pycom13g21390

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0012345
Physical Location & Seq
Forward (+)
18020205 .. 18024753
4549 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1998 bp
ATGATTCCTGATCAAACAATTAACACGAAAAATTTTAACGAAAAACCTACGGTACTGTTCACTTTAACGAAAAACCACATTTTTACACTAAAAAGTCAATCTTGGTACTATTCACTTTATTATTTATTTTATCCTTATCGGGAGCAGAGAGTCGTTGATTGTTTTCGTTGTTGGAACGACACGGTTTCGGAAGAAGAACAAGAACATCGTCTTTCACCACCACCACCTTCGTCTCCACCACCATCTCCTCCTCGGACATCATATCAATGGGGTACTTTTCAGAGCTTTCGGAAGGCCTATGGAGCTCTGAAGGACTCTACCAAGGTTGGCCTCATCAAGGTCAACAGCGAATTCAAGGATTTGGATATCGCCACAGTGAAGGCAACCAGTCACGTTGAGTGCCCTCCGAAGGAACGTCATATTAGAAAGATTTTCTCTGCGACATCAGTGAATCGTCCACGCGCAGATGTGGCATACTGCATTCACACGTTGGCCAAGAGATTGTCCAAGACACGGAGTTGGATTGTTGCCATAAAGACATTGATAGTTATTCATAGAACATTGAGAGATGGTGATCCTACCTTCAGAGAGGAGCTTCTGAACTATTCGCAGAGAGGACACATTCTCCAAATTTCCTATTTTAAAGATGACTCAAGTCCCCTTGCTTGGGATTGCTCCGCTTGGGTTAGGACATATGCGCTCTTTTTAGAAGAACGGCTGGAGTGTTTCAAAGTTTTGAAATATGACATTGAGGCAGAGCGTTTGACCAAAACATTGCCAGGATCAACGAAGGTCCATAGTAGAACACGAACGCTGAGTGCTGATGCGCTCTTGGAGCAGCTACCTGCACTGCAGCAACTTCTTTTCTGCCTCATGGGTTGCCAGCCCGAGGGAACAGCTTATAACAATTACCTCATACAATATGCCTTGGCTCTGATATTAAAAGAGAGCTTTAAAATATATTGTGCCATCAATGACGGAATTATAAATCTCGTTGACATGTTCTTTGATATGTCAAGACACGACGCAGTTAAAGCCCTCAATATTTACAAAAGAGCTGGTCAACAGGCTGAAGCGCTTGCTGATTTTTACGAATACTGCAAGGGTTTGGATCTTGCTAGAACTTTTCAGTTTCCTACATTGAGACAGCCACCACCATCATTTCTTGCAACAATGGAAGAGTATATAAAGGAAGCGCCACAGTCAGGTTCCATTAACAGAAGACTGGAATACCAGGAGACAGACGAGCAGCCTCAGAGACCTGATGAACCTCCTCCCCCTCCAGAGCCTGAAAAACAAGAAGAAAAAGTTGAGGAGCCACTGGCTAAAACAGAGGAAGAATCCCAACCCAAGGAAGAAGAAGTCGAACCTCCTCCTTTGATATCAACTGAGGACACTGATCTGCTGGGTCTAAGGGAAATAAATCCAAAAGCTGCAGAAATAGAAGAATGCAATGCCCTGGCTCTTGCGATAGTTCCACAGGGGAATGAACAAAAATCTGGAGCAAATTTCAATGATTTTGCTGGGACTTCCGGTTGGGAGCTAGCGCTGGTGACCACACCAAGCAACCATACCAGCCAAGTGCCCCAAGACAGAAAGTTGGCTGGTGGCTTTGATAACCTGTTACTTAATAGTTTGTATGAAGATGAAGGTGCCAGGAGACAGTTACAACTCCAGAATGCAGGGTATGGTTATGGCGCGACGAGCTTGCAAAATCCATTTGAACAAGCAGCACAGCAACCCATACAAGACCCATTTGCAATGTCCAACGGCATAGCACCCCCTACAAACGTGCAGATGGCATTAATGGCACAACAACAAGAACAGCACCAGCAAATCATGCAGCAACAACAGCAAAACATGATGATGGTACCTCACCCATATTATTCTCAATATTCCCAACCAATGCAACCCGCAGGCTCTGCAAACCCGTTTGGAGATCCATTCAGCATCCCTCCTAGTACAACGCCAAACCAGGGAAACCAAAACCTAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

