Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0001680

Physical Location & Seq

Genomic Coordinates Forward (+)

4112110 .. 4115440

Gene Structure 3331 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG059500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGGAGGAACGCTCAGATTATGGAGCTTTCATAGAGAAATTCCTTCTGCAACCAAGCTCTTCATCTCATGATCTTCCCTTGAGTGGCCTCACCTTAGCTGTCAAAGACATATTTGATGTGGCTGGATATGTGACTGGATTTGGAAATCCTGATTGGGCAAGGACTCACCCAGCTGCCGAATCGACAGCTCCTTCTGTTTCGACAATCTTAAAAGGAGGTGCCACATGTATTGGTAAAACTGTCATGGATGAAATGGCATACTGTATAAATGGAGAGAACAAACATTATGGTACGCCGGTAAATCCATGTGCACCAGATAAGGTGCCTGGAGGATCTTCTAGTGGCTCTGCTGTTGTAGTAGGTGCAGACCTTGCAGATTTTTCCGTAGGGACTGACACTGGAGGAAGTGTAAGAGTTCCTGCTTCATATTGTGGAATTTTTGGGTTCCGACCTTCTCATGGTGTCATTTCTACTTCTGGAGTCATTCCTATGGCACAAAGTTTTGATACTGTGGGATGGTTTGCTAGGGATCCTGTGGTTTTAAGTAAAGTAGGACGGGCATTACTGCAAATTCCTGATGCGCATCCTGTCAGACCAGCTCAGTTGATCATTGCTGAAGACTGTTTCCAGCTTTCAAGCATTCCAAGTGATCGAGTAAAACAAGTACTTGTTCACTCAGTTGAGAAGTTATTTGGGGGTCATGTTTTAAAGCAAGCAAACCTTGGGGATGTCGTGAAGGACAAGGTTCTAAGTTTGAACTGTTTCTTCGATAAAGGAAAGGCAAGTCACAAGGATAACATACCATCCTTAGCAGCCCTATCAAGTGCCATGCGAACACTCCTAAGGCATGAATTCAAGAACAACCATGGTGAATGGGTCATTACAGTCAGACCTGATTTAGGTCCTGGGATATCAGAACGTGATGCTGGTGTCCTTGCAATTCCTACAGTTCCAGGGCCTCCGCCAAAACTACAAATGGATCCTACTACACTTGAAACATTTCGCGCCAGGGCTTTTAGCTTGTTGTCCATTGCCGGAGTATCTGGATTCTGCCAGGTGAACATACCACTAGGCATGTACGAAGATCTACCTGTGTCGGTTTCCTTACTGGCAAAGCACGGCTCGGATGGATTCCTGCTGAGTCCTGTAGAGACTCTCTATGCCACTCTCAAAGAACAAGTTGAAAGCTTGAAATCGCATCCTTGTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004040 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009987 GO:0010817 GO:0016053 GO:0016787 GO:0016810 GO:0016811 GO:0018130 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032787 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043864 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120

Pfam Domains

Protein Families

Amidase

Protein Analysis

403

Amino Acids

42.78

Weight (kDa)

6.05

Isoelectric Point (pI)

