Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007209.1

Orthogroup ID

OG0001680

Physical Location & Seq

Genomic Coordinates Reverse (-)

24772 .. 29645

Gene Structure 4874 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007209.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

atgatcaatgcgtattatggagctttcacagagaaattccttctgcgaccaagctcttcatctcatgatcttcccttgagtggcctcaccttcgctgtcaaagacatatttgatgtggctggatatgtgactggatttggaaatcctgattgggcaaggactcacccagctgccgaatcgacagctccttctgtttcgacaatcttaaaaggaggcgccacatgtattggtaaaactgtcatggatgaaatggcatacagggtgcctggaggatcttctagtggttctgctgttgtggtgggtgcagaccttgcagatttttccttaggaactgatactggaggaagtgtaagagttcctgcttcatattgtggaatttttgggttccgaccttctcatggtgtcatttctacttctggagtcattcctatggcgcaaagttttgatactgtgggatggtttgctagggatcctgtggttttgagtaaagtaggacgggcattactgcaaattcctgatgtgcatcctgtcagaccagctcagttgatcattgctgaagactgtttccagctttcaagcattccaagtgatcgagtaaagcaagtacttgttcactcagttgagaagttatttgggggtcatgttttaaagcaagcaaaccttggggatgtcgtgaaggacaaggttccaagtttgaactgtttcttcgataaaggaaatgcacgtcaagaggataacataccatccttagcagccctatcaagtgccatgcgaacactccaaagatttactgaaattcaatgtatctgtggttatcattgggaggataggcatgaattcaagaacaaccatggtgaatgggtcattacagtcagacctgatttaggtcctgggatatcagaacgtgtatgggaagccgtcagggcagcagatgaaaatattggtgtttgtcactccgtgaagtccgaactatgtgctgctcttactgaacttcttggggatgctggtgtccttgcaattcctacagttccagggcctccgccaaaactacaaatggatcctgctacacttgaaacatttcgcgccagggcttttagcttgatgtccattgccggagtatctggattctgccaggtgaacataccactaggcatgtgtgaagatctacctgtgtcggtttccttgctggcaaagcacggctcagatggattcctgctgaataataatggtttacttagactggagctcaacgatattggattagagtttttgtggccagttggtaggattaaggaagcactatccggaatagatgtttccaacccatcaacacctacctcttgtccagcggaagcgatcaaatcacttgctattgaagaactaaatattccagaggcaaaaatcggaattgctgctagagtcttggtttttctttggctatattcatctatccaagagcatgggactctggtttgcttctacagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004040 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006082 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009987 GO:0010817 GO:0016053 GO:0016787 GO:0016810 GO:0016811 GO:0018130 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032787 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043864 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120

Pfam Domains

Protein Families

Amidase

Protein Analysis

495

Amino Acids

53.02

Weight (kDa)

5.49

Isoelectric Point (pI)

