pycom13g15090

Regulator of Ty1 transposition protein 107 BRCT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0007475
Physical Location & Seq
Forward (+)
10972090 .. 10976844
4755 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g15090.4

Sequence Viewer

Length: 3321 bp
ATGGAGGAGACCCAGTTATTAGAGTTTGATGATGTAGTTGTCAGTGACACTGACAGTGAGGAGTCGGATACAACTGAAGTTTTCGATGATAGTAAGGATCTAAGTGATGATGAATCAGTACAGAGAGGTTCTGGTCAATTAGTGAATGAGGAGAATATTCGCCGCACTCCTTGTGAAAATAGTGTAAATGGGTTAATGGAGCAAGCCAATTATTCGGTCGACAATCAACACAATGCAGGGCTCCATGTTTCTGCTGCAACACCTGTGGTTGAAGGCTCCCCGGAACTGAGACCAGGTTCTGTGCATAAGCATTTTACCTCGGTATGTGCAGCATCCTTACAGGCCTCTGATCTAGCAGCTTGCAGTACAATTATGAAGGGCACCAACAATAAGTCTCGTTCTGTTCGAAGTAATAATCAGTCTTTGGATCAACTTTCTGGTAAAGATAATGCAGTATCTCTTCTAGGGGGTTCAACTATAAATGGAGAAGAAGTCAGGCAGGAACATGATTCAAGGAATGAGAAAAAATGCAGGACTGGTGGTTCAACAGCGAGAAAACTTTTTCCTGAGGATTCAGATGCTGAAAACACTGAAATTTCTCATCACAGAGGTAGTGGTGAAGAAGGGGAAGATTTGCTTCAGTTTCCTTGTAATTTGGCAGGGTTAAGCTATGTTGACTCTCAAGAACCAGGAGAATTATCACAAGCTAATGCACTTGATTTTGTGGATAAGTTCCTCCAAAATAATCTTGACGAGTCTAATAAAGAAGTTGGCCATGGAAAGAGTGCTAGGGACACTTCAAAATTTGTCTCAAGTGCAAAGGGGCCACAAATATTGGCCAAGAAAGCCAATGACAAAAGCATAGATAAAGGGATTTTTGATTGGGATGATAACCGTGAGGATGAAGAAGGAGGTGAATTTTTCCGCCGAAGAAAAGCAGACTTCTTTGATGGTGGAAGCCATGGGTGGAGATCTCTTCCCCAACCCCAGAAGTCTAAAGGGAAAAGACAGGAGGAGAAGAAGGACCTCAAAACACAATTACAAGGAAAGAACAAGATAATAGGTGTAGTTCATTCTGATTCAAAACTATTGTTACATAAATCAAAAGTTGACAAGAAGACAGTACATGAAGATGAAATGAAGCATATAAAGAATCTTGTCAGTGAGCTCGACCAACAGTTCAACAATGACTCCCCAAGAGAGCAGTTGGATACTAATGTTAATAAGAACGATGCGCCTGAAATGATGAATGTAGGCTTTGATACTCAAATGGCAGCTGAAGCTATAGAAGCCTTGTGTTATGGTGTAGGGATTTCCAATTGTGATGCTAGTGATGAAAATCAAGGTGCTGGAAAGAGTCCTCCTGAAGGTTCGATGGGAGAAAAATCAAAGAATATAATTTGTTCAATGAAACCTTCTTCTCGAAAAAGAGGGCGTTTTACTGATGCAGGGGTTGCTTCTCGAGAAACTCGACAAGCCAAGAAAACAAGGGTTGGTGCCAGATTAAGCAAACATTATTCAATTTCACCTCTGGAATTTTCTAAGAATACTAGAAAACAGTGTGAAACAGAGGTGGTGATAACAAAATCAAAGAAGGGGAAGTCCATTGCTAAAAATCATCTTAACATCGACGGGAACAAAAACATGGAGAAAATACCTCCTGTTGCTATTGACCTAAGAACAGAAGGATCTATAAAAAAGAATATACAACAGGATATTGGTACTTTTACACCCATTGCACGTCGAACAAGACGGTCTATGGTGGTAAATCAGTTAAAGAAAGCTGACAAAGCATCCAGTGATTGTGGAAAAGAGTCGAGCGCTCAAACAGAGTATGTTGCAACTAGAGAGAAAATAATTAGTTTCACAGGTGGTAAGGTGTCTAATGTGTTGAATGCAAAGTTTTCAAAATCGGGTCCCAGTCGATCCGGAGAAGTTGGAAATAATAAACCAAGCCAACATGATGGTTCAGATCTCAAATTTGAAGCTATTTGCTATGGCATCAAATTGGATGCTTTAAGCTTCTCCAAGGGAAAAAGATCTAGGAGAAAGTTATCTGGTCAGGTTTGTGGGCCTGATAACTTAAATGTTCCGTCTACCCCATTTGTTCAGCCAGACAAAGTTGGACAGCGTGTCACTAGGCACACAAGATCTAAGGGTGCTGCTCAAAGAATTTGTGTTGATGTAAAATCAACAAGAAGAACCCGATCATGTACACGTGGAGACCAGAATTTGGCTAGAAAGTATGCGCATCAAAGTGTAAAAAGTGATCCTGGGAAAGTTCCTCTTCACAAGGATGGGAGAATGATATCAGAGATTATAACTGGTGAAGAGGCAGTTGGAATTCCTGACAGGAGGAGTGATGCAAATCCATCTTCTGCTACTAAAATGAGAGATGAATCCCCACTAGGGAAATGCAAGCCATCGGATTCAGGTTGTGCTACTCCAGTTAACAGTAAGGTGCCTGCCATTGCCAATGATGCATCTCCAGTTTGTATGGGTAGTGAATATTTCAAACAGACATGCAAGAAGACCCCTTCAAGGCCAGGTCTTTTGAAAGAAATCCGTGACTTAAGTGCAAATGGGAATACACCAACTTCAGCATCAAAGGATCTAAGGAAGAGAGATAGGACTGATGTTCGAGTATTGTATAGCCACCACTTGGATGACGATGTAATTAAGCATCAGAAAAAGATTTTGGGCCGACTAGGAGTTTCTGTAGCATCCTCTATGACAGATGCCACGCACTTCATAGCAGATCAATTCGTGCGTACAAGGAATATGTTAGAAGCTATTGCTGCTGGAAAACCAGTGGTAACGCATTTATGGCTTGATAGCTGTGGACAAGCTAGTTGTTTCATCGATGAGAAAAACTATATACTAAGGGATACTAAGAAGGAGAAGGAGTTCGGCTTTAGCATGCCAGCTTCGTTGGCACATGCGTGCCAGCATCCACTTCTGGAGGGTCGTAAAGTCTTCATCACCCCAAATATGAAGCCTGGTAAAGATATAATTTCAAGTCTGGTCAAAGCAGTCGGTGGCCAGGCTATAGAAAGAATTGGTAGATCGATTTTGGAGGCTGATAAAATTCACGATGATCTGTTGGTTGTATCTTGTGAAGAAGATTATGAAATCTGTGTGCCTTTACTCGAAAAAGGAGCTACAGTTTACAGCTCAGAGTTGCTATTGAATGGGATTGTTACTCAGAAGCTGAAGTTTGAAAGGCATCGCCTCTTTACAGATCAAGTTAAGAAAACCCGTTCCACCATATGGCTGAGGAAAGATGGCAACAAGTTCCTCCCTGTGAAGAAAGATAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000414 GO:0000416 GO:0000726 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010212 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030330 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034708 GO:0034968 GO:0035065 GO:0035066 GO:0035097 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043414 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045191 GO:0045830 GO:0045893 GO:0045911 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0072331 GO:0080090 GO:0090304 GO:1901360 GO:1901564 GO:1901983 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903320 GO:1903322 GO:1903506 GO:1903508 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000142 GO:2000144 GO:2000756 GO:2000758 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

1107

Amino Acids

121.86

Weight (kDa)

8.87

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2321
Acc16I TGCGCA 1 cut(s) 2250
AccB1I GGYRCC 3 cut(s) 380, 1496, 2461
AccB7I CCANNNNNTGG 3 cut(s) 2233, 2662, 3270
AccI GTMKAC 2 cut(s) 219, 2096
AccIII TCCGGA 1 cut(s) 1928
AciI CCGC 2 cut(s) 163, 925
AclWI GGATC 6 cut(s) 105, 435, 1696, 1920, 2264, 2619