33.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	22 - 177	7.5e-52	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08980
fragaria_vesca	FvH4_6g05640 FvH4_6g05640 FvH4_6g05640 FvH4_6g05640
malus_domestica	MD00G1147100.v1.1 MD00G1147200.v1.1 MD00G1192400.v1.1 MD04G1207000.v1.1 MD12G1220800.v1.1 MD12G1220900.v1.1 MD12G1221100.v1.1
prunus_persica	Prupe.6G327700_v2.0.a1 Prupe.6G327700_v2.0.a1
pyrus_communis	pycom04g18300 pycom12g20660 pycom12g20670 pycom12g20680 pycom12g20700 pycom12g20710 pycom12g20760
rosa_chinensis	RchiOBHm_Chr3g0454411 RchiOBHm_Chr3g0454431 RchiOBHm_Chr3g0454461 RchiOBHm_Chr3g0454491
rosa_laevigata	RLG00000025440 RLG00000025441 RLG00000025442
rosa_multiflora	Rmu_sc0007209.1_g000005 Rmu_sc0026738.1_g000001
rosa_roxburghii	Rroxscaffold_6G00425030 Rroxscaffold_6G00425050
rosa_rugosa	Rorug02G0654600 Rorug02G0654700
rosa_samantha	Rh1BG006800 Rh3AG058700 Rh3AG059100 Rh3AG059200 Rh3BG060700 Rh3BG061100 Rh3BG061300 Rh3CG059500 Rh3CG059900 Rh3CG060100 Rh3DG060800 Rh3DG061000
rosa_wichuraiana	Rw3G004570 Rw3G004580 Rw3G004590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1210
Acc16I	TGCGCA	1 cut(s)	582
AccB1I	GGYRCC	2 cut(s)	218, 322
AccII	CGCG	1 cut(s)	1005
AciI	CCGC	1 cut(s)	962
AclWI	GGATC	5 cut(s)	340, 524, 537, 974, 987
AcsI	RAATTY	4 cut(s)	38, 435, 570, 851
AcuI	CTGAAG	1 cut(s)	636
AfaI	GTAC	3 cut(s)	292, 666, 1079
AfiI	CCNNNNNNNGG	3 cut(s)	83, 458, 899
AflIII	ACRYGT	1 cut(s)	224
AgsI	TTSAA	6 cut(s)	636, 757, 856, 995, 1184, 1192
AjnI	CCWGG	5 cut(s)	325, 904, 952, 1007, 1053
AjuI	GAANNNNNNNTTGG	2 cut(s)	136, 168
AluBI	AGCT	9 cut(s)	26, 57, 98, 173, 188, 599, 631, 1020, 1188
AluI	AGCT	9 cut(s)	26, 57, 98, 173, 188, 599, 631, 1020, 1188
Alw21I	GWGCWC	1 cut(s)	313
Alw26I	GTCTC	1 cut(s)	1145
Alw44I	GTGCAC	1 cut(s)	309
AlwI	GGATC	5 cut(s)	340, 524, 537, 974, 987
AoxI	GGCC	2 cut(s)	85, 956
ApaLI	GTGCAC	1 cut(s)	309
ApeKI	GCWGC	2 cut(s)	173, 812
ApoI	RAATTY	4 cut(s)	38, 435, 570, 851
Asp700I	GAANNNNTTC	2 cut(s)	761, 999
AspLEI	GCGC	2 cut(s)	583, 1007
AspS9I	GGNCC	2 cut(s)	902, 956
AsuHPI	GGTGA	4 cut(s)	82, 158, 881, 1069
AvaII	GGWCC	1 cut(s)	902
AxyI	CCTNAGG	1 cut(s)	842
BaeGI	GKGCMC	1 cut(s)	313
BaeI	ACNNNNGTAYC	2 cut(s)	282, 315
BamHI	GGATCC	2 cut(s)	529, 979
BanI	GGYRCC	2 cut(s)	218, 322
BbsI	GAAGAC	1 cut(s)	624
Bbv12I	GWGCWC	1 cut(s)	313