35.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08980
fragaria_vesca	FvH4_6g05640 FvH4_6g05640 FvH4_6g05640 FvH4_6g05640
malus_domestica	MD00G1147100.v1.1 MD00G1147200.v1.1 MD00G1192400.v1.1 MD04G1207000.v1.1 MD12G1220800.v1.1 MD12G1220900.v1.1 MD12G1221100.v1.1
prunus_persica	Prupe.6G327700_v2.0.a1 Prupe.6G327700_v2.0.a1
pyrus_communis	pycom04g18300 pycom12g20660 pycom12g20670 pycom12g20680 pycom12g20700 pycom12g20710 pycom12g20760
rosa_chinensis	RchiOBHm_Chr3g0454411 RchiOBHm_Chr3g0454431 RchiOBHm_Chr3g0454461 RchiOBHm_Chr3g0454491
rosa_laevigata	RLG00000025440 RLG00000025441 RLG00000025442
rosa_multiflora	Rmu_sc0007209.1_g000005 Rmu_sc0026738.1_g000001
rosa_roxburghii	Rroxscaffold_6G00425030 Rroxscaffold_6G00425050
rosa_rugosa	Rorug02G0654600 Rorug02G0654700
rosa_samantha	Rh1BG006800 Rh3AG058700 Rh3AG059100 Rh3AG059200 Rh3BG060700 Rh3BG061100 Rh3BG061300 Rh3CG059500 Rh3CG059900 Rh3CG060100 Rh3DG060800 Rh3DG061000
rosa_wichuraiana	Rw3G004570 Rw3G004580 Rw3G004590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	215, 262
AccII	CGCG	1 cut(s)	1083
AccIII	TCCGGA	1 cut(s)	1304
AciI	CCGC	2 cut(s)	1040, 1349
AclWI	GGATC	5 cut(s)	280, 464, 477, 1052, 1065
AcoI	YGGCCR	1 cut(s)	1274
AcsI	RAATTY	5 cut(s)	35, 375, 510, 795, 836
AcuI	CTGAAG	1 cut(s)	576
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	1 cut(s)	958
AfaI	GTAC	1 cut(s)	606
AfiI	CCNNNNNNNGG	3 cut(s)	80, 398, 884
AflIII	ACRYGT	2 cut(s)	221, 904
AgsI	TTSAA	6 cut(s)	576, 697, 800, 841, 1073, 1376
AjiI	CACGTC	1 cut(s)	725
AjnI	CCWGG	5 cut(s)	265, 889, 1030, 1085, 1131
AjuI	GAANNNNNNNTTGG	2 cut(s)	133, 165
AluBI	AGCT	9 cut(s)	23, 54, 170, 185, 539, 571, 1098, 1246, 1485
AluI	AGCT	9 cut(s)	23, 54, 170, 185, 539, 571, 1098, 1246, 1485
Alw21I	GWGCWC	1 cut(s)	1248
AlwI	GGATC	5 cut(s)	280, 464, 477, 1052, 1065
Aor13HI	TCCGGA	1 cut(s)	1304
AoxI	GGCC	3 cut(s)	82, 1034, 1274
ApeKI	GCWGC	5 cut(s)	170, 752, 926, 977, 1412
ApoI	RAATTY	5 cut(s)	35, 375, 510, 795, 836
Asp700I	GAANNNNTTC	2 cut(s)	701, 1077
AspLEI	GCGC	3 cut(s)	218, 436, 1085
AspS9I	GGNCC	2 cut(s)	887, 1034
AsuHPI	GGTGA	4 cut(s)	79, 155, 866, 1147
AvaII	GGWCC	1 cut(s)	887
AxyI	CCTNAGG	1 cut(s)	325
BalI	TGGCCA	1 cut(s)	1276
BamHI	GGATCC	2 cut(s)	469, 1057
BanI	GGYRCC	2 cut(s)	215, 262
BanII	GRGCYC	1 cut(s)	1248
BbsI	GAAGAC	1 cut(s)	564
Bbv12I	GWGCWC	1 cut(s)	1248
BbvI	GCAGC	5 cut(s)	157, 764, 938, 964, 1399
BccI	CCATC	4 cut(s)	450, 751, 1199, 1333
BceAI	ACGGC	2 cut(s)	902, 1213
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BciT130I	CCWGG	5 cut(s)	267, 891, 1032, 1087, 1133
