Rmu_sc0025789.1_g000001

Regulator of Ty1 transposition protein 107 BRCT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025789.1
OG0007475
Physical Location & Seq
Reverse (-)
1 .. 3759
3759 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025789.1_g000001.1.cds

Sequence Viewer

Length: 2675 bp
atgatgatacaattaagagttcaaggtaatagttttgaagaaggagaagacttgcttcagttgccttgtgatttggcaggactaagctatgctgattctcaagaacctggagagttatcacaggctaatgctctgaattttgtggataaatttctccaagataatgctgaggagtttgataaagaaggtgattgcagaaagagttctaagaaaaattcaaaagttgtctcaagtgcaaaagggccacaaacattggcgaagaaagtcaatgatataagcttagttacagatgcaggcatttatgagtgggatgataatcgtgaggatgaaggaggtggtgaattgttttgccgaaaaaggacagacttctttagcggtggaagtcatgggtcaaaatctgttccccaacctcggaaggcgaaaaggaacagaacggatgagctgaatgataacaaacggaaattgcagggaaagaacaagaaaattggtgtagttcattctgattccaaattgttggtgctggattcaaaagcccatgagaagatggaaagtgaagatgaaatgagacacaaacggaacctcactagtgagtttgaccaacagtttaatatctgctccactagaggacagttggatgttcatgataagacccaggtgcctgaaatgctaaatgtaggttttgatactcaaatagctgctgaagctatggaagccttattcaacggtgaaggaatttccaattgtgaggccaatgatgctattcacagaaactcacctgaaggttcaatgggagaaaagacgaagaatataagtgtgaagaaaccccattctcgaaaaagagcacgcctttctgatgcaggggttgattctcgagaatcccaacgagccaagaaaacaaggagggttgatccctactcaagtaaagattccttgacagcacctccggaaaattctaagaatgccaggaagccgcatgaaactgcattggtgataacaaaatcaaagaagcccaagtcacatgctgcaaaacacgatagtatcagtcagaggagaatcttggagagggtaccttctgtttccattgaccaaagaacagaaagatccaagaaacagaatttacaacatggtggtacctctacacccattgcacgtcgaactaggcaatctatgttgatgaatcagttcaatatagcagataatgcatccactgattgtggagaggagtctaaccatgtgacggaggatgcttctggtgttcatatggctgaagagttgagtgcaaaatcttcaaaacagggtcccaatgaagctagcagggttggaaagacgaagcaaaaccaatacgagcatgcagatgttaatttcagagctgttggtaatggggtcaaattggatggattaagctttcctagaggacgaagatctcagcgaaatttgtccggcaaggtttatgggcctgatgacttagatgatccatctgagccatctattcagccagagaaatttggaaaatgtggcactaggcacaaaaggccacaggatgctagaggcactactgttgataaaacgtttaaaagggaaacacgatcttccacatgtggatctcttggaaataagaatttggaaggaaattttgcacagaaaaatttagacaaaggaggttctggtggtgctccccttcattgtaattcttctcataaaactgtggagaagactgttagggcccctgacaggttgagtgatgcaagtgcctcttctgttagaatgagggataaatccccacgtcagaaagctgtctgtcaacaatctgatgcagcatgtactactccggttaaccacaataaggtggctgtcaatgatgtatctcctgtttgtatgggtaatgaatatttcagacagtcatgcaagaggagcctatcaaggccgagccttttgaaagaactgcgtgacttgagtccacttgagcctgaaccaacttcaacctcaaaggatttaaggaggaggagagacatgactgatgttcgagtgctatatagtcaccacttagatgaggacataattaagcagcagaagaaggttttgggccgactaggagtttctgttgcatcctcgatgacagatgccacacacttcatagcagatcactttgtgcgaacaaggaatatgttagaagctatagcttctggaaaaccagtggtgacacatttatggctagagagctgtggacaagctaattgtttcattgatgagaaaaattacatactaagggatactaaaaaggagaagcaatttggctttagcatgccagcttcgttggcatgtgcctgccaacatccacttttaaaggatcggaaagtctttatcaccccaaatacaaagcctggtaaagaaataatttcgaggctggtcaaagcagtcaatggccaggcagtggagagaattggcagatctgctttgaaggctgatcagattccagatgatctgttggttctatcttgcgaagaagattatgaaatttgtgtacctttacttgaaaaaggagctgcagtttacagctcagagctggttttgaatgggattgttactcagaagctggaatttgaaagacatcgcattttcactgatcaagttaagaaaacccggtctaccatatggttgaggaaagatggcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000414 GO:0000416 GO:0000726 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010212 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030330 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034708 GO:0034968 GO:0035065 GO:0035066 GO:0035097 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043414 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045191 GO:0045830 GO:0045893 GO:0045911 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0072331 GO:0080090 GO:0090304 GO:1901360 GO:1901564 GO:1901983 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903320 GO:1903322 GO:1903506 GO:1903508 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000142 GO:2000144 GO:2000756 GO:2000758 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

891

Amino Acids

99.19

Weight (kDa)

9.17

Isoelectric Point (pI)

47.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1066, 1130
AccB1I GGYRCC 3 cut(s) 655, 1066, 1130
AccB7I CCANNNNNTGG 1 cut(s) 2431
AccI GTMKAC 1 cut(s) 2645
AccIII TCCGGA 1 cut(s) 943
AciI CCGC 2 cut(s) 375, 971
AclI AACGTT 1 cut(s) 1568
AclWI GGATC 5 cut(s) 902, 1095, 1466, 1609, 2355
AcoI YGGCCR 1 cut(s) 2422
AcuI CTGAAG 4 cut(s) 41, 720, 798, 1287
AdeI CACNNNGTG 1 cut(s) 2149
AfaI GTAC 4 cut(s) 1068, 1132, 1822, 2523
AfiI CCNNNNNNNGG 5 cut(s) 411, 1237, 1731, 1843, 2431
AflIII ACRYGT 1 cut(s) 1595
AhlI ACTAGT 1 cut(s) 584
AjiI CACGTC 2 cut(s) 1151, 1784
AjnI CCWGG 5 cut(s) 106, 651, 962, 2380, 2424
AjuI GAANNNNNNNTTGG 2 cut(s) 2063, 2095
Alw21I GWGCWC 2 cut(s) 844, 1675
Alw26I GTCTC 3 cut(s) 232, 559, 2001
AlwI GGATC 5 cut(s) 902, 1095, 1466, 1609, 2355
AlwNI CAGNNNCTG 1 cut(s) 2593
Ama87I CYCGRG 1 cut(s) 870
Aor13HI TCCGGA 1 cut(s) 943
AoxI GGCC 8 cut(s) 242, 747, 1454, 1532, 1722, 1922, 2083, 2422
ApaI GGGCCC 1 cut(s) 1726
ApeKI GCWGC 5 cut(s) 695, 1022, 1814, 2065, 2543
Asp700I GAANNNNTTC 2 cut(s) 202, 1181
Asp718I GGTACC 2 cut(s) 1066, 1130
AspS9I GGNCC 6 cut(s) 242, 1298, 1454, 1722, 1723, 2083
AsuC2I CCSGG 1 cut(s) 2641
