Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0001680

Physical Location & Seq

Genomic Coordinates Reverse (-)

22109245 .. 22112154

Gene Structure 2910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGCGACAGACTCAGATCATGGAGCTTTCGTGGAGAAATTCCTTCTTCGACCGCCGTCTTCATTACCCGACCTTCCTCTGAGCGGTCTCACCTTTGCTGTCAAAGACATATTTGATGTGGCTGGACGTGTGACTGGGTTTGGGAATCCTGATTGGGCGAGGACTCACCCGGCTGCTGAATCAACAGCTCCGGTTGTATCGGCAATTTTGAGTGGAGGTGCCACAAGTATTGGCATAACTGTCATGGAGGAAATGGCATACAGTTTAAATGGAGAGAACAAGCATTATGGCACACCCAAAAATCCGTGCGCACCAGATAGGGTGCCTGGAGGCTCTTCTAGCGGTTCTGCTGTTGCCGTAGCTGCAGGCCTCGCAGATTTTTCCTTAGGAACCGACACTGGAGGAAGTGTAAGAGCTCCTGCTTCGTATTGTGGAATTTTTGGTTTTCGGCCATCTCATGGTGTCATTTCTACTTCTGGAGTTACTCCTCTGGCACAAAGTTTGGATACAGTGGGATGGTTTGCAAGGAATCCTGCGATTTTGAATAGAGTTGGGCGAGTGTTACTCCAATTGCCTGATATGGGTCCTGTCGTACCCACTCAGTTAATCATCGCAGAAGACTGTTTCCAGATTTCAAGTGTTCCAAGCAGTCGAGTGAAACAAGTACTTGTTGACTCAGTTGAGAAGTTATTTGGGGGTCATGTTATAAAACATGCTAACCTCGGGGACGTTGTCAAGGACAAAGTTCCAAGCTTGAACTCTTTCTTGGATAAAGGAAATCCAAGTGAAGAGTACATTATACCGTCATTGGCAGCCCTATCAACCGCCGATGGTCTACTTGAAAGGTATGAATTGAAGAGCAACCATGGTGAATGGGTTAGTACAGTCAGACCTGACTTAGGTCCCGGGATAGCAGAACGTGTATGGGCAGCTGTTCGGTCAACAGATGAAAATGTTGATGTTTGTCACTCCGTGATGACTGAATCGCGCGCTGCTCTTACTGACCTTCTCGGGGATTTCGGTGTCCTCGCAATGCCTACAGTTCCAGGGGATCCACCAAAACTGCAAACAGATCCTACTACACTGGACGGTGTTCATGCCAGGGCTTTCAGCTTCCTATCCATTGCCGTAGTTTCCGGATTCTGCCAGGTGAGTATACCACTAGGGATGTACGATAACCTGCCTGTTTCAGTTTCCTTGCTGGCAAAACATGGTTCGGATGGGTTCCTGCTCAATCTTGTGGAGACTCTTTACGACACTCTCAAAGAACACGTCGGGAAGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004040 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009987 GO:0010817 GO:0016053 GO:0016787 GO:0016810 GO:0016811 GO:0018130 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032787 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043864 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120

Pfam Domains

Protein Families

Amidase

Protein Analysis

429

Amino Acids

45.0

Weight (kDa)

5.19

Isoelectric Point (pI)