666

Amino Acids

75.63

Weight (kDa)

5.35

Isoelectric Point (pI)

60.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 120 - 398 1.5e-91 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012345)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25940 AT5G57200
fragaria_vesca FvH4_4g07320
malus_domestica MD13G1242200.v1.1 MD16G1249100.v1.1
prunus_persica Prupe.1G075800_v2.0.a1 Prupe.1G076000_v2.0.a1
pyrus_communis pycom13g21390 pycom16g20850
rosa_chinensis RchiOBHm_Chr4g0399681
rosa_laevigata RLG00000009247
rosa_multiflora Rmu_co8405013.1_g000001
rosa_roxburghii Rroxscaffold_5G00344590
rosa_rugosa Rorug04G0018100
rosa_samantha Rh4AG095900 Rh4BG093400 Rh4CG104500 Rh4DG088500
rosa_wichuraiana Rw4G007900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 903, 986
Acc36I ACCTGC 1 cut(s) 853
Acc65I GGTACC 1 cut(s) 1870
AccB1I GGYRCC 2 cut(s) 1652, 1870
AccII CGCG 2 cut(s) 462, 1700
AciI CCGC 2 cut(s) 678, 1914
AclWI GGATC 4 cut(s) 569, 790, 1119, 1934
AcoI YGGCCR 1 cut(s) 492
AcsI RAATTY 4 cut(s) 31, 350, 630, 1507
AcuI CTGAAG 3 cut(s) 329, 568, 1092
AfaI GTAC 5 cut(s) 54, 107, 274, 1872, 1963
AfeI AGCGCT 2 cut(s) 1077, 1548
AfiI CCNNNNNNNGG 9 cut(s) 337, 409, 513, 666, 667, 889, 1205, 1351, 1976
AflIII ACRYGT 2 cut(s) 486, 999
AgsI TTSAA 5 cut(s) 355, 730, 739, 1513, 1724
AjnI CCWGG 5 cut(s) 778, 1233, 1458, 1655, 1974
Alw21I GWGCWC 1 cut(s) 307
Alw26I GTCTC 5 cut(s) 237, 1138, 1232, 1252, 1654
AlwI GGATC 4 cut(s) 569, 790, 1119, 1934
AlwNI CAGNNNCTG 2 cut(s) 1289, 1922
Ama87I CYCGRG 1 cut(s) 887
Aor51HI AGCGCT 2 cut(s) 1077, 1548
AoxI GGCC 3 cut(s) 294, 328, 492
ApeKI GCWGC 6 cut(s) 838, 853, 1249, 1433, 1730, 1843
ApoI RAATTY 4 cut(s) 31, 350, 630, 1507
ArsI GACNNNNNNTTYG 2 cut(s) 989, 1021
AseI ATTAAT 1 cut(s) 1805
Asp718I GGTACC 1 cut(s) 1870
AspLEI GCGC 7 cut(s) 464, 700, 829, 1078, 1198, 1549, 1700
AspS9I GGNCC 1 cut(s) 793
AsuHPI GGTGA 4 cut(s) 207, 584, 1564, 1868
AsuNHI GCTAGC 1 cut(s) 1543
AvaI CYCGRG 1 cut(s) 887
AvaII GGWCC 1 cut(s) 793
BaeGI GKGCMC 2 cut(s) 404, 1587
BalI TGGCCA 1 cut(s) 494
BanI GGYRCC 2 cut(s) 1652, 1870
BanII GRGCYC 1 cut(s) 307
BbsI GAAGAC 1 cut(s) 1228
Bbv12I GWGCWC 1 cut(s) 307
BbvI GCAGC 6 cut(s) 850, 865, 1261, 1420, 1742, 1855