AsuHPI GGTGA 8 cut(s) 200, 350, 737, 765, 1000, 2030, 2209, 2356
AsuNHI GCTAGC 1 cut(s) 1310
AvaI CYCGRG 1 cut(s) 870
AvaII GGWCC 1 cut(s) 1298
BaeGI GKGCMC 1 cut(s) 1726
BaeI ACNNNNGTAYC 2 cut(s) 1021, 1054
BalI TGGCCA 1 cut(s) 2424
BanI GGYRCC 3 cut(s) 655, 1066, 1130
BanII GRGCYC 1 cut(s) 1726
BbsI GAAGAC 2 cut(s) 54, 1718
Bbv12I GWGCWC 2 cut(s) 844, 1675
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 5 cut(s) 682, 1009, 1826, 2077, 2530
BccI CCATC 5 cut(s) 538, 1388, 1483, 1492, 2660
BciT130I CCWGG 5 cut(s) 108, 653, 964, 2382, 2426
BciVI GTATCC 1 cut(s) 2263
BclI TGATCA 2 cut(s) 2464, 2623
BcnI CCSGG 1 cut(s) 2641
BcoDI GTCTC 3 cut(s) 232, 559, 2001
BcuI ACTAGT 1 cut(s) 584
BfaI CTAG 9 cut(s) 585, 621, 1158, 1311, 1410, 1521, 1545, 2090, 2213
BfmI CTRYAG 2 cut(s) 2175, 2544
BfuI GTATCC 1 cut(s) 2263
BglII AGATCT 2 cut(s) 1421, 2447
BisI GCNGC 6 cut(s) 696, 971, 1023, 1815, 2066, 2544
BlsI GCNGC 6 cut(s) 697, 972, 1024, 1816, 2067, 2545
Bme1390I CCNGG 6 cut(s) 108, 653, 964, 2382, 2426, 2641
Bme18I GGWCC 1 cut(s) 1298
BmeT110I CYCGRG 1 cut(s) 870
BmgBI CACGTC 2 cut(s) 1151, 1784
BmgT120I GGNCC 6 cut(s) 242, 1298, 1454, 1722, 1723, 2083
BmiI GGNNCC 9 cut(s) 578, 657, 1068, 1132, 1299, 1300, 1724, 1725, 1913
BmrFI CCNGG 6 cut(s) 108, 653, 964, 2382, 2426, 2641
BmtI GCTAGC 1 cut(s) 1314
BoxI GACNNNNGTC 1 cut(s) 1953
BpiI GAAGAC 2 cut(s) 54, 1718
BpmI CTGGAG 1 cut(s) 129
Bpu10I CCTNAGC 1 cut(s) 168
BpuEI CTTGAG 5 cut(s) 84, 214, 901, 1972, 1982
BpuMI CCSGG 1 cut(s) 2641
BsaBI GATNNNNATC 1 cut(s) 315
BsaJI CCNNGG 2 cut(s) 410, 651
BsaWI WCCGGW 2 cut(s) 943, 1828
BsaXI ACNNNNNCTCC 6 cut(s) 925, 955, 2085, 2115, 2532, 2562
Bsc4I CCNNNNNNNGG 5 cut(s) 411, 1237, 1731, 1843, 2431
Bse1I ACTGG 1 cut(s) 2192
Bse3DI GCAATG 1 cut(s) 1143
Bse8I GATNNNNATC 1 cut(s) 315
BseAI TCCGGA 1 cut(s) 943
BseBI CCWGG 5 cut(s) 108, 653, 964, 2382, 2426
BseDI CCNNGG 2 cut(s) 410, 651
BseJI GATNNNNATC 1 cut(s) 315
BseLI CCNNNNNNNGG 5 cut(s) 411, 1237, 1731, 1843, 2431
BseMI GCAATG 1 cut(s) 1143
BseMII CTCAG 5 cut(s) 159, 1439, 1470, 2571, 2600
BseNI ACTGG 1 cut(s) 2192
BseRI GAGGAG 6 cut(s) 185, 1063, 1235, 1924, 2014, 2017
BseSI GKGCMC 1 cut(s) 1726
BseXI GCAGC 5 cut(s) 682, 1009, 1826, 2077, 2530
BshFI GGCC 8 cut(s) 244, 749, 1456, 1534, 1724, 1924, 2085, 2424
BshNI GGYRCC 3 cut(s) 655, 1066, 1130
BsiHKAI GWGCWC 2 cut(s) 844, 1675
BsiHKCI CYCGRG 1 cut(s) 870
BsiSI CCGG 4 cut(s) 944, 1440, 1829, 2641
BslFI GGGAC 1 cut(s) 1284
BslI CCNNNNNNNGG 5 cut(s) 411, 1237, 1731, 1843, 2431
BsmAI GTCTC 3 cut(s) 232, 559, 2001
BsmFI GGGAC 1 cut(s) 1284