AcoI YGGCCR 3 cut(s) 772, 837, 3040
AcsI RAATTY 9 cut(s) 594, 803, 917, 1535, 1979, 2172, 2230, 2343, 3087
AcuI CTGAAG 6 cut(s) 96, 623, 1299, 1386, 2583, 3233
AcvI CACGTG 1 cut(s) 2219
AfaI GTAC 6 cut(s) 120, 367, 1125, 1723, 2215, 2773
AfeI AGCGCT 1 cut(s) 1822
AfiI CCNNNNNNNGG 6 cut(s) 1367, 2233, 2409, 2541, 2662, 3270
AflII CTTAAG 1 cut(s) 2572
AflIII ACRYGT 1 cut(s) 2216
AhdI GACNNNNNGTC 1 cut(s) 2132
AjiI CACGTC 1 cut(s) 1742
AjnI CCWGG 6 cut(s) 292, 688, 2272, 2545, 2998, 3042
AjuI GAANNNNNNNTTGG 4 cut(s) 2322, 2354, 2681, 2713
AleI CACNNNNGTG 1 cut(s) 2941
AloI GAACNNNNNNTCC 4 cut(s) 526, 558, 2891, 2923
Alw21I GWGCWC 1 cut(s) 1170
Alw26I GTCTC 5 cut(s) 2, 283, 399, 814, 2217
AlwI GGATC 6 cut(s) 105, 435, 1696, 1920, 2264, 2619
AlwNI CAGNNNCTG 3 cut(s) 299, 581, 3211
Ama87I CYCGRG 1 cut(s) 1461
Aor13HI TCCGGA 1 cut(s) 1928
Aor51HI AGCGCT 1 cut(s) 1822
AoxI GGCC 8 cut(s) 342, 772, 824, 837, 2072, 2543, 2701, 3040
ApeKI GCWGC 6 cut(s) 254, 329, 356, 1274, 2162, 2798
ApoI RAATTY 9 cut(s) 594, 803, 917, 1535, 1979, 2172, 2230, 2343, 3087
Asp700I GAANNNNTTC 1 cut(s) 2906
AspLEI GCGC 3 cut(s) 1237, 1823, 2251
AspS9I GGNCC 5 cut(s) 824, 1024, 1916, 2072, 2701
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 6 cut(s) 629, 926, 1518, 1588, 2339, 2974
AsuII TTCGAA 1 cut(s) 406
AvaI CYCGRG 1 cut(s) 1461
AvaII GGWCC 2 cut(s) 1024, 1916
AxyI CCTNAGG 1 cut(s) 567
BaeGI GKGCMC 1 cut(s) 383
BaeI ACNNNNGTAYC 2 cut(s) 1203, 1236
BalI TGGCCA 3 cut(s) 774, 839, 3042
BanI GGYRCC 3 cut(s) 380, 1496, 2461
BanII GRGCYC 2 cut(s) 243, 1170
BbrPI CACGTG 1 cut(s) 2219
BbsI GAAGAC 3 cut(s) 1124, 2537, 2968
Bbv12I GWGCWC 1 cut(s) 1170
BbvCI CCTCAGC 1 cut(s) 3275
BbvI GCAGC 6 cut(s) 241, 341, 368, 1286, 2149, 2785
BccI CCATC 7 cut(s) 944, 1369, 1958, 2291, 2380, 2431, 3278
BciT130I CCWGG 6 cut(s) 294, 690, 2274, 2547, 3000, 3044
BciVI GTATCC 3 cut(s) 61, 1204, 2881
BcnI CCSGG 1 cut(s) 281
BcoDI GTCTC 5 cut(s) 2, 283, 399, 814, 2217
BfmI CTRYAG 4 cut(s) 1284, 2718, 3048, 3162
BfoI RGCGCY 1 cut(s) 1824
BfrI CTTAAG 1 cut(s) 2572
BfuI GTATCC 3 cut(s) 61, 1204, 2881
BglII AGATCT 4 cut(s) 971, 1972, 2039, 2150
BisI GCNGC 7 cut(s) 163, 255, 330, 357, 1275, 2163, 2799
BlsI GCNGC 7 cut(s) 164, 256, 331, 358, 1276, 2164, 2800
Bme1390I CCNGG 7 cut(s) 281, 294, 690, 2274, 2547, 3000, 3044
Bme18I GGWCC 2 cut(s) 1024, 1916
BmeRI GACNNNNNGTC 1 cut(s) 2132
BmeT110I CYCGRG 1 cut(s) 1461