BccI CCATC 6 cut(s) 250, 563, 977, 1165, 1792, 1861
BceAI ACGGC 2 cut(s) 731, 1786
BcgI CGANNNNNNTGC 2 cut(s) 1690, 1724
BciT130I CCWGG 5 cut(s) 780, 1235, 1460, 1657, 1976
BclI TGATCA 1 cut(s) 10
BcoDI GTCTC 5 cut(s) 237, 1138, 1232, 1252, 1654
BfaI CTAG 3 cut(s) 1119, 1544, 1959
BfmI CTRYAG 2 cut(s) 851, 1434
BfoI RGCGCY 3 cut(s) 1079, 1199, 1550
BfuAI ACCTGC 1 cut(s) 853
BisI GCNGC 6 cut(s) 839, 854, 1250, 1434, 1731, 1844
BlsI GCNGC 6 cut(s) 840, 855, 1251, 1435, 1732, 1845
Bme1390I CCNGG 5 cut(s) 780, 1235, 1460, 1657, 1976
Bme18I GGWCC 1 cut(s) 793
BmeT110I CYCGRG 1 cut(s) 887
BmgT120I GGNCC 1 cut(s) 793
BmiI GGNNCC 4 cut(s) 1210, 1317, 1654, 1872
BmrFI CCNGG 5 cut(s) 780, 1235, 1460, 1657, 1976
BmsI GCATC 2 cut(s) 814, 1959
BmtI GCTAGC 1 cut(s) 1547
BoxI GACNNNNGTC 1 cut(s) 654
BpiI GAAGAC 1 cut(s) 1228
BpmI CTGGAG 4 cut(s) 740, 1266, 1521, 1658
BpuEI CTTGAG 1 cut(s) 637
BsaBI GATNNNNATC 1 cut(s) 573
BsaI GGTCTC 1 cut(s) 1252
BsaJI CCNNGG 7 cut(s) 251, 321, 888, 927, 1350, 1458, 1975
BsaWI WCCGGW 1 cut(s) 1532
BsaXI ACNNNNNCTCC 2 cut(s) 609, 639
Bsc4I CCNNNNNNNGG 9 cut(s) 337, 409, 513, 666, 667, 889, 1205, 1351, 1976
Bse1I ACTGG 3 cut(s) 387, 1230, 1326
Bse3DI GCAATG 3 cut(s) 773, 1459, 1767
Bse8I GATNNNNATC 1 cut(s) 573
BseBI CCWGG 5 cut(s) 780, 1235, 1460, 1657, 1976
BseDI CCNNGG 7 cut(s) 251, 321, 888, 927, 1350, 1458, 1975
BseGI GGATG 1 cut(s) 1950
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 9 cut(s) 337, 409, 513, 666, 667, 889, 1205, 1351, 1976
BseMI GCAATG 3 cut(s) 773, 1459, 1767
BseMII CTCAG 3 cut(s) 806, 1268, 1380
BseNI ACTGG 3 cut(s) 387, 1230, 1326
BseRI GAGGAG 6 cut(s) 237, 240, 605, 1263, 1328, 1362
BseSI GKGCMC 2 cut(s) 404, 1587
BseXI GCAGC 6 cut(s) 850, 865, 1261, 1420, 1742, 1855
BseYI CCCAGC 2 cut(s) 1405, 1523
BsgI GTGCAG 2 cut(s) 831, 1814
Bsh1236I CGCG 2 cut(s) 462, 1700
BshFI GGCC 3 cut(s) 296, 330, 494
BshNI GGYRCC 2 cut(s) 1652, 1870
BsiHKAI GWGCWC 1 cut(s) 307
BsiHKCI CYCGRG 1 cut(s) 887
BsiSI CCGG 1 cut(s) 1533
BslFI GGGAC 2 cut(s) 642, 1540
BslI CCNNNNNNNGG 9 cut(s) 337, 409, 513, 666, 667, 889, 1205, 1351, 1976
BsmAI GTCTC 5 cut(s) 237, 1138, 1232, 1252, 1654
BsmBI CGTCTC 1 cut(s) 237
BsmFI GGGAC 2 cut(s) 642, 1540
