pycom14g04790

glycerol kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0015717
Physical Location & Seq
Reverse (-)
4486743 .. 4487970
1228 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g04790.2

Sequence Viewer

Length: 1185 bp
ATGAAGGCTCCTTATTCTTTCTCTGCCGTCTCGATTTCCTCAATTTCGCCAGAAATTGGGTCTTCGCCCACAGTCTCCCTGGGCACTCGTCAAACTGCACCACCAAATGTCACTGTGTCAATGTTTGGCTCTCCTTCATCGCTCTTTGCCTATACTATTCTGCCTTCTCATGGGCCATCGTTGGTCCCGAATTCCACCAACTCCACCAATGCACTACCCCATCTGAGTGGTTGCAACGACTTAGACAAAGGTGTACAAAGTATGGGTTTCTTGCTCACACACTCAGACACCAATTTGCAACTTATGCACCTTCGTCAACTCTCTTTCCTTGACACTACGAAAACTGGACCTGAGATATTTAATTCCTTGAATGATTGTTTGGGAAATTTAAGGGTTTTATTTTGTTGGCTCTTATGTGATGTTTTTTTTAATGATTCCAATTGGTGGTTTTGTAAGTACCTTGTGGGCACATTCGAGAAAGGTATTTTGAATGCAGCTGAACTGTTTCATGAAATGTCTACGAGATGGAGTGATGGCAATATGGGTACTCTATTTGATTTCTTATATCAGCCGGAAAGCAATTTGGATGCTTTGGCTATAGATCTATATGTTGATTTCTCTCTGTTGTTCACAAGGAAGCTATATGTTGATTTCTCTCTGCTGTTCACTAGGAACCTTGACTTTCAGCCTGTATGGGATCCGGGCAATGCTGTAACTAACACTATAGAGTTGATGTGCTGTTTTATGTGCCAAAAGAACCATTTCGATGTGCACCCTCAATTTTTGGTTTTGCCGCTAGACCTCATAAATCCTGCAATGCATTCTACTTGTCTACAACCACAGGTGCTTGCCACAGGAATAGGAATTATTCAACATAAATCTAGGTTTTTGCACTTGACGGTCCAATCTCAGTACATGAGGTATTGTTCTTGTTTCAATCTTTCAACGAATTATGTTTTGTGCATTTATGAGCATGAACCATATCATATTTCTATTGTTGGAGTTTGTCCGTTTGCAGCCACCCATGTTATTCCTCCACTTCAGAGACTTGTTGGTCTTGTTCTTATTACTGATCCCATGGTTATACAGATTGCTTTTGGCAAGCATTTTAATAGTGCGAAGTCCATAGTTGAGTGCACTACTACATATTTGGTTGATGTTATAGCTTCTCTGTTTCTCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00030 ko01100 ko01110 ko01120 ko01130 ko01200 map00030 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

395

Amino Acids

44.04

Weight (kDa)

