Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0006044

Physical Location & Seq

Genomic Coordinates Forward (+)

1705814 .. 1708859

Gene Structure 3046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGGAATACCTGATCGATCATTACTAGATCTAATATACAAAGTCAGGTCTTGGATTTCTGGAGGATCGAGAGTTTTGCGGGTTTTGTCTTGTGAGTTTGATATGCCTAGTAACGGTTGCAAGATGTGTTGTGATTGCAATACAAACACCACCGGTATTGGTCCTAGATATCACTGCCAGAGCTGTGGCAGATGGATTTGTGGAAAGTGTATTCAGGGCTCTGAGTGGGATGGCATCGAGATCAGTGGTGAGGTTGGAGAGAGTGGTATTAAGTTCTGCAAGTTTTGTTCATTGGCTAGATTAAGGAAGGAAGGTGGAAGGAAGAATAGTGAGAAAGTGCATCCGTCTGCCTCTCCCCGAGAAAGCCCTGAACCACCATCCCCCTGCTGTAGTGGCGAAACAGTCAAGTGTTATGCGGATAATGATGAATCCATTCGCGGTGATCATTTCTCAAAGATTTTAGAAGCCCATGATTGCGGTTATTCACCCCATGCTGAGAGGAGTATGACCTCGTTTAGTTCTCACCCATCTCCAATATCTGTTCGTCAGTCTATTAGCAGGAGTGACGAAGAGGAGGCAGAGGATTCTGGAAAGAACTTTGGCAGTCCTTTAAGTGAATATTGTGATGACAATTTGGACATAGATATAAGTAGTGTTAGTTCTAGAAACGAGTTTTACAGTTCAAGGTCACTGGGATCCAATCATTTTGATTGCCCGTCTAGAATTTATTATACTTCTAGTAGAGTTGGGCATTCTGTACAGCAGGGACGGGATGGAATCCTTGTGTCTCAGAATGATGGTCCCTTTGGTCAACAGACTATGGCCGTTTTAAAAAGGCCTGAGAGAGGGACTGAGGATCCAGATATTACTGATGATTGCTCTGATGACCCATCAGTTATCGGTAGTCAATATGAGAAGTCACACAGGCCACTGGATTTTGAAAACAATGGTCTCATCTGGTATCCCCCTCCGCCTGATTATGAGAATGACGAGGCAGAGAGTAATTTCTTTTCTTATGATGATGAAGATGATGACATTGGAGATTCAGGTGCAGTGTTTTCATCAAGCAGTAGCCTCTCGAGCATGTTTCCTGCAAAGGAGAAACAAAATGAGGTTAACAAGGAACCACTTAGAGCTGTGGTACAGGGGCATTTTAGAGCTCTTGTATCACAACTGTTACAAGGTGAGGGTTTCATTGGTAAAGGGGATGGAGATGAGGACTGGCTTGACATAGTTACAACAATTGCGTGGCAAGCGGCAAATTTTGTTAAACCAGATACTAGCAGGGGAGGCAGTATGGATCCTGGTGATTATGTGAAAGTTAAATGTGTTGCATCAGGAAGTCCAAGTGACAGTACCCTTATAAAAGGAGTAGTTTGTACAAAGAATATAAGGCACAAGCGCATGACCTCACAGTACAAAAATCCTAAATTACTTATTTTAGGGGGAGCACTTGAGTATCAGAAAATTCCAAACCAGTTGGCATCTTTTGACACATTGCTACATCAGGAAAACGATCATCTGAGGACGATTATCTCAAAGATAGAGGCTCTTCGCCCCAATGTTCTGCTGGTAGAGAAAAGTGTATCTTCGTATGCTCAAGACTGCCTGCTGGAAAAGGAAATATCATTAGTATTGAATGTCAAAAGGCCAGTATTGGAGCGCATAGCCCAGTGTACTGGTGCACTTATTACTCCATCAATTGACGATATCCCTAAGACCCGTTTGGGACATTGTGAATTGTTCCGGTTAGAAAAAATTACTGAACAGCATGAGCCCACCAATCAGTTTAACAAGAAACCACTGAAAACCCTGATGTTTTTTGAAGGGTGTCCAAGGCATCTTTGCTGCACTGTTCTGCTGAAGGGTGTGTGTGTTGAAGAACTAAAGAAGATCAAGCATGTTGTCCAGTATGCAGTGTTTGCAGCTTACCATTTATCCCTTGAAACATCCTTCCTTGCTGATGAGGGTGCTACTCTGCCCAAGACACCGCTGAGACACTCAATTACCATACCAGACAGGACAACAGCTGATGCAATTTCAGTAGTCCCTAATTCTCTTGCTTTGAACAATTCCCGGGCTGTAACTTTTGCTTCTGCTCAAGATGATAACATTTTGGGTCTGAAGCCGGAAATTGAAGGATTAGAATCTTTGCCCGGGCATCTTGATCCTGGACTTGATTTACCTGTGTCTAATGGTTCTGTTGACTGTGTGGTTGGAAGCACATCTTCTGATGCTTACACTGATGATATAGGAAATAATGTGTTTTTGGGATCTTCTTATCAATACAAGGATATAAATGGAGTCACTGTCCATTCTTCTGAAACAAAATATGTCTCCCAACCAGAGTTGCAAGAAAGTTTGCCTCATGACTCGAGTCAGCATGAGGATAATGAGTTGACAAACTCTGAAAGGATTGATCGAACAACGAAGTTTCAAGCGAGTACTTCTCTTCTGCTGACACTCATCAGAGCATATTGGTATCCTTCTCAAGCCATTGTGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000285 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005942 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0008150 GO:0008152 GO:0008289 GO:0009987 GO:0010008 GO:0010118 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016301 GO:0016307 GO:0016310 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0019898 GO:0030258 GO:0031090 GO:0031410 GO:0031982 GO:0032266 GO:0032991 GO:0035032 GO:0035091 GO:0042147 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061695 GO:0070772 GO:0071704 GO:0090332 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:1901981 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00562 ko04070 ko04145 ko04810 map00562 map04070 map04145 map04810

