Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003328

Physical Location & Seq

Genomic Coordinates Reverse (-)

15264144 .. 15269689

Gene Structure 5546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g12230.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGCCATTTGAAATAATCGATCAAAGGGGTGTATCTGTCTCTTCTCACTTCTTTGAAGAAATCCCTTTTCCTGCTGAGAGACAAGTCGGATTTCAGAAGCTGAAAACCATGCCCGATTACCAAGCGGGAGTCAGTGGAATGGTACCGACACCTGGCAGCACGTTGGGTTCTTCAATGCCATCAAAAATGTATTTACCAAACGGGGCACTGTCGGTGGATTCCTTGGATCCCCCACAATCCAATCTGGCTGGGGAGCAAACAGAAAGGCTAAGCGTTGTTGAAGGAATTCCCAACATCTCCAAGGCCTCATGGAAACCTATGGATCACCAACCAAAATTGTGGTCAGACTTGTCCGCAAAGCCAACACCTTATAGCTCGGTTGGCGGCAAAACTCTCATTCCTGGTGCCCAGCATGAAAGTAGTCTGTTCTCAAGCTCTTTGTCCGAAACTTTTAGCAAAAAGTTGCGATTACTGAAGAATGATTTTATATCTCATCAGTCTACTGATAATGTTGCCTTCCAACATGAGGAAGAACCCTTTGAATCTCTTGAAGAAATTGAGGCACAAACAATTGGAAATCTCCTTCCAGATGACAATGACTTGTTTTCTGGCATGACAGATGAGCCGGGTTATAAGGCTTATGCTAATATTGGTGATGGATTTGAAGATTTTGATCTCTTTAGCAGCAGTGGTGGCTTGGAAATGGAAGGAGATGATCAAGGGGTTTATAATAGCTCAATTGCGGGTGAACACCCTTATGGCGAACACCCTTCCCGTACACTTTTTGTTCGCAATATTAATAGCAACATTGAAGATTTGGAATTGAAGGCTCTTTTTGAGCAATATGGAGATATTCGGGCACTTTACACTGCCTGCAAGCATCGTGGGTTTGTTATGATTTCTTATTATGATATAAGGGCTGCCCAAAATGCACTAAGAGCACTTCAAAGTAAGGCACTGAGGCATAGGAAGCTTGACATACATTATTCGATACCCAAGGACAATCCTTCTGATAAAGATATTAACCAAGGAACGCTAGTTTTATTCAACCTTGATTCTTCTGTTTCTAGTGACGAGCTTTCTAAAATTTTTGGATCCTATGGAGAAATTAAAGAAATCCGTGAGACTCCACACAAGCCTCATAACAAGTTCATAGAGTTTTATGATGTTAGAGCCGCAGAAGCTGCTCTCCATGCTTTGAATAGGAGTGAGATTGGAGGAAAGCAGATCAAGCTTGAACCGAGCCGTCCAGGGGGCATAAGGAGGGGTTTGGCTCAAGTTTCCGAGCGGGACCGGGATGAATTCAAATTTTGTAATGGTTTGTCTGACAATTTATCAACAGGCACCAAGGCAACGCTTCATCCTGGAATGGTCACATCAAGCTGCATGGTTAATGGATCTAGCCTGGGCTTACATTCTGCTGTCCGTTCACCTGTGAGTGCATTTATTGAAAACGCTTTATCTCATCAGAGTTCAAGTGTTCCAGATGCCTTTCCCGCTCCAGCAACATTGGCATCTATAGGGAAAAAGTTTAGCCTTCGTGATACTGAACAGTCTCTGGATGACATGAATTTTGGTAATCAGAGTGCTCCCGGCATACATCCTCATTCGCTTCCTGAGTATAATGACAGTTTAGCCCATGGTATTCCATGCAACACTTCTGGTGCTATTGGAATCATAAATGGCAATCTGGGACTTAGAATGAGAGAAGGAACAGACCGAAGATCCACTGTCAGTGCAAATGGTCACCTAGTGGAACTGAACGGAGGAGCTTTTGGATCTCCTGGAAATGGGAGCTGCCCGGTCCATGCTCATCCCTATCTTTGGAATAACTCCAACTCGTACCAGCAGCATCCTTCAAGTCCTATGATGTGGCAGAATTCACCATCATTTATCAGTGGTCATAGTGCGCATCGCTTTCCCCAAATGCCAGGATTCCACAGGACACCACCTCATATGCTGAGTGGTACATCGCCTGTGCACCTCCATGTAGGATCAGCTCCAGCTGTTAACCCTTCCATTTGGGAAAAGCATGCCTTTTCAGGGGAGTCTCCTGACACATCTAATCTTCACTTGGGTTCTCTTGGCTTTCCACGTTTTGCTGGTAGTCCCCAGATGCATCCTATGGAGATTTCTTCACAAAACCTCTTTTCTCTTACTGGTGGAAATTTCTTGGACATGACTACCAGTACCCGGCAGCGCTCTTCACAGGAGATGGGCCACATGTTTCCTGGTAGGAATTCAATGAGTTCAATGCCTACCTCTTTTGACTCTCAAAACGAACGTGGTGTTAGAAACCTGTCTCACCGAAGAAATGAAGCAAATCCTAACAATGCTGATAAGAGACAATATGAGCTTGATGTTGAACGTATACTCTGTGGGGAAGACAGACGCACCACGTTGATGATCAAGAACATTCCCAACAAATATACTTCAAAGATGCTTCTTGCTGCAATTGATGAGCAGTGTCGAGGAATTTATGACTTTCTTTATTTGCCAATCGACTTCAAGAACAAATGCAATGTGGGATATGCGTTCATCAACATGATTGATCCTCATCAGATTGTTCCGTTCTATAAGGCATTCAATGGAAAAAAATGGGAGAAGTTTAACAGTGAAAAGGTGGCATCACTTGCGTATGCTCGTATTCAGGGTAAAGCTGCTCTTATTGCCCATTTCCAGAACTCAAGCTTAATGAACGAGGACAAACGCTGCCGTCCCATACTTTTCCACACAGAGGGTCCAAATGCTGGTGATCCGGAACCCTTCCCCATGGGTACCAACATCAGATCAAGACCAGGAAAACCTCGAACAGCCGGCTACGATGATAACCATAATCACGGGAGCCCTTCAGCAACTGCAAACGGAGAGGAAAATTCCAAGGAATCCGACCGAGACTTGTTCTACCAAGATTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