5.71

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1053
AccB7I CCANNNNNTGG 2 cut(s) 56, 444
AccI GTMKAC 2 cut(s) 518, 832
AciI CCGC 1 cut(s) 794
AclWI GGATC 3 cut(s) 692, 705, 1067
AcsI RAATTY 2 cut(s) 190, 385
AcuI CTGAAG 1 cut(s) 1025
AfaI GTAC 4 cut(s) 255, 458, 547, 914
AfiI CCNNNNNNNGG 3 cut(s) 56, 170, 444
AgsI TTSAA 5 cut(s) 370, 490, 872, 937, 945
AjnI CCWGG 1 cut(s) 78
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AluBI AGCT 3 cut(s) 497, 640, 1166
AluI AGCT 3 cut(s) 497, 640, 1166
Alw21I GWGCWC 2 cut(s) 774, 1139
Alw26I GTCTC 3 cut(s) 34, 79, 1039
Alw44I GTGCAC 2 cut(s) 770, 1135
AlwI GGATC 3 cut(s) 692, 705, 1067
AoxI GGCC 1 cut(s) 173
ApaLI GTGCAC 2 cut(s) 770, 1135
ApeKI GCWGC 2 cut(s) 494, 1016
ApoI RAATTY 2 cut(s) 190, 385
Asp700I GAANNNNTTC 2 cut(s) 504, 761
AspS9I GGNCC 4 cut(s) 173, 184, 347, 901
AsuC2I CCSGG 1 cut(s) 702
AvaII GGWCC 3 cut(s) 184, 347, 901
BaeGI GKGCMC 4 cut(s) 86, 470, 774, 1139
BamHI GGATCC 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 2 cut(s) 774, 1139
BbvI GCAGC 2 cut(s) 506, 1028
BccI CCATC 4 cut(s) 184, 228, 519, 527
BceAI ACGGC 1 cut(s) 11
BciT130I CCWGG 1 cut(s) 80
BcnI CCSGG 1 cut(s) 702
BcoDI GTCTC 3 cut(s) 34, 79, 1039
BfaI CTAG 3 cut(s) 669, 797, 882
BfmI CTRYAG 2 cut(s) 597, 723
BglII AGATCT 1 cut(s) 601
BisI GCNGC 3 cut(s) 495, 794, 1017
BlsI GCNGC 3 cut(s) 496, 795, 1018
Bme1390I CCNGG 2 cut(s) 80, 702
Bme18I GGWCC 3 cut(s) 184, 347, 901
BmgT120I GGNCC 4 cut(s) 173, 184, 347, 901
BmiI GGNNCC 4 cut(s) 9, 186, 674, 699
BmrFI CCNGG 2 cut(s) 80, 702
BmsI GCATC 1 cut(s) 577
BpiI GAAGAC 1 cut(s) 54
BpuMI CCSGG 1 cut(s) 702
BsaJI CCNNGG 3 cut(s) 78, 79, 1077
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 170, 444
Bse1I ACTGG 1 cut(s) 349
Bse3DI GCAATG 2 cut(s) 712, 822
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 3 cut(s) 78, 79, 1077
BseGI GGATG 1 cut(s) 592
BseLI CCNNNNNNNGG 3 cut(s) 56, 170, 444
BseMI GCAATG 2 cut(s) 712, 822
BseMII CTCAG 4 cut(s) 215, 297, 342, 923
BseNI ACTGG 1 cut(s) 349
BseSI GKGCMC 4 cut(s) 86, 470, 774, 1139
BseXI GCAGC 2 cut(s) 506, 1028
BsgI GTGCAG 1 cut(s) 81
BshFI GGCC 1 cut(s) 175
BsiHKAI GWGCWC 2 cut(s) 774, 1139
BsiSI CCGG 2 cut(s) 572, 701
BslFI GGGAC 1 cut(s) 170
BslI CCNNNNNNNGG 3 cut(s) 56, 170, 444
BsmAI GTCTC 3 cut(s) 34, 79, 1039
BsmBI CGTCTC 1 cut(s) 34
BsmFI GGGAC 1 cut(s) 170
BsmI GAATGC 2 cut(s) 496, 820
BsnI GGCC 1 cut(s) 175
Bsp1286I GDGCHC 4 cut(s) 86, 470, 774, 1139
Bsp1407I TGTACA 1 cut(s) 253
Bsp143I GATC 3 cut(s) 601, 697, 1072
Bsp19I CCATGG 1 cut(s) 1077
BspACI CCGC 1 cut(s) 794
BspANI GGCC 1 cut(s) 175
BspCNI CTCAG 4 cut(s) 216, 296, 343, 922
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 4 cut(s) 9, 186, 674, 699
BspPI GGATC 3 cut(s) 692, 705, 1067
