Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003604

Physical Location & Seq

Genomic Coordinates Forward (+)

540532 .. 546103

Gene Structure 5572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g00600.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGATAGGATTGGGGCTCAGGAGGATTTGGAATTAGAAAGGAGACTTGCAAAGAAACTCAAAGTGAAGGATGGGAAATTGAAGGGGGAGGATTTTGGCCTTAATGTGTTGTTTGAAGGGATCGTACCTGTTGATTCATTTGGCACAGAAGAAACGATCTATGCTGATGCATTACCTGTCAAAAAATCTAAGAATAGCGATTCACGCAAGAAACGTAAGAAAGATAAGTCATTGGAGGACAGGCTAGAAGGTGAGCTACCTTCTAGAGGAGTTCCAGAGGAGGCAGTAACTGATGGTGCAGAGGTGGAAATTGTAGATTTTCCTTCCAAGAAATCATTGAGGAAGAGAAATAAGAAGAGAAAGGTGCTAGAGGAATCTGAAGAAGCCAATGAAGGTGACATGACAGTTGATGTATCTAAGCAAATGGAGTCATGTGGTGCAGAGATGGCATCAGATAAGGTTCCCATGAAGGCACCTGAAAAATATGTTGCTCCTCAAAAGTATGTAGCTCCTCACTTAAGATCTCGTGCAGGGAATGAGCCAGAAGAGCATAGTCAGATTCGTAGACGCGTAAGAGGTCTTCTGAATAGGTTGTCTGAATCTAATGTGGAATCTATTACAGGAGACCTATCTGCTATTTTTCGTTCCATTCCTCGTGCAATTGCTTCTCAGATGTTCAGTGAGGAGGTTATATCATCTTGTGCTGGTGGTCCTCGTGGGAATGAACAATATGCTGCTGTTTTTGCTGCTCTTGTGGCAGGCATGGCCTGTTTAGTAGGAATGGACTTTGGTGCAAACCTTTTGGCATCACTTGCAAAAACCTTTGAGGACGAGTACCACAAAGAAGACAATATTTCGCTGAGAAATGTTACGCTTTTACTTTCATATTTATGCATATTTGGAGTTTGCTCGAGTGAATTGATATACGACTTTCTGGTTGTTTTGAGCAAGCGGTTAACCGAGGTTGATGTCTCTACCATACTGACAGTTTTACAAAGCTGTGGAATGAAAATAAGGGCCGATGATCCTCTTGCGATGAAAAACTTTATTCAAAGTGTTCAAAATAGAGTGAATGAGCTAAAAGCCTCCTGTGGAGATAACCAGGATAATATTAACGGCAAAAGAATGGAATTCATGCTTGAGACCATATTGGACATCAAGAACAACAAAAAAAGGCCTAAAGAGGATACTGCACAGCATACTAGGATAAAGAAATGGCTACAAAAGTTACGGGTAGAAGACAGTTTAATAAGAGGGCTTAAATGGAGCAAACTTCTTGATTCTAATAAGAAGGGCCAATGGTGGTTGTCTGGGGATATTGCCTCAGCAACAGACACTATCGAAGATGTTGCCAACACAATAGACAAAGAGGTTCTTGAAACCCAGAAAATGCTGCAGATTGCTGCTGCACAGAGAATGAACACAGATGCCAGAAGGGCAATCTTTTGTATAATTATGAGTGCGGAGGATTATCTTGATGCGTTTGAGAAGCTTCTAAGATTGGATTTGCCTGGAAAGCAGGACAGGGAGATCATCAGGGTTCTTGTGGACTGCTGTTTGCAGGAGAAAGTGTTTAACAAGTATTACACCACTCTGGCTTCCAAGTTGTGTGAGCATGACAAAAATCACAAGTTCACTTTACAGTTTTGCCTTTGGGACCACTTTAAGGATCTGGAGTCAATGCCGCTTACCGGGTCAATGCACCTAGCAAAATTCGTAGCAGAGATGGTAGCCTCTTTCACCCTATCCCTTGCAGTATTGAAGACGGTAGATCTAGTCGACATTAAGCAGCTAACAGCAAAAAGGACAATGTATTTCCGGATGCTATTCGAGGCCATCTTCGAGTATCCCGACAGCCTCATATGGAACATATTCACGCGTGTAGCTGTTTCCCCGGAGCTCGAAAGTCTTCGGCACGGGATCGAGTTTTTCATCAAATATATTGTGGAAGCCAATAGAGCCCTCAAGGAAAAGTTTAAGCTCGCAAAGAAAGCCCTGAGTAATGTTGAAGGAGTTCTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005737 GO:0006139 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006349 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009507 GO:0009536 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009909 GO:0009987 GO:0010026 GO:0010154 GO:0010214 GO:0010468 GO:0016043 GO:0017053 GO:0019219 GO:0019222 GO:0022414 GO:0022607 GO:0030154 GO:0031323 GO:0031461 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051276 GO:0051726 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080008 GO:0080090 GO:0090558 GO:0090568 GO:0099402 GO:1901360 GO:1902494 GO:1990234 GO:2000026 GO:2000241 GO:2000653