973

Amino Acids

107.26

Weight (kDa)

6.08

Isoelectric Point (pI)

52.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07290 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960
fragaria_vesca	FvH4_5g09460
malus_domestica	MD06G1131000.v1.1 MD14G1147600.v1.1
prunus_persica	Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1
pyrus_communis	pycom06g12260 pycom14g12230
rosa_chinensis	RchiOBHm_Chr7g0188731
rosa_laevigata	RLG00000004666
rosa_multiflora	Rmu_sc0003854.1_g000006
rosa_roxburghii	Rroxscaffold_3G00266090
rosa_rugosa	Rorug06G0493200.1 Rorug06G0493300.1 Rorug06G0493400 Rorug06G0493400 Rorug06G0493500
rosa_samantha	Rh7AG098000 Rh7BG099400 Rh7CG101200 Rh7DG099800
rosa_wichuraiana	Rw7G008440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	633, 729
Acc16I	TGCGCA	1 cut(s)	1911
Acc65I	GGTACC	2 cut(s)	142, 2777
AccB1I	GGYRCC	4 cut(s)	142, 404, 1343, 2777
AccB7I	CCANNNNNTGG	1 cut(s)	2750
AccBSI	CCGCTC	2 cut(s)	1288, 1499
AccI	GTMKAC	2 cut(s)	500, 2371
AccIII	TCCGGA	1 cut(s)	2758
AciI	CCGC	7 cut(s)	125, 354, 384, 743, 1176, 1288, 1497
AcuI	CTGAAG	2 cut(s)	494, 2835
AdeI	CACNNNGTG	1 cut(s)	1753
AfaI	GTAC	6 cut(s)	144, 778, 1844, 1969, 2191, 2779
AfeI	AGCGCT	1 cut(s)	2201
AfiI	CCNNNNNNNGG	9 cut(s)	152, 526, 1252, 1790, 1824, 2043, 2193, 2737, 2750
AflIII	ACRYGT	1 cut(s)	2223
AjnI	CCWGG	9 cut(s)	151, 400, 1249, 1363, 1404, 1783, 1930, 2230, 2797
Alw21I	GWGCWC	3 cut(s)	943, 1591, 1983
Alw26I	GTCTC	8 cut(s)	43, 73, 1118, 1560, 2055, 2307, 2338, 2889
Alw44I	GTGCAC	1 cut(s)	1979
AlwNI	CAGNNNCTG	4 cut(s)	100, 1184, 1558, 2858
Aor13HI	TCCGGA	1 cut(s)	2758
Aor51HI	AGCGCT	1 cut(s)	2201
AoxI	GGCC	2 cut(s)	303, 2218
ApaLI	GTGCAC	1 cut(s)	1979
ArsI	GACNNNNNNTTYG	4 cut(s)	326, 358, 1556, 1588
AseI	ATTAAT	1 cut(s)	798
Asp700I	GAANNNNTTC	1 cut(s)	285
Asp718I	GGTACC	2 cut(s)	142, 2777
AspLEI	GCGC	2 cut(s)	1912, 2202
AspS9I	GGNCC	4 cut(s)	1291, 1804, 2218, 2741
AsuC2I	CCSGG	5 cut(s)	627, 1295, 1593, 1802, 2194
AsuHPI	GGTGA	8 cut(s)	317, 665, 758, 1422, 1739, 1875, 2297, 2765
AvaII	GGWCC	3 cut(s)	1291, 1804, 2741
BaeGI	GKGCMC	4 cut(s)	208, 409, 862, 1983
BamHI	GGATCC	2 cut(s)	226, 1094
BanI	GGYRCC	4 cut(s)	142, 404, 1343, 2777
BanII	GRGCYC	1 cut(s)	2849
BbsI	GAAGAC	1 cut(s)	2391
Bbv12I	GWGCWC	3 cut(s)	943, 1591, 1983