BsmI GAATGC 1 cut(s) 964
BsnI GGCC 8 cut(s) 244, 749, 1456, 1534, 1724, 1924, 2085, 2424
BsoBI CYCGRG 1 cut(s) 870
Bsp120I GGGCCC 1 cut(s) 1722
Bsp1286I GDGCHC 3 cut(s) 844, 1675, 1726
Bsp13I TCCGGA 1 cut(s) 943
BspACI CCGC 2 cut(s) 375, 971
BspANI GGCC 8 cut(s) 244, 749, 1456, 1534, 1724, 1924, 2085, 2424
BspCNI CTCAG 5 cut(s) 160, 1438, 1471, 2570, 2599
BspEI TCCGGA 1 cut(s) 943
BspHI TCATGA 1 cut(s) 640
BspLI GGNNCC 9 cut(s) 578, 657, 1068, 1132, 1299, 1300, 1724, 1725, 1913
BspMAI CTGCAG 1 cut(s) 2548
BspOI GCTAGC 1 cut(s) 1314
BspPI GGATC 5 cut(s) 902, 1095, 1466, 1609, 2355
BspT107I GGYRCC 3 cut(s) 655, 1066, 1130
BsrDI GCAATG 1 cut(s) 1143
BsrI ACTGG 1 cut(s) 2192
BssECI CCNNGG 2 cut(s) 410, 651
Bst2UI CCWGG 5 cut(s) 108, 653, 964, 2382, 2426
Bst4CI ACNGT 7 cut(s) 603, 630, 725, 1558, 1705, 1717, 1899
Bst6I CTCTTC 2 cut(s) 1263, 1759
BstAPI GCANNNNNTGC 1 cut(s) 1199
BstC8I GCNNGC 7 cut(s) 295, 844, 1312, 1350, 2303, 2307, 2326
BstMAI GTCTC 3 cut(s) 232, 559, 2001
BstNI CCWGG 5 cut(s) 108, 653, 964, 2382, 2426
BstNSI RCATGY 6 cut(s) 1022, 1352, 1599, 1821, 2305, 2322
BstPAI GACNNNNGTC 1 cut(s) 1953
BstSCI CCNGG 6 cut(s) 106, 651, 962, 2380, 2424, 2639
BstSFI CTRYAG 2 cut(s) 2175, 2544
BstSLI GKGCMC 1 cut(s) 1726
BstV1I GCAGC 5 cut(s) 682, 1009, 1826, 2077, 2530
BstV2I GAAGAC 2 cut(s) 54, 1718
BstX2I RGATCY 4 cut(s) 1100, 1421, 1601, 2447
BstXI CCANNNNNNTGG 1 cut(s) 514
BstYI RGATCY 4 cut(s) 1100, 1421, 1601, 2447
BsuI GTATCC 1 cut(s) 2263
BsuRI GGCC 8 cut(s) 244, 749, 1456, 1534, 1724, 1924, 2085, 2424
BtgZI GCGATG 1 cut(s) 2594
BtrI CACGTC 2 cut(s) 1151, 1784
BtsI GCAGTG 1 cut(s) 2436
BtsIMutI CAGTG 4 cut(s) 1206, 2199, 2436, 2619
Cac8I GCNNGC 7 cut(s) 295, 844, 1312, 1350, 2303, 2307, 2326
CaiI CAGNNNCTG 1 cut(s) 2593
CciI TCATGA 1 cut(s) 640
Cfr13I GGNCC 6 cut(s) 242, 1298, 1454, 1722, 1723, 2083
Csp6I GTAC 4 cut(s) 1067, 1131, 1821, 2522
CspCI CAANNNNNGTGG 2 cut(s) 234, 269
CviQI GTAC 4 cut(s) 1067, 1131, 1821, 2522
DraI TTTAAA 2 cut(s) 1573, 2343
DraIII CACNNNGTG 1 cut(s) 2149
EaeI YGGCCR 1 cut(s) 2422
Eam1104I CTCTTC 2 cut(s) 1263, 1759
EarI CTCTTC 2 cut(s) 1263, 1759
Eco24I GRGCYC 1 cut(s) 1726
Eco47I GGWCC 1 cut(s) 1298
Eco57I CTGAAG 4 cut(s) 41, 720, 798, 1287
Eco88I CYCGRG 1 cut(s) 870
EcoO109I RGGNCCY 3 cut(s) 1298, 1722, 1723
EcoRII CCWGG 5 cut(s) 106, 651, 962, 2380, 2424
EcoT22I ATGCAT 1 cut(s) 1204
EcoT38I GRGCYC 1 cut(s) 1726
FalI AAGNNNNNCTT 4 cut(s) 39, 71, 1738, 1770
FaqI GGGAC 1 cut(s) 1284
FauNDI CATATG 2 cut(s) 1260, 2651
FbaI TGATCA 2 cut(s) 2464, 2623