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MA3 MIF4G

Protein Analysis

675

Amino Acids

76.37

Weight (kDa)

7.49

Isoelectric Point (pI)

48.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003604)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17930
fragaria_vesca	FvH4_2g11600 FvH4_2g11600 FvH4_2g11600 FvH4_2g11600
malus_domestica	MD12G1008000.v1.1
prunus_persica	Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1 Prupe.1G541500_v2.0.a1
pyrus_communis	pycom12g00600
rosa_chinensis	RchiOBHm_Chr5g0003011 RchiOBHm_Chr5g0003131 RchiOBHm_Chr6g0270841
rosa_laevigata	RLG00000013766 RLG00000029740 RLG00000030769
rosa_multiflora	Rmu_co8456101.1_g000001 Rmu_sc0000642.1_g000028 Rmu_sc0003683.1_g000002 Rmu_sc0005956.1_g000006
rosa_roxburghii	Rroxscaffold_7G00197590
rosa_rugosa	Rorug06G0056700 Rorug06G0056800
rosa_samantha	Rh1BG088600 Rh1DG121800 Rh6AG176100 Rh6BG179300 Rh6CG175500 Rh6DG167800
rosa_wichuraiana	Rw1G009430 Rw6G015000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	472
AccI	GTMKAC	2 cut(s)	565, 1779
AccII	CGCG	2 cut(s)	570, 1879
AccIII	TCCGGA	1 cut(s)	1818
AciI	CCGC	3 cut(s)	952, 1463, 1685
AclWI	GGATC	4 cut(s)	128, 1019, 1677, 1928
AcsI	RAATTY	2 cut(s)	1130, 1712
AcuI	CTGAAG	1 cut(s)	399
AfaI	GTAC	2 cut(s)	126, 836
AfiI	CCNNNNNNNGG	3 cut(s)	266, 1666, 1691
AflII	CTTAAG	1 cut(s)	517
AflIII	ACRYGT	2 cut(s)	568, 1877
AgsI	TTSAA	7 cut(s)	82, 116, 1052, 1061, 1379, 1762, 2009
AjnI	CCWGG	2 cut(s)	1101, 1510
AluBI	AGCT	9 cut(s)	256, 509, 999, 1078, 1492, 1792, 1886, 1900, 1981
AluI	AGCT	9 cut(s)	256, 509, 999, 1078, 1492, 1792, 1886, 1900, 1981
Alw21I	GWGCWC	1 cut(s)	1902
Alw26I	GTCTC	4 cut(s)	37, 618, 976, 1136
AlwI	GGATC	4 cut(s)	128, 1019, 1677, 1928
AlwNI	CAGNNNCTG	1 cut(s)	290
Ama87I	CYCGRG	1 cut(s)	910
Aor13HI	TCCGGA	1 cut(s)	1818
AoxI	GGCC	6 cut(s)	97, 765, 1017, 1175, 1294, 1833
ApeKI	GCWGC	6 cut(s)	734, 746, 1393, 1403, 1406, 1789
ApoI	RAATTY	2 cut(s)	1130, 1712
Asp700I	GAANNNNTTC	3 cut(s)	1871, 1908, 2013
AspS9I	GGNCC	4 cut(s)	710, 1017, 1294, 1657
AsuC2I	CCSGG	2 cut(s)	1693, 1895