BmgBI CACGTC 1 cut(s) 1742
BmgT120I GGNCC 5 cut(s) 824, 1024, 1916, 2072, 2701
BmiI GGNNCC 8 cut(s) 242, 277, 382, 825, 1498, 1917, 1918, 2463
BmrFI CCNGG 7 cut(s) 281, 294, 690, 2274, 2547, 3000, 3044
BmrI ACTGGG 2 cut(s) 7, 1914
BmuI ACTGGG 2 cut(s) 7, 1914
BpiI GAAGAC 3 cut(s) 1124, 2537, 2968
BpmI CTGGAG 3 cut(s) 2430, 2472, 2981
Bpu10I CCTNAGC 1 cut(s) 3275
Bpu14I TTCGAA 1 cut(s) 406
BpuEI CTTGAG 2 cut(s) 666, 796
BpuMI CCSGG 1 cut(s) 281
Bsa29I ATCGAT 2 cut(s) 2862, 3068
BsaAI YACGTR 1 cut(s) 2219
BsaBI GATNNNNATC 2 cut(s) 1338, 2367
BsaI GGTCTC 3 cut(s) 2, 283, 2217
BsaJI CCNNGG 6 cut(s) 279, 318, 775, 961, 2028, 2273
BsaWI WCCGGW 1 cut(s) 1928
Bsc4I CCNNNNNNNGG 6 cut(s) 1367, 2233, 2409, 2541, 2662, 3270
Bse1I ACTGG 8 cut(s) 13, 541, 1797, 1920, 2329, 2447, 2489, 2810
Bse21I CCTNAGG 1 cut(s) 567
Bse3DI GCAATG 3 cut(s) 1605, 1734, 2469
Bse8I GATNNNNATC 2 cut(s) 1338, 2367
BseAI TCCGGA 1 cut(s) 1928
BseBI CCWGG 6 cut(s) 294, 690, 2274, 2547, 3000, 3044
BseCI ATCGAT 2 cut(s) 2862, 3068
BseDI CCNNGG 6 cut(s) 279, 318, 775, 961, 2028, 2273
BseGI GGATG 9 cut(s) 332, 892, 907, 1793, 2017, 2302, 2671, 2723, 2950
BseJI GATNNNNATC 2 cut(s) 1338, 2367
BseLI CCNNNNNNNGG 6 cut(s) 1367, 2233, 2409, 2541, 2662, 3270
BseMI GCAATG 3 cut(s) 1605, 1734, 2469
BseMII CTCAG 5 cut(s) 278, 558, 3189, 3218, 3266
BseNI ACTGG 8 cut(s) 13, 541, 1797, 1920, 2329, 2447, 2489, 2810
BseRI GAGGAG 5 cut(s) 20, 74, 164, 1028, 2371
BseSI GKGCMC 1 cut(s) 383
BseXI GCAGC 6 cut(s) 241, 341, 368, 1286, 2149, 2785
BsgI GTGCAG 1 cut(s) 348
Bsh1285I CGRYCG 1 cut(s) 219
BshFI GGCC 8 cut(s) 344, 774, 826, 839, 2074, 2545, 2703, 3042
BshNI GGYRCC 3 cut(s) 380, 1496, 2461
BshVI ATCGAT 2 cut(s) 2862, 3068
BsiEI CGRYCG 1 cut(s) 219
BsiHKAI GWGCWC 1 cut(s) 1170
BsiHKCI CYCGRG 1 cut(s) 1461
BsiSI CCGG 2 cut(s) 281, 1929
BslFI GGGAC 2 cut(s) 806, 1902
BslI CCNNNNNNNGG 6 cut(s) 1367, 2233, 2409, 2541, 2662, 3270
BsmAI GTCTC 5 cut(s) 2, 283, 399, 814, 2217
BsmFI GGGAC 2 cut(s) 806, 1902
BsmI GAATGC 1 cut(s) 1900
BsnI GGCC 8 cut(s) 344, 774, 826, 839, 2074, 2545, 2703, 3042
Bso31I GGTCTC 3 cut(s) 2, 283, 2217
BsoBI CYCGRG 1 cut(s) 1461
Bsp119I TTCGAA 1 cut(s) 406
Bsp1286I GDGCHC 3 cut(s) 243, 383, 1170
Bsp13I TCCGGA 1 cut(s) 1928
Bsp1407I TGTACA 1 cut(s) 2213
Bsp19I CCATGG 2 cut(s) 775, 961
BspACI CCGC 2 cut(s) 163, 925
BspANI GGCC 8 cut(s) 344, 774, 826, 839, 2074, 2545, 2703, 3042
