Regulator of Ty1 transposition protein 107 BRCT domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21480 |
| fragaria_vesca | FvH4_4g17010 FvH4_4g17010 |
| malus_domestica | MD13G1175000.v1.1 MD16G1176700.v1.1 |
| prunus_persica | Prupe.1G143500_v2.0.a1 Prupe.1G143500_v2.0.a1 Prupe.1G143500_v2.0.a1 Prupe.1G143500_v2.0.a1 |
| pyrus_communis | pycom13g15080 pycom13g15090 pycom13g21560 pycom16g14820 |
| rosa_chinensis | RchiOBHm_Chr4g0420701 |
| rosa_laevigata | RLG00000007741 |
| rosa_multiflora | Rmu_sc0007337.1_g000005 Rmu_sc0025789.1_g000001 Rmu_sc0034799.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00363220 |
| rosa_rugosa | Rorug04G0165600 |
| rosa_samantha | Rh4AG227100 Rh4BG229800 Rh4CG242000 Rh4DG225400 |
| rosa_wichuraiana | Rw4G019650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1124, 1156 |
| AccBSI | CCGCTC | 1 cut(s) | 1316 |
| AccI | GTMKAC | 8 cut(s) | 156, 300, 348, 489, 942, 1377, 2034, 3081 |
| AccII | CGCG | 1 cut(s) | 1142 |
| AcoI | YGGCCR | 2 cut(s) | 44, 54 |
| AcsI | RAATTY | 1 cut(s) | 1082 |
| AcuI | CTGAAG | 1 cut(s) | 1241 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 30, 31, 32, 1297, 2608, 2758, 3121 |
| AgeI | ACCGGT | 1 cut(s) | 3121 |
| AgsI | TTSAA | 1 cut(s) | 110 |
| AluBI | AGCT | 4 cut(s) | 113, 162, 1147, 1219 |
| AluI | AGCT | 4 cut(s) | 113, 162, 1147, 1219 |
| Alw21I | GWGCWC | 1 cut(s) | 1257 |
| Ama87I | CYCGRG | 1 cut(s) | 30 |
| AoxI | GGCC | 3 cut(s) | 44, 54, 1260 |
| ApeKI | GCWGC | 2 cut(s) | 68, 1176 |
| ApoI | RAATTY | 1 cut(s) | 1082 |
| AsiGI | ACCGGT | 1 cut(s) | 3121 |
| AspLEI | GCGC | 1 cut(s) | 1010 |
| AvaI | CYCGRG | 1 cut(s) | 30 |
| BanI | GGYRCC | 2 cut(s) | 1124, 1156 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 836, 868 |
| Bbv12I | GWGCWC | 1 cut(s) | 1257 |
| BbvI | GCAGC | 2 cut(s) | 80, 1188 |
| BclI | TGATCA | 1 cut(s) | 115 |
| BfmI | CTRYAG | 3 cut(s) | 157, 949, 1174 |
| BfoI | RGCGCY | 1 cut(s) | 1011 |
| BisI | GCNGC | 7 cut(s) | 47, 69, 830, 1177, 1352, 1424, 1454 |
| BlpI | GCTNAGC | 1 cut(s) | 1308 |
| BlsI | GCNGC | 7 cut(s) | 48, 70, 831, 1178, 1353, 1425, 1455 |
| BmcAI | AGTACT | 3 cut(s) | 1865, 2000, 2135 |
| BmeT110I | CYCGRG | 1 cut(s) | 30 |
| BmiI | GGNNCC | 7 cut(s) | 879, 1126, 1158, 1213, 2613, 2763, 2913 |
| BmrI | ACTGGG | 2 cut(s) | 973, 1207 |
| BmsI | GCATC | 1 cut(s) | 944 |
| BmuI | ACTGGG | 2 cut(s) | 973, 1207 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1373 |
| BpmI | CTGGAG | 2 cut(s) | 540, 588 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1548 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1308 |
| BpuEI | CTTGAG | 1 cut(s) | 1241 |
| BsaJI | CCNNGG | 3 cut(s) | 57, 1128, 1161 |
