC 1 cut(s) 1548
BanII GRGCYC 2 cut(s) 223, 268
BbsI GAAGAC 1 cut(s) 1116
Bbv12I GWGCWC 1 cut(s) 425
BbvI GCAGC 3 cut(s) 306, 1366, 1566
BccI CCATC 5 cut(s) 691, 767, 932, 1147, 1610
BceAI ACGGC 2 cut(s) 105, 1582
BciT130I CCWGG 4 cut(s) 400, 489, 1008, 1313
BciVI GTATCC 1 cut(s) 694
BcoDI GTCTC 1 cut(s) 265
BfaI CTAG 4 cut(s) 375, 387, 435, 549
BfmI CTRYAG 2 cut(s) 657, 1611
BfoI RGCGCY 1 cut(s) 37
BfuAI ACCTGC 1 cut(s) 1468
BfuI GTATCC 1 cut(s) 694
BglII AGATCT 1 cut(s) 653
BisI GCNGC 3 cut(s) 295, 1380, 1555
BlsI GCNGC 3 cut(s) 296, 1381, 1556
Bme1390I CCNGG 4 cut(s) 400, 489, 1008, 1313
BmeT110I CYCGRG 1 cut(s) 1177
BmgT120I GGNCC 3 cut(s) 928, 1266, 1274
BmiI GGNNCC 2 cut(s) 1267, 1473
BmrFI CCNGG 4 cut(s) 400, 489, 1008, 1313
BmsI GCATC 4 cut(s) 232, 697, 1084, 1641
BmtI GCTAGC 1 cut(s) 390
BpiI GAAGAC 1 cut(s) 1116
BpuEI CTTGAG 2 cut(s) 1263, 1715
BsaJI CCNNGG 4 cut(s) 39, 51, 1178, 1218
BsaWI WCCGGW 1 cut(s) 146
Bsc4I CCNNNNNNNGG 3 cut(s) 363, 1312, 1484
Bse1I ACTGG 1 cut(s) 958
Bse21I CCTNAGG 1 cut(s) 1479
Bse3DI GCAATG 1 cut(s) 388
BseBI CCWGG 4 cut(s) 400, 489, 1008, 1313
BseDI CCNNGG 4 cut(s) 39, 51, 1178, 1218
BseGI GGATG 7 cut(s) 160, 247, 702, 802, 1139, 1214, 1692
BseLI CCNNNNNNNGG 3 cut(s) 363, 1312, 1484
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 2 cut(s) 207, 1470
BseNI ACTGG 1 cut(s) 958
BseRI GAGGAG 3 cut(s) 297, 658, 1735
BseSI GKGCMC 1 cut(s) 1548
BseXI GCAGC 3 cut(s) 306, 1366, 1566
Bsh1236I CGCG 3 cut(s) 229, 231, 410
Bsh1285I CGRYCG 1 cut(s) 227
BshFI GGCC 3 cut(s) 930, 1268, 1276
BsiEI CGRYCG 1 cut(s) 227
BsiHKAI GWGCWC 1 cut(s) 425
BsiHKCI CYCGRG 1 cut(s) 1177
BsiSI CCGG 1 cut(s) 147
BslFI GGGAC 1 cut(s) 550
BslI CCNNNNNNNGG 3 cut(s) 363, 1312, 1484
BsmAI GTCTC 1 cut(s) 265
BsmBI CGTCTC 1 cut(s) 265
BsmFI GGGAC 1 cut(s) 550
BsnI GGCC 3 cut(s) 930, 1268, 1276
BsoBI CYCGRG 1 cut(s) 1177
Bsp1286I GDGCHC 4 cut(s) 223, 268, 425, 1548
Bsp143I GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
BspACI CCGC 3 cut(s) 1091, 1382, 1735
BspANI GGCC 3 cut(s) 930, 1268, 1276
BspCNI CTCAG 2 cut(s) 206, 1471
BspFNI CGCG 3 cut(s) 229, 231, 410
BspLI GGNNCC 2 cut(s) 1267, 1473
BspMI ACCTGC 1 cut(s) 1468
BspOI GCTAGC 1 cut(s) 390
BspPI GGATC 3 cut(s) 99, 894, 1023