Pfam Domains

Protein Families

Cpn60_TCP1 PIP5K

Protein Analysis

836

Amino Acids

92.18

Weight (kDa)

5.15

Isoelectric Point (pI)

45.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	401 - 652	8.6e-33	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006044)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71010
fragaria_vesca	FvH4_4g32320 FvH4_4g32320 FvH4_4g32320 FvH4_4g32320 FvH4_4g32320
malus_domestica	MD13G1026200.v1.1 MD16G1029100.v1.1
prunus_persica	Prupe.1G323700_v2.0.a1 Prupe.1G323700_v2.0.a1
pyrus_communis	pycom13g02450 pycom13g02470 pycom16g02480 pycom16g02500
rosa_chinensis	RchiOBHm_Chr4g0441111
rosa_laevigata	RLG00000006113
rosa_multiflora	Rmu_sc0006317.1_g000017 Rmu_sc0027558.1_g000002
rosa_roxburghii	Rroxscaffold_5G00382080
rosa_rugosa	Rorug04G0331100 Rorug04G0331200
rosa_samantha	Rh4AG382800 Rh4BG396600 Rh4CG411700 Rh4DG389400 Rh6CG153000
rosa_wichuraiana	Rw4G033040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1364
AccII	CGCG	1 cut(s)	438
AciI	CCGC	7 cut(s)	79, 416, 438, 477, 971, 1256, 1991
AclWI	GGATC	9 cut(s)	73, 690, 703, 851, 864, 1295, 1308, 2162, 2281
AcoI	YGGCCR	1 cut(s)	822
AcsI	RAATTY	3 cut(s)	723, 1261, 1467
AcuI	CTGAAG	2 cut(s)	1883, 2144
AfaI	GTAC	8 cut(s)	759, 1143, 1357, 1381, 1418, 1678, 2446, 2504
AfiI	CCNNNNNNNGG	2 cut(s)	113, 845
AgeI	ACCGGT	1 cut(s)	152
AgsI	TTSAA	9 cut(s)	684, 941, 1639, 1826, 1880, 1946, 2068, 2138, 2438
AjnI	CCWGG	2 cut(s)	1303, 2170
AluBI	AGCT	5 cut(s)	183, 1136, 1160, 1928, 2030
AluI	AGCT	5 cut(s)	183, 1136, 1160, 1928, 2030
Alw21I	GWGCWC	3 cut(s)	1162, 1453, 1687
Alw26I	GTCTC	4 cut(s)	792, 956, 1990, 2341
Alw44I	GTGCAC	1 cut(s)	1683
AlwI	GGATC	9 cut(s)	73, 690, 703, 851, 864, 1295, 1308, 2162, 2281
Ama87I	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
AoxI	GGCC	4 cut(s)	822, 836, 926, 1649
ApaLI	GTGCAC	1 cut(s)	1683
ApeKI	GCWGC	2 cut(s)	1848, 1925
ApoI	RAATTY	3 cut(s)	723, 1261, 1467
AsiGI	ACCGGT	1 cut(s)	152
Asp700I	GAANNNNTTC	1 cut(s)	432
AspLEI	GCGC	2 cut(s)	1404, 1665
AspS9I	GGNCC	2 cut(s)	161, 800
AsuC2I	CCSGG	4 cut(s)	2077, 2078, 2157, 2158
AsuHPI	GGTGA	6 cut(s)	260, 452, 477, 515, 1196, 1319
AvaI	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
AvaII	GGWCC	2 cut(s)	161, 800
BaeGI	GKGCMC	1 cut(s)	1687
BaeI	ACNNNNGTAYC	2 cut(s)	1442, 1475
BamHI	GGATCC	3 cut(s)	695, 856, 1300