BclI	TGATCA	2 cut(s)	3, 546
BfaI	CTAG	4 cut(s)	279, 465, 1148, 1416
BfmI	CTRYAG	2 cut(s)	1023, 1480
BfoI	RGCGCY	1 cut(s)	219
BglI	GCCNNNNNGGC	1 cut(s)	923
BglII	AGATCT	1 cut(s)	1162
BisI	GCNGC	5 cut(s)	171, 753, 927, 978, 1413
BlsI	GCNGC	5 cut(s)	172, 754, 928, 979, 1414
BmcAI	AGTACT	1 cut(s)	606
Bme1390I	CCNGG	5 cut(s)	267, 891, 1032, 1087, 1133
Bme18I	GGWCC	1 cut(s)	887
BmgBI	CACGTC	1 cut(s)	725
BmgT120I	GGNCC	2 cut(s)	887, 1034
BmiI	GGNNCC	6 cut(s)	217, 264, 386, 471, 687, 1059
BmrFI	CCNGG	5 cut(s)	267, 891, 1032, 1087, 1133
BmsI	GCATC	2 cut(s)	532, 991
BpiI	GAAGAC	1 cut(s)	564
BpmI	CTGGAG	4 cut(s)	288, 360, 438, 1262
Bpu10I	CCTNAGC	1 cut(s)	748
BpuEI	CTTGAG	1 cut(s)	97
BsaBI	GATNNNNATC	1 cut(s)	522
BsaHI	GRCGYC	1 cut(s)	216
BsaJI	CCNNGG	5 cut(s)	661, 850, 890, 1031, 1086
BsaWI	WCCGGW	1 cut(s)	1304
BsaXI	ACNNNNNCTCC	2 cut(s)	333, 363
Bsc4I	CCNNNNNNNGG	3 cut(s)	80, 398, 884
Bse1I	ACTGG	4 cut(s)	136, 343, 1245, 1277
Bse21I	CCTNAGG	1 cut(s)	325
Bse3DI	GCAATG	2 cut(s)	549, 1107
Bse8I	GATNNNNATC	1 cut(s)	522
BseAI	TCCGGA	1 cut(s)	1304
BseBI	CCWGG	5 cut(s)	267, 891, 1032, 1087, 1133
BseDI	CCNNGG	5 cut(s)	661, 850, 890, 1031, 1086
BseGI	GGATG	6 cut(s)	250, 461, 523, 673, 743, 1006
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	3 cut(s)	80, 398, 884
BseMI	GCAATG	2 cut(s)	549, 1107
BseMII	CTCAG	3 cut(s)	554, 630, 1215
BseNI	ACTGG	4 cut(s)	136, 343, 1245, 1277
BseXI	GCAGC	5 cut(s)	157, 764, 938, 964, 1399
BseYI	CCCAGC	1 cut(s)	166
BsgI	GTGCAG	1 cut(s)	324
Bsh1236I	CGCG	1 cut(s)	1083
BshFI	GGCC	3 cut(s)	84, 1036, 1276
BshNI	GGYRCC	2 cut(s)	215, 262
BsiHKAI	GWGCWC	1 cut(s)	1248
BsiSI	CCGG	2 cut(s)	1113, 1305
BslFI	GGGAC	1 cut(s)	1477
BslI	CCNNNNNNNGG	3 cut(s)	80, 398, 884
BsmFI	GGGAC	1 cut(s)	1477
BsmI	GAATGC	1 cut(s)	579
BsnI	GGCC	3 cut(s)	84, 1036, 1276
Bsp1286I	GDGCHC	1 cut(s)	1248
Bsp13I	TCCGGA	1 cut(s)	1304
Bsp143I	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
Bsp19I	CCATGG	1 cut(s)	850
BspACI	CCGC	2 cut(s)	1040, 1349
BspANI	GGCC	3 cut(s)	84, 1036, 1276
BspCNI	CTCAG	3 cut(s)	553, 629, 1214
BspEI	TCCGGA	1 cut(s)	1304
BspFNI	CGCG	1 cut(s)	1083
BspHI	TCATGA	1 cut(s)	64
BspLI	GGNNCC	6 cut(s)	217, 264, 386, 471, 687, 1059
BspPI	GGATC	5 cut(s)	280, 464, 477, 1052, 1065
BspQI	GCTCTTC	1 cut(s)	61
BspT107I	GGYRCC	2 cut(s)	215, 262
BsrDI	GCAATG	2 cut(s)	549, 1107
BsrI	ACTGG	4 cut(s)	136, 343, 1245, 1277
BssECI	CCNNGG	5 cut(s)	661, 850, 890, 1031, 1086
BssMI	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
BssNI	GRCGYC	1 cut(s)	216
BssT1I	CCWWGG	2 cut(s)	661, 850
Bst2UI	CCWGG	5 cut(s)	267, 891, 1032, 1087, 1133