BsrDI GCAATG 1 cut(s) 388
BsrI ACTGG 1 cut(s) 958
BssECI CCNNGG 4 cut(s) 39, 51, 1178, 1218
BssMI GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
BssT1I CCWWGG 1 cut(s) 39
Bst2UI CCWGG 4 cut(s) 400, 489, 1008, 1313
Bst4CI ACNGT 4 cut(s) 512, 667, 1543, 1626
Bst6I CTCTTC 6 cut(s) 19, 65, 254, 314, 714, 818
BstC8I GCNNGC 1 cut(s) 388
BstDEI CTNAG 5 cut(s) 193, 468, 540, 1479, 1698
BstENI CCTNNNNNAGG 1 cut(s) 1482
BstF5I GGATG 7 cut(s) 160, 247, 702, 802, 1139, 1214, 1692
BstFNI CGCG 3 cut(s) 229, 231, 410
BstH2I RGCGCY 1 cut(s) 37
BstHHI GCGC 5 cut(s) 36, 231, 410, 579, 712
BstKTI GATC 7 cut(s) 107, 227, 278, 656, 802, 889, 1018
BstMAI GTCTC 1 cut(s) 265
BstMBI GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
BstMCI CGRYCG 1 cut(s) 227
BstMWI GCNNNNNNNGC 4 cut(s) 291, 387, 583, 1732
BstNI CCWGG 4 cut(s) 400, 489, 1008, 1313
BstSCI CCNGG 4 cut(s) 398, 487, 1006, 1311
BstSFI CTRYAG 2 cut(s) 657, 1611
BstSLI GKGCMC 1 cut(s) 1548
BstUI CGCG 3 cut(s) 229, 231, 410
BstV1I GCAGC 3 cut(s) 306, 1366, 1566
BstV2I GAAGAC 1 cut(s) 1116
BstX2I RGATCY 4 cut(s) 104, 653, 886, 1015
BstXI CCANNNNNNTGG 1 cut(s) 938
BstYI RGATCY 4 cut(s) 104, 653, 886, 1015
Bsu36I CCTNAGG 1 cut(s) 1479
BsuI GTATCC 1 cut(s) 694
BsuRI GGCC 3 cut(s) 930, 1268, 1276
BtsCI GGATG 7 cut(s) 160, 247, 702, 802, 1139, 1214, 1692
BtsI GCAGTG 3 cut(s) 457, 1143, 1374
BtsIMutI CAGTG 4 cut(s) 457, 517, 1143, 1374
BveI ACCTGC 1 cut(s) 1468
Cac8I GCNNGC 1 cut(s) 388
CfoI GCGC 5 cut(s) 36, 231, 410, 579, 712
Cfr13I GGNCC 3 cut(s) 928, 1266, 1274
CseI GACGC 1 cut(s) 399
Csp6I GTAC 3 cut(s) 24, 924, 1670
CviAII CATG 2 cut(s) 686, 883
CviQI GTAC 3 cut(s) 24, 924, 1670
DdeI CTNAG 5 cut(s) 193, 468, 540, 1479, 1698
DpnI GATC 7 cut(s) 106, 226, 277, 655, 801, 888, 1017
DpnII GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
Eam1104I CTCTTC 6 cut(s) 19, 65, 254, 314, 714, 818
EarI CTCTTC 6 cut(s) 19, 65, 254, 314, 714, 818
Eco130I CCWWGG 1 cut(s) 39
Eco24I GRGCYC 2 cut(s) 223, 268
Eco47III AGCGCT 1 cut(s) 35
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 1177
EcoNI CCTNNNNNAGG 1 cut(s) 1482
EcoRII CCWGG 4 cut(s) 398, 487, 1006, 1311
EcoT14I CCWWGG 1 cut(s) 39
EcoT38I GRGCYC 2 cut(s) 223, 268
ErhI CCWWGG 1 cut(s) 39
Esp3I CGTCTC 1 cut(s) 265