BanII	GRGCYC	3 cut(s)	221, 1162, 1779
Bbv12I	GWGCWC	3 cut(s)	1162, 1453, 1687
BbvI	GCAGC	2 cut(s)	1835, 1937
BccI	CCATC	9 cut(s)	186, 224, 385, 535, 767, 791, 898, 1202, 1705
BceAI	ACGGC	1 cut(s)	809
BcgI	CGANNNNNNTGC	2 cut(s)	58, 92
BciT130I	CCWGG	2 cut(s)	1305, 2172
BciVI	GTATCC	2 cut(s)	972, 2493
BclI	TGATCA	1 cut(s)	442
BcnI	CCSGG	4 cut(s)	2077, 2078, 2157, 2158
BcoDI	GTCTC	4 cut(s)	792, 956, 1990, 2341
BfaI	CTAG	8 cut(s)	26, 108, 165, 297, 663, 720, 738, 1281
BfmI	CTRYAG	1 cut(s)	388
BfuI	GTATCC	2 cut(s)	972, 2493
BglII	AGATCT	1 cut(s)	28
BisI	GCNGC	3 cut(s)	1257, 1849, 1926
BlsI	GCNGC	3 cut(s)	1258, 1850, 1927
BmcAI	AGTACT	1 cut(s)	2446
Bme1390I	CCNGG	6 cut(s)	1305, 2077, 2078, 2157, 2158, 2172
Bme18I	GGWCC	2 cut(s)	161, 800
BmeT110I	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
BmgT120I	GGNCC	2 cut(s)	161, 800
BmiI	GGNNCC	5 cut(s)	697, 802, 858, 1125, 1302
BmrFI	CCNGG	6 cut(s)	1305, 2077, 2078, 2157, 2158, 2172
BmrI	ACTGGG	2 cut(s)	701, 1666
BmsI	GCATC	8 cut(s)	243, 349, 1343, 1493, 1849, 2023, 2170, 2224
BmuI	ACTGGG	2 cut(s)	701, 1666
BoxI	GACNNNNGTC	1 cut(s)	2376
BplI	GAGNNNNNCTC	2 cut(s)	2434, 2466
BpmI	CTGGAG	1 cut(s)	81
BpuEI	CTTGAG	4 cut(s)	1475, 1584, 2085, 2475
BpuMI	CCSGG	4 cut(s)	2077, 2078, 2157, 2158
Bsa29I	ATCGAT	1 cut(s)	16
BsaBI	GATNNNNATC	1 cut(s)	2146
BsaI	GGTCTC	1 cut(s)	956
BsaJI	CCNNGG	3 cut(s)	1835, 2076, 2156
BsaWI	WCCGGW	2 cut(s)	152, 1746
BsaXI	ACNNNNNCTCC	2 cut(s)	2295, 2325
Bsc4I	CCNNNNNNNGG	2 cut(s)	113, 845
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	8 cut(s)	696, 936, 1226, 1477, 1652, 1672, 1684, 1909
Bse3DI	GCAATG	1 cut(s)	1496
Bse8I	GATNNNNATC	1 cut(s)	2146
BseBI	CCWGG	2 cut(s)	1305, 2172
BseCI	ATCGAT	1 cut(s)	16
BseDI	CCNNGG	3 cut(s)	1835, 2076, 2156
BseGI	GGATG	6 cut(s)	235, 340, 377, 778, 1213, 1949
BseJI	GATNNNNATC	1 cut(s)	2146
BseLI	CCNNNNNNNGG	2 cut(s)	113, 845
BseMI	GCAATG	1 cut(s)	1496
BseMII	CTCAG	7 cut(s)	213, 486, 803, 831, 843, 1514, 1985
BseNI	ACTGG	8 cut(s)	696, 936, 1226, 1477, 1652, 1672, 1684, 1909
BseRI	GAGGAG	2 cut(s)	514, 587
BseSI	GKGCMC	1 cut(s)	1687
BseXI	GCAGC	2 cut(s)	1835, 1937
BsgI	GTGCAG	2 cut(s)	1071, 1834
Bsh1236I	CGCG	1 cut(s)	438
BshFI	GGCC	4 cut(s)	824, 838, 928, 1651
BshTI	ACCGGT	1 cut(s)	152
BshVI	ATCGAT	1 cut(s)	16
BsiHKAI	GWGCWC	3 cut(s)	1162, 1453, 1687
BsiHKCI	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
BsiSI	CCGG	5 cut(s)	153, 1747, 2077, 2129, 2157
BslFI	GGGAC	5 cut(s)	780, 786, 862, 1743, 2033
BslI	CCNNNNNNNGG	2 cut(s)	113, 845
BsmAI	GTCTC	4 cut(s)	792, 956, 1990, 2341
BsmFI	GGGAC	5 cut(s)	780, 786, 862, 1743, 2033
BsmI	GAATGC	1 cut(s)	751
BsnI	GGCC	4 cut(s)	824, 838, 928, 1651
Bso31I	GGTCTC	1 cut(s)	956
BsoBI	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
Bsp1286I	GDGCHC	5 cut(s)	221, 1162, 1453, 1687, 1779
Bsp1407I	TGTACA	2 cut(s)	757, 1379
BspACI	CCGC	7 cut(s)	79, 416, 438, 477, 971, 1256, 1991
BspANI	GGCC	4 cut(s)	824, 838, 928, 1651
BspCNI	CTCAG	7 cut(s)	214, 487, 802, 832, 844, 1515, 1986
BspDI	ATCGAT	1 cut(s)	16
BspFNI	CGCG	1 cut(s)	438
BspHI	TCATGA	1 cut(s)	2368
BspLI	GGNNCC	5 cut(s)	697, 802, 858, 1125, 1302
BspPI	GGATC	9 cut(s)	73, 690, 703, 851, 864, 1295, 1308, 2162, 2281
BspQI	GCTCTTC	1 cut(s)	1557
BspTNI	GGTCTC	1 cut(s)	956
BsrDI	GCAATG	1 cut(s)	1496
BsrFI	RCCGGY	1 cut(s)	152
BsrGI	TGTACA	2 cut(s)	757, 1379
BsrI	ACTGG	8 cut(s)	696, 936, 1226, 1477, 1652, 1672, 1684, 1909
BssAI	RCCGGY	1 cut(s)	152
BssECI	CCNNGG	3 cut(s)	1835, 2076, 2156
BssT1I	CCWWGG	1 cut(s)	1835
Bst2UI	CCWGG	2 cut(s)	1305, 2172
Bst4CI	ACNGT	9 cut(s)	116, 403, 680, 1176, 1355, 1416, 1855, 2210, 2311
Bst6I	CTCTTC	3 cut(s)	564, 1557, 2457
BstAPI	GCANNNNNTGC	1 cut(s)	1922
BstAUI	TGTACA	2 cut(s)	757, 1379
BstC8I	GCNNGC	2 cut(s)	1254, 1610
BstDEI	CTNAG	9 cut(s)	222, 495, 789, 840, 852, 1130, 1523, 1716, 1994
BstENI	CCTNNNNNAGG	1 cut(s)	843
BstF5I	GGATG	6 cut(s)	235, 340, 377, 778, 1213, 1949
BstFNI	CGCG	1 cut(s)	438
BstHHI	GCGC	2 cut(s)	1404, 1665
BstMAI	GTCTC	4 cut(s)	792, 956, 1990, 2341
BstMWI	GCNNNNNNNGC	5 cut(s)	393, 1080, 1253, 1290, 1922
BstNI	CCWGG	2 cut(s)	1305, 2172
BstNSI	RCATGY	2 cut(s)	1087, 1904
BstPAI	GACNNNNGTC	1 cut(s)	2376
BstSCI	CCNGG	6 cut(s)	1303, 2075, 2076, 2155, 2156, 2170
BstSFI	CTRYAG	1 cut(s)	388
BstSLI	GKGCMC	1 cut(s)	1687
BstUI	CGCG	1 cut(s)	438
BstV1I	GCAGC	2 cut(s)	1835, 1937
BstX2I	RGATCY	5 cut(s)	28, 695, 856, 1300, 2273
BstXI	CCANNNNNNTGG	2 cut(s)	185, 1679
BstYI	RGATCY	5 cut(s)	28, 695, 856, 1300, 2273
Bsu15I	ATCGAT	1 cut(s)	16
BsuI	GTATCC	2 cut(s)	972, 2493
BsuRI	GGCC	4 cut(s)	824, 838, 928, 1651
BsuTUI	ATCGAT	1 cut(s)	16
BtsCI	GGATG	6 cut(s)	235, 340, 377, 778, 1213, 1949
BtsI	GCAGTG	3 cut(s)	172, 1059, 1923
Cac8I	GCNNGC	2 cut(s)	1254, 1610