BspCNI CTCAG 5 cut(s) 279, 559, 3188, 3217, 3267
BspDI ATCGAT 2 cut(s) 2862, 3068
BspEI TCCGGA 1 cut(s) 1928
BspLI GGNNCC 8 cut(s) 242, 277, 382, 825, 1498, 1917, 1918, 2463
BspPI GGATC 6 cut(s) 105, 435, 1696, 1920, 2264, 2619
BspT104I TTCGAA 1 cut(s) 406
BspT107I GGYRCC 3 cut(s) 380, 1496, 2461
BspTI CTTAAG 1 cut(s) 2572
BspTNI GGTCTC 3 cut(s) 2, 283, 2217
BsrDI GCAATG 3 cut(s) 1605, 1734, 2469
BsrGI TGTACA 1 cut(s) 2213
BsrI ACTGG 8 cut(s) 13, 541, 1797, 1920, 2329, 2447, 2489, 2810
BssECI CCNNGG 6 cut(s) 279, 318, 775, 961, 2028, 2273
BssT1I CCWWGG 3 cut(s) 775, 961, 2028
Bst2UI CCWGG 6 cut(s) 294, 690, 2274, 2547, 3000, 3044
Bst4CI ACNGT 8 cut(s) 56, 896, 1123, 1179, 1560, 1755, 2456, 3166
Bst6I CTCTTC 5 cut(s) 465, 981, 2292, 2325, 2615
BstAFI CTTAAG 1 cut(s) 2572
BstAPI GCANNNNNTGC 1 cut(s) 1454
BstAUI TGTACA 1 cut(s) 2213
BstBAI YACGTR 1 cut(s) 2219
BstBI TTCGAA 1 cut(s) 406
BstC8I GCNNGC 8 cut(s) 204, 361, 2420, 2466, 2921, 2925, 2944, 2948
BstDSI CCRYGG 2 cut(s) 775, 961
BstENI CCTNNNNNAGG 1 cut(s) 1365
BstF5I GGATG 9 cut(s) 332, 892, 907, 1793, 2017, 2302, 2671, 2723, 2950
BstH2I RGCGCY 1 cut(s) 1824
BstHHI GCGC 3 cut(s) 1237, 1823, 2251
BstMAI GTCTC 5 cut(s) 2, 283, 399, 814, 2217
BstMCI CGRYCG 1 cut(s) 219
BstMWI GCNNNNNNNGC 9 cut(s) 845, 1280, 1289, 1454, 1790, 2480, 2798, 2827, 2933
BstNI CCWGG 6 cut(s) 294, 690, 2274, 2547, 3000, 3044
BstNSI RCATGY 3 cut(s) 2526, 2923, 2942
BstSCI CCNGG 7 cut(s) 279, 292, 688, 2272, 2545, 2998, 3042
BstSFI CTRYAG 4 cut(s) 1284, 2718, 3048, 3162
BstSLI GKGCMC 1 cut(s) 383
BstV1I GCAGC 6 cut(s) 241, 341, 368, 1286, 2149, 2785
BstV2I GAAGAC 3 cut(s) 1124, 2537, 2968
BstX2I RGATCY 7 cut(s) 97, 971, 1688, 1972, 2039, 2150, 2611
BstXI CCANNNNNNTGG 1 cut(s) 1964
BstYI RGATCY 7 cut(s) 97, 971, 1688, 1972, 2039, 2150, 2611
Bsu15I ATCGAT 2 cut(s) 2862, 3068
Bsu36I CCTNAGG 1 cut(s) 567
BsuI GTATCC 3 cut(s) 61, 1204, 2881
BsuRI GGCC 8 cut(s) 344, 774, 826, 839, 2074, 2545, 2703, 3042
BsuTUI ATCGAT 2 cut(s) 2862, 3068
BtgI CCRYGG 2 cut(s) 775, 961
BtgZI GCGATG 1 cut(s) 3212
BtrI CACGTC 1 cut(s) 1742
BtsCI GGATG 9 cut(s) 332, 892, 907, 1793, 2017, 2302, 2671, 2723, 2950
BtsIMutI CAGTG 8 cut(s) 48, 49, 61, 588, 1168, 1565, 1804, 2817
Cac8I GCNNGC 8 cut(s) 204, 361, 2420, 2466, 2921, 2925, 2944, 2948
CaiI CAGNNNCTG 3 cut(s) 299, 581, 3211
CfoI GCGC 3 cut(s) 1237, 1823, 2251
Cfr13I GGNCC 5 cut(s) 824, 1024, 1916, 2072, 2701
