Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005887

Physical Location & Seq

Genomic Coordinates Reverse (-)

1522906 .. 1526843

Gene Structure 3938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGATCAACAGAACTCCACCACCACTCCAACTCCCTCCACGTCCCAACCATCCATTGAACCACCCCAAACCGCCCAACCCCAGCCTCCACCTCAGCCTCAGCCACCGTCGTCCTCCTCCTTAACAACCACTCCAACCTCCACCCCAAGCCCCCCTTCCCCAAACCCTAACCCTAAACCCTCAACCCCATTGCCCCCACAACCACTACATCAACCACAACCGCCCCCCCAGTCCCTTCCACCCCCTTCGCAGCCCAGGCCTCCCTCCACATTGACTCGTCCTCCTTGGCAGCAGCAGTCCCACTTCCACCAGTATCCTTCGCCTTCTTCTTCCGCTTCGTCTGGGCCTCCTCCGCCGCCTTCACCCTCTCAGCCTCCCCCGCCGAGGGGCGGCATTGCCATTGGTGTTTCTGCGCATCACACCGGCCCTTCTACTCCTCAACCCACGCCTTATTCGTCTTCCTATGGGCATCATTTTGGTGGGATGGGCCGTGGCGGCGTCTCTGTGCCCGAACCTGTATCCAATTCCAGTCCTTCCCAGGTGAGACCATCAATGCAAGGAATGCAGGGAATAGGGATGATGGGTTCACTCGGTTCTAGTTCTCAAATGCGGCCAACTGGGATTCCGGCACACCATCCACAGAGACCAGTTCAATCCTCTCTTAGACCACCATCTACTGCGAGTAATCAGTCCCCATCTTCCCAAAATTTCCAAGGGCACAGCCTTTTACGAGTTTCATCAGTTGGATCTGCTAGTTCATCACCAAATGCATCTCAAGGTTTGCAGCCTCATACTCAGCCATGGTTGTCATCTGGGCCACAAGGGAAGCCTCCTATCCCATCCCCTTCATATAGGCAGCAGATGAACTCGCCATCCATGCAGCAAAGATCACATCTTCCGCAGCAACAGCAACAGTCTCATCCCCATCCTACAGCTTCGCAGCTACAGCACCATCCAATGCCTTCAGCTCCCCAGCAGCAGCACCATCCCCTGCCTTCTGCTTCACAGCAGCAGCACCATTCCCTGACTTCTGCTTCACCGCACCAACCCCTGCCTTCAGCTTCACAGCAACAGCCTACATCATCTGCACAACAAGTTCAGCAATCAAGGGTCCCACAAACCACGCCTCGTCAGCAACAGATCACAAGGGTGCAGGGCCCTGTCAATCCCAAGTCTTCCGCTCTTGTAGCTGCACAGCCTAACACAGTCCAATCAGGGGCCCAAAATAAAACTCTTAGTCCAGAAACAGATGAATCTTGTAATAGAATTCTTGGTAAAAGAAGCATCCGTGAGCTAGTCAACCAGATTGATCCATCTGAGAAGTTGGATCCAGAAGTTGAAGAAATTCTCATGGACATTGCGGATGAATTTGTTGATTCTATTACAACATTTAGTTGCTCACTAGCCAAGCATAGAAAATCAACTCAATTAGAAGCAAAAGACATACTTCTACATATTGAAAAGAATTGGAATATAACTCTGCCTGGGTTCGGTGGTGATGAGATTAAAGGCTTCAAAAAACCACTTACAAATGATATCCACAAGGAGCGTCTTGCTGTGATAAAGAAGTCCATAGTAGCAACTGAGACAGCAAATGCTAGGAATCCCGCTGGACAAGCTGCTGGAAATGCAAAGGGTAGTCTTGTTAAGACACCTGCCAACGTCATAAGCTCCCAAAACTCTAAAATGCGTGAAGTTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0000124 GO:0000428 GO:0001085 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019438 GO:0019538 GO:0022607 GO:0030880 GO:0031248 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0051123 GO:0051276 GO:0055029 GO:0061695 GO:0065003 GO:0065004 GO:0070013 GO:0070461 GO:0070897 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1902493 GO:1902494 GO:1905368 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03022 map03022