CciI	TCATGA	1 cut(s)	2368
CfoI	GCGC	2 cut(s)	1404, 1665
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	2 cut(s)	161, 800
Cfr9I	CCCGGG	2 cut(s)	2076, 2156
ClaI	ATCGAT	1 cut(s)	16
Csp6I	GTAC	8 cut(s)	758, 1142, 1356, 1380, 1417, 1677, 2445, 2503
CspAI	ACCGGT	1 cut(s)	152
CspCI	CAANNNNNGTGG	2 cut(s)	139, 174
CviAII	CATG	8 cut(s)	470, 491, 1084, 1405, 1772, 1901, 2369, 2384
CviQI	GTAC	8 cut(s)	758, 1142, 1356, 1380, 1417, 1677, 2445, 2503
DdeI	CTNAG	9 cut(s)	222, 495, 789, 840, 852, 1130, 1523, 1716, 1994
DraI	TTTAAA	1 cut(s)	831
EaeI	YGGCCR	1 cut(s)	822
Eam1104I	CTCTTC	3 cut(s)	564, 1557, 2457
EarI	CTCTTC	3 cut(s)	564, 1557, 2457
EciI	GGCGGA	1 cut(s)	960
Ecl136II	GAGCTC	1 cut(s)	1160
Eco130I	CCWWGG	1 cut(s)	1835
Eco147I	AGGCCT	1 cut(s)	838
Eco24I	GRGCYC	3 cut(s)	221, 1162, 1779
Eco31I	GGTCTC	1 cut(s)	956
Eco32I	GATATC	2 cut(s)	170, 1711
Eco47I	GGWCC	2 cut(s)	161, 800
Eco53kI	GAGCTC	1 cut(s)	1160
Eco57I	CTGAAG	2 cut(s)	1883, 2144
Eco88I	CYCGRG	5 cut(s)	357, 1078, 2076, 2156, 2374
EcoICRI	GAGCTC	1 cut(s)	1160
EcoNI	CCTNNNNNAGG	1 cut(s)	843
EcoRII	CCWGG	2 cut(s)	1303, 2170
EcoRV	GATATC	2 cut(s)	170, 1711
EcoT14I	CCWWGG	1 cut(s)	1835
EcoT38I	GRGCYC	3 cut(s)	221, 1162, 1779
ErhI	CCWWGG	1 cut(s)	1835
FaeI	CATG	8 cut(s)	473, 494, 1087, 1408, 1775, 1904, 2372, 2387
FalI	AAGNNNNNCTT	4 cut(s)	1573, 1605, 2212, 2244
FaqI	GGGAC	5 cut(s)	780, 786, 862, 1743, 2033
FatI	CATG	8 cut(s)	469, 490, 1083, 1404, 1771, 1900, 2368, 2383
FauI	CCCGC	1 cut(s)	72
FbaI	TGATCA	1 cut(s)	442
Fnu4HI	GCNGC	3 cut(s)	1257, 1849, 1926
FokI	GGATG	6 cut(s)	242, 327, 364, 785, 1220, 1936
FriOI	GRGCYC	3 cut(s)	221, 1162, 1779
Fsp4HI	GCNGC	3 cut(s)	1257, 1849, 1926
FspBI	CTAG	8 cut(s)	26, 108, 165, 297, 663, 720, 738, 1281
GlaI	GCGC	2 cut(s)	1403, 1664
GluI	GCNGC	3 cut(s)	1257, 1849, 1926
GsuI	CTGGAG	1 cut(s)	81
HaeIII	GGCC	4 cut(s)	824, 838, 928, 1651
HapII	CCGG	5 cut(s)	153, 1747, 2077, 2129, 2157
HhaI	GCGC	2 cut(s)	1404, 1665
Hin1II	CATG	8 cut(s)	473, 494, 1087, 1408, 1775, 1904, 2372, 2387
Hin6I	GCGC	2 cut(s)	1402, 1663
HinP1I	GCGC	2 cut(s)	1402, 1663
HincII	GTYRAC	4 cut(s)	812, 1117, 2206, 2400
HindII	GTYRAC	4 cut(s)	812, 1117, 2206, 2400
HinfI	GANTC	8 cut(s)	428, 584, 777, 1043, 2147, 2304, 2372, 2377
HpaI	GTTAAC	1 cut(s)	1117
HpaII	CCGG	5 cut(s)	153, 1747, 2077, 2129, 2157
HphI	GGTGA	6 cut(s)	260, 452, 477, 515, 1196, 1319