AsuHPI	GGTGA	3 cut(s)	263, 407, 1732
AvaI	CYCGRG	1 cut(s)	910
AvaII	GGWCC	2 cut(s)	710, 1657
BanI	GGYRCC	1 cut(s)	472
BanII	GRGCYC	3 cut(s)	19, 1902, 1963
BarI	GAAGNNNNNNTAC	6 cut(s)	108, 140, 240, 272, 564, 596
BauI	CACGAG	3 cut(s)	525, 654, 714
BbsI	GAAGAC	5 cut(s)	572, 852, 1245, 1769, 1901
Bbv12I	GWGCWC	1 cut(s)	1902
BbvCI	CCTCAGC	1 cut(s)	1324
BbvI	GCAGC	6 cut(s)	721, 733, 1380, 1390, 1393, 1801
BccI	CCATC	5 cut(s)	65, 287, 439, 1720, 1844
BceAI	ACGGC	1 cut(s)	1132
BcgI	CGANNNNNNTGC	2 cut(s)	1331, 1365
BciT130I	CCWGG	2 cut(s)	1103, 1512
BciVI	GTATCC	2 cut(s)	1180, 1857
BcnI	CCSGG	2 cut(s)	1693, 1895
BcoDI	GTCTC	4 cut(s)	37, 618, 976, 1136
BfaI	CTAG	6 cut(s)	245, 264, 368, 1203, 1706, 1775
BfmI	CTRYAG	1 cut(s)	1394
BfrI	CTTAAG	1 cut(s)	517
BfuI	GTATCC	2 cut(s)	1180, 1857
BglI	GCCNNNNNGGC	1 cut(s)	1436
BglII	AGATCT	2 cut(s)	521, 1771
BisI	GCNGC	7 cut(s)	735, 747, 1394, 1404, 1407, 1685, 1790
BlsI	GCNGC	7 cut(s)	736, 748, 1395, 1405, 1408, 1686, 1791
Bme1390I	CCNGG	4 cut(s)	1103, 1512, 1693, 1895
Bme18I	GGWCC	2 cut(s)	710, 1657
BmeT110I	CYCGRG	1 cut(s)	910
BmgT120I	GGNCC	4 cut(s)	710, 1017, 1294, 1657
BmiI	GGNNCC	3 cut(s)	462, 474, 1658
BmrFI	CCNGG	4 cut(s)	1103, 1512, 1693, 1895
BmsI	GCATC	6 cut(s)	157, 458, 815, 1417, 1468, 1812
BpiI	GAAGAC	5 cut(s)	572, 852, 1245, 1769, 1901
BpmI	CTGGAG	1 cut(s)	1694
Bpu10I	CCTNAGC	2 cut(s)	18, 1324
BpuEI	CTTGAG	2 cut(s)	1160, 1949
BpuMI	CCSGG	2 cut(s)	1693, 1895
BsaI	GGTCTC	2 cut(s)	618, 1136
BsaJI	CCNNGG	2 cut(s)	960, 1893
BsaWI	WCCGGW	1 cut(s)	1818
BsaXI	ACNNNNNCTCC	2 cut(s)	1556, 1586
Bsc4I	CCNNNNNNNGG	3 cut(s)	266, 1666, 1691
BseAI	TCCGGA	1 cut(s)	1818
BseBI	CCWGG	2 cut(s)	1103, 1512
BseDI	CCNNGG	2 cut(s)	960, 1893
BseGI	GGATG	2 cut(s)	76, 1827
BseLI	CCNNNNNNNGG	3 cut(s)	266, 1666, 1691
BseMII	CTCAG	5 cut(s)	32, 683, 851, 1338, 1988
BseRI	GAGGAG	5 cut(s)	282, 293, 483, 501, 698
BseXI	GCAGC	6 cut(s)	721, 733, 1380, 1390, 1393, 1801
BsgI	GTGCAG	5 cut(s)	318, 459, 549, 1176, 1392
Bsh1236I	CGCG	2 cut(s)	570, 1879
BshFI	GGCC	6 cut(s)	99, 767, 1019, 1177, 1296, 1835