Pfam Domains

Protein Families

TFIID_20kDa

Protein Analysis

568

Amino Acids

60.41

Weight (kDa)

9.96

Isoelectric Point (pI)

82.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIID_20kDa	PF03847	425 - 492	1e-30	Transcription initiation factor TFIID subunit A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005887)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10070
fragaria_vesca	FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380 FvH4_6g18380
malus_domestica	MD12G1023000.v1.1 MD14G1020000.v1.1
prunus_persica	Prupe.7G113600_v2.0.a1
pyrus_communis	pycom12g02150 pycom14g01960
rosa_chinensis	RchiOBHm_Chr3g0472861
rosa_laevigata	RLG00000024050
rosa_multiflora	Rmu_sc0020146.1_g000004
rosa_roxburghii	Rroxscaffold_6G00408550
rosa_rugosa	Rorug03G0128200 Rorug03G0128300 Rorug03G0128400 Rorug03G0128500 Rorug03G0128600 Rorug03G0128700 Rorug03G0128800
rosa_samantha	Rh3AG180900 Rh3BG207100 Rh3CG204300 Rh3DG168800
rosa_wichuraiana	Rw3G016210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1663
Acc16I	TGCGCA	1 cut(s)	414
Acc36I	ACCTGC	1 cut(s)	1663
AccBSI	CCGCTC	1 cut(s)	1181
AclWI	GGATC	5 cut(s)	12, 754, 1304, 1322, 1335
AcoI	YGGCCR	1 cut(s)	611
AcsI	RAATTY	4 cut(s)	706, 1266, 1344, 1367
AcuI	CTGAAG	2 cut(s)	948, 1041
AcyI	GRCGYC	1 cut(s)	498
AfiI	CCNNNNNNNGG	6 cut(s)	384, 385, 386, 389, 1216, 1490
AgsI	TTSAA	5 cut(s)	59, 653, 1340, 1460, 1516
AjiI	CACGTC	1 cut(s)	42
AjnI	CCWGG	3 cut(s)	254, 537, 1483
AjuI	GAANNNNNNNTTGG	2 cut(s)	139, 171
AleI	CACNNNNGTG	1 cut(s)	1148
AloI	GAACNNNNNNTCC	4 cut(s)	568, 600, 857, 889
AluBI	AGCT	8 cut(s)	935, 943, 968, 1061, 1190, 1294, 1619, 1671
AluI	AGCT	8 cut(s)	935, 943, 968, 1061, 1190, 1294, 1619, 1671
Alw26I	GTCTC	5 cut(s)	505, 538, 637, 921, 1580
AlwI	GGATC	5 cut(s)	12, 754, 1304, 1322, 1335
AoxI	GGCC	8 cut(s)	257, 344, 424, 487, 611, 815, 1156, 1218
ApaI	GGGCCC	2 cut(s)	1160, 1222
ApoI	RAATTY	4 cut(s)	706, 1266, 1344, 1367
Asp700I	GAANNNNTTC	1 cut(s)	1344
AspLEI	GCGC	1 cut(s)	415
AspS9I	GGNCC	9 cut(s)	344, 425, 487, 815, 1111, 1156, 1157, 1218, 1219
AsuHPI	GGTGA	5 cut(s)	354, 553, 753, 1029, 1508
AvaII	GGWCC	1 cut(s)	1111
BaeGI	GKGCMC	4 cut(s)	510, 720, 1160, 1222
BamHI	GGATCC	1 cut(s)	1327
BanII	GRGCYC	2 cut(s)	1160, 1222
BbsI	GAAGAC	2 cut(s)	450, 1167