BsmI GAATGC 3 cut(s) 480, 1454, 1684
BsnI GGCC 3 cut(s) 296, 330, 494
Bso31I GGTCTC 1 cut(s) 1252
BsoBI CYCGRG 1 cut(s) 887
Bsp1286I GDGCHC 3 cut(s) 307, 404, 1587
Bsp143I GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
BspACI CCGC 2 cut(s) 678, 1914
BspANI GGCC 3 cut(s) 296, 330, 494
BspCNI CTCAG 3 cut(s) 807, 1267, 1381
BspFNI CGCG 2 cut(s) 462, 1700
BspLI GGNNCC 4 cut(s) 1210, 1317, 1654, 1872
BspMAI CTGCAG 2 cut(s) 855, 1438
BspMI ACCTGC 1 cut(s) 853
BspOI GCTAGC 1 cut(s) 1547
BspPI GGATC 4 cut(s) 569, 790, 1119, 1934
BspT107I GGYRCC 2 cut(s) 1652, 1870
BspTNI GGTCTC 1 cut(s) 1252
BsrDI GCAATG 3 cut(s) 773, 1459, 1767
BsrI ACTGG 3 cut(s) 387, 1230, 1326
BssECI CCNNGG 7 cut(s) 251, 321, 888, 927, 1350, 1458, 1975
BssMI GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
BssT1I CCWWGG 3 cut(s) 321, 927, 1350
Bst2UI CCWGG 5 cut(s) 780, 1235, 1460, 1657, 1976
Bst4CI ACNGT 6 cut(s) 52, 57, 184, 376, 1203, 1665
Bst6I CTCTTC 1 cut(s) 1173
BstAPI GCANNNNNTGC 2 cut(s) 1840, 1922
BstC8I GCNNGC 5 cut(s) 884, 1080, 1545, 1709, 1918
BstDEI CTNAG 4 cut(s) 815, 1254, 1389, 1412
BstEII GGTNACC 1 cut(s) 1552
BstENI CCTNNNNNAGG 1 cut(s) 335
BstF5I GGATG 1 cut(s) 1950
BstFNI CGCG 2 cut(s) 462, 1700
BstH2I RGCGCY 3 cut(s) 1079, 1199, 1550
BstHHI GCGC 7 cut(s) 464, 700, 829, 1078, 1198, 1549, 1700
BstKTI GATC 6 cut(s) 13, 577, 785, 1114, 1402, 1942
BstMAI GTCTC 5 cut(s) 237, 1138, 1232, 1252, 1654
BstMBI GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
BstMWI GCNNNNNNNGC 9 cut(s) 302, 470, 835, 1034, 1704, 1808, 1840, 1852, 1922
BstNI CCWGG 5 cut(s) 780, 1235, 1460, 1657, 1976
BstNSI RCATGY 1 cut(s) 1003
BstPAI GACNNNNGTC 1 cut(s) 654
BstPI GGTNACC 1 cut(s) 1552
BstSCI CCNGG 5 cut(s) 778, 1233, 1458, 1655, 1974
BstSFI CTRYAG 2 cut(s) 851, 1434
BstSLI GKGCMC 2 cut(s) 404, 1587
BstUI CGCG 2 cut(s) 462, 1700
BstV1I GCAGC 6 cut(s) 850, 865, 1261, 1420, 1742, 1855
BstV2I GAAGAC 1 cut(s) 1228
BstX2I RGATCY 2 cut(s) 1111, 1939
BstYI RGATCY 2 cut(s) 1111, 1939
BsuRI GGCC 3 cut(s) 296, 330, 494
BtsCI GGATG 1 cut(s) 1950
BtsI GCAGTG 1 cut(s) 848
BtsIMutI CAGTG 5 cut(s) 381, 453, 848, 1319, 1395
BveI ACCTGC 1 cut(s) 853
Cac8I GCNNGC 5 cut(s) 884, 1080, 1545, 1709, 1918
CaiI CAGNNNCTG 2 cut(s) 1289, 1922