FblI GTMKAC 1 cut(s) 2645
Fnu4HI GCNGC 6 cut(s) 696, 971, 1023, 1815, 2066, 2544
FriOI GRGCYC 1 cut(s) 1726
Fsp4HI GCNGC 6 cut(s) 696, 971, 1023, 1815, 2066, 2544
FspBI CTAG 9 cut(s) 585, 621, 1158, 1311, 1410, 1521, 1545, 2090, 2213
GluI GCNGC 6 cut(s) 696, 971, 1023, 1815, 2066, 2544
GsuI CTGGAG 1 cut(s) 129
HaeIII GGCC 8 cut(s) 244, 749, 1456, 1534, 1724, 1924, 2085, 2424
HapII CCGG 4 cut(s) 944, 1440, 1829, 2641
HincII GTYRAC 2 cut(s) 1802, 1834
HindII GTYRAC 2 cut(s) 1802, 1834
HindIII AAGCTT 2 cut(s) 277, 1402
HpaI GTTAAC 1 cut(s) 1834
HpaII CCGG 4 cut(s) 944, 1440, 1829, 2641
HphI GGTGA 8 cut(s) 200, 350, 737, 765, 1000, 2030, 2209, 2356
Hpy166II GTNNAC 7 cut(s) 1802, 1834, 1958, 2225, 2522, 2551, 2646
Hpy188III TCNNGA 9 cut(s) 101, 320, 641, 831, 870, 872, 944, 2184, 2474
Hpy8I GTNNAC 7 cut(s) 1802, 1834, 1958, 2225, 2522, 2551, 2646
Hpy99I CGWCG 1 cut(s) 1155
HpyCH4III ACNGT 7 cut(s) 603, 630, 725, 1558, 1705, 1717, 1899
HpyCH4IV ACGT 3 cut(s) 1150, 1568, 1783
HpySE526I ACGT 3 cut(s) 1150, 1568, 1783
KflI GGGWCCC 1 cut(s) 1298
Kpn2I TCCGGA 1 cut(s) 943
KpnI GGTACC 2 cut(s) 1070, 1134
Ksp22I TGATCA 2 cut(s) 2464, 2623
KspAI GTTAAC 1 cut(s) 1834
LmnI GCTCC 4 cut(s) 620, 1678, 1911, 2540
Lsp1109I GCAGC 5 cut(s) 682, 1009, 1826, 2077, 2530
MaeI CTAG 9 cut(s) 585, 621, 1158, 1311, 1410, 1521, 1545, 2090, 2213
MaeII ACGT 3 cut(s) 1150, 1568, 1783
MaeIII GTNAC 7 cut(s) 283, 1014, 1234, 1946, 2036, 2197, 2581
MfeI CAATTG 1 cut(s) 739
MflI RGATCY 4 cut(s) 1100, 1421, 1601, 2447
MhlI GDGCHC 3 cut(s) 844, 1675, 1726
MlsI TGGCCA 1 cut(s) 2424
MluNI TGGCCA 1 cut(s) 2424
MlyI GAGTC 2 cut(s) 1232, 1963
MmeI TCCRAC 2 cut(s) 612, 1300
Mox20I TGGCCA 1 cut(s) 2424
Mph1103I ATGCAT 1 cut(s) 1204
MroI TCCGGA 1 cut(s) 943
MroXI GAANNNNTTC 2 cut(s) 202, 1181
MscI TGGCCA 1 cut(s) 2424
MslI CAYNNNNRTG 3 cut(s) 1353, 2046, 2206
Msp20I TGGCCA 1 cut(s) 2424
MspI CCGG 4 cut(s) 944, 1440, 1829, 2641
MspR9I CCNGG 6 cut(s) 108, 653, 964, 2382, 2426, 2641
MunI CAATTG 1 cut(s) 739
Mva1269I GAATGC 1 cut(s) 964
MvaI CCWGG 5 cut(s) 108, 653, 964, 2382, 2426
NciI CCSGG 1 cut(s) 2641
NdeI CATATG 2 cut(s) 1260, 2651
NheI GCTAGC 1 cut(s) 1310
NlaIV GGNNCC 9 cut(s) 578, 657, 1068, 1132, 1299, 1300, 1724, 1725, 1913
NmeAIII GCCGAG 1 cut(s) 1950
NmuCI GTSAC 5 cut(s) 1014, 1234, 1946, 2036, 2197
NsiI ATGCAT 1 cut(s) 1204
NspI RCATGY 6 cut(s) 1022, 1352, 1599, 1821, 2305, 2322
PaeI GCATGC 2 cut(s) 1352, 2305
PaeR7I CTCGAG 1 cut(s) 870
PagI TCATGA 1 cut(s) 640
PciI ACATGT 1 cut(s) 1595
PctI GAATGC 1 cut(s) 964