BbvI	GCAGC	2 cut(s)	160, 824
BccI	CCATC	3 cut(s)	510, 811, 1121
BceAI	ACGGC	1 cut(s)	1135
BciT130I	CCWGG	5 cut(s)	327, 906, 954, 1009, 1055
BclI	TGATCA	1 cut(s)	606
BcoDI	GTCTC	1 cut(s)	1145
BfaI	CTAG	3 cut(s)	339, 525, 1070
BfmI	CTRYAG	2 cut(s)	945, 1146
BglII	AGATCT	1 cut(s)	1084
BisI	GCNGC	2 cut(s)	174, 813
BlsI	GCNGC	2 cut(s)	175, 814
BmcAI	AGTACT	1 cut(s)	666
Bme1390I	CCNGG	5 cut(s)	327, 906, 954, 1009, 1055
Bme18I	GGWCC	1 cut(s)	902
BmgT120I	GGNCC	2 cut(s)	902, 956
BmiI	GGNNCC	5 cut(s)	220, 324, 446, 531, 981
BmrFI	CCNGG	5 cut(s)	327, 906, 954, 1009, 1055
BmsI	GCATC	4 cut(s)	568, 592, 913, 1207
BpiI	GAAGAC	1 cut(s)	624
BplI	GAGNNNNNCTC	1 cut(s)	28
BpmI	CTGGAG	3 cut(s)	348, 420, 498
Bpu10I	CCTNAGC	2 cut(s)	94, 808
BpuEI	CTTGAG	1 cut(s)	100
BsaBI	GATNNNNATC	1 cut(s)	582
BsaJI	CCNNGG	5 cut(s)	721, 865, 905, 953, 1008
BsaXI	ACNNNNNCTCC	2 cut(s)	393, 423
Bsc4I	CCNNNNNNNGG	3 cut(s)	83, 458, 899
Bse118I	RCCGGY	1 cut(s)	295
Bse1I	ACTGG	3 cut(s)	139, 403, 1113
Bse21I	CCTNAGG	1 cut(s)	842
Bse3DI	GCAATG	2 cut(s)	609, 1029
Bse8I	GATNNNNATC	1 cut(s)	582
BseBI	CCWGG	5 cut(s)	327, 906, 954, 1009, 1055
BseDI	CCNNGG	5 cut(s)	721, 865, 905, 953, 1008
BseGI	GGATG	7 cut(s)	253, 521, 583, 733, 803, 1132, 1198
BseJI	GATNNNNATC	1 cut(s)	582
BseLI	CCNNNNNNNGG	3 cut(s)	83, 458, 899
BseMI	GCAATG	2 cut(s)	609, 1029
BseMII	CTCAG	4 cut(s)	27, 614, 690, 1130
BseNI	ACTGG	3 cut(s)	139, 403, 1113
BseSI	GKGCMC	1 cut(s)	313
BseXI	GCAGC	2 cut(s)	160, 824
BseYI	CCCAGC	1 cut(s)	169
BsgI	GTGCAG	1 cut(s)	384
Bsh1236I	CGCG	1 cut(s)	1005
BshFI	GGCC	2 cut(s)	87, 958
BshNI	GGYRCC	2 cut(s)	218, 322
BsiHKAI	GWGCWC	1 cut(s)	313
BsiSI	CCGG	2 cut(s)	296, 1035
BslFI	GGGAC	1 cut(s)	403
BslI	CCNNNNNNNGG	3 cut(s)	83, 458, 899
BsmAI	GTCTC	1 cut(s)	1145
BsmFI	GGGAC	1 cut(s)	403
BsmI	GAATGC	1 cut(s)	639
BsnI	GGCC	2 cut(s)	87, 958
Bsp1286I	GDGCHC	1 cut(s)	313
Bsp143I	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
Bsp19I	CCATGG	1 cut(s)	865
BspACI	CCGC	1 cut(s)	962
BspANI	GGCC	2 cut(s)	87, 958
BspCNI	CTCAG	4 cut(s)	26, 613, 689, 1131
BspFNI	CGCG	1 cut(s)	1005
BspHI	TCATGA	1 cut(s)	67
BspLI	GGNNCC	5 cut(s)	220, 324, 446, 531, 981
BspPI	GGATC	5 cut(s)	340, 524, 537, 974, 987
BspQI	GCTCTTC	1 cut(s)	64
BspT107I	GGYRCC	2 cut(s)	218, 322
BsrDI	GCAATG	2 cut(s)	609, 1029
BsrFI	RCCGGY	1 cut(s)	295
BsrI	ACTGG	3 cut(s)	139, 403, 1113