ClaI ATCGAT 2 cut(s) 2862, 3068
CsiI ACCWGGT 1 cut(s) 292
Csp6I GTAC 6 cut(s) 119, 366, 1124, 1722, 2214, 2772
CspCI CAANNNNNGTGG 4 cut(s) 246, 281, 816, 851
CviQI GTAC 6 cut(s) 119, 366, 1124, 1722, 2214, 2772
DriI GACNNNNNGTC 1 cut(s) 2132
EaeI YGGCCR 3 cut(s) 772, 837, 3040
Eam1104I CTCTTC 5 cut(s) 465, 981, 2292, 2325, 2615
Eam1105I GACNNNNNGTC 1 cut(s) 2132
EarI CTCTTC 5 cut(s) 465, 981, 2292, 2325, 2615
EciI GGCGGA 1 cut(s) 914
Ecl136II GAGCTC 1 cut(s) 1168
Eco130I CCWWGG 3 cut(s) 775, 961, 2028
Eco147I AGGCCT 1 cut(s) 344
Eco24I GRGCYC 2 cut(s) 243, 1170
Eco31I GGTCTC 3 cut(s) 2, 283, 2217
Eco32I GATATC 1 cut(s) 2310
Eco47I GGWCC 2 cut(s) 1024, 1916
Eco47III AGCGCT 1 cut(s) 1822
Eco53kI GAGCTC 1 cut(s) 1168
Eco57I CTGAAG 6 cut(s) 96, 623, 1299, 1386, 2583, 3233
Eco72I CACGTG 1 cut(s) 2219
Eco81I CCTNAGG 1 cut(s) 567
Eco88I CYCGRG 1 cut(s) 1461
EcoICRI GAGCTC 1 cut(s) 1168
EcoNI CCTNNNNNAGG 1 cut(s) 1365
EcoO109I RGGNCCY 2 cut(s) 1024, 1916
EcoRI GAATTC 1 cut(s) 2343
EcoRII CCWGG 6 cut(s) 292, 688, 2272, 2545, 2998, 3042
EcoRV GATATC 1 cut(s) 2310
EcoT14I CCWWGG 3 cut(s) 775, 961, 2028
EcoT22I ATGCAT 1 cut(s) 2485
EcoT38I GRGCYC 2 cut(s) 243, 1170
ErhI CCWWGG 3 cut(s) 775, 961, 2028
FalI AAGNNNNNCTT 4 cut(s) 621, 653, 2271, 2303
FaqI GGGAC 2 cut(s) 806, 1902
FauNDI CATATG 1 cut(s) 3269
FblI GTMKAC 2 cut(s) 219, 2096
Fnu4HI GCNGC 7 cut(s) 163, 255, 330, 357, 1275, 2163, 2799
FokI GGATG 9 cut(s) 319, 899, 914, 1780, 2024, 2309, 2678, 2710, 2937
FriOI GRGCYC 2 cut(s) 243, 1170
Fsp4HI GCNGC 7 cut(s) 163, 255, 330, 357, 1275, 2163, 2799
FspAI RTGCGCAY 1 cut(s) 2250
FspI TGCGCA 1 cut(s) 2250
GlaI GCGC 3 cut(s) 1236, 1822, 2250
GluI GCNGC 7 cut(s) 163, 255, 330, 357, 1275, 2163, 2799
GsuI CTGGAG 3 cut(s) 2430, 2472, 2981
HaeII RGCGCY 1 cut(s) 1824
HaeIII GGCC 8 cut(s) 344, 774, 826, 839, 2074, 2545, 2703, 3042
HapII CCGG 2 cut(s) 281, 1929
HhaI GCGC 3 cut(s) 1237, 1823, 2251
Hin6I GCGC 3 cut(s) 1235, 1821, 2249
HinP1I GCGC 3 cut(s) 1235, 1821, 2249
HincII GTYRAC 4 cut(s) 220, 676, 1111, 2452
HindII GTYRAC 4 cut(s) 220, 676, 1111, 2452
HindIII AAGCTT 1 cut(s) 2020
HpaI GTTAAC 1 cut(s) 2452
HpaII CCGG 2 cut(s) 281, 1929
HphI GGTGA 6 cut(s) 629, 926, 1518, 1588, 2339, 2974
Hpy166II GTNNAC 8 cut(s) 220, 676, 1111, 2097, 2216, 2452, 2843, 3169
Hpy8I GTNNAC 8 cut(s) 220, 676, 1111, 2097, 2216, 2452, 2843, 3169
Hpy99I CGWCG 2 cut(s) 1634, 1746