PdmI GAANNNNTTC 2 cut(s) 202, 1181
PfeI GAWTC 9 cut(s) 95, 503, 524, 866, 875, 926, 1053, 1177, 2470
PflMI CCANNNNNTGG 1 cut(s) 2431
PkrI GCNGC 6 cut(s) 697, 972, 1024, 1816, 2067, 2545
PleI GAGTC 2 cut(s) 1231, 1962
PpsI GAGTC 2 cut(s) 1231, 1962
PpuMI RGGWCCY 1 cut(s) 1298
PscI ACATGT 1 cut(s) 1595
PshAI GACNNNNGTC 1 cut(s) 1953
Psp1406I AACGTT 1 cut(s) 1568
Psp5II RGGWCCY 1 cut(s) 1298
Psp6I CCWGG 5 cut(s) 106, 651, 962, 2380, 2424
PspGI CCWGG 5 cut(s) 106, 651, 962, 2380, 2424
PspN4I GGNNCC 9 cut(s) 578, 657, 1068, 1132, 1299, 1300, 1724, 1725, 1913
PspOMI GGGCCC 1 cut(s) 1722
PspPI GGNCC 6 cut(s) 242, 1298, 1454, 1722, 1723, 2083
PspPPI RGGWCCY 1 cut(s) 1298
PstI CTGCAG 1 cut(s) 2548
PstNI CAGNNNCTG 1 cut(s) 2593
PsuI RGATCY 4 cut(s) 1100, 1421, 1601, 2447
RsaI GTAC 4 cut(s) 1068, 1132, 1822, 2523
RsaNI GTAC 4 cut(s) 1067, 1131, 1821, 2522
RseI CAYNNNNRTG 3 cut(s) 1353, 2046, 2206
SatI GCNGC 6 cut(s) 696, 971, 1023, 1815, 2066, 2544
Sau96I GGNCC 6 cut(s) 242, 1298, 1454, 1722, 1723, 2083
SchI GAGTC 2 cut(s) 1232, 1963
ScrFI CCNGG 6 cut(s) 108, 653, 964, 2382, 2426, 2641
SduI GDGCHC 3 cut(s) 844, 1675, 1726
SfcI CTRYAG 2 cut(s) 2175, 2544
Sfr274I CTCGAG 1 cut(s) 870
SinI GGWCC 1 cut(s) 1298
SlaI CTCGAG 1 cut(s) 870
SmiMI CAYNNNNRTG 3 cut(s) 1353, 2046, 2206
SmlI CTYRAG 6 cut(s) 99, 229, 870, 916, 1951, 1961
SmoI CTYRAG 6 cut(s) 99, 229, 870, 916, 1951, 1961
SpeI ACTAGT 1 cut(s) 584
SphI GCATGC 2 cut(s) 1352, 2305
SsiI CCGC 2 cut(s) 375, 971
SspI AATATT 1 cut(s) 1889
SspMI CTAG 9 cut(s) 585, 621, 1158, 1311, 1410, 1521, 1545, 2090, 2213
StyD4I CCNGG 6 cut(s) 106, 651, 962, 2380, 2424, 2639
TaaI ACNGT 7 cut(s) 603, 630, 725, 1558, 1705, 1717, 1899
TaiI ACGT 3 cut(s) 1153, 1571, 1786
TaqI TCGA 6 cut(s) 832, 871, 1153, 2023, 2111, 2399
TatI WGTACW 1 cut(s) 1820
TauI GCSGC 1 cut(s) 973
TfiI GAWTC 9 cut(s) 95, 503, 524, 866, 875, 926, 1053, 1177, 2470
TscAI CASTG 4 cut(s) 1213, 2199, 2436, 2626
TseFI GTSAC 5 cut(s) 1014, 1234, 1946, 2036, 2197
TseI GCWGC 5 cut(s) 695, 1022, 1814, 2065, 2543
Tsp45I GTSAC 5 cut(s) 1014, 1234, 1946, 2036, 2197
TspGWI ACGGA 4 cut(s) 449, 472, 589, 1253
TspRI CASTG 4 cut(s) 1213, 2199, 2436, 2626
Van91I CCANNNNNTGG 1 cut(s) 2431
VpaK11BI GGWCC 1 cut(s) 1298
XceI RCATGY 6 cut(s) 1022, 1352, 1599, 1821, 2305, 2322
XhoI CTCGAG 1 cut(s) 870
XmiI GTMKAC 1 cut(s) 2645
XmnI GAANNNNTTC 2 cut(s) 202, 1181
XspI CTAG 9 cut(s) 585, 621, 1158, 1311, 1410, 1521, 1545, 2090, 2213
Zsp2I ATGCAT 1 cut(s) 1204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.