| BsaWI | WCCGGW | 2 cut(s) | 3100, 3121 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 28, 2975, 3005 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 30, 31, 32, 1297, 2608, 2758, 3121 |
| Bse118I | RCCGGY | 3 cut(s) | 874, 1432, 3121 |
| Bse1I | ACTGG | 2 cut(s) | 968, 1202 |
| Bse3DI | GCAATG | 1 cut(s) | 100 |
| BseDI | CCNNGG | 3 cut(s) | 57, 1128, 1161 |
| BseGI | GGATG | 4 cut(s) | 118, 1324, 2363, 2476 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 30, 31, 32, 1297, 2608, 2758, 3121 |
| BseMI | GCAATG | 1 cut(s) | 100 |
| BseNI | ACTGG | 2 cut(s) | 968, 1202 |
| BseXI | GCAGC | 2 cut(s) | 80, 1188 |
| BseYI | CCCAGC | 1 cut(s) | 1029 |
| Bsh1236I | CGCG | 1 cut(s) | 1142 |
| BshFI | GGCC | 3 cut(s) | 46, 56, 1262 |
| BshNI | GGYRCC | 2 cut(s) | 1124, 1156 |
| BshTI | ACCGGT | 1 cut(s) | 3121 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1257 |
| BsiHKCI | CYCGRG | 1 cut(s) | 30 |
| BsiSI | CCGG | 4 cut(s) | 875, 1433, 3101, 3122 |
| BslFI | GGGAC | 3 cut(s) | 673, 2335, 2479 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 30, 31, 32, 1297, 2608, 2758, 3121 |
| BsmFI | GGGAC | 3 cut(s) | 673, 2335, 2479 |
| BsmI | GAATGC | 1 cut(s) | 1179 |
| BsnI | GGCC | 3 cut(s) | 46, 56, 1262 |
| BsoBI | CYCGRG | 1 cut(s) | 30 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1257 |
| Bsp143I | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1308 |
| BspANI | GGCC | 3 cut(s) | 46, 56, 1262 |
| BspFNI | CGCG | 1 cut(s) | 1142 |
| BspLI | GGNNCC | 7 cut(s) | 879, 1126, 1158, 1213, 2613, 2763, 2913 |
| BspMAI | CTGCAG | 1 cut(s) | 1178 |
| BspT107I | GGYRCC | 2 cut(s) | 1124, 1156 |
| BsrBI | CCGCTC | 1 cut(s) | 1316 |
| BsrDI | GCAATG | 1 cut(s) | 100 |
| BsrFI | RCCGGY | 3 cut(s) | 874, 1432, 3121 |
| BsrI | ACTGG | 2 cut(s) | 968, 1202 |
| BssAI | RCCGGY | 3 cut(s) | 874, 1432, 3121 |
| BssECI | CCNNGG | 3 cut(s) | 57, 1128, 1161 |
| BssMI | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| BssNAI | GTATAC | 1 cut(s) | 2035 |
| BssT1I | CCWWGG | 2 cut(s) | 1128, 1161 |
| Bst1107I | GTATAC | 1 cut(s) | 2035 |
| Bst4CI | ACNGT | 5 cut(s) | 198, 1061, 1079, 1115, 1398 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstC8I | GCNNGC | 4 cut(s) | 164, 1036, 1314, 1434 |
| BstDEI | CTNAG | 2 cut(s) | 1308, 1548 |
| BstDSI | CCRYGG | 1 cut(s) | 57 |
| BstF5I | GGATG | 4 cut(s) | 118, 1324, 2363, 2476 |
| BstFNI | CGCG | 1 cut(s) | 1142 |
| BstH2I | RGCGCY | 1 cut(s) | 1011 |
| BstHHI | GCGC | 1 cut(s) | 1010 |
| BstKTI | GATC | 4 cut(s) | 118, 921, 1023, 1050 |
| BstMBI | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| BstNSI | RCATGY | 1 cut(s) | 1029 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1373 |