BbvCI	CCTCAGC	2 cut(s)	93, 99
BceAI	ACGGC	1 cut(s)	474
BciT130I	CCWGG	3 cut(s)	256, 539, 1485
BciVI	GTATCC	2 cut(s)	324, 529
BcoDI	GTCTC	5 cut(s)	505, 538, 637, 921, 1580
BfaI	CTAG	5 cut(s)	597, 753, 1295, 1403, 1599
BfmI	CTRYAG	2 cut(s)	930, 944
BfuAI	ACCTGC	1 cut(s)	1663
BfuI	GTATCC	2 cut(s)	324, 529
BglI	GCCNNNNNGGC	1 cut(s)	495
Bme1390I	CCNGG	3 cut(s)	256, 539, 1485
Bme18I	GGWCC	1 cut(s)	1111
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	9 cut(s)	344, 425, 487, 815, 1111, 1156, 1157, 1218, 1219
BmiI	GGNNCC	6 cut(s)	1112, 1113, 1158, 1219, 1220, 1329
BmrFI	CCNGG	3 cut(s)	256, 539, 1485
BmrI	ACTGGG	2 cut(s)	223, 627
BmsI	GCATC	4 cut(s)	424, 478, 779, 1293
BmuI	ACTGGG	2 cut(s)	223, 627
BpiI	GAAGAC	2 cut(s)	450, 1167
Bpu10I	CCTNAGC	2 cut(s)	93, 99
BpuEI	CTTGAG	1 cut(s)	759
BsaHI	GRCGYC	1 cut(s)	498
BsaI	GGTCTC	2 cut(s)	538, 637
BsaJI	CCNNGG	8 cut(s)	254, 284, 383, 490, 537, 712, 800, 1484
BsaXI	ACNNNNNCTCC	8 cut(s)	10, 16, 40, 46, 115, 145, 265, 295
Bsc4I	CCNNNNNNNGG	6 cut(s)	384, 385, 386, 389, 1216, 1490
Bse118I	RCCGGY	1 cut(s)	422
Bse1I	ACTGG	5 cut(s)	229, 310, 528, 622, 647
Bse3DI	GCAATG	3 cut(s)	188, 393, 1356
BseBI	CCWGG	3 cut(s)	256, 539, 1485
BseDI	CCNNGG	8 cut(s)	254, 284, 383, 490, 537, 712, 800, 1484
BseLI	CCNNNNNNNGG	6 cut(s)	384, 385, 386, 389, 1216, 1490
BseMI	GCAATG	3 cut(s)	188, 393, 1356
BseMII	CTCAG	6 cut(s)	107, 113, 383, 809, 1308, 1575
BseNI	ACTGG	5 cut(s)	229, 310, 528, 622, 647
BseRI	GAGGAG	3 cut(s)	106, 339, 426
BseSI	GKGCMC	4 cut(s)	510, 720, 1160, 1222
BseYI	CCCAGC	2 cut(s)	81, 972
BsgI	GTGCAG	3 cut(s)	1071, 1172, 1176
BshFI	GGCC	8 cut(s)	259, 346, 426, 489, 613, 817, 1158, 1220
BsiSI	CCGG	2 cut(s)	423, 626
BslFI	GGGAC	5 cut(s)	28, 217, 283, 676, 1097
BslI	CCNNNNNNNGG	6 cut(s)	384, 385, 386, 389, 1216, 1490
BsmAI	GTCTC	5 cut(s)	505, 538, 637, 921, 1580
BsmBI	CGTCTC	1 cut(s)	505
BsmFI	GGGAC	5 cut(s)	28, 217, 283, 676, 1097
BsmI	GAATGC	1 cut(s)	567
BsnI	GGCC	8 cut(s)	259, 346, 426, 489, 613, 817, 1158, 1220
Bso31I	GGTCTC	2 cut(s)	538, 637
Bsp120I	GGGCCC	2 cut(s)	1156, 1218
Bsp1286I	GDGCHC	4 cut(s)	510, 720, 1160, 1222
Bsp143I	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
Bsp19I	CCATGG	1 cut(s)	800
BspANI	GGCC	8 cut(s)	259, 346, 426, 489, 613, 817, 1158, 1220