CfoI GCGC 7 cut(s) 464, 700, 829, 1078, 1198, 1549, 1700
Cfr13I GGNCC 1 cut(s) 793
CseI GACGC 1 cut(s) 1034
Csp6I GTAC 5 cut(s) 53, 106, 273, 1871, 1962
CviAII CATG 4 cut(s) 874, 1000, 1840, 1861
CviQI GTAC 5 cut(s) 53, 106, 273, 1871, 1962
DdeI CTNAG 4 cut(s) 815, 1254, 1389, 1412
DpnI GATC 6 cut(s) 12, 576, 784, 1113, 1401, 1941
DpnII GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
DraI TTTAAA 2 cut(s) 643, 955
EaeI YGGCCR 1 cut(s) 492
Eam1104I CTCTTC 1 cut(s) 1173
EarI CTCTTC 1 cut(s) 1173
Ecl136II GAGCTC 1 cut(s) 305
Eco130I CCWWGG 3 cut(s) 321, 927, 1350
Eco147I AGGCCT 1 cut(s) 296
Eco24I GRGCYC 1 cut(s) 307
Eco31I GGTCTC 1 cut(s) 1252
Eco32I GATATC 2 cut(s) 367, 1383
Eco47I GGWCC 1 cut(s) 793
Eco47III AGCGCT 2 cut(s) 1077, 1548
Eco53kI GAGCTC 1 cut(s) 305
Eco57I CTGAAG 3 cut(s) 329, 568, 1092
Eco88I CYCGRG 1 cut(s) 887
Eco91I GGTNACC 1 cut(s) 1552
EcoICRI GAGCTC 1 cut(s) 305
EcoNI CCTNNNNNAGG 1 cut(s) 335
EcoO65I GGTNACC 1 cut(s) 1552
EcoRI GAATTC 1 cut(s) 350
EcoRII CCWGG 5 cut(s) 778, 1233, 1458, 1655, 1974
EcoRV GATATC 2 cut(s) 367, 1383
EcoT14I CCWWGG 3 cut(s) 321, 927, 1350
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 3 cut(s) 321, 927, 1350
Esp3I CGTCTC 1 cut(s) 237
FaeI CATG 4 cut(s) 877, 1003, 1843, 1864
FalI AAGNNNNNCTT 2 cut(s) 85, 117
FaqI GGGAC 2 cut(s) 642, 1540
FatI CATG 4 cut(s) 873, 999, 1839, 1860
FauI CCCGC 1 cut(s) 1921
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 1 cut(s) 10
Fnu4HI GCNGC 6 cut(s) 839, 854, 1250, 1434, 1731, 1844
FokI GGATG 1 cut(s) 1937
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 6 cut(s) 839, 854, 1250, 1434, 1731, 1844
FspBI CTAG 3 cut(s) 1119, 1544, 1959
GlaI GCGC 7 cut(s) 463, 699, 828, 1077, 1197, 1548, 1699
GluI GCNGC 6 cut(s) 839, 854, 1250, 1434, 1731, 1844
GsaI CCCAGC 2 cut(s) 1409, 1527
GsuI CTGGAG 4 cut(s) 740, 1266, 1521, 1658
HaeII RGCGCY 3 cut(s) 1079, 1199, 1550
HaeIII GGCC 3 cut(s) 296, 330, 494
HapII CCGG 1 cut(s) 1533
HgaI GACGC 1 cut(s) 1034
HhaI GCGC 7 cut(s) 464, 700, 829, 1078, 1198, 1549, 1700
Hin1II CATG 4 cut(s) 877, 1003, 1843, 1864
Hin6I GCGC 7 cut(s) 462, 698, 827, 1076, 1196, 1547, 1698
HinP1I GCGC 7 cut(s) 462, 698, 827, 1076, 1196, 1547, 1698
HincII GTYRAC 3 cut(s) 343, 997, 1064