BsrDI GCAATG 2 cut(s) 712, 822
BsrGI TGTACA 1 cut(s) 253
BsrI ACTGG 1 cut(s) 349
BssECI CCNNGG 3 cut(s) 78, 79, 1077
BssMI GATC 3 cut(s) 601, 697, 1072
BssT1I CCWWGG 1 cut(s) 1077
Bst2UI CCWGG 1 cut(s) 80
Bst4CI ACNGT 4 cut(s) 73, 115, 504, 901
BstAPI GCANNNNNTGC 1 cut(s) 304
BstAUI TGTACA 1 cut(s) 253
BstC8I GCNNGC 2 cut(s) 849, 1103
BstDEI CTNAG 6 cut(s) 224, 241, 283, 351, 909, 1178
BstDSI CCRYGG 1 cut(s) 1077
BstF5I GGATG 1 cut(s) 592
BstKTI GATC 3 cut(s) 604, 700, 1075
BstMAI GTCTC 3 cut(s) 34, 79, 1039
BstMBI GATC 3 cut(s) 601, 697, 1072
BstMWI GCNNNNNNNGC 1 cut(s) 304
BstNI CCWGG 1 cut(s) 80
BstSCI CCNGG 2 cut(s) 78, 700
BstSFI CTRYAG 2 cut(s) 597, 723
BstSLI GKGCMC 4 cut(s) 86, 470, 774, 1139
BstV1I GCAGC 2 cut(s) 506, 1028
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 2 cut(s) 601, 697
BstXI CCANNNNNNTGG 1 cut(s) 227
BstYI RGATCY 2 cut(s) 601, 697
BsuRI GGCC 1 cut(s) 175
BtgI CCRYGG 1 cut(s) 1077
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 1 cut(s) 592
BtsIMutI CAGTG 1 cut(s) 111
Cac8I GCNNGC 2 cut(s) 849, 1103
CciI TCATGA 1 cut(s) 508
Cfr13I GGNCC 4 cut(s) 173, 184, 347, 901
Csp6I GTAC 4 cut(s) 254, 457, 546, 913
CviAII CATG 6 cut(s) 170, 509, 916, 974, 1025, 1078
CviQI GTAC 4 cut(s) 254, 457, 546, 913
DdeI CTNAG 6 cut(s) 224, 241, 283, 351, 909, 1178
DpnI GATC 3 cut(s) 603, 699, 1074
DpnII GATC 3 cut(s) 601, 697, 1072
DrdI GACNNNNNNGTC 1 cut(s) 1053
DseDI GACNNNNNNGTC 1 cut(s) 1053
Eco130I CCWWGG 1 cut(s) 1077
Eco47I GGWCC 3 cut(s) 184, 347, 901
Eco57I CTGAAG 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 78
EcoT14I CCWWGG 1 cut(s) 1077
EcoT22I ATGCAT 1 cut(s) 822
ErhI CCWWGG 1 cut(s) 1077
Esp3I CGTCTC 1 cut(s) 34
FaeI CATG 6 cut(s) 173, 512, 919, 977, 1028, 1081
FaqI GGGAC 1 cut(s) 170
FatI CATG 6 cut(s) 169, 508, 915, 973, 1024, 1077
FblI GTMKAC 2 cut(s) 518, 832
Fnu4HI GCNGC 3 cut(s) 495, 794, 1017
FokI GGATG 1 cut(s) 599
Fsp4HI GCNGC 3 cut(s) 495, 794, 1017
FspBI CTAG 3 cut(s) 669, 797, 882
GluI GCNGC 3 cut(s) 495, 794, 1017
HaeIII GGCC 1 cut(s) 175
HapII CCGG 2 cut(s) 572, 701
Hin1II CATG 6 cut(s) 173, 512, 919, 977, 1028, 1081
HincII GTYRAC 1 cut(s) 317
HindII GTYRAC 1 cut(s) 317
HinfI GANTC 1 cut(s) 434
HpaII CCGG 2 cut(s) 572, 701
Hpy166II GTNNAC 8 cut(s) 254, 317, 519, 630, 666, 772, 833, 1137
Hpy188I TCNGA 3 cut(s) 225, 286, 1044
Hpy188III TCNNGA 4 cut(s) 31, 187, 475, 509
Hpy8I GTNNAC 8 cut(s) 254, 317, 519, 630, 666, 772, 833, 1137
HpyAV CCTTC 3 cut(s) 144, 174, 320
HpyCH4III ACNGT 4 cut(s) 73, 115, 504, 901
HpyF10VI GCNNNNNNNGC 1 cut(s) 304
HpyF3I CTNAG 6 cut(s) 224, 241, 283, 351, 909, 1178
Hsp92II CATG 6 cut(s) 173, 512, 919, 977, 1028, 1081
Kzo9I GATC 3 cut(s) 601, 697, 1072
LmnI GCTCC 1 cut(s) 13