BssAI	RCCGGY	1 cut(s)	295
BssECI	CCNNGG	5 cut(s)	721, 865, 905, 953, 1008
BssMI	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
BssT1I	CCWWGG	2 cut(s)	721, 865
Bst2UI	CCWGG	5 cut(s)	327, 906, 954, 1009, 1055
Bst4CI	ACNGT	7 cut(s)	241, 263, 511, 623, 761, 886, 949
Bst6I	CTCTTC	1 cut(s)	64
BstAPI	GCANNNNNTGC	1 cut(s)	371
BstC8I	GCNNGC	1 cut(s)	714
BstDEI	CTNAG	8 cut(s)	13, 94, 600, 676, 749, 808, 842, 1139
BstDSI	CCRYGG	1 cut(s)	865
BstENI	CCTNNNNNAGG	1 cut(s)	897
BstF5I	GGATG	7 cut(s)	253, 521, 583, 733, 803, 1132, 1198
BstFNI	CGCG	1 cut(s)	1005
BstHHI	GCGC	2 cut(s)	583, 1007
BstKTI	GATC	7 cut(s)	73, 335, 532, 609, 652, 982, 1087
BstMAI	GTCTC	1 cut(s)	1145
BstMBI	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
BstMWI	GCNNNNNNNGC	1 cut(s)	371
BstNI	CCWGG	5 cut(s)	327, 906, 954, 1009, 1055
BstNSI	RCATGY	2 cut(s)	228, 1078
BstSCI	CCNGG	5 cut(s)	325, 904, 952, 1007, 1053
BstSFI	CTRYAG	2 cut(s)	945, 1146
BstSLI	GKGCMC	1 cut(s)	313
BstUI	CGCG	1 cut(s)	1005
BstV1I	GCAGC	2 cut(s)	160, 824
BstV2I	GAAGAC	1 cut(s)	624
BstX2I	RGATCY	4 cut(s)	332, 529, 979, 1084
BstYI	RGATCY	4 cut(s)	332, 529, 979, 1084
Bsu36I	CCTNAGG	1 cut(s)	842
BsuRI	GGCC	2 cut(s)	87, 958
BtgI	CCRYGG	1 cut(s)	865
BtsCI	GGATG	7 cut(s)	253, 521, 583, 733, 803, 1132, 1198
BtsIMutI	CAGTG	1 cut(s)	396
Cac8I	GCNNGC	1 cut(s)	714
CciI	TCATGA	1 cut(s)	67
CfoI	GCGC	2 cut(s)	583, 1007
Cfr10I	RCCGGY	1 cut(s)	295
Cfr13I	GGNCC	2 cut(s)	902, 956
Csp6I	GTAC	3 cut(s)	291, 665, 1078
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviQI	GTAC	3 cut(s)	291, 665, 1078
DdeI	CTNAG	8 cut(s)	13, 94, 600, 676, 749, 808, 842, 1139
DpnI	GATC	7 cut(s)	72, 334, 531, 608, 651, 981, 1086
DpnII	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
DraI	TTTAAA	1 cut(s)	708
Eam1104I	CTCTTC	1 cut(s)	64
EarI	CTCTTC	1 cut(s)	64
EciI	GGCGGA	1 cut(s)	951
Eco130I	CCWWGG	2 cut(s)	721, 865
Eco32I	GATATC	1 cut(s)	912
Eco47I	GGWCC	1 cut(s)	902
Eco57I	CTGAAG	1 cut(s)	636
Eco81I	CCTNAGG	1 cut(s)	842
EcoNI	CCTNNNNNAGG	1 cut(s)	897
EcoO109I	RGGNCCY	2 cut(s)	902, 956
EcoRI	GAATTC	1 cut(s)	851
EcoRII	CCWGG	5 cut(s)	325, 904, 952, 1007, 1053
EcoRV	GATATC	1 cut(s)	912
EcoT14I	CCWWGG	2 cut(s)	721, 865
ErhI	CCWWGG	2 cut(s)	721, 865
FalI	AAGNNNNNCTT	2 cut(s)	705, 737
FaqI	GGGAC	1 cut(s)	403
FbaI	TGATCA	1 cut(s)	606
Fnu4HI	GCNGC	2 cut(s)	174, 813