30.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	23 - 177	1.1e-50	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08980
fragaria_vesca	FvH4_6g05640 FvH4_6g05640 FvH4_6g05640 FvH4_6g05640
malus_domestica	MD00G1147100.v1.1 MD00G1147200.v1.1 MD00G1192400.v1.1 MD04G1207000.v1.1 MD12G1220800.v1.1 MD12G1220900.v1.1 MD12G1221100.v1.1
prunus_persica	Prupe.6G327700_v2.0.a1 Prupe.6G327700_v2.0.a1
pyrus_communis	pycom04g18300 pycom12g20660 pycom12g20670 pycom12g20680 pycom12g20700 pycom12g20710 pycom12g20760
rosa_chinensis	RchiOBHm_Chr3g0454411 RchiOBHm_Chr3g0454431 RchiOBHm_Chr3g0454461 RchiOBHm_Chr3g0454491
rosa_laevigata	RLG00000025440 RLG00000025441 RLG00000025442
rosa_multiflora	Rmu_sc0007209.1_g000005 Rmu_sc0026738.1_g000001
rosa_roxburghii	Rroxscaffold_6G00425030 Rroxscaffold_6G00425050
rosa_rugosa	Rorug02G0654600 Rorug02G0654700
rosa_samantha	Rh1BG006800 Rh3AG058700 Rh3AG059100 Rh3AG059200 Rh3BG060700 Rh3BG061100 Rh3BG061300 Rh3CG059500 Rh3CG059900 Rh3CG060100 Rh3DG060800 Rh3DG061000
rosa_wichuraiana	Rw3G004570 Rw3G004580 Rw3G004590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	707
Acc16I	TGCGCA	1 cut(s)	310
Acc36I	ACCTGC	1 cut(s)	1188
AccB1I	GGYRCC	2 cut(s)	218, 322
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccBSI	CCGCTC	1 cut(s)	84
AccI	GTMKAC	2 cut(s)	835, 1156
AccII	CGCG	2 cut(s)	988, 990
AccIII	TCCGGA	1 cut(s)	1136
AciI	CCGC	4 cut(s)	53, 84, 342, 825
AclWI	GGATC	3 cut(s)	1046, 1059, 1067
AcoI	YGGCCR	1 cut(s)	449
AcsI	RAATTY	2 cut(s)	38, 435
AdeI	CACNNNGTG	1 cut(s)	973
AfaI	GTAC	5 cut(s)	594, 666, 794, 883, 1172
AfiI	CCNNNNNNNGG	5 cut(s)	83, 458, 581, 899, 1012
AflIII	ACRYGT	3 cut(s)	127, 919, 1270
AgsI	TTSAA	5 cut(s)	544, 636, 757, 842, 856
AjiI	CACGTC	2 cut(s)	128, 1273
AjnI	CCWGG	4 cut(s)	325, 1045, 1100, 1146
AjuI	GAANNNNNNNTTGG	2 cut(s)	749, 781
AluBI	AGCT	7 cut(s)	26, 188, 362, 416, 753, 932, 1113
AluI	AGCT	7 cut(s)	26, 188, 362, 416, 753, 932, 1113
Alw21I	GWGCWC	1 cut(s)	418
Alw26I	GTCTC	2 cut(s)	92, 1238
AlwI	GGATC	3 cut(s)	1046, 1059, 1067
Ama87I	CYCGRG	3 cut(s)	722, 905, 1010
Aor13HI	TCCGGA	1 cut(s)	1136
AoxI	GGCC	2 cut(s)	367, 449
ApeKI	GCWGC	5 cut(s)	173, 362, 812, 929, 992
ApoI	RAATTY	2 cut(s)	38, 435
ArsI	GACNNNNNNTTYG	1 cut(s)	1257
Asp700I	GAANNNNTTC	1 cut(s)	761