Hpy166II	GTNNAC	7 cut(s)	812, 1117, 1677, 1685, 2206, 2400, 2503
Hpy8I	GTNNAC	7 cut(s)	812, 1117, 1677, 1685, 2206, 2400, 2503
HpyAV	CCTTC	8 cut(s)	301, 305, 312, 1820, 1858, 1963, 2132, 2496
HpyCH4III	ACNGT	9 cut(s)	116, 403, 680, 1176, 1355, 1416, 1855, 2210, 2311
HpyF10VI	GCNNNNNNNGC	5 cut(s)	393, 1080, 1253, 1290, 1922
HpyF3I	CTNAG	9 cut(s)	222, 495, 789, 840, 852, 1130, 1523, 1716, 1994
Hsp92II	CATG	8 cut(s)	473, 494, 1087, 1408, 1775, 1904, 2372, 2387
HspAI	GCGC	2 cut(s)	1402, 1663
Ksp22I	TGATCA	1 cut(s)	442
KspAI	GTTAAC	1 cut(s)	1117
LguI	GCTCTTC	1 cut(s)	1557
LmnI	GCTCC	2 cut(s)	1448, 1660
Lsp1109I	GCAGC	2 cut(s)	1835, 1937
LweI	GCATC	8 cut(s)	243, 349, 1343, 1493, 1849, 2023, 2170, 2224
MaeI	CTAG	8 cut(s)	26, 108, 165, 297, 663, 720, 738, 1281
MaeIII	GTNAC	9 cut(s)	110, 563, 687, 918, 1176, 1234, 1349, 2083, 2305
MfeI	CAATTG	2 cut(s)	1242, 1701
MflI	RGATCY	5 cut(s)	28, 695, 856, 1300, 2273
MhlI	GDGCHC	5 cut(s)	221, 1162, 1453, 1687, 1779
MlyI	GAGTC	3 cut(s)	2313, 2366, 2386
MmeI	TCCRAC	2 cut(s)	235, 2197
MroXI	GAANNNNTTC	1 cut(s)	432
MseI	TTAA	8 cut(s)	270, 302, 611, 830, 1116, 1269, 1323, 1791
MspA1I	CMGCKG	2 cut(s)	1993, 2030
MspI	CCGG	5 cut(s)	153, 1747, 2077, 2129, 2157
MspR9I	CCNGG	6 cut(s)	1305, 2077, 2078, 2157, 2158, 2172
MunI	CAATTG	2 cut(s)	1242, 1701
Mva1269I	GAATGC	1 cut(s)	751
MvaI	CCWGG	2 cut(s)	1305, 2172
MvnI	CGCG	1 cut(s)	438
MwoI	GCNNNNNNNGC	5 cut(s)	393, 1080, 1253, 1290, 1922
NciI	CCSGG	4 cut(s)	2077, 2078, 2157, 2158
NlaIII	CATG	8 cut(s)	473, 494, 1087, 1408, 1775, 1904, 2372, 2387
NlaIV	GGNNCC	5 cut(s)	697, 802, 858, 1125, 1302
NmuCI	GTSAC	5 cut(s)	563, 687, 918, 1349, 2305
NspI	RCATGY	2 cut(s)	1087, 1904
PaeR7I	CTCGAG	2 cut(s)	1078, 2374
PagI	TCATGA	1 cut(s)	2368
PceI	AGGCCT	1 cut(s)	838
PciSI	GCTCTTC	1 cut(s)	1557
PctI	GAATGC	1 cut(s)	751
PdmI	GAANNNNTTC	1 cut(s)	432
PfeI	GAWTC	5 cut(s)	428, 584, 777, 1043, 2147
PfoI	TCCNGGA	1 cut(s)	2170
PinAI	ACCGGT	1 cut(s)	152
PkrI	GCNGC	3 cut(s)	1258, 1850, 1927
PleI	GAGTC	3 cut(s)	2312, 2366, 2385
PpsI	GAGTC	3 cut(s)	2312, 2366, 2385
PshAI	GACNNNNGTC	1 cut(s)	2376
PsiI	TTATAA	1 cut(s)	1364
Psp124BI	GAGCTC	1 cut(s)	1162
Psp6I	CCWGG	2 cut(s)	1303, 2170
PspGI	CCWGG	2 cut(s)	1303, 2170
PspN4I	GGNNCC	5 cut(s)	697, 802, 858, 1125, 1302
PspPI	GGNCC	2 cut(s)	161, 800
PspXI	VCTCGAGB	1 cut(s)	2374