FokI	GGATG	7 cut(s)	260, 528, 570, 740, 790, 1139, 1185
Fsp4HI	GCNGC	2 cut(s)	174, 813
FspAI	RTGCGCAY	1 cut(s)	582
FspBI	CTAG	3 cut(s)	339, 525, 1070
FspI	TGCGCA	1 cut(s)	582
GlaI	GCGC	2 cut(s)	582, 1006
GluI	GCNGC	2 cut(s)	174, 813
GsaI	CCCAGC	1 cut(s)	173
GsuI	CTGGAG	3 cut(s)	348, 420, 498
HaeIII	GGCC	2 cut(s)	87, 958
HapII	CCGG	2 cut(s)	296, 1035
HhaI	GCGC	2 cut(s)	583, 1007
Hin6I	GCGC	2 cut(s)	581, 1005
HinP1I	GCGC	2 cut(s)	581, 1005
HindIII	AAGCTT	1 cut(s)	1186
HinfI	GANTC	7 cut(s)	163, 179, 480, 1047, 1131, 1141, 1153
HpaII	CCGG	2 cut(s)	296, 1035
HphI	GGTGA	4 cut(s)	82, 158, 881, 1069
Hpy166II	GTNNAC	3 cut(s)	311, 673, 1060
Hpy188I	TCNGA	6 cut(s)	16, 449, 593, 890, 916, 1126
Hpy188III	TCNNGA	7 cut(s)	68, 149, 477, 575, 733, 856, 1044
Hpy8I	GTNNAC	3 cut(s)	311, 673, 1060
HpyAV	CCTTC	4 cut(s)	53, 201, 462, 730
HpyCH4III	ACNGT	7 cut(s)	241, 263, 511, 623, 761, 886, 949
HpyCH4IV	ACGT	1 cut(s)	919
HpyCH4V	TGCA	6 cut(s)	49, 311, 365, 374, 568, 938
HpyF10VI	GCNNNNNNNGC	1 cut(s)	371
HpyF3I	CTNAG	8 cut(s)	13, 94, 600, 676, 749, 808, 842, 1139
HpySE526I	ACGT	1 cut(s)	919
HspAI	GCGC	2 cut(s)	581, 1005
Ksp22I	TGATCA	1 cut(s)	606
Kzo9I	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
LguI	GCTCTTC	1 cut(s)	64
LmnI	GCTCC	2 cut(s)	23, 193
Lsp1109I	GCAGC	2 cut(s)	160, 824
LweI	GCATC	4 cut(s)	568, 592, 913, 1207
MaeI	CTAG	3 cut(s)	339, 525, 1070
MaeII	ACGT	1 cut(s)	919
MaeIII	GTNAC	2 cut(s)	130, 785
MalI	GATC	7 cut(s)	72, 334, 531, 608, 651, 981, 1086
MboI	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
MboII	GAAGA	6 cut(s)	51, 65, 327, 629, 757, 1094
MflI	RGATCY	4 cut(s)	332, 529, 979, 1084
MhlI	GDGCHC	1 cut(s)	313
MluCI	AATT	5 cut(s)	38, 435, 570, 851, 939
MlyI	GAGTC	4 cut(s)	157, 489, 1147, 1150
MmeI	TCCRAC	1 cut(s)	472
MnlI	CCTC	5 cut(s)	98, 209, 323, 395, 969
MroXI	GAANNNNTTC	2 cut(s)	761, 999
MseI	TTAA	3 cut(s)	209, 542, 707
MslI	CAYNNNNRTG	1 cut(s)	488
MspA1I	CMGCKG	1 cut(s)	173
MspI	CCGG	2 cut(s)	296, 1035
MspR9I	CCNGG	5 cut(s)	327, 906, 954, 1009, 1055
Mva1269I	GAATGC	1 cut(s)	639
MvaI	CCWGG	5 cut(s)	327, 906, 954, 1009, 1055
MvnI	CGCG	1 cut(s)	1005
MwoI	GCNNNNNNNGC	1 cut(s)	371
NcoI	CCATGG	1 cut(s)	865
NdeII	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
NlaIV	GGNNCC	5 cut(s)	220, 324, 446, 531, 981
NmuCI	GTSAC	2 cut(s)	130, 785