AspLEI	GCGC	3 cut(s)	311, 990, 992
AspS9I	GGNCC	2 cut(s)	584, 902
AsuC2I	CCSGG	3 cut(s)	170, 906, 907
AsuHPI	GGTGA	4 cut(s)	82, 158, 881, 1162
AvaI	CYCGRG	3 cut(s)	722, 905, 1010
AvaII	GGWCC	2 cut(s)	584, 902
AxyI	CCTNAGG	1 cut(s)	385
BamHI	GGATCC	1 cut(s)	1051
BanI	GGYRCC	2 cut(s)	218, 322
BanII	GRGCYC	1 cut(s)	418
BbsI	GAAGAC	2 cut(s)	51, 624
Bbv12I	GWGCWC	1 cut(s)	418
BbvI	GCAGC	5 cut(s)	160, 349, 824, 941, 979
BccI	CCATC	4 cut(s)	460, 510, 824, 1214
BceAI	ACGGC	3 cut(s)	40, 341, 1112
BciT130I	CCWGG	4 cut(s)	327, 1047, 1102, 1148
BciVI	GTATCC	1 cut(s)	499
BcnI	CCSGG	3 cut(s)	170, 906, 907
BcoDI	GTCTC	2 cut(s)	92, 1238
BfaI	CTAG	2 cut(s)	339, 1163
BfmI	CTRYAG	2 cut(s)	363, 1038
BfuAI	ACCTGC	1 cut(s)	1188
BfuI	GTATCC	1 cut(s)	499
BisI	GCNGC	5 cut(s)	174, 363, 813, 930, 993
BlsI	GCNGC	5 cut(s)	175, 364, 814, 931, 994
BmcAI	AGTACT	1 cut(s)	666
Bme1390I	CCNGG	7 cut(s)	170, 327, 906, 907, 1047, 1102, 1148
Bme18I	GGWCC	2 cut(s)	584, 902
BmeT110I	CYCGRG	3 cut(s)	722, 905, 1010
BmgBI	CACGTC	2 cut(s)	128, 1273
BmgT120I	GGNCC	2 cut(s)	584, 902
BmiI	GGNNCC	7 cut(s)	220, 324, 391, 585, 904, 1053, 1226
BmrFI	CCNGG	7 cut(s)	170, 327, 906, 907, 1047, 1102, 1148
BmrI	ACTGGG	1 cut(s)	144
BmuI	ACTGGG	1 cut(s)	144
BoxI	GACNNNNGTC	2 cut(s)	55, 900
BpiI	GAAGAC	2 cut(s)	51, 624
BplI	GAGNNNNNCTC	2 cut(s)	549, 581
BpmI	CTGGAG	3 cut(s)	348, 420, 498
BpuMI	CCSGG	3 cut(s)	170, 906, 907
BsaI	GGTCTC	1 cut(s)	92
BsaJI	CCNNGG	5 cut(s)	721, 865, 905, 1046, 1101
BsaWI	WCCGGW	2 cut(s)	190, 1136
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 393, 423
Bsc4I	CCNNNNNNNGG	5 cut(s)	83, 458, 581, 899, 1012
Bse1I	ACTGG	3 cut(s)	139, 403, 1089
Bse21I	CCTNAGG	1 cut(s)	385
Bse3DI	GCAATG	2 cut(s)	1038, 1122
BseAI	TCCGGA	1 cut(s)	1136
BseBI	CCWGG	4 cut(s)	327, 1047, 1102, 1148
BseDI	CCNNGG	5 cut(s)	721, 865, 905, 1046, 1101
BseGI	GGATG	3 cut(s)	521, 1173, 1225
BseLI	CCNNNNNNNGG	5 cut(s)	83, 458, 581, 899, 1012
BseMI	GCAATG	2 cut(s)	1038, 1122
BseMII	CTCAG	4 cut(s)	27, 71, 614, 690
BseNI	ACTGG	3 cut(s)	139, 403, 1089
BsePI	GCGCGC	1 cut(s)	988
BseRI	GAGGAG	1 cut(s)	477
BseXI	GCAGC	5 cut(s)	160, 349, 824, 941, 979
Bsh1236I	CGCG	2 cut(s)	988, 990
Bsh1285I	CGRYCG	1 cut(s)	53
BshFI	GGCC	2 cut(s)	369, 451
BshNI	GGYRCC	2 cut(s)	218, 322