BccI	CCATC	4 cut(s)	187, 650, 1894, 2209
BceAI	ACGGC	2 cut(s)	1230, 2700
BciT130I	CCWGG	9 cut(s)	153, 402, 1251, 1365, 1406, 1785, 1932, 2232, 2799
BclI	TGATCA	2 cut(s)	715, 2406
BcnI	CCSGG	5 cut(s)	627, 1295, 1593, 1802, 2194
BcoDI	GTCTC	8 cut(s)	43, 73, 1118, 1560, 2055, 2307, 2338, 2889
BfaI	CTAG	4 cut(s)	1037, 1068, 1401, 1751
BfmI	CTRYAG	1 cut(s)	1518
BfoI	RGCGCY	1 cut(s)	2203
BlpI	GCTNAGC	1 cut(s)	269
Bme18I	GGWCC	3 cut(s)	1291, 1804, 2741
BmgT120I	GGNCC	4 cut(s)	1291, 1804, 2218, 2741
BmsI	GCATC	9 cut(s)	889, 1477, 1523, 1861, 1921, 2106, 2128, 2430, 2636
BpiI	GAAGAC	1 cut(s)	2391
BpmI	CTGGAG	2 cut(s)	1485, 1986
Bpu1102I	GCTNAGC	1 cut(s)	269
BpuEI	CTTGAG	3 cut(s)	415, 1260, 2671
BpuMI	CCSGG	5 cut(s)	627, 1295, 1593, 1802, 2194
Bsa29I	ATCGAT	1 cut(s)	18
BsaBI	GATNNNNATC	2 cut(s)	672, 2556
BsaWI	WCCGGW	1 cut(s)	2758
Bsc4I	CCNNNNNNNGG	9 cut(s)	152, 526, 1252, 1790, 1824, 2043, 2193, 2737, 2750
Bse118I	RCCGGY	1 cut(s)	2816
Bse1I	ACTGG	2 cut(s)	2164, 2187
Bse3DI	GCAATG	1 cut(s)	2527
Bse8I	GATNNNNATC	2 cut(s)	672, 2556
BseAI	TCCGGA	1 cut(s)	2758
BseBI	CCWGG	9 cut(s)	153, 402, 1251, 1365, 1406, 1785, 1932, 2232, 2799
BseCI	ATCGAT	1 cut(s)	18
BseGI	GGATG	7 cut(s)	1303, 1360, 1567, 1600, 1813, 1852, 2119
BseJI	GATNNNNATC	2 cut(s)	672, 2556
BseLI	CCNNNNNNNGG	9 cut(s)	152, 526, 1252, 1790, 1824, 2043, 2193, 2737, 2750
BseMI	GCAATG	1 cut(s)	2527
BseMII	CTCAG	4 cut(s)	66, 950, 1608, 1952
BseNI	ACTGG	2 cut(s)	2164, 2187
BseRI	GAGGAG	1 cut(s)	1782
BseSI	GKGCMC	4 cut(s)	208, 409, 862, 1983
BseYI	CCCAGC	2 cut(s)	248, 408
Bsh1285I	CGRYCG	1 cut(s)	2893
BshFI	GGCC	2 cut(s)	305, 2220
BshNI	GGYRCC	4 cut(s)	142, 404, 1343, 2777
BshVI	ATCGAT	1 cut(s)	18
BsiEI	CGRYCG	1 cut(s)	2893
BsiHKAI	GWGCWC	3 cut(s)	943, 1591, 1983
BsiSI	CCGG	7 cut(s)	626, 1294, 1593, 1802, 2194, 2759, 2817
BslFI	GGGAC	4 cut(s)	1304, 1707, 2094, 2703
BslI	CCNNNNNNNGG	9 cut(s)	152, 526, 1252, 1790, 1824, 2043, 2193, 2737, 2750
BsmAI	GTCTC	8 cut(s)	43, 73, 1118, 1560, 2055, 2307, 2338, 2889
BsmFI	GGGAC	4 cut(s)	1304, 1707, 2094, 2703
BsmI	GAATGC	1 cut(s)	2582
BsnI	GGCC	2 cut(s)	305, 2220
Bsp1286I	GDGCHC	7 cut(s)	208, 409, 862, 943, 1591, 1983, 2849
Bsp13I	TCCGGA	1 cut(s)	2758
Bsp1720I	GCTNAGC	1 cut(s)	269
Bsp19I	CCATGG	2 cut(s)	1639, 2772