Bst4CI	ACNGT	6 cut(s)	238, 451, 563, 701, 871, 1027
Bst6I	CTCTTC	1 cut(s)	61
BstACI	GRCGYC	1 cut(s)	216
BstAPI	GCANNNNNTGC	1 cut(s)	311
BstC8I	GCNNGC	2 cut(s)	654, 1188
BstDEI	CTNAG	6 cut(s)	325, 540, 616, 748, 1201, 1235
BstDSI	CCRYGG	1 cut(s)	850
BstENI	CCTNNNNNAGG	1 cut(s)	882
BstF5I	GGATG	6 cut(s)	250, 461, 523, 673, 743, 1006
BstFNI	CGCG	1 cut(s)	1083
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	3 cut(s)	218, 436, 1085
BstKTI	GATC	9 cut(s)	6, 70, 275, 472, 549, 592, 1060, 1165, 1359
BstMBI	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 923, 1192, 1482
BstNI	CCWGG	5 cut(s)	267, 891, 1032, 1087, 1133
BstNSI	RCATGY	2 cut(s)	225, 1156
BstSCI	CCNGG	5 cut(s)	265, 889, 1030, 1085, 1131
BstSFI	CTRYAG	2 cut(s)	1023, 1480
BstUI	CGCG	1 cut(s)	1083
BstV1I	GCAGC	5 cut(s)	157, 764, 938, 964, 1399
BstV2I	GAAGAC	1 cut(s)	564
BstX2I	RGATCY	4 cut(s)	272, 469, 1057, 1162
BstXI	CCANNNNNNTGG	1 cut(s)	1460
BstYI	RGATCY	4 cut(s)	272, 469, 1057, 1162
Bsu36I	CCTNAGG	1 cut(s)	325
BsuRI	GGCC	3 cut(s)	84, 1036, 1276
BtgI	CCRYGG	1 cut(s)	850
BtrI	CACGTC	1 cut(s)	725
BtsCI	GGATG	6 cut(s)	250, 461, 523, 673, 743, 1006
Cac8I	GCNNGC	2 cut(s)	654, 1188
CciI	TCATGA	1 cut(s)	64
CfoI	GCGC	3 cut(s)	218, 436, 1085
Cfr13I	GGNCC	2 cut(s)	887, 1034
Csp6I	GTAC	1 cut(s)	605
CspCI	CAANNNNNGTGG	2 cut(s)	208, 243
CviQI	GTAC	1 cut(s)	605
DdeI	CTNAG	6 cut(s)	325, 540, 616, 748, 1201, 1235
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	9 cut(s)	5, 69, 274, 471, 548, 591, 1059, 1164, 1358
DpnII	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
DraI	TTTAAA	1 cut(s)	648
DraIII	CACNNNGTG	1 cut(s)	958
EaeI	YGGCCR	1 cut(s)	1274
Eam1104I	CTCTTC	1 cut(s)	61
EarI	CTCTTC	1 cut(s)	61
EciI	GGCGGA	1 cut(s)	1029
Ecl136II	GAGCTC	1 cut(s)	1246
Eco130I	CCWWGG	2 cut(s)	661, 850
Eco24I	GRGCYC	1 cut(s)	1248
Eco32I	GATATC	1 cut(s)	897
Eco47I	GGWCC	1 cut(s)	887
Eco53kI	GAGCTC	1 cut(s)	1246
Eco57I	CTGAAG	1 cut(s)	576
Eco81I	CCTNAGG	1 cut(s)	325
EcoICRI	GAGCTC	1 cut(s)	1246
EcoNI	CCTNNNNNAGG	1 cut(s)	882
EcoO109I	RGGNCCY	2 cut(s)	887, 1034
EcoRI	GAATTC	1 cut(s)	836
EcoRII	CCWGG	5 cut(s)	265, 889, 1030, 1085, 1131
EcoRV	GATATC	1 cut(s)	897
EcoT14I	CCWWGG	2 cut(s)	661, 850
EcoT38I	GRGCYC	1 cut(s)	1248
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	2 cut(s)	661, 850
FalI	AAGNNNNNCTT	2 cut(s)	645, 677
FaqI	GGGAC	1 cut(s)	1477
FbaI	TGATCA	2 cut(s)	3, 546
Fnu4HI	GCNGC	5 cut(s)	171, 753, 927, 978, 1413
FokI	GGATG	6 cut(s)	257, 468, 510, 680, 730, 1013
FriOI	GRGCYC	1 cut(s)	1248
Fsp4HI	GCNGC	5 cut(s)	171, 753, 927, 978, 1413