Lsp1109I GCAGC 2 cut(s) 506, 1028
LweI GCATC 1 cut(s) 577
MaeI CTAG 3 cut(s) 669, 797, 882
MaeIII GTNAC 2 cut(s) 109, 712
MalI GATC 3 cut(s) 603, 699, 1074
MboI GATC 3 cut(s) 601, 697, 1072
MboII GAAGA 1 cut(s) 54
MfeI CAATTG 1 cut(s) 439
MflI RGATCY 2 cut(s) 601, 697
MhlI GDGCHC 4 cut(s) 86, 470, 774, 1139
MmeI TCCRAC 1 cut(s) 979
MnlI CCTC 5 cut(s) 49, 786, 812, 912, 1044
Mph1103I ATGCAT 1 cut(s) 822
MroXI GAANNNNTTC 2 cut(s) 504, 761
MseI TTAA 4 cut(s) 360, 389, 429, 1110
MslI CAYNNNNRTG 2 cut(s) 225, 765
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 2 cut(s) 572, 701
MspR9I CCNGG 2 cut(s) 80, 702
MunI CAATTG 1 cut(s) 439
Mva1269I GAATGC 2 cut(s) 496, 820
MvaI CCWGG 1 cut(s) 80
MwoI GCNNNNNNNGC 1 cut(s) 304
NciI CCSGG 1 cut(s) 702
NcoI CCATGG 1 cut(s) 1077
NdeII GATC 3 cut(s) 601, 697, 1072
NlaIII CATG 6 cut(s) 173, 512, 919, 977, 1028, 1081
NlaIV GGNNCC 4 cut(s) 9, 186, 674, 699
NmuCI GTSAC 1 cut(s) 109
NsiI ATGCAT 1 cut(s) 822
PagI TCATGA 1 cut(s) 508
PasI CCCWGGG 1 cut(s) 79
PcsI WCGNNNNNNNCGW 1 cut(s) 185
PctI GAATGC 2 cut(s) 496, 820
PdmI GAANNNNTTC 2 cut(s) 504, 761
PfeI GAWTC 1 cut(s) 434
PflMI CCANNNNNTGG 2 cut(s) 56, 444
PkrI GCNGC 3 cut(s) 496, 795, 1018
Psp6I CCWGG 1 cut(s) 78
PspGI CCWGG 1 cut(s) 78
PspN4I GGNNCC 4 cut(s) 9, 186, 674, 699
PspPI GGNCC 4 cut(s) 173, 184, 347, 901
PsuI RGATCY 2 cut(s) 601, 697
PvuII CAGCTG 1 cut(s) 497
RsaI GTAC 4 cut(s) 255, 458, 547, 914
RsaNI GTAC 4 cut(s) 254, 457, 546, 913
RseI CAYNNNNRTG 2 cut(s) 225, 765
SaqAI TTAA 4 cut(s) 360, 389, 429, 1110
SatI GCNGC 3 cut(s) 495, 794, 1017
Sau3AI GATC 3 cut(s) 601, 697, 1072
Sau96I GGNCC 4 cut(s) 173, 184, 347, 901
ScrFI CCNGG 2 cut(s) 80, 702
SduI GDGCHC 4 cut(s) 86, 470, 774, 1139
SfaNI GCATC 1 cut(s) 577
SfcI CTRYAG 2 cut(s) 597, 723
SinI GGWCC 3 cut(s) 184, 347, 901
SmiMI CAYNNNNRTG 2 cut(s) 225, 765
SsiI CCGC 1 cut(s) 794
SspMI CTAG 3 cut(s) 669, 797, 882
StyD4I CCNGG 2 cut(s) 78, 700
StyI CCWWGG 1 cut(s) 1077
TaaI ACNGT 4 cut(s) 73, 115, 504, 901
TaqI TCGA 3 cut(s) 32, 474, 765
TatI WGTACW 2 cut(s) 253, 912
TauI GCSGC 1 cut(s) 796
TfiI GAWTC 1 cut(s) 434
Tru1I TTAA 4 cut(s) 360, 389, 429, 1110
Tru9I TTAA 4 cut(s) 360, 389, 429, 1110
TscAI CASTG 1 cut(s) 118
TseFI GTSAC 1 cut(s) 109
TseI GCWGC 2 cut(s) 494, 1016
Tsp45I GTSAC 1 cut(s) 109
TspDTI ATGAA 5 cut(s) 17, 126, 497, 525, 990
TspGWI ACGGA 1 cut(s) 999
TspRI CASTG 1 cut(s) 118
Van91I CCANNNNNTGG 2 cut(s) 56, 444
VneI GTGCAC 2 cut(s) 770, 1135
VpaK11BI GGWCC 3 cut(s) 184, 347, 901
XapI RAATTY 2 cut(s) 190, 385
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmiI GTMKAC 2 cut(s) 518, 832
XmnI GAANNNNTTC 2 cut(s) 504, 761
XspI CTAG 3 cut(s) 669, 797, 882
Zsp2I ATGCAT 1 cut(s) 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.