BshNI	GGYRCC	1 cut(s)	472
BsiHKAI	GWGCWC	1 cut(s)	1902
BsiHKCI	CYCGRG	1 cut(s)	910
BsiSI	CCGG	3 cut(s)	1692, 1819, 1895
BslFI	GGGAC	1 cut(s)	1670
BslI	CCNNNNNNNGG	3 cut(s)	266, 1666, 1691
BsmAI	GTCTC	4 cut(s)	37, 618, 976, 1136
BsmFI	GGGAC	1 cut(s)	1670
BsnI	GGCC	6 cut(s)	99, 767, 1019, 1177, 1296, 1835
Bso31I	GGTCTC	2 cut(s)	618, 1136
BsoBI	CYCGRG	1 cut(s)	910
Bsp1286I	GDGCHC	3 cut(s)	19, 1902, 1963
Bsp13I	TCCGGA	1 cut(s)	1818
Bsp143I	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
BspACI	CCGC	3 cut(s)	952, 1463, 1685
BspANI	GGCC	6 cut(s)	99, 767, 1019, 1177, 1296, 1835
BspCNI	CTCAG	5 cut(s)	31, 682, 852, 1337, 1989
BspEI	TCCGGA	1 cut(s)	1818
BspFNI	CGCG	2 cut(s)	570, 1879
BspLI	GGNNCC	3 cut(s)	462, 474, 1658
BspMAI	CTGCAG	1 cut(s)	1398
BspPI	GGATC	4 cut(s)	128, 1019, 1677, 1928
BspQI	GCTCTTC	1 cut(s)	540
BspT107I	GGYRCC	1 cut(s)	472
BspTI	CTTAAG	1 cut(s)	517
BspTNI	GGTCTC	2 cut(s)	618, 1136
BssECI	CCNNGG	2 cut(s)	960, 1893
BssMI	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
BssSI	CACGAG	3 cut(s)	525, 654, 714
Bst2BI	CACGAG	3 cut(s)	525, 654, 714
Bst2UI	CCWGG	2 cut(s)	1103, 1512
Bst4CI	ACNGT	5 cut(s)	406, 988, 1244, 1644, 1768
Bst6I	CTCTTC	3 cut(s)	338, 350, 540
BstAFI	CTTAAG	1 cut(s)	517
BstAPI	GCANNNNNTGC	1 cut(s)	812
BstC8I	GCNNGC	3 cut(s)	760, 950, 1983
BstDEI	CTNAG	8 cut(s)	18, 189, 417, 669, 860, 1324, 1496, 1997
BstENI	CCTNNNNNAGG	1 cut(s)	264
BstF5I	GGATG	2 cut(s)	76, 1827
BstFNI	CGCG	2 cut(s)	570, 1879
BstKTI	GATC	8 cut(s)	123, 159, 524, 1027, 1533, 1672, 1774, 1923
BstMAI	GTCTC	4 cut(s)	37, 618, 976, 1136
BstMBI	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
BstNI	CCWGG	2 cut(s)	1103, 1512
BstSCI	CCNGG	4 cut(s)	1101, 1510, 1691, 1893
BstSFI	CTRYAG	1 cut(s)	1394
BstUI	CGCG	2 cut(s)	570, 1879
BstV1I	GCAGC	6 cut(s)	721, 733, 1380, 1390, 1393, 1801
BstV2I	GAAGAC	5 cut(s)	572, 852, 1245, 1769, 1901
BstX2I	RGATCY	3 cut(s)	521, 1669, 1771
BstYI	RGATCY	3 cut(s)	521, 1669, 1771
BsuI	GTATCC	2 cut(s)	1180, 1857
BsuRI	GGCC	6 cut(s)	99, 767, 1019, 1177, 1296, 1835
BtgZI	GCGATG	1 cut(s)	1049