FspBI	CTAG	4 cut(s)	279, 465, 1148, 1416
GlaI	GCGC	3 cut(s)	217, 435, 1084
GluI	GCNGC	5 cut(s)	171, 753, 927, 978, 1413
GsaI	CCCAGC	1 cut(s)	170
GsuI	CTGGAG	4 cut(s)	288, 360, 438, 1262
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	3 cut(s)	84, 1036, 1276
HapII	CCGG	2 cut(s)	1113, 1305
HhaI	GCGC	3 cut(s)	218, 436, 1085
Hin1I	GRCGYC	1 cut(s)	216
Hin6I	GCGC	3 cut(s)	216, 434, 1083
HinP1I	GCGC	3 cut(s)	216, 434, 1083
HinfI	GANTC	7 cut(s)	160, 176, 420, 1125, 1209, 1419, 1465
HpaII	CCGG	2 cut(s)	1113, 1305
HphI	GGTGA	4 cut(s)	79, 155, 866, 1147
Hpy166II	GTNNAC	3 cut(s)	613, 1138, 1232
Hpy188I	TCNGA	7 cut(s)	389, 533, 875, 901, 967, 1204, 1406
Hpy8I	GTNNAC	3 cut(s)	613, 1138, 1232
HpyAV	CCTTC	5 cut(s)	50, 100, 198, 402, 670
HpyCH4III	ACNGT	6 cut(s)	238, 451, 563, 701, 871, 1027
HpyCH4IV	ACGT	2 cut(s)	724, 904
HpyCH4V	TGCA	6 cut(s)	305, 314, 508, 523, 722, 1016
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 923, 1192, 1482
HpyF3I	CTNAG	6 cut(s)	325, 540, 616, 748, 1201, 1235
HpySE526I	ACGT	2 cut(s)	724, 904
Hsp92I	GRCGYC	1 cut(s)	216
HspAI	GCGC	3 cut(s)	216, 434, 1083
KasI	GGCGCC	1 cut(s)	215
Kpn2I	TCCGGA	1 cut(s)	1304
Ksp22I	TGATCA	2 cut(s)	3, 546
Kzo9I	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
LguI	GCTCTTC	1 cut(s)	61
LmnI	GCTCC	3 cut(s)	20, 190, 1243
Lsp1109I	GCAGC	5 cut(s)	157, 764, 938, 964, 1399
LweI	GCATC	2 cut(s)	532, 991
MaeI	CTAG	4 cut(s)	279, 465, 1148, 1416
MaeII	ACGT	2 cut(s)	724, 904
MaeIII	GTNAC	2 cut(s)	127, 950
MalI	GATC	9 cut(s)	5, 69, 274, 471, 548, 591, 1059, 1164, 1358
MboI	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
MboII	GAAGA	7 cut(s)	48, 62, 267, 569, 697, 1172, 1388
MflI	RGATCY	4 cut(s)	272, 469, 1057, 1162
MhlI	GDGCHC	1 cut(s)	1248
MlsI	TGGCCA	1 cut(s)	1276
MluCI	AATT	7 cut(s)	35, 375, 510, 795, 836, 1017, 1407
MluNI	TGGCCA	1 cut(s)	1276
Mly113I	GGCGCC	1 cut(s)	216
MlyI	GAGTC	4 cut(s)	154, 429, 1428, 1459
MmeI	TCCRAC	2 cut(s)	412, 1344
MnlI	CCTC	9 cut(s)	95, 206, 263, 335, 724, 817, 1047, 1348, 1387
Mox20I	TGGCCA	1 cut(s)	1276
MroI	TCCGGA	1 cut(s)	1304
MroXI	GAANNNNTTC	2 cut(s)	701, 1077
MscI	TGGCCA	1 cut(s)	1276
MseI	TTAA	3 cut(s)	206, 647, 1290
MslI	CAYNNNNRTG	1 cut(s)	428
Msp20I	TGGCCA	1 cut(s)	1276
MspA1I	CMGCKG	3 cut(s)	170, 1349, 1485
MspI	CCGG	2 cut(s)	1113, 1305
MspR9I	CCNGG	5 cut(s)	267, 891, 1032, 1087, 1133
Mva1269I	GAATGC	1 cut(s)	579
MvaI	CCWGG	5 cut(s)	267, 891, 1032, 1087, 1133
MvnI	CGCG	1 cut(s)	1083
MwoI	GCNNNNNNNGC	4 cut(s)	311, 923, 1192, 1482
NarI	GGCGCC	1 cut(s)	216
NcoI	CCATGG	1 cut(s)	850
NdeII	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