| BstSFI | CTRYAG | 3 cut(s) | 157, 949, 1174 |
| BstSNI | TACGTA | 1 cut(s) | 2032 |
| BstUI | CGCG | 1 cut(s) | 1142 |
| BstV1I | GCAGC | 2 cut(s) | 80, 1188 |
| BstZ17I | GTATAC | 1 cut(s) | 2035 |
| BsuRI | GGCC | 3 cut(s) | 46, 56, 1262 |
| BtgI | CCRYGG | 1 cut(s) | 57 |
| BtgZI | GCGATG | 9 cut(s) | 210, 258, 306, 354, 501, 822, 2643, 2793, 2943 |
| BtsCI | GGATG | 4 cut(s) | 118, 1324, 2363, 2476 |
| Cac8I | GCNNGC | 4 cut(s) | 164, 1036, 1314, 1434 |
| CfoI | GCGC | 1 cut(s) | 1010 |
| Cfr10I | RCCGGY | 3 cut(s) | 874, 1432, 3121 |
| CseI | GACGC | 1 cut(s) | 1078 |
| CspAI | ACCGGT | 1 cut(s) | 3121 |
| CviAII | CATG | 3 cut(s) | 1026, 1051, 1153 |
| DdeI | CTNAG | 2 cut(s) | 1308, 1548 |
| DpnI | GATC | 4 cut(s) | 117, 920, 1022, 1049 |
| DpnII | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| EaeI | YGGCCR | 2 cut(s) | 44, 54 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| EciI | GGCGGA | 3 cut(s) | 816, 1524, 1602 |
| Eco105I | TACGTA | 1 cut(s) | 2032 |
| Eco130I | CCWWGG | 2 cut(s) | 1128, 1161 |
| Eco32I | GATATC | 1 cut(s) | 971 |
| Eco57I | CTGAAG | 1 cut(s) | 1241 |
| Eco88I | CYCGRG | 1 cut(s) | 30 |
| EcoRV | GATATC | 1 cut(s) | 971 |
| EcoT14I | CCWWGG | 2 cut(s) | 1128, 1161 |
| ErhI | CCWWGG | 2 cut(s) | 1128, 1161 |
| FaeI | CATG | 3 cut(s) | 1029, 1054, 1156 |
| FaqI | GGGAC | 3 cut(s) | 673, 2335, 2479 |
| FatI | CATG | 3 cut(s) | 1025, 1050, 1152 |
| FauI | CCCGC | 1 cut(s) | 1321 |
| FbaI | TGATCA | 1 cut(s) | 115 |
| FblI | GTMKAC | 8 cut(s) | 156, 300, 348, 489, 942, 1377, 2034, 3081 |
| Fnu4HI | GCNGC | 7 cut(s) | 47, 69, 830, 1177, 1352, 1424, 1454 |
| FokI | GGATG | 4 cut(s) | 105, 1311, 2350, 2463 |
| Fsp4HI | GCNGC | 7 cut(s) | 47, 69, 830, 1177, 1352, 1424, 1454 |
| GlaI | GCGC | 1 cut(s) | 1009 |
| GluI | GCNGC | 7 cut(s) | 47, 69, 830, 1177, 1352, 1424, 1454 |
| GsaI | CCCAGC | 1 cut(s) | 1033 |
| GsuI | CTGGAG | 2 cut(s) | 540, 588 |
| HaeII | RGCGCY | 1 cut(s) | 1011 |
| HaeIII | GGCC | 3 cut(s) | 46, 56, 1262 |
| HapII | CCGG | 4 cut(s) | 875, 1433, 3101, 3122 |
| HgaI | GACGC | 1 cut(s) | 1078 |
| HhaI | GCGC | 1 cut(s) | 1010 |
| Hin1II | CATG | 3 cut(s) | 1029, 1054, 1156 |
| Hin6I | GCGC | 1 cut(s) | 1008 |
| HinP1I | GCGC | 1 cut(s) | 1008 |
| HpaII | CCGG | 4 cut(s) | 875, 1433, 3101, 3122 |
| Hpy188I | TCNGA | 4 cut(s) | 935, 1587, 1626, 1821 |
| Hpy188III | TCNNGA | 2 cut(s) | 986, 1001 |
| Hpy99I | CGWCG | 3 cut(s) | 935, 1094, 1402 |
| HpyCH4III | ACNGT | 5 cut(s) | 198, 1061, 1079, 1115, 1398 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 1176 |
| HpyF3I | CTNAG | 2 cut(s) | 1308, 1548 |