BspACI	CCGC	7 cut(s)	125, 354, 384, 743, 1176, 1288, 1497
BspANI	GGCC	2 cut(s)	305, 2220
BspCNI	CTCAG	4 cut(s)	67, 951, 1609, 1953
BspDI	ATCGAT	1 cut(s)	18
BspEI	TCCGGA	1 cut(s)	2758
BspQI	GCTCTTC	1 cut(s)	2209
BspT107I	GGYRCC	4 cut(s)	142, 404, 1343, 2777
BsrBI	CCGCTC	2 cut(s)	1288, 1499
BsrDI	GCAATG	1 cut(s)	2527
BsrFI	RCCGGY	1 cut(s)	2816
BsrI	ACTGG	2 cut(s)	2164, 2187
BssAI	RCCGGY	1 cut(s)	2816
BssNAI	GTATAC	1 cut(s)	2372
BssT1I	CCWWGG	8 cut(s)	222, 300, 996, 1027, 1347, 1639, 2772, 2880
Bst1107I	GTATAC	1 cut(s)	2372
Bst2UI	CCWGG	9 cut(s)	153, 402, 1251, 1365, 1406, 1785, 1932, 2232, 2799
Bst4CI	ACNGT	5 cut(s)	210, 1554, 1631, 1732, 2615
Bst6I	CTCTTC	2 cut(s)	46, 2209
BstAPI	GCANNNNNTGC	2 cut(s)	1184, 2633
BstC8I	GCNNGC	4 cut(s)	874, 878, 2034, 2818
BstDEI	CTNAG	7 cut(s)	75, 269, 935, 959, 1617, 1697, 1961
BstDSI	CCRYGG	2 cut(s)	1639, 2772
BstEII	GGTNACC	1 cut(s)	1745
BstF5I	GGATG	7 cut(s)	1303, 1360, 1567, 1600, 1813, 1852, 2119
BstH2I	RGCGCY	1 cut(s)	2203
BstHHI	GCGC	2 cut(s)	1912, 2202
BstMAI	GTCTC	8 cut(s)	43, 73, 1118, 1560, 2055, 2307, 2338, 2889
BstMCI	CGRYCG	1 cut(s)	2893
BstNI	CCWGG	9 cut(s)	153, 402, 1251, 1365, 1406, 1785, 1932, 2232, 2799
BstNSI	RCATGY	2 cut(s)	2036, 2227
BstPI	GGTNACC	1 cut(s)	1745
BstSFI	CTRYAG	1 cut(s)	1518
BstSLI	GKGCMC	4 cut(s)	208, 409, 862, 1983
BstV2I	GAAGAC	1 cut(s)	2391
BstX2I	RGATCY	5 cut(s)	226, 1094, 1397, 1724, 1778
BstXI	CCANNNNNNTGG	1 cut(s)	339
BstYI	RGATCY	5 cut(s)	226, 1094, 1397, 1724, 1778
BstZ17I	GTATAC	1 cut(s)	2372
Bsu15I	ATCGAT	1 cut(s)	18
BsuRI	GGCC	2 cut(s)	305, 2220
BsuTUI	ATCGAT	1 cut(s)	18
BtgI	CCRYGG	2 cut(s)	1639, 2772
BtgZI	GCGATG	2 cut(s)	1898, 1956
BtsCI	GGATG	7 cut(s)	1303, 1360, 1567, 1600, 1813, 1852, 2119
BtsI	GCAGTG	3 cut(s)	694, 867, 2471
Cac8I	GCNNGC	4 cut(s)	874, 878, 2034, 2818
CaiI	CAGNNNCTG	4 cut(s)	100, 1184, 1558, 2858
CfoI	GCGC	2 cut(s)	1912, 2202
Cfr10I	RCCGGY	1 cut(s)	2816
Cfr13I	GGNCC	4 cut(s)	1291, 1804, 2218, 2741
ClaI	ATCGAT	1 cut(s)	18
CseI	GACGC	1 cut(s)	2400
Csp6I	GTAC	6 cut(s)	143, 777, 1843, 1968, 2190, 2778
CspCI	CAANNNNNGTGG	2 cut(s)	865, 900
CviQI	GTAC	6 cut(s)	143, 777, 1843, 1968, 2190, 2778
DdeI	CTNAG	7 cut(s)	75, 269, 935, 959, 1617, 1697, 1961
DraIII	CACNNNGTG	1 cut(s)	1753
Eam1104I	CTCTTC	2 cut(s)	46, 2209
EarI	CTCTTC	2 cut(s)	46, 2209