BspCNI	CTCAG	6 cut(s)	106, 112, 382, 808, 1309, 1576
BspLI	GGNNCC	6 cut(s)	1112, 1113, 1158, 1219, 1220, 1329
BspMI	ACCTGC	1 cut(s)	1663
BspPI	GGATC	5 cut(s)	12, 754, 1304, 1322, 1335
BspTNI	GGTCTC	2 cut(s)	538, 637
BsrBI	CCGCTC	1 cut(s)	1181
BsrDI	GCAATG	3 cut(s)	188, 393, 1356
BsrFI	RCCGGY	1 cut(s)	422
BsrI	ACTGG	5 cut(s)	229, 310, 528, 622, 647
BssAI	RCCGGY	1 cut(s)	422
BssECI	CCNNGG	8 cut(s)	254, 284, 383, 490, 537, 712, 800, 1484
BssMI	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
BssNI	GRCGYC	1 cut(s)	498
BssT1I	CCWWGG	3 cut(s)	284, 712, 800
Bst2UI	CCWGG	3 cut(s)	256, 539, 1485
Bst4CI	ACNGT	3 cut(s)	108, 915, 1207
BstACI	GRCGYC	1 cut(s)	498
BstAPI	GCANNNNNTGC	1 cut(s)	562
BstDEI	CTNAG	8 cut(s)	93, 99, 369, 662, 795, 1235, 1317, 1584
BstDSI	CCRYGG	2 cut(s)	490, 800
BstHHI	GCGC	1 cut(s)	415
BstKTI	GATC	6 cut(s)	7, 749, 890, 1143, 1312, 1330
BstMAI	GTCTC	5 cut(s)	505, 538, 637, 921, 1580
BstMBI	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
BstNI	CCWGG	3 cut(s)	256, 539, 1485
BstSCI	CCNGG	3 cut(s)	254, 537, 1483
BstSFI	CTRYAG	2 cut(s)	930, 944
BstSLI	GKGCMC	4 cut(s)	510, 720, 1160, 1222
BstV2I	GAAGAC	2 cut(s)	450, 1167
BstX2I	RGATCY	2 cut(s)	746, 1327
BstYI	RGATCY	2 cut(s)	746, 1327
BsuI	GTATCC	2 cut(s)	324, 529
BsuRI	GGCC	8 cut(s)	259, 346, 426, 489, 613, 817, 1158, 1220
BtgI	CCRYGG	2 cut(s)	490, 800
BtrI	CACGTC	1 cut(s)	42
BveI	ACCTGC	1 cut(s)	1663
CfoI	GCGC	1 cut(s)	415
Cfr10I	RCCGGY	1 cut(s)	422
Cfr13I	GGNCC	9 cut(s)	344, 425, 487, 815, 1111, 1156, 1157, 1218, 1219
CseI	GACGC	2 cut(s)	487, 1538
CviAII	CATG	3 cut(s)	801, 877, 1351
DdeI	CTNAG	8 cut(s)	93, 99, 369, 662, 795, 1235, 1317, 1584
DpnI	GATC	6 cut(s)	6, 748, 889, 1142, 1311, 1329
DpnII	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
EaeI	YGGCCR	1 cut(s)	611
EciI	GGCGGA	1 cut(s)	342
Eco130I	CCWWGG	3 cut(s)	284, 712, 800
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	1160, 1222
Eco31I	GGTCTC	2 cut(s)	538, 637
Eco32I	GATATC	1 cut(s)	1537
Eco47I	GGWCC	1 cut(s)	1111
Eco57I	CTGAAG	2 cut(s)	948, 1041
EcoO109I	RGGNCCY	4 cut(s)	1111, 1156, 1157, 1218
EcoRI	GAATTC	1 cut(s)	1266
EcoRII	CCWGG	3 cut(s)	254, 537, 1483
EcoRV	GATATC	1 cut(s)	1537
EcoT14I	CCWWGG	3 cut(s)	284, 712, 800
EcoT22I	ATGCAT	1 cut(s)	772