FaeI CATG 2 cut(s) 689, 886
FaqI GGGAC 1 cut(s) 550
FatI CATG 2 cut(s) 685, 882
FauNDI CATATG 2 cut(s) 628, 730
Fnu4HI GCNGC 3 cut(s) 295, 1380, 1555
FokI GGATG 7 cut(s) 167, 254, 709, 809, 1126, 1201, 1679
FriOI GRGCYC 2 cut(s) 223, 268
Fsp4HI GCNGC 3 cut(s) 295, 1380, 1555
FspAI RTGCGCAY 1 cut(s) 711
FspBI CTAG 4 cut(s) 375, 387, 435, 549
FspI TGCGCA 2 cut(s) 578, 711
GlaI GCGC 5 cut(s) 35, 230, 409, 578, 711
GluI GCNGC 3 cut(s) 295, 1380, 1555
HaeII RGCGCY 1 cut(s) 37
HaeIII GGCC 3 cut(s) 930, 1268, 1276
HapII CCGG 1 cut(s) 147
HgaI GACGC 1 cut(s) 399
HhaI GCGC 5 cut(s) 36, 231, 410, 579, 712
Hin1II CATG 2 cut(s) 689, 886
Hin6I GCGC 5 cut(s) 34, 229, 408, 577, 710
HinP1I GCGC 5 cut(s) 34, 229, 408, 577, 710
HindIII AAGCTT 2 cut(s) 113, 858
HinfI GANTC 8 cut(s) 131, 158, 173, 302, 464, 942, 1022, 1172
HpaII CCGG 1 cut(s) 147
HphI GGTGA 8 cut(s) 161, 611, 1022, 1398, 1430, 1507, 1660, 1687
Hpy166II GTNNAC 1 cut(s) 1690
Hpy188I TCNGA 6 cut(s) 52, 196, 270, 609, 1219, 1591
Hpy188III TCNNGA 7 cut(s) 125, 162, 946, 1019, 1106, 1280, 1478
Hpy8I GTNNAC 1 cut(s) 1690
Hpy99I CGWCG 1 cut(s) 126
HpyAV CCTTC 8 cut(s) 210, 232, 538, 684, 756, 1256, 1478, 1565
HpyCH4III ACNGT 4 cut(s) 512, 667, 1543, 1626
HpyCH4V TGCA 3 cut(s) 245, 815, 1148
HpyF10VI GCNNNNNNNGC 4 cut(s) 291, 387, 583, 1732
HpyF3I CTNAG 5 cut(s) 193, 468, 540, 1479, 1698
Hsp92II CATG 2 cut(s) 689, 886
HspAI GCGC 5 cut(s) 34, 229, 408, 577, 710
Kzo9I GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
LmnI GCTCC 3 cut(s) 41, 252, 1711
Lsp1109I GCAGC 3 cut(s) 306, 1366, 1566
LweI GCATC 4 cut(s) 232, 697, 1084, 1641
MaeI CTAG 4 cut(s) 375, 387, 435, 549
MaeIII GTNAC 6 cut(s) 125, 622, 661, 902, 1093, 1679
MalI GATC 7 cut(s) 106, 226, 277, 655, 801, 888, 1017
MboI GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
MflI RGATCY 4 cut(s) 104, 653, 886, 1015
MhlI GDGCHC 4 cut(s) 223, 268, 425, 1548
MluCI AATT 4 cut(s) 326, 1026, 1083, 1157
MlyI GAGTC 1 cut(s) 296
MmeI TCCRAC 2 cut(s) 587, 774
MroXI GAANNNNTTC 1 cut(s) 1161
MseI TTAA 4 cut(s) 519, 963, 1031, 1368
MslI CAYNNNNRTG 1 cut(s) 418
MspA1I CMGCKG 1 cut(s) 1091
MspI CCGG 1 cut(s) 147
MspR9I CCNGG 4 cut(s) 400, 489, 1008, 1313
MvaI CCWGG 4 cut(s) 400, 489, 1008, 1313
MvnI CGCG 3 cut(s) 229, 231, 410