NsbI	TGCGCA	1 cut(s)	582
NspI	RCATGY	2 cut(s)	228, 1078
PagI	TCATGA	1 cut(s)	67
PciI	ACATGT	1 cut(s)	224
PciSI	GCTCTTC	1 cut(s)	64
PctI	GAATGC	1 cut(s)	639
PdmI	GAANNNNTTC	2 cut(s)	761, 999
PfeI	GAWTC	3 cut(s)	179, 1047, 1131
PkrI	GCNGC	2 cut(s)	175, 814
PleI	GAGTC	4 cut(s)	157, 488, 1147, 1149
PpsI	GAGTC	4 cut(s)	157, 488, 1147, 1149
PpuMI	RGGWCCY	1 cut(s)	902
PscI	ACATGT	1 cut(s)	224
PsiI	TTATAA	1 cut(s)	1210
Psp5II	RGGWCCY	1 cut(s)	902
Psp6I	CCWGG	5 cut(s)	325, 904, 952, 1007, 1053
PspFI	CCCAGC	1 cut(s)	169
PspGI	CCWGG	5 cut(s)	325, 904, 952, 1007, 1053
PspN4I	GGNNCC	5 cut(s)	220, 324, 446, 531, 981
PspPI	GGNCC	2 cut(s)	902, 956
PspPPI	RGGWCCY	1 cut(s)	902
PsuI	RGATCY	4 cut(s)	332, 529, 979, 1084
PvuII	CAGCTG	1 cut(s)	173
RsaI	GTAC	3 cut(s)	292, 666, 1079
RsaNI	GTAC	3 cut(s)	291, 665, 1078
RseI	CAYNNNNRTG	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	64
SaqAI	TTAA	3 cut(s)	209, 542, 707
SatI	GCNGC	2 cut(s)	174, 813
Sau3AI	GATC	7 cut(s)	70, 332, 529, 606, 649, 979, 1084
Sau96I	GGNCC	2 cut(s)	902, 956
ScaI	AGTACT	1 cut(s)	666
SchI	GAGTC	4 cut(s)	157, 489, 1147, 1150
ScrFI	CCNGG	5 cut(s)	327, 906, 954, 1009, 1055
SduI	GDGCHC	1 cut(s)	313
SfaNI	GCATC	4 cut(s)	568, 592, 913, 1207
SfcI	CTRYAG	2 cut(s)	945, 1146
SinI	GGWCC	1 cut(s)	902
SmiMI	CAYNNNNRTG	1 cut(s)	488
SmlI	CTYRAG	1 cut(s)	79
SmoI	CTYRAG	1 cut(s)	79
Sse9I	AATT	5 cut(s)	38, 435, 570, 851, 939
SsiI	CCGC	1 cut(s)	962
SspMI	CTAG	3 cut(s)	339, 525, 1070
StyD4I	CCNGG	5 cut(s)	325, 904, 952, 1007, 1053
StyI	CCWWGG	2 cut(s)	721, 865
TaaI	ACNGT	7 cut(s)	241, 263, 511, 623, 761, 886, 949
TaiI	ACGT	1 cut(s)	922
TaqI	TCGA	4 cut(s)	182, 200, 652, 768
TasI	AATT	5 cut(s)	38, 435, 570, 851, 939
TatI	WGTACW	1 cut(s)	664
TfiI	GAWTC	3 cut(s)	179, 1047, 1131
Tru1I	TTAA	3 cut(s)	209, 542, 707
Tru9I	TTAA	3 cut(s)	209, 542, 707
TscAI	CASTG	1 cut(s)	403
TseFI	GTSAC	2 cut(s)	130, 785
TseI	GCWGC	2 cut(s)	173, 812
Tsp45I	GTSAC	2 cut(s)	130, 785
TspDTI	ATGAA	5 cut(s)	19, 51, 264, 414, 864
TspGWI	ACGGA	1 cut(s)	373
TspRI	CASTG	1 cut(s)	403
VneI	GTGCAC	1 cut(s)	309
VpaK11BI	GGWCC	1 cut(s)	902
XagI	CCTNNNNNAGG	1 cut(s)	897
XapI	RAATTY	4 cut(s)	38, 435, 570, 851
XceI	RCATGY	2 cut(s)	228, 1078
XmnI	GAANNNNTTC	2 cut(s)	761, 999
XspI	CTAG	3 cut(s)	339, 525, 1070
ZrmI	AGTACT	1 cut(s)	666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.