PsrI	GAACNNNNNNTAC	2 cut(s)	643, 675
PsuI	RGATCY	5 cut(s)	28, 695, 856, 1300, 2273
PvuII	CAGCTG	1 cut(s)	2030
RsaI	GTAC	8 cut(s)	759, 1143, 1357, 1381, 1418, 1678, 2446, 2504
RsaNI	GTAC	8 cut(s)	758, 1142, 1356, 1380, 1417, 1677, 2445, 2503
SacI	GAGCTC	1 cut(s)	1162
SapI	GCTCTTC	1 cut(s)	1557
SaqAI	TTAA	8 cut(s)	270, 302, 611, 830, 1116, 1269, 1323, 1791
SatI	GCNGC	3 cut(s)	1257, 1849, 1926
Sau96I	GGNCC	2 cut(s)	161, 800
ScaI	AGTACT	1 cut(s)	2446
SchI	GAGTC	3 cut(s)	2313, 2366, 2386
ScrFI	CCNGG	6 cut(s)	1305, 2077, 2078, 2157, 2158, 2172
SduI	GDGCHC	5 cut(s)	221, 1162, 1453, 1687, 1779
SfaNI	GCATC	8 cut(s)	243, 349, 1343, 1493, 1849, 2023, 2170, 2224
SfcI	CTRYAG	1 cut(s)	388
Sfr274I	CTCGAG	2 cut(s)	1078, 2374
SinI	GGWCC	2 cut(s)	161, 800
SlaI	CTCGAG	2 cut(s)	1078, 2374
SmaI	CCCGGG	2 cut(s)	2078, 2158
SmlI	CTYRAG	6 cut(s)	1078, 1454, 1599, 2100, 2374, 2490
SmoI	CTYRAG	6 cut(s)	1078, 1454, 1599, 2100, 2374, 2490
SrfI	GCCCGGGC	1 cut(s)	2158
SseBI	AGGCCT	1 cut(s)	838
SsiI	CCGC	7 cut(s)	79, 416, 438, 477, 971, 1256, 1991
SspI	AATATT	1 cut(s)	620
SspMI	CTAG	8 cut(s)	26, 108, 165, 297, 663, 720, 738, 1281
SstI	GAGCTC	1 cut(s)	1162
StuI	AGGCCT	1 cut(s)	838
StyD4I	CCNGG	6 cut(s)	1303, 2075, 2076, 2155, 2156, 2170
StyI	CCWWGG	1 cut(s)	1835
TaaI	ACNGT	9 cut(s)	116, 403, 680, 1176, 1355, 1416, 1855, 2210, 2311
TaqI	TCGA	6 cut(s)	16, 68, 237, 1079, 2375, 2422
TatI	WGTACW	6 cut(s)	757, 1379, 1416, 1676, 2444, 2502
TauI	GCSGC	1 cut(s)	1259
TfiI	GAWTC	5 cut(s)	428, 584, 777, 1043, 2147
Tru1I	TTAA	8 cut(s)	270, 302, 611, 830, 1116, 1269, 1323, 1791
Tru9I	TTAA	8 cut(s)	270, 302, 611, 830, 1116, 1269, 1323, 1791
TseFI	GTSAC	5 cut(s)	563, 687, 918, 1349, 2305
TseI	GCWGC	2 cut(s)	1848, 1925
Tsp45I	GTSAC	5 cut(s)	563, 687, 918, 1349, 2305
TspDTI	ATGAA	5 cut(s)	279, 441, 1038, 1050, 1183
TspGWI	ACGGA	1 cut(s)	333
TspMI	CCCGGG	2 cut(s)	2076, 2156
VneI	GTGCAC	1 cut(s)	1683
VpaK11BI	GGWCC	2 cut(s)	161, 800
XagI	CCTNNNNNAGG	1 cut(s)	843
XapI	RAATTY	3 cut(s)	723, 1261, 1467
XbaI	TCTAGA	2 cut(s)	662, 719
XceI	RCATGY	2 cut(s)	1087, 1904
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1567
XhoI	CTCGAG	2 cut(s)	1078, 2374
XmaI	CCCGGG	2 cut(s)	2076, 2156
XmnI	GAANNNNTTC	1 cut(s)	432
XspI	CTAG	8 cut(s)	26, 108, 165, 297, 663, 720, 738, 1281
ZrmI	AGTACT	1 cut(s)	2446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.