HpyCH4III ACNGT 8 cut(s) 56, 896, 1123, 1179, 1560, 1755, 2456, 3166
HpyCH4IV ACGT 2 cut(s) 1741, 2218
HpyF10VI GCNNNNNNNGC 9 cut(s) 845, 1280, 1289, 1454, 1790, 2480, 2798, 2827, 2933
HpySE526I ACGT 2 cut(s) 1741, 2218
HspAI GCGC 3 cut(s) 1235, 1821, 2249
KflI GGGWCCC 1 cut(s) 1916
Kpn2I TCCGGA 1 cut(s) 1928
KspAI GTTAAC 1 cut(s) 2452
LmnI GCTCC 4 cut(s) 199, 246, 281, 3158
Lsp1109I GCAGC 6 cut(s) 241, 341, 368, 1286, 2149, 2785
MabI ACCWGGT 1 cut(s) 292
MaeII ACGT 2 cut(s) 1741, 2218
MaeIII GTNAC 6 cut(s) 44, 1092, 2134, 2567, 2815, 3199
MfeI CAATTG 1 cut(s) 1318
MflI RGATCY 7 cut(s) 97, 971, 1688, 1972, 2039, 2150, 2611
MhlI GDGCHC 3 cut(s) 243, 383, 1170
MlsI TGGCCA 3 cut(s) 774, 839, 3042
MluNI TGGCCA 3 cut(s) 774, 839, 3042
MlyI GAGTC 6 cut(s) 71, 671, 764, 1184, 1366, 1823
MmeI TCCRAC 5 cut(s) 45, 1188, 1918, 2104, 2320
Mox20I TGGCCA 3 cut(s) 774, 839, 3042
Mph1103I ATGCAT 1 cut(s) 2485
MroI TCCGGA 1 cut(s) 1928
MroXI GAANNNNTTC 1 cut(s) 2906
MscI TGGCCA 3 cut(s) 774, 839, 3042
MslI CAYNNNNRTG 5 cut(s) 1131, 2256, 2295, 2664, 2941
Msp20I TGGCCA 3 cut(s) 774, 839, 3042
MspA1I CMGCKG 1 cut(s) 1277
MspCI CTTAAG 1 cut(s) 2572
MspI CCGG 2 cut(s) 281, 1929
MspR9I CCNGG 7 cut(s) 281, 294, 690, 2274, 2547, 3000, 3044
MunI CAATTG 1 cut(s) 1318
Mva1269I GAATGC 1 cut(s) 1900
MvaI CCWGG 6 cut(s) 294, 690, 2274, 2547, 3000, 3044
MwoI GCNNNNNNNGC 9 cut(s) 845, 1280, 1289, 1454, 1790, 2480, 2798, 2827, 2933
NciI CCSGG 1 cut(s) 281
NcoI CCATGG 2 cut(s) 775, 961
NdeI CATATG 1 cut(s) 3269
NlaIV GGNNCC 8 cut(s) 242, 277, 382, 825, 1498, 1917, 1918, 2463
NmuCI GTSAC 3 cut(s) 44, 2134, 2567
NsbI TGCGCA 1 cut(s) 2250
NsiI ATGCAT 1 cut(s) 2485
NspI RCATGY 3 cut(s) 2526, 2923, 2942
NspV TTCGAA 1 cut(s) 406
OliI CACNNNNGTG 1 cut(s) 2941
PaeI GCATGC 1 cut(s) 2923
PaeR7I CTCGAG 1 cut(s) 1461
PceI AGGCCT 1 cut(s) 344
PcsI WCGNNNNNNNCGW 2 cut(s) 403, 1468
PctI GAATGC 1 cut(s) 1900
PdmI GAANNNNTTC 1 cut(s) 2906
PfeI GAWTC 7 cut(s) 113, 509, 572, 1079, 1153, 2399, 2429
PflMI CCANNNNNTGG 3 cut(s) 2233, 2662, 3270
PkrI GCNGC 7 cut(s) 164, 256, 331, 358, 1276, 2164, 2800
PleI GAGTC 6 cut(s) 70, 671, 763, 1184, 1365, 1822
PmaCI CACGTG 1 cut(s) 2219
PmlI CACGTG 1 cut(s) 2219
PpsI GAGTC 6 cut(s) 70, 671, 763, 1184, 1365, 1822
Ppu21I YACGTR 1 cut(s) 2219
PpuMI RGGWCCY 2 cut(s) 1024, 1916
PsiI TTATAA 1 cut(s) 2321
Psp124BI GAGCTC 1 cut(s) 1170
Psp5II RGGWCCY 2 cut(s) 1024, 1916