BsiEI	CGRYCG	1 cut(s)	53
BsiHKAI	GWGCWC	1 cut(s)	418
BsiHKCI	CYCGRG	3 cut(s)	722, 905, 1010
BsiSI	CCGG	4 cut(s)	170, 191, 906, 1137
BslFI	GGGAC	2 cut(s)	740, 888
BslI	CCNNNNNNNGG	5 cut(s)	83, 458, 581, 899, 1012
BsmAI	GTCTC	2 cut(s)	92, 1238
BsmFI	GGGAC	2 cut(s)	740, 888
BsnI	GGCC	2 cut(s)	369, 451
Bso31I	GGTCTC	1 cut(s)	92
BsoBI	CYCGRG	3 cut(s)	722, 905, 1010
Bsp1286I	GDGCHC	1 cut(s)	418
Bsp13I	TCCGGA	1 cut(s)	1136
Bsp143I	GATC	3 cut(s)	16, 1051, 1072
Bsp19I	CCATGG	1 cut(s)	865
BspACI	CCGC	4 cut(s)	53, 84, 342, 825
BspANI	GGCC	2 cut(s)	369, 451
BspCNI	CTCAG	4 cut(s)	26, 72, 613, 689
BspEI	TCCGGA	1 cut(s)	1136
BspFNI	CGCG	2 cut(s)	988, 990
BspLI	GGNNCC	7 cut(s)	220, 324, 391, 585, 904, 1053, 1226
BspMAI	CTGCAG	1 cut(s)	367
BspMI	ACCTGC	1 cut(s)	1188
BspPI	GGATC	3 cut(s)	1046, 1059, 1067
BspQI	GCTCTTC	2 cut(s)	340, 851
BspT107I	GGYRCC	2 cut(s)	218, 322
BspTNI	GGTCTC	1 cut(s)	92
BsrBI	CCGCTC	1 cut(s)	84
BsrDI	GCAATG	2 cut(s)	1038, 1122
BsrI	ACTGG	3 cut(s)	139, 403, 1089
BssECI	CCNNGG	5 cut(s)	721, 865, 905, 1046, 1101
BssHII	GCGCGC	1 cut(s)	988
BssMI	GATC	3 cut(s)	16, 1051, 1072
BssNAI	GTATAC	1 cut(s)	1157
BssT1I	CCWWGG	1 cut(s)	865
Bst1107I	GTATAC	1 cut(s)	1157
Bst2UI	CCWGG	4 cut(s)	327, 1047, 1102, 1148
Bst4CI	ACNGT	8 cut(s)	241, 263, 511, 623, 804, 886, 1042, 1091
Bst6I	CTCTTC	3 cut(s)	340, 783, 851
BstC8I	GCNNGC	3 cut(s)	367, 990, 1203
BstDEI	CTNAG	6 cut(s)	13, 80, 385, 600, 676, 898
BstDSI	CCRYGG	1 cut(s)	865
BstENI	CCTNNNNNAGG	1 cut(s)	897
BstF5I	GGATG	3 cut(s)	521, 1173, 1225
BstFNI	CGCG	2 cut(s)	988, 990
BstHHI	GCGC	3 cut(s)	311, 990, 992
BstKTI	GATC	3 cut(s)	19, 1054, 1075
BstMAI	GTCTC	2 cut(s)	92, 1238
BstMBI	GATC	3 cut(s)	16, 1051, 1072
BstMCI	CGRYCG	1 cut(s)	53
BstMWI	GCNNNNNNNGC	3 cut(s)	339, 362, 371
BstNI	CCWGG	4 cut(s)	327, 1047, 1102, 1148
BstNSI	RCATGY	1 cut(s)	716
BstPAI	GACNNNNGTC	2 cut(s)	55, 900
BstSCI	CCNGG	7 cut(s)	168, 325, 904, 905, 1045, 1100, 1146
BstSFI	CTRYAG	2 cut(s)	363, 1038
BstUI	CGCG	2 cut(s)	988, 990
BstV1I	GCAGC	5 cut(s)	160, 349, 824, 941, 979
BstV2I	GAAGAC	2 cut(s)	51, 624
BstX2I	RGATCY	2 cut(s)	1051, 1072
BstYI	RGATCY	2 cut(s)	1051, 1072
BstZ17I	GTATAC	1 cut(s)	1157
Bsu36I	CCTNAGG	1 cut(s)	385
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	2 cut(s)	369, 451