HindII GTYRAC 3 cut(s) 343, 997, 1064
HinfI GANTC 6 cut(s) 4, 150, 314, 451, 650, 1340
HpaII CCGG 1 cut(s) 1533
HphI GGTGA 4 cut(s) 207, 584, 1564, 1868
Hpy166II GTNNAC 5 cut(s) 60, 343, 458, 997, 1064
Hpy188III TCNNGA 6 cut(s) 8, 140, 1017, 1283, 1500, 1675
Hpy8I GTNNAC 5 cut(s) 60, 343, 458, 997, 1064
Hpy99I CGWCG 2 cut(s) 1028, 1705
HpyAV CCTTC 8 cut(s) 237, 286, 304, 373, 403, 592, 784, 1643
HpyCH4III ACNGT 6 cut(s) 52, 57, 184, 376, 1203, 1665
HpyCH4IV ACGT 4 cut(s) 393, 415, 488, 1791
HpyF10VI GCNNNNNNNGC 9 cut(s) 302, 470, 835, 1034, 1704, 1808, 1840, 1852, 1922
HpyF3I CTNAG 4 cut(s) 815, 1254, 1389, 1412
HpySE526I ACGT 4 cut(s) 393, 415, 488, 1791
Hsp92II CATG 4 cut(s) 877, 1003, 1843, 1864
HspAI GCGC 7 cut(s) 462, 698, 827, 1076, 1196, 1547, 1698
KpnI GGTACC 1 cut(s) 1874
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
LmnI GCTCC 8 cut(s) 142, 302, 592, 680, 835, 1315, 1502, 1540
Lsp1109I GCAGC 6 cut(s) 850, 865, 1261, 1420, 1742, 1855
LweI GCATC 2 cut(s) 814, 1959
MaeI CTAG 3 cut(s) 1119, 1544, 1959
MaeII ACGT 4 cut(s) 393, 415, 488, 1791
MaeIII GTNAC 4 cut(s) 389, 1552, 1623, 1665
MalI GATC 6 cut(s) 12, 576, 784, 1113, 1401, 1941
MboI GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
MflI RGATCY 2 cut(s) 1111, 1939
MhlI GDGCHC 3 cut(s) 307, 404, 1587
MlsI TGGCCA 1 cut(s) 494
MluCI AATT 7 cut(s) 18, 31, 350, 630, 907, 981, 1507
MluNI TGGCCA 1 cut(s) 494
MlyI GAGTC 3 cut(s) 159, 308, 644
MmeI TCCRAC 3 cut(s) 152, 500, 1791
Mox20I TGGCCA 1 cut(s) 494
MscI TGGCCA 1 cut(s) 494
MslI CAYNNNNRTG 2 cut(s) 265, 1865
Msp20I TGGCCA 1 cut(s) 494
MspI CCGG 1 cut(s) 1533
MspR9I CCNGG 5 cut(s) 780, 1235, 1460, 1657, 1976
Mva1269I GAATGC 3 cut(s) 480, 1454, 1684
MvaI CCWGG 5 cut(s) 780, 1235, 1460, 1657, 1976
MvnI CGCG 2 cut(s) 462, 1700
MwoI GCNNNNNNNGC 9 cut(s) 302, 470, 835, 1034, 1704, 1808, 1840, 1852, 1922
NdeI CATATG 1 cut(s) 694
NdeII GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
NheI GCTAGC 1 cut(s) 1543
NlaIII CATG 4 cut(s) 877, 1003, 1843, 1864
NlaIV GGNNCC 4 cut(s) 1210, 1317, 1654, 1872
NmuCI GTSAC 2 cut(s) 389, 1552
NspI RCATGY 1 cut(s) 1003
PceI AGGCCT 1 cut(s) 296
PciI ACATGT 1 cut(s) 999
PctI GAATGC 3 cut(s) 480, 1454, 1684
PfeI GAWTC 3 cut(s) 4, 451, 1340