MwoI GCNNNNNNNGC 4 cut(s) 291, 387, 583, 1732
NdeI CATATG 2 cut(s) 628, 730
NdeII GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
NheI GCTAGC 1 cut(s) 386
NlaIII CATG 2 cut(s) 689, 886
NlaIV GGNNCC 2 cut(s) 1267, 1473
NmuCI GTSAC 2 cut(s) 125, 622
NsbI TGCGCA 2 cut(s) 578, 711
PdmI GAANNNNTTC 1 cut(s) 1161
PfeI GAWTC 7 cut(s) 131, 158, 173, 464, 942, 1022, 1172
PflMI CCANNNNNTGG 1 cut(s) 1312
PfoI TCCNGGA 1 cut(s) 398
PkrI GCNGC 3 cut(s) 296, 1381, 1556
Ple19I CGATCG 1 cut(s) 227
PleI GAGTC 1 cut(s) 296
PpsI GAGTC 1 cut(s) 296
Psp6I CCWGG 4 cut(s) 398, 487, 1006, 1311
PspGI CCWGG 4 cut(s) 398, 487, 1006, 1311
PspN4I GGNNCC 2 cut(s) 1267, 1473
PspPI GGNCC 3 cut(s) 928, 1266, 1274
PsuI RGATCY 4 cut(s) 104, 653, 886, 1015
PvuI CGATCG 1 cut(s) 227
RsaI GTAC 3 cut(s) 25, 925, 1671
RsaNI GTAC 3 cut(s) 24, 924, 1670
RseI CAYNNNNRTG 1 cut(s) 418
SaqAI TTAA 4 cut(s) 519, 963, 1031, 1368
SatI GCNGC 3 cut(s) 295, 1380, 1555
Sau3AI GATC 7 cut(s) 104, 224, 275, 653, 799, 886, 1015
Sau96I GGNCC 3 cut(s) 928, 1266, 1274
SchI GAGTC 1 cut(s) 296
ScrFI CCNGG 4 cut(s) 400, 489, 1008, 1313
SduI GDGCHC 4 cut(s) 223, 268, 425, 1548
SfaNI GCATC 4 cut(s) 232, 697, 1084, 1641
SfcI CTRYAG 2 cut(s) 657, 1611
SmiMI CAYNNNNRTG 1 cut(s) 418
SmlI CTYRAG 2 cut(s) 1278, 1730
SmoI CTYRAG 2 cut(s) 1278, 1730
Sse9I AATT 4 cut(s) 326, 1026, 1083, 1157
SsiI CCGC 3 cut(s) 1091, 1382, 1735
SspMI CTAG 4 cut(s) 375, 387, 435, 549
StyD4I CCNGG 4 cut(s) 398, 487, 1006, 1311
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 4 cut(s) 512, 667, 1543, 1626
TaqI TCGA 3 cut(s) 58, 223, 1400
TaqII GACCGA 1 cut(s) 1133
TasI AATT 4 cut(s) 326, 1026, 1083, 1157
TfiI GAWTC 7 cut(s) 131, 158, 173, 464, 942, 1022, 1172
Tru1I TTAA 4 cut(s) 519, 963, 1031, 1368
Tru9I TTAA 4 cut(s) 519, 963, 1031, 1368
TscAI CASTG 4 cut(s) 457, 517, 1150, 1381
TseFI GTSAC 2 cut(s) 125, 622
TseI GCWGC 3 cut(s) 294, 1379, 1554
Tsp45I GTSAC 2 cut(s) 125, 622
TspDTI ATGAA 2 cut(s) 981, 1620
TspRI CASTG 4 cut(s) 457, 517, 1150, 1381
Van91I CCANNNNNTGG 1 cut(s) 1312
XagI CCTNNNNNAGG 1 cut(s) 1482
XapI RAATTY 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 1161
XspI CTAG 4 cut(s) 375, 387, 435, 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.