Psp6I CCWGG 6 cut(s) 292, 688, 2272, 2545, 2998, 3042
PspCI CACGTG 1 cut(s) 2219
PspGI CCWGG 6 cut(s) 292, 688, 2272, 2545, 2998, 3042
PspN4I GGNNCC 8 cut(s) 242, 277, 382, 825, 1498, 1917, 1918, 2463
PspPI GGNCC 5 cut(s) 824, 1024, 1916, 2072, 2701
PspPPI RGGWCCY 2 cut(s) 1024, 1916
PstNI CAGNNNCTG 3 cut(s) 299, 581, 3211
PsuI RGATCY 7 cut(s) 97, 971, 1688, 1972, 2039, 2150, 2611
PvuII CAGCTG 1 cut(s) 1277
RsaI GTAC 6 cut(s) 120, 367, 1125, 1723, 2215, 2773
RsaNI GTAC 6 cut(s) 119, 366, 1124, 1722, 2214, 2772
RseI CAYNNNNRTG 5 cut(s) 1131, 2256, 2295, 2664, 2941
SacI GAGCTC 1 cut(s) 1170
SalI GTCGAC 1 cut(s) 218
SatI GCNGC 7 cut(s) 163, 255, 330, 357, 1275, 2163, 2799
Sau96I GGNCC 5 cut(s) 824, 1024, 1916, 2072, 2701
SchI GAGTC 6 cut(s) 71, 671, 764, 1184, 1366, 1823
ScrFI CCNGG 7 cut(s) 281, 294, 690, 2274, 2547, 3000, 3044
SduI GDGCHC 3 cut(s) 243, 383, 1170
SexAI ACCWGGT 1 cut(s) 292
SfcI CTRYAG 4 cut(s) 1284, 2718, 3048, 3162
Sfr274I CTCGAG 1 cut(s) 1461
SfuI TTCGAA 1 cut(s) 406
SinI GGWCC 2 cut(s) 1024, 1916
SlaI CTCGAG 1 cut(s) 1461
SmiMI CAYNNNNRTG 5 cut(s) 1131, 2256, 2295, 2664, 2941
SmlI CTYRAG 4 cut(s) 681, 811, 1461, 2572
SmoI CTYRAG 4 cut(s) 681, 811, 1461, 2572
SphI GCATGC 1 cut(s) 2923
SseBI AGGCCT 1 cut(s) 344
SsiI CCGC 2 cut(s) 163, 925
SspI AATATT 3 cut(s) 157, 834, 2510
SstI GAGCTC 1 cut(s) 1170
StuI AGGCCT 1 cut(s) 344
StyD4I CCNGG 7 cut(s) 279, 292, 688, 2272, 2545, 2998, 3042
StyI CCWWGG 3 cut(s) 775, 961, 2028
TaaI ACNGT 8 cut(s) 56, 896, 1123, 1179, 1560, 1755, 2456, 3166
TaiI ACGT 2 cut(s) 1744, 2221
TaqII GACCGA 1 cut(s) 205
TatI WGTACW 4 cut(s) 118, 365, 1123, 2213
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 7 cut(s) 113, 509, 572, 1079, 1153, 2399, 2429
TscAI CASTG 8 cut(s) 49, 55, 61, 595, 1168, 1565, 1804, 2817
TseFI GTSAC 3 cut(s) 44, 2134, 2567
TseI GCWGC 6 cut(s) 254, 329, 356, 1274, 2162, 2798
Tsp45I GTSAC 3 cut(s) 44, 2134, 2567
TspGWI ACGGA 2 cut(s) 2082, 2555
TspRI CASTG 8 cut(s) 49, 55, 61, 595, 1168, 1565, 1804, 2817
Van91I CCANNNNNTGG 3 cut(s) 2233, 2662, 3270
Vha464I CTTAAG 1 cut(s) 2572
VpaK11BI GGWCC 2 cut(s) 1024, 1916
XagI CCTNNNNNAGG 1 cut(s) 1365
XapI RAATTY 9 cut(s) 594, 803, 917, 1535, 1979, 2172, 2230, 2343, 3087
XceI RCATGY 3 cut(s) 2526, 2923, 2942
XhoI CTCGAG 1 cut(s) 1461
XmiI GTMKAC 2 cut(s) 219, 2096
XmnI GAANNNNTTC 1 cut(s) 2906
Zsp2I ATGCAT 1 cut(s) 2485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.