| Hsp92II | CATG | 3 cut(s) | 1029, 1054, 1156 |
| HspAI | GCGC | 1 cut(s) | 1008 |
| KroI | GCCGGC | 1 cut(s) | 1432 |
| KroNI | GCCGGC | 1 cut(s) | 1434 |
| Ksp22I | TGATCA | 1 cut(s) | 115 |
| Kzo9I | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| LmnI | GCTCC | 5 cut(s) | 883, 1152, 1211, 1285, 1321 |
| Lsp1109I | GCAGC | 2 cut(s) | 80, 1188 |
| LweI | GCATC | 1 cut(s) | 944 |
| MalI | GATC | 4 cut(s) | 117, 920, 1022, 1049 |
| MbiI | CCGCTC | 1 cut(s) | 1316 |
| MboI | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| MboII | GAAGA | 2 cut(s) | 126, 1112 |
| MfeI | CAATTG | 1 cut(s) | 1240 |
| MhlI | GDGCHC | 1 cut(s) | 1257 |
| MluCI | AATT | 3 cut(s) | 425, 1082, 1240 |
| MmeI | TCCRAC | 2 cut(s) | 913, 1208 |
| MroNI | GCCGGC | 1 cut(s) | 1432 |
| MspI | CCGG | 4 cut(s) | 875, 1433, 3101, 3122 |
| MunI | CAATTG | 1 cut(s) | 1240 |
| Mva1269I | GAATGC | 1 cut(s) | 1179 |
| MvnI | CGCG | 1 cut(s) | 1142 |
| NaeI | GCCGGC | 1 cut(s) | 1434 |
| NdeII | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| NgoMIV | GCCGGC | 1 cut(s) | 1432 |
| NlaIII | CATG | 3 cut(s) | 1029, 1054, 1156 |
| NlaIV | GGNNCC | 7 cut(s) | 879, 1126, 1158, 1213, 2613, 2763, 2913 |
| NspI | RCATGY | 1 cut(s) | 1029 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 927 |
| PctI | GAATGC | 1 cut(s) | 1179 |
| PdiI | GCCGGC | 1 cut(s) | 1434 |
| PinAI | ACCGGT | 1 cut(s) | 3121 |
| PkrI | GCNGC | 7 cut(s) | 48, 70, 831, 1178, 1353, 1425, 1455 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1373 |
| PspFI | CCCAGC | 1 cut(s) | 1029 |
| PspN4I | GGNNCC | 7 cut(s) | 879, 1126, 1158, 1213, 2613, 2763, 2913 |
| PstI | CTGCAG | 1 cut(s) | 1178 |
| SatI | GCNGC | 7 cut(s) | 47, 69, 830, 1177, 1352, 1424, 1454 |
| Sau3AI | GATC | 4 cut(s) | 115, 918, 1020, 1047 |
| ScaI | AGTACT | 3 cut(s) | 1865, 2000, 2135 |
| SduI | GDGCHC | 1 cut(s) | 1257 |
| SfaNI | GCATC | 1 cut(s) | 944 |
| SfcI | CTRYAG | 3 cut(s) | 157, 949, 1174 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3121 |
| SmlI | CTYRAG | 1 cut(s) | 1256 |
| SmoI | CTYRAG | 1 cut(s) | 1256 |
| SnaBI | TACGTA | 1 cut(s) | 2032 |
| Sse9I | AATT | 3 cut(s) | 425, 1082, 1240 |
| StyI | CCWWGG | 2 cut(s) | 1128, 1161 |
| TaaI | ACNGT | 5 cut(s) | 198, 1061, 1079, 1115, 1398 |
| TaqI | TCGA | 4 cut(s) | 11, 89, 1002, 1098 |
| TasI | AATT | 3 cut(s) | 425, 1082, 1240 |
| TauI | GCSGC | 5 cut(s) | 49, 832, 1354, 1426, 1456 |
| TseI | GCWGC | 2 cut(s) | 68, 1176 |
| TspGWI | ACGGA | 2 cut(s) | 423, 870 |
| XapI | RAATTY | 1 cut(s) | 1082 |
| XceI | RCATGY | 1 cut(s) | 1029 |
| XmiI | GTMKAC | 8 cut(s) | 156, 300, 348, 489, 942, 1377, 2034, 3081 |
| ZrmI | AGTACT | 3 cut(s) | 1865, 2000, 2135 |