EcoT38I	GRGCYC	2 cut(s)	1160, 1222
ErhI	CCWWGG	3 cut(s)	284, 712, 800
Esp3I	CGTCTC	1 cut(s)	505
FaeI	CATG	3 cut(s)	804, 880, 1354
FalI	AAGNNNNNCTT	4 cut(s)	139, 171, 1431, 1463
FaqI	GGGAC	5 cut(s)	28, 217, 283, 676, 1097
FatI	CATG	3 cut(s)	800, 876, 1350
FauI	CCCGC	2 cut(s)	387, 1615
FriOI	GRGCYC	2 cut(s)	1160, 1222
FspBI	CTAG	5 cut(s)	597, 753, 1295, 1403, 1599
FspI	TGCGCA	1 cut(s)	414
GlaI	GCGC	1 cut(s)	414
GsaI	CCCAGC	2 cut(s)	85, 976
HaeIII	GGCC	8 cut(s)	259, 346, 426, 489, 613, 817, 1158, 1220
HapII	CCGG	2 cut(s)	423, 626
HgaI	GACGC	2 cut(s)	487, 1538
HhaI	GCGC	1 cut(s)	415
Hin1I	GRCGYC	1 cut(s)	498
Hin1II	CATG	3 cut(s)	804, 880, 1354
Hin6I	GCGC	1 cut(s)	413
HinP1I	GCGC	1 cut(s)	413
HincII	GTYRAC	1 cut(s)	1300
HindII	GTYRAC	1 cut(s)	1300
HinfI	GANTC	5 cut(s)	274, 622, 1253, 1376, 1603
HpaII	CCGG	2 cut(s)	423, 626
HphI	GGTGA	5 cut(s)	354, 553, 753, 1029, 1508
Hpy166II	GTNNAC	2 cut(s)	587, 1300
Hpy188I	TCNGA	1 cut(s)	1318
Hpy188III	TCNNGA	2 cut(s)	1241, 1331
Hpy8I	GTNNAC	2 cut(s)	587, 1300
Hpy99I	CGWCG	1 cut(s)	112
HpyCH4III	ACNGT	3 cut(s)	108, 915, 1207
HpyCH4IV	ACGT	2 cut(s)	41, 1662
HpyCH4V	TGCA	9 cut(s)	556, 565, 770, 784, 880, 1088, 1153, 1193, 1631
HpyF3I	CTNAG	8 cut(s)	93, 99, 369, 662, 795, 1235, 1317, 1584
HpySE526I	ACGT	2 cut(s)	41, 1662
Hsp92I	GRCGYC	1 cut(s)	498
Hsp92II	CATG	3 cut(s)	804, 880, 1354
HspAI	GCGC	1 cut(s)	413
KflI	GGGWCCC	1 cut(s)	1111
Kzo9I	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
LmnI	GCTCC	3 cut(s)	973, 1546, 1676
LweI	GCATC	4 cut(s)	424, 478, 779, 1293
MaeI	CTAG	5 cut(s)	597, 753, 1295, 1403, 1599
MaeII	ACGT	2 cut(s)	41, 1662
MaeIII	GTNAC	1 cut(s)	1696
MalI	GATC	6 cut(s)	6, 748, 889, 1142, 1311, 1329
MbiI	CCGCTC	1 cut(s)	1181
MboI	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
MboII	GAAGA	7 cut(s)	318, 321, 450, 690, 887, 1167, 1352
MflI	RGATCY	2 cut(s)	746, 1327
MhlI	GDGCHC	4 cut(s)	510, 720, 1160, 1222
MluCI	AATT	7 cut(s)	523, 706, 1266, 1344, 1367, 1427, 1465
MlyI	GAGTC	1 cut(s)	268
MmeI	TCCRAC	4 cut(s)	53, 158, 724, 1305
Mph1103I	ATGCAT	1 cut(s)	772
MroXI	GAANNNNTTC	1 cut(s)	1344
MseI	TTAA	3 cut(s)	122, 1506, 1647
MslI	CAYNNNNRTG	2 cut(s)	477, 1148
MspA1I	CMGCKG	1 cut(s)	1610
MspI	CCGG	2 cut(s)	423, 626
MspR9I	CCNGG	3 cut(s)	256, 539, 1485
Mva1269I	GAATGC	1 cut(s)	567