BtsCI	GGATG	2 cut(s)	76, 1827
BtsIMutI	CAGTG	1 cut(s)	685
Cac8I	GCNNGC	3 cut(s)	760, 950, 1983
CaiI	CAGNNNCTG	1 cut(s)	290
Cfr13I	GGNCC	4 cut(s)	710, 1017, 1294, 1657
CseI	GACGC	1 cut(s)	576
Csp6I	GTAC	2 cut(s)	125, 835
CviAII	CATG	6 cut(s)	400, 432, 466, 763, 1135, 1616
CviQI	GTAC	2 cut(s)	125, 835
DdeI	CTNAG	8 cut(s)	18, 189, 417, 669, 860, 1324, 1496, 1997
DpnI	GATC	8 cut(s)	122, 158, 523, 1026, 1532, 1671, 1773, 1922
DpnII	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
Eam1104I	CTCTTC	3 cut(s)	338, 350, 540
EarI	CTCTTC	3 cut(s)	338, 350, 540
Ecl136II	GAGCTC	1 cut(s)	1900
Eco147I	AGGCCT	1 cut(s)	1177
Eco24I	GRGCYC	3 cut(s)	19, 1902, 1963
Eco31I	GGTCTC	2 cut(s)	618, 1136
Eco47I	GGWCC	2 cut(s)	710, 1657
Eco53kI	GAGCTC	1 cut(s)	1900
Eco57I	CTGAAG	1 cut(s)	399
Eco88I	CYCGRG	1 cut(s)	910
EcoICRI	GAGCTC	1 cut(s)	1900
EcoNI	CCTNNNNNAGG	1 cut(s)	264
EcoRI	GAATTC	1 cut(s)	1130
EcoRII	CCWGG	2 cut(s)	1101, 1510
EcoT22I	ATGCAT	2 cut(s)	172, 896
EcoT38I	GRGCYC	3 cut(s)	19, 1902, 1963
FaeI	CATG	6 cut(s)	403, 435, 469, 766, 1138, 1619
FalI	AAGNNNNNCTT	2 cut(s)	1359, 1391
FaqI	GGGAC	1 cut(s)	1670
FatI	CATG	6 cut(s)	399, 431, 465, 762, 1134, 1615
FauNDI	CATATG	1 cut(s)	1862
FblI	GTMKAC	2 cut(s)	565, 1779
Fnu4HI	GCNGC	7 cut(s)	735, 747, 1394, 1404, 1407, 1685, 1790
FokI	GGATG	2 cut(s)	83, 1834
FriOI	GRGCYC	3 cut(s)	19, 1902, 1963
Fsp4HI	GCNGC	7 cut(s)	735, 747, 1394, 1404, 1407, 1685, 1790
FspBI	CTAG	6 cut(s)	245, 264, 368, 1203, 1706, 1775
GluI	GCNGC	7 cut(s)	735, 747, 1394, 1404, 1407, 1685, 1790
GsuI	CTGGAG	1 cut(s)	1694
HaeIII	GGCC	6 cut(s)	99, 767, 1019, 1177, 1296, 1835
HapII	CCGG	3 cut(s)	1692, 1819, 1895
HgaI	GACGC	1 cut(s)	576
Hin1II	CATG	6 cut(s)	403, 435, 469, 766, 1138, 1619
HincII	GTYRAC	2 cut(s)	957, 1780
HindII	GTYRAC	2 cut(s)	957, 1780
HindIII	AAGCTT	1 cut(s)	1490
HinfI	GANTC	9 cut(s)	134, 200, 374, 428, 559, 599, 611, 1280, 1676
HpaI	GTTAAC	1 cut(s)	957
HpaII	CCGG	3 cut(s)	1692, 1819, 1895
HphI	GGTGA	3 cut(s)	263, 407, 1732
Hpy166II	GTNNAC	5 cut(s)	566, 957, 1549, 1635, 1780