BtgI	CCRYGG	1 cut(s)	865
BtgZI	GCGATG	1 cut(s)	595
BtrI	CACGTC	2 cut(s)	128, 1273
BtsCI	GGATG	3 cut(s)	521, 1173, 1225
BtsIMutI	CAGTG	3 cut(s)	396, 516, 1082
BveI	ACCTGC	1 cut(s)	1188
Cac8I	GCNNGC	3 cut(s)	367, 990, 1203
CfoI	GCGC	3 cut(s)	311, 990, 992
Cfr13I	GGNCC	2 cut(s)	584, 902
Cfr9I	CCCGGG	1 cut(s)	905
Csp6I	GTAC	5 cut(s)	593, 665, 793, 882, 1171
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviAII	CATG	8 cut(s)	20, 244, 458, 701, 713, 866, 1097, 1211
CviQI	GTAC	5 cut(s)	593, 665, 793, 882, 1171
DdeI	CTNAG	6 cut(s)	13, 80, 385, 600, 676, 898
DpnI	GATC	3 cut(s)	18, 1053, 1074
DpnII	GATC	3 cut(s)	16, 1051, 1072
DraI	TTTAAA	1 cut(s)	267
DraIII	CACNNNGTG	1 cut(s)	973
EaeI	YGGCCR	1 cut(s)	449
Eam1104I	CTCTTC	3 cut(s)	340, 783, 851
EarI	CTCTTC	3 cut(s)	340, 783, 851
Ecl136II	GAGCTC	1 cut(s)	416
Eco130I	CCWWGG	1 cut(s)	865
Eco147I	AGGCCT	1 cut(s)	369
Eco24I	GRGCYC	1 cut(s)	418
Eco31I	GGTCTC	1 cut(s)	92
Eco47I	GGWCC	2 cut(s)	584, 902
Eco53kI	GAGCTC	1 cut(s)	416
Eco81I	CCTNAGG	1 cut(s)	385
Eco88I	CYCGRG	3 cut(s)	722, 905, 1010
EcoICRI	GAGCTC	1 cut(s)	416
EcoNI	CCTNNNNNAGG	1 cut(s)	897
EcoO109I	RGGNCCY	2 cut(s)	584, 902
EcoRII	CCWGG	4 cut(s)	325, 1045, 1100, 1146
EcoT14I	CCWWGG	1 cut(s)	865
EcoT38I	GRGCYC	1 cut(s)	418
ErhI	CCWWGG	1 cut(s)	865
FaeI	CATG	8 cut(s)	23, 247, 461, 704, 716, 869, 1100, 1214
FaqI	GGGAC	2 cut(s)	740, 888
FatI	CATG	8 cut(s)	19, 243, 457, 700, 712, 865, 1096, 1210
FblI	GTMKAC	2 cut(s)	835, 1156
Fnu4HI	GCNGC	5 cut(s)	174, 363, 813, 930, 993
FokI	GGATG	3 cut(s)	528, 1180, 1232
FriOI	GRGCYC	1 cut(s)	418
Fsp4HI	GCNGC	5 cut(s)	174, 363, 813, 930, 993
FspAI	RTGCGCAY	1 cut(s)	310
FspBI	CTAG	2 cut(s)	339, 1163
FspI	TGCGCA	1 cut(s)	310
GlaI	GCGC	3 cut(s)	310, 989, 991
GluI	GCNGC	5 cut(s)	174, 363, 813, 930, 993
GsuI	CTGGAG	3 cut(s)	348, 420, 498
HaeIII	GGCC	2 cut(s)	369, 451
HapII	CCGG	4 cut(s)	170, 191, 906, 1137
HhaI	GCGC	3 cut(s)	311, 990, 992
Hin1II	CATG	8 cut(s)	23, 247, 461, 704, 716, 869, 1100, 1214
Hin6I	GCGC	3 cut(s)	309, 988, 990
HinP1I	GCGC	3 cut(s)	309, 988, 990
HincII	GTYRAC	2 cut(s)	673, 942
HindII	GTYRAC	2 cut(s)	673, 942
HindIII	AAGCTT	1 cut(s)	751
HinfI	GANTC	9 cut(s)	11, 145, 163, 179, 529, 674, 983, 1140, 1246
HpaII	CCGG	4 cut(s)	170, 191, 906, 1137