MvaI	CCWGG	3 cut(s)	256, 539, 1485
NcoI	CCATGG	1 cut(s)	800
NdeII	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
NlaIII	CATG	3 cut(s)	804, 880, 1354
NlaIV	GGNNCC	6 cut(s)	1112, 1113, 1158, 1219, 1220, 1329
NmeAIII	GCCGAG	1 cut(s)	408
NsbI	TGCGCA	1 cut(s)	414
NsiI	ATGCAT	1 cut(s)	772
OliI	CACNNNNGTG	1 cut(s)	1148
PaqCI	CACCTGC	1 cut(s)	1663
PceI	AGGCCT	1 cut(s)	259
PcsI	WCGNNNNNNNCGW	1 cut(s)	452
PctI	GAATGC	1 cut(s)	567
PdmI	GAANNNNTTC	1 cut(s)	1344
PfeI	GAWTC	4 cut(s)	622, 1253, 1376, 1603
PleI	GAGTC	1 cut(s)	268
PpsI	GAGTC	1 cut(s)	268
PpuMI	RGGWCCY	1 cut(s)	1111
Psp5II	RGGWCCY	1 cut(s)	1111
Psp6I	CCWGG	3 cut(s)	254, 537, 1483
PspFI	CCCAGC	2 cut(s)	81, 972
PspGI	CCWGG	3 cut(s)	254, 537, 1483
PspN4I	GGNNCC	6 cut(s)	1112, 1113, 1158, 1219, 1220, 1329
PspOMI	GGGCCC	2 cut(s)	1156, 1218
PspPI	GGNCC	9 cut(s)	344, 425, 487, 815, 1111, 1156, 1157, 1218, 1219
PspPPI	RGGWCCY	1 cut(s)	1111
PsuI	RGATCY	2 cut(s)	746, 1327
RseI	CAYNNNNRTG	2 cut(s)	477, 1148
SaqAI	TTAA	3 cut(s)	122, 1506, 1647
Sau3AI	GATC	6 cut(s)	4, 746, 887, 1140, 1309, 1327
Sau96I	GGNCC	9 cut(s)	344, 425, 487, 815, 1111, 1156, 1157, 1218, 1219
SchI	GAGTC	1 cut(s)	268
ScrFI	CCNGG	3 cut(s)	256, 539, 1485
SduI	GDGCHC	4 cut(s)	510, 720, 1160, 1222
SfaNI	GCATC	4 cut(s)	424, 478, 779, 1293
SfcI	CTRYAG	2 cut(s)	930, 944
SinI	GGWCC	1 cut(s)	1111
SmiMI	CAYNNNNRTG	2 cut(s)	477, 1148
SmlI	CTYRAG	1 cut(s)	774
SmoI	CTYRAG	1 cut(s)	774
Sse9I	AATT	7 cut(s)	523, 706, 1266, 1344, 1367, 1427, 1465
SseBI	AGGCCT	1 cut(s)	259
SspMI	CTAG	5 cut(s)	597, 753, 1295, 1403, 1599
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	3 cut(s)	254, 537, 1483
StyI	CCWWGG	3 cut(s)	284, 712, 800
TaaI	ACNGT	3 cut(s)	108, 915, 1207
TaiI	ACGT	2 cut(s)	44, 1665
TasI	AATT	7 cut(s)	523, 706, 1266, 1344, 1367, 1427, 1465
TauI	GCSGC	4 cut(s)	358, 393, 498, 613
TfiI	GAWTC	4 cut(s)	622, 1253, 1376, 1603
Tru1I	TTAA	3 cut(s)	122, 1506, 1647
Tru9I	TTAA	3 cut(s)	122, 1506, 1647
TspDTI	ATGAA	6 cut(s)	726, 747, 837, 878, 1266, 1380
TspGWI	ACGGA	1 cut(s)	1277
VpaK11BI	GGWCC	1 cut(s)	1111
XapI	RAATTY	4 cut(s)	706, 1266, 1344, 1367
XmnI	GAANNNNTTC	1 cut(s)	1344
XspI	CTAG	5 cut(s)	597, 753, 1295, 1403, 1599
Zsp2I	ATGCAT	1 cut(s)	772

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.