NlaIV	GGNNCC	6 cut(s)	217, 264, 386, 471, 687, 1059
NmuCI	GTSAC	2 cut(s)	127, 950
NspI	RCATGY	2 cut(s)	225, 1156
PagI	TCATGA	1 cut(s)	64
PciI	ACATGT	1 cut(s)	221
PciSI	GCTCTTC	1 cut(s)	61
PctI	GAATGC	1 cut(s)	579
PdmI	GAANNNNTTC	2 cut(s)	701, 1077
PfeI	GAWTC	3 cut(s)	176, 1125, 1209
PkrI	GCNGC	5 cut(s)	172, 754, 928, 979, 1414
PleI	GAGTC	4 cut(s)	154, 428, 1427, 1459
PluTI	GGCGCC	1 cut(s)	219
PpsI	GAGTC	4 cut(s)	154, 428, 1427, 1459
PpuMI	RGGWCCY	1 cut(s)	887
PscI	ACATGT	1 cut(s)	221
Psp124BI	GAGCTC	1 cut(s)	1248
Psp5II	RGGWCCY	1 cut(s)	887
Psp6I	CCWGG	5 cut(s)	265, 889, 1030, 1085, 1131
PspFI	CCCAGC	1 cut(s)	166
PspGI	CCWGG	5 cut(s)	265, 889, 1030, 1085, 1131
PspN4I	GGNNCC	6 cut(s)	217, 264, 386, 471, 687, 1059
PspPI	GGNCC	2 cut(s)	887, 1034
PspPPI	RGGWCCY	1 cut(s)	887
PsuI	RGATCY	4 cut(s)	272, 469, 1057, 1162
PvuII	CAGCTG	2 cut(s)	170, 1485
RsaI	GTAC	1 cut(s)	606
RsaNI	GTAC	1 cut(s)	605
RseI	CAYNNNNRTG	1 cut(s)	428
SacI	GAGCTC	1 cut(s)	1248
SapI	GCTCTTC	1 cut(s)	61
SaqAI	TTAA	3 cut(s)	206, 647, 1290
SatI	GCNGC	5 cut(s)	171, 753, 927, 978, 1413
Sau3AI	GATC	9 cut(s)	3, 67, 272, 469, 546, 589, 1057, 1162, 1356
Sau96I	GGNCC	2 cut(s)	887, 1034
ScaI	AGTACT	1 cut(s)	606
SchI	GAGTC	4 cut(s)	154, 429, 1428, 1459
ScrFI	CCNGG	5 cut(s)	267, 891, 1032, 1087, 1133
SduI	GDGCHC	1 cut(s)	1248
SfaNI	GCATC	2 cut(s)	532, 991
SfcI	CTRYAG	2 cut(s)	1023, 1480
SfoI	GGCGCC	1 cut(s)	217
SinI	GGWCC	1 cut(s)	887
SmiMI	CAYNNNNRTG	1 cut(s)	428
SmlI	CTYRAG	1 cut(s)	76
SmoI	CTYRAG	1 cut(s)	76
Sse9I	AATT	7 cut(s)	35, 375, 510, 795, 836, 1017, 1407
SsiI	CCGC	2 cut(s)	1040, 1349
SspDI	GGCGCC	1 cut(s)	215
SspI	AATATT	2 cut(s)	940, 1387
SspMI	CTAG	4 cut(s)	279, 465, 1148, 1416
SstI	GAGCTC	1 cut(s)	1248
StyD4I	CCNGG	5 cut(s)	265, 889, 1030, 1085, 1131
StyI	CCWWGG	2 cut(s)	661, 850
TaaI	ACNGT	6 cut(s)	238, 451, 563, 701, 871, 1027
TaiI	ACGT	2 cut(s)	727, 907
TaqI	TCGA	4 cut(s)	179, 197, 592, 708
TasI	AATT	7 cut(s)	35, 375, 510, 795, 836, 1017, 1407
TatI	WGTACW	1 cut(s)	604
TfiI	GAWTC	3 cut(s)	176, 1125, 1209
Tru1I	TTAA	3 cut(s)	206, 647, 1290
Tru9I	TTAA	3 cut(s)	206, 647, 1290
TseFI	GTSAC	2 cut(s)	127, 950
TseI	GCWGC	5 cut(s)	170, 752, 926, 977, 1412
Tsp45I	GTSAC	2 cut(s)	127, 950
TspDTI	ATGAA	6 cut(s)	48, 261, 354, 849, 948, 1434
TspGWI	ACGGA	1 cut(s)	946
VpaK11BI	GGWCC	1 cut(s)	887
XagI	CCTNNNNNAGG	1 cut(s)	882
XapI	RAATTY	5 cut(s)	35, 375, 510, 795, 836
XceI	RCATGY	2 cut(s)	225, 1156
XmnI	GAANNNNTTC	2 cut(s)	701, 1077
XspI	CTAG	4 cut(s)	279, 465, 1148, 1416
ZrmI	AGTACT	1 cut(s)	606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.