Hpy188I	TCNGA	7 cut(s)	379, 454, 558, 585, 598, 672, 2019
Hpy8I	GTNNAC	5 cut(s)	566, 957, 1549, 1635, 1780
HpyCH4III	ACNGT	5 cut(s)	406, 988, 1244, 1644, 1768
HpyCH4IV	ACGT	1 cut(s)	214
HpyF3I	CTNAG	8 cut(s)	18, 189, 417, 669, 860, 1324, 1496, 1997
HpySE526I	ACGT	1 cut(s)	214
Hsp92II	CATG	6 cut(s)	403, 435, 469, 766, 1138, 1619
Kpn2I	TCCGGA	1 cut(s)	1818
KspAI	GTTAAC	1 cut(s)	957
Kzo9I	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
LguI	GCTCTTC	1 cut(s)	540
LmnI	GCTCC	4 cut(s)	496, 514, 1266, 1897
Lsp1109I	GCAGC	6 cut(s)	721, 733, 1380, 1390, 1393, 1801
LweI	GCATC	6 cut(s)	157, 458, 815, 1417, 1468, 1812
MaeI	CTAG	6 cut(s)	245, 264, 368, 1203, 1706, 1775
MaeII	ACGT	1 cut(s)	214
MaeIII	GTNAC	4 cut(s)	286, 395, 868, 1227
MalI	GATC	8 cut(s)	122, 158, 523, 1026, 1532, 1671, 1773, 1922
MboI	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
MfeI	CAATTG	1 cut(s)	660
MflI	RGATCY	3 cut(s)	521, 1669, 1771
MhlI	GDGCHC	3 cut(s)	19, 1902, 1963
MluCI	AATT	8 cut(s)	32, 77, 309, 660, 917, 1130, 1452, 1712
MluI	ACGCGT	2 cut(s)	568, 1877
MlyI	GAGTC	2 cut(s)	437, 1685
Mph1103I	ATGCAT	2 cut(s)	172, 896
MroI	TCCGGA	1 cut(s)	1818
MroXI	GAANNNNTTC	3 cut(s)	1871, 1908, 2013
MslI	CAYNNNNRTG	1 cut(s)	889
MspCI	CTTAAG	1 cut(s)	517
MspI	CCGG	3 cut(s)	1692, 1819, 1895
MspR9I	CCNGG	4 cut(s)	1103, 1512, 1693, 1895
MunI	CAATTG	1 cut(s)	660
MvaI	CCWGG	2 cut(s)	1103, 1512
MvnI	CGCG	2 cut(s)	570, 1879
NciI	CCSGG	2 cut(s)	1693, 1895
NdeI	CATATG	1 cut(s)	1862
NdeII	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
NlaIII	CATG	6 cut(s)	403, 435, 469, 766, 1138, 1619
NlaIV	GGNNCC	3 cut(s)	462, 474, 1658
NmuCI	GTSAC	1 cut(s)	395
NsiI	ATGCAT	2 cut(s)	172, 896
PaeR7I	CTCGAG	1 cut(s)	910
PceI	AGGCCT	1 cut(s)	1177
PciSI	GCTCTTC	1 cut(s)	540
PcsI	WCGNNNNNNNCGW	2 cut(s)	211, 1848
PdmI	GAANNNNTTC	3 cut(s)	1871, 1908, 2013
PfeI	GAWTC	7 cut(s)	134, 200, 374, 559, 599, 611, 1280
PkrI	GCNGC	7 cut(s)	736, 748, 1395, 1405, 1408, 1686, 1791
PleI	GAGTC	2 cut(s)	436, 1684
PpsI	GAGTC	2 cut(s)	436, 1684
Psp124BI	GAGCTC	1 cut(s)	1902
Psp6I	CCWGG	2 cut(s)	1101, 1510