PkrI GCNGC 6 cut(s) 840, 855, 1251, 1435, 1732, 1845
PleI GAGTC 3 cut(s) 158, 308, 644
PpsI GAGTC 3 cut(s) 158, 308, 644
PscI ACATGT 1 cut(s) 999
PshAI GACNNNNGTC 1 cut(s) 654
PshBI ATTAAT 1 cut(s) 1805
PsiI TTATAA 2 cut(s) 903, 986
Psp124BI GAGCTC 1 cut(s) 307
Psp6I CCWGG 5 cut(s) 778, 1233, 1458, 1655, 1974
PspEI GGTNACC 1 cut(s) 1552
PspFI CCCAGC 2 cut(s) 1405, 1523
PspGI CCWGG 5 cut(s) 778, 1233, 1458, 1655, 1974
PspN4I GGNNCC 4 cut(s) 1210, 1317, 1654, 1872
PspPI GGNCC 1 cut(s) 793
PstI CTGCAG 2 cut(s) 855, 1438
PstNI CAGNNNCTG 2 cut(s) 1289, 1922
PsuI RGATCY 2 cut(s) 1111, 1939
RsaI GTAC 5 cut(s) 54, 107, 274, 1872, 1963
RsaNI GTAC 5 cut(s) 53, 106, 273, 1871, 1962
RseI CAYNNNNRTG 2 cut(s) 265, 1865
SacI GAGCTC 1 cut(s) 307
SatI GCNGC 6 cut(s) 839, 854, 1250, 1434, 1731, 1844
Sau3AI GATC 6 cut(s) 10, 574, 782, 1111, 1399, 1939
Sau96I GGNCC 1 cut(s) 793
SchI GAGTC 3 cut(s) 159, 308, 644
ScrFI CCNGG 5 cut(s) 780, 1235, 1460, 1657, 1976
SduI GDGCHC 3 cut(s) 307, 404, 1587
SfaNI GCATC 2 cut(s) 814, 1959
SfcI CTRYAG 2 cut(s) 851, 1434
SinI GGWCC 1 cut(s) 793
SmiMI CAYNNNNRTG 2 cut(s) 265, 1865
SmlI CTYRAG 1 cut(s) 652
SmoI CTYRAG 1 cut(s) 652
Sse9I AATT 7 cut(s) 18, 31, 350, 630, 907, 981, 1507
SseBI AGGCCT 1 cut(s) 296
SsiI CCGC 2 cut(s) 678, 1914
SspI AATATT 2 cut(s) 1045, 1895
SspMI CTAG 3 cut(s) 1119, 1544, 1959
SstI GAGCTC 1 cut(s) 307
StuI AGGCCT 1 cut(s) 296
StyD4I CCNGG 5 cut(s) 778, 1233, 1458, 1655, 1974
StyI CCWWGG 3 cut(s) 321, 927, 1350
TaaI ACNGT 6 cut(s) 52, 57, 184, 376, 1203, 1665
TaiI ACGT 4 cut(s) 396, 418, 491, 1794
TaqI TCGA 1 cut(s) 1365
TasI AATT 7 cut(s) 18, 31, 350, 630, 907, 981, 1507
TatI WGTACW 1 cut(s) 1961
TfiI GAWTC 3 cut(s) 4, 451, 1340
TscAI CASTG 5 cut(s) 381, 453, 855, 1326, 1402
TseFI GTSAC 2 cut(s) 389, 1552
TseI GCWGC 6 cut(s) 838, 853, 1249, 1433, 1730, 1843
Tsp45I GTSAC 2 cut(s) 389, 1552
TspDTI ATGAA 5 cut(s) 542, 1281, 1503, 1656, 1662
TspGWI ACGGA 2 cut(s) 529, 993
TspRI CASTG 5 cut(s) 381, 453, 855, 1326, 1402
VpaK11BI GGWCC 1 cut(s) 793
VspI ATTAAT 1 cut(s) 1805
XagI CCTNNNNNAGG 1 cut(s) 335
XapI RAATTY 4 cut(s) 31, 350, 630, 1507
XceI RCATGY 1 cut(s) 1003
XspI CTAG 3 cut(s) 1119, 1544, 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.