HphI	GGTGA	4 cut(s)	82, 158, 881, 1162
Hpy166II	GTNNAC	4 cut(s)	673, 836, 942, 1157
Hpy188I	TCNGA	4 cut(s)	16, 81, 890, 1219
Hpy188III	TCNNGA	5 cut(s)	149, 477, 628, 1137, 1276
Hpy8I	GTNNAC	4 cut(s)	673, 836, 942, 1157
Hpy99I	CGWCG	1 cut(s)	1277
HpyAV	CCTTC	3 cut(s)	53, 83, 1016
HpyCH4III	ACNGT	8 cut(s)	241, 263, 511, 623, 804, 886, 1042, 1091
HpyCH4IV	ACGT	4 cut(s)	127, 729, 919, 1272
HpyCH4V	TGCA	3 cut(s)	365, 524, 1066
HpyF10VI	GCNNNNNNNGC	3 cut(s)	339, 362, 371
HpyF3I	CTNAG	6 cut(s)	13, 80, 385, 600, 676, 898
HpySE526I	ACGT	4 cut(s)	127, 729, 919, 1272
Hsp92II	CATG	8 cut(s)	23, 247, 461, 704, 716, 869, 1100, 1214
HspAI	GCGC	3 cut(s)	309, 988, 990
Kpn2I	TCCGGA	1 cut(s)	1136
Kzo9I	GATC	3 cut(s)	16, 1051, 1072
LguI	GCTCTTC	2 cut(s)	340, 851
LmnI	GCTCC	3 cut(s)	23, 193, 421
Lsp1109I	GCAGC	5 cut(s)	160, 349, 824, 941, 979
MaeI	CTAG	2 cut(s)	339, 1163
MaeII	ACGT	4 cut(s)	127, 729, 919, 1272
MaeIII	GTNAC	4 cut(s)	130, 481, 561, 965
MalI	GATC	3 cut(s)	18, 1053, 1074
MbiI	CCGCTC	1 cut(s)	84
MboI	GATC	3 cut(s)	16, 1051, 1072
MboII	GAAGA	6 cut(s)	38, 51, 327, 629, 800, 868
MfeI	CAATTG	1 cut(s)	569
MflI	RGATCY	2 cut(s)	1051, 1072
MhlI	GDGCHC	1 cut(s)	418
MluCI	AATT	5 cut(s)	38, 204, 435, 569, 851
MlyI	GAGTC	4 cut(s)	5, 157, 668, 1240
MroI	TCCGGA	1 cut(s)	1136
MroXI	GAANNNNTTC	1 cut(s)	761
MseI	TTAA	2 cut(s)	266, 605
MspA1I	CMGCKG	1 cut(s)	932
MspI	CCGG	4 cut(s)	170, 191, 906, 1137
MspR9I	CCNGG	7 cut(s)	170, 327, 906, 907, 1047, 1102, 1148
MunI	CAATTG	1 cut(s)	569
MvaI	CCWGG	4 cut(s)	327, 1047, 1102, 1148
MvnI	CGCG	2 cut(s)	988, 990
MwoI	GCNNNNNNNGC	3 cut(s)	339, 362, 371
NciI	CCSGG	3 cut(s)	170, 906, 907
NcoI	CCATGG	1 cut(s)	865
NdeII	GATC	3 cut(s)	16, 1051, 1072
NlaIII	CATG	8 cut(s)	23, 247, 461, 704, 716, 869, 1100, 1214
NlaIV	GGNNCC	7 cut(s)	220, 324, 391, 585, 904, 1053, 1226
NmuCI	GTSAC	2 cut(s)	130, 965
NsbI	TGCGCA	1 cut(s)	310
NspI	RCATGY	1 cut(s)	716
PauI	GCGCGC	1 cut(s)	988
PceI	AGGCCT	1 cut(s)	369
PciSI	GCTCTTC	2 cut(s)	340, 851
PdmI	GAANNNNTTC	1 cut(s)	761
PfeI	GAWTC	5 cut(s)	145, 179, 529, 983, 1140
PflFI	GACNNNGTC	1 cut(s)	731
PflMI	CCANNNNNTGG	1 cut(s)	458
PkrI	GCNGC	5 cut(s)	175, 364, 814, 931, 994
PleI	GAGTC	4 cut(s)	5, 157, 668, 1240
PpsI	GAGTC	4 cut(s)	5, 157, 668, 1240
PpuMI	RGGWCCY	2 cut(s)	584, 902