PspGI	CCWGG	2 cut(s)	1101, 1510
PspN4I	GGNNCC	3 cut(s)	462, 474, 1658
PspPI	GGNCC	4 cut(s)	710, 1017, 1294, 1657
PspXI	VCTCGAGB	1 cut(s)	910
PstI	CTGCAG	1 cut(s)	1398
PstNI	CAGNNNCTG	1 cut(s)	290
PsuI	RGATCY	3 cut(s)	521, 1669, 1771
RsaI	GTAC	2 cut(s)	126, 836
RsaNI	GTAC	2 cut(s)	125, 835
RseI	CAYNNNNRTG	1 cut(s)	889
SacI	GAGCTC	1 cut(s)	1902
SalI	GTCGAC	1 cut(s)	1778
SapI	GCTCTTC	1 cut(s)	540
SatI	GCNGC	7 cut(s)	735, 747, 1394, 1404, 1407, 1685, 1790
Sau3AI	GATC	8 cut(s)	120, 156, 521, 1024, 1530, 1669, 1771, 1920
Sau96I	GGNCC	4 cut(s)	710, 1017, 1294, 1657
SchI	GAGTC	2 cut(s)	437, 1685
ScrFI	CCNGG	4 cut(s)	1103, 1512, 1693, 1895
SduI	GDGCHC	3 cut(s)	19, 1902, 1963
SfaNI	GCATC	6 cut(s)	157, 458, 815, 1417, 1468, 1812
SfcI	CTRYAG	1 cut(s)	1394
Sfr274I	CTCGAG	1 cut(s)	910
SinI	GGWCC	2 cut(s)	710, 1657
SlaI	CTCGAG	1 cut(s)	910
SmiMI	CAYNNNNRTG	1 cut(s)	889
SmlI	CTYRAG	4 cut(s)	517, 910, 1139, 1964
SmoI	CTYRAG	4 cut(s)	517, 910, 1139, 1964
Sse9I	AATT	8 cut(s)	32, 77, 309, 660, 917, 1130, 1452, 1712
SseBI	AGGCCT	1 cut(s)	1177
SsiI	CCGC	3 cut(s)	952, 1463, 1685
SspI	AATATT	2 cut(s)	853, 1111
SspMI	CTAG	6 cut(s)	245, 264, 368, 1203, 1706, 1775
SstI	GAGCTC	1 cut(s)	1902
StuI	AGGCCT	1 cut(s)	1177
StyD4I	CCNGG	4 cut(s)	1101, 1510, 1691, 1893
TaaI	ACNGT	5 cut(s)	406, 988, 1244, 1644, 1768
TaiI	ACGT	1 cut(s)	217
TaqI	TCGA	7 cut(s)	911, 1341, 1779, 1830, 1842, 1902, 1923
TasI	AATT	8 cut(s)	32, 77, 309, 660, 917, 1130, 1452, 1712
TauI	GCSGC	1 cut(s)	1687
TfiI	GAWTC	7 cut(s)	134, 200, 374, 559, 599, 611, 1280
TscAI	CASTG	1 cut(s)	685
TseFI	GTSAC	1 cut(s)	395
TseI	GCWGC	6 cut(s)	734, 746, 1393, 1403, 1406, 1789
Tsp45I	GTSAC	1 cut(s)	395
TspRI	CASTG	1 cut(s)	685
Vha464I	CTTAAG	1 cut(s)	517
VpaK11BI	GGWCC	2 cut(s)	710, 1657
XagI	CCTNNNNNAGG	1 cut(s)	264
XapI	RAATTY	2 cut(s)	1130, 1712
XbaI	TCTAGA	1 cut(s)	263
XhoI	CTCGAG	1 cut(s)	910
XmiI	GTMKAC	2 cut(s)	565, 1779
XmnI	GAANNNNTTC	3 cut(s)	1871, 1908, 2013
XspI	CTAG	6 cut(s)	245, 264, 368, 1203, 1706, 1775
Zsp2I	ATGCAT	2 cut(s)	172, 896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.