PshAI	GACNNNNGTC	2 cut(s)	55, 900
PsiI	TTATAA	1 cut(s)	707
Psp124BI	GAGCTC	1 cut(s)	418
Psp5II	RGGWCCY	2 cut(s)	584, 902
Psp6I	CCWGG	4 cut(s)	325, 1045, 1100, 1146
PspGI	CCWGG	4 cut(s)	325, 1045, 1100, 1146
PspN4I	GGNNCC	7 cut(s)	220, 324, 391, 585, 904, 1053, 1226
PspPI	GGNCC	2 cut(s)	584, 902
PspPPI	RGGWCCY	2 cut(s)	584, 902
PstI	CTGCAG	1 cut(s)	367
PsuI	RGATCY	2 cut(s)	1051, 1072
PsyI	GACNNNGTC	1 cut(s)	731
PteI	GCGCGC	1 cut(s)	988
PvuII	CAGCTG	1 cut(s)	932
RsaI	GTAC	5 cut(s)	594, 666, 794, 883, 1172
RsaNI	GTAC	5 cut(s)	593, 665, 793, 882, 1171
SacI	GAGCTC	1 cut(s)	418
SapI	GCTCTTC	2 cut(s)	340, 851
SaqAI	TTAA	2 cut(s)	266, 605
SatI	GCNGC	5 cut(s)	174, 363, 813, 930, 993
Sau3AI	GATC	3 cut(s)	16, 1051, 1072
Sau96I	GGNCC	2 cut(s)	584, 902
ScaI	AGTACT	1 cut(s)	666
SchI	GAGTC	4 cut(s)	5, 157, 668, 1240
ScrFI	CCNGG	7 cut(s)	170, 327, 906, 907, 1047, 1102, 1148
SduI	GDGCHC	1 cut(s)	418
SfcI	CTRYAG	2 cut(s)	363, 1038
SinI	GGWCC	2 cut(s)	584, 902
SmaI	CCCGGG	1 cut(s)	907
Sse9I	AATT	5 cut(s)	38, 204, 435, 569, 851
SseBI	AGGCCT	1 cut(s)	369
SsiI	CCGC	4 cut(s)	53, 84, 342, 825
SspMI	CTAG	2 cut(s)	339, 1163
SstI	GAGCTC	1 cut(s)	418
StuI	AGGCCT	1 cut(s)	369
StyD4I	CCNGG	7 cut(s)	168, 325, 904, 905, 1045, 1100, 1146
StyI	CCWWGG	1 cut(s)	865
TaaI	ACNGT	8 cut(s)	241, 263, 511, 623, 804, 886, 1042, 1091
TaiI	ACGT	4 cut(s)	130, 732, 922, 1275
TaqI	TCGA	2 cut(s)	49, 652
TaqII	GACCGA	1 cut(s)	927
TasI	AATT	5 cut(s)	38, 204, 435, 569, 851
TatI	WGTACW	3 cut(s)	664, 792, 881
TfiI	GAWTC	5 cut(s)	145, 179, 529, 983, 1140
Tru1I	TTAA	2 cut(s)	266, 605
Tru9I	TTAA	2 cut(s)	266, 605
TscAI	CASTG	3 cut(s)	403, 516, 1089
TseFI	GTSAC	2 cut(s)	130, 965
TseI	GCWGC	5 cut(s)	173, 362, 812, 929, 992
Tsp45I	GTSAC	2 cut(s)	130, 965
TspDTI	ATGAA	4 cut(s)	51, 864, 963, 1085
TspGWI	ACGGA	2 cut(s)	294, 961
TspMI	CCCGGG	1 cut(s)	905
TspRI	CASTG	3 cut(s)	403, 516, 1089
Tth111I	GACNNNGTC	1 cut(s)	731
Van91I	CCANNNNNTGG	1 cut(s)	458
VpaK11BI	GGWCC	2 cut(s)	584, 902
XagI	CCTNNNNNAGG	1 cut(s)	897
XapI	RAATTY	2 cut(s)	38, 435
XceI	RCATGY	1 cut(s)	716
XmaI	CCCGGG	1 cut(s)	905
XmiI	GTMKAC	2 cut(s)	835, 1156
XmnI	GAANNNNTTC	1 cut(s)	761
XspI	CTAG	2 cut(s)	339, 1163
ZrmI	AGTACT	1 cut(s)	666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.