Eco130I	CCWWGG	8 cut(s)	222, 300, 996, 1027, 1347, 1639, 2772, 2880
Eco147I	AGGCCT	1 cut(s)	305
Eco24I	GRGCYC	1 cut(s)	2849
Eco47I	GGWCC	3 cut(s)	1291, 1804, 2741
Eco47III	AGCGCT	1 cut(s)	2201
Eco57I	CTGAAG	2 cut(s)	494, 2835
Eco91I	GGTNACC	1 cut(s)	1745
EcoO65I	GGTNACC	1 cut(s)	1745
EcoRI	GAATTC	4 cut(s)	285, 1301, 1879, 2239
EcoRII	CCWGG	9 cut(s)	151, 400, 1249, 1363, 1404, 1783, 1930, 2230, 2797
EcoT14I	CCWWGG	8 cut(s)	222, 300, 996, 1027, 1347, 1639, 2772, 2880
EcoT22I	ATGCAT	1 cut(s)	2121
EcoT38I	GRGCYC	1 cut(s)	2849
ErhI	CCWWGG	8 cut(s)	222, 300, 996, 1027, 1347, 1639, 2772, 2880
FalI	AAGNNNNNCTT	4 cut(s)	2021, 2053, 2649, 2681
FaqI	GGGAC	4 cut(s)	1304, 1707, 2094, 2703
FauI	CCCGC	4 cut(s)	118, 736, 1281, 1504
FauNDI	CATATG	1 cut(s)	1956
FbaI	TGATCA	2 cut(s)	715, 2406
FblI	GTMKAC	2 cut(s)	500, 2371
FokI	GGATG	7 cut(s)	1310, 1347, 1574, 1587, 1800, 1839, 2106
FriOI	GRGCYC	1 cut(s)	2849
FspAI	RTGCGCAY	1 cut(s)	1911
FspBI	CTAG	4 cut(s)	1037, 1068, 1401, 1751
FspI	TGCGCA	1 cut(s)	1911
GlaI	GCGC	2 cut(s)	1911, 2201
GsaI	CCCAGC	2 cut(s)	252, 412
GsuI	CTGGAG	2 cut(s)	1485, 1986
HaeII	RGCGCY	1 cut(s)	2203
HaeIII	GGCC	2 cut(s)	305, 2220
HapII	CCGG	7 cut(s)	626, 1294, 1593, 1802, 2194, 2759, 2817
HgaI	GACGC	1 cut(s)	2400
HhaI	GCGC	2 cut(s)	1912, 2202
Hin6I	GCGC	2 cut(s)	1910, 2200
HinP1I	GCGC	2 cut(s)	1910, 2200
HincII	GTYRAC	1 cut(s)	2011
HindII	GTYRAC	1 cut(s)	2011
HindIII	AAGCTT	3 cut(s)	971, 1232, 2689
HpaI	GTTAAC	1 cut(s)	2011
HpaII	CCGG	7 cut(s)	626, 1294, 1593, 1802, 2194, 2759, 2817
HphI	GGTGA	8 cut(s)	317, 665, 758, 1422, 1739, 1875, 2297, 2765
Hpy166II	GTNNAC	7 cut(s)	501, 749, 779, 1430, 1981, 2011, 2372
Hpy8I	GTNNAC	7 cut(s)	501, 749, 779, 1430, 1981, 2011, 2372
HpyCH4III	ACNGT	5 cut(s)	210, 1554, 1631, 1732, 2615
HpyCH4IV	ACGT	5 cut(s)	161, 2095, 2284, 2368, 2399
HpyF3I	CTNAG	7 cut(s)	75, 269, 935, 959, 1617, 1697, 1961
HpySE526I	ACGT	5 cut(s)	161, 2095, 2284, 2368, 2399
HspAI	GCGC	2 cut(s)	1910, 2200
Kpn2I	TCCGGA	1 cut(s)	2758
KpnI	GGTACC	2 cut(s)	146, 2781
KroI	GCCGGC	1 cut(s)	2816
KroNI	GCCGGC	1 cut(s)	2818
Ksp22I	TGATCA	2 cut(s)	715, 2406
KspAI	GTTAAC	1 cut(s)	2011
LguI	GCTCTTC	1 cut(s)	2209
LmnI	GCTCC	7 cut(s)	253, 1504, 1594, 1769, 1794, 2005, 2844
LweI	GCATC	9 cut(s)	889, 1477, 1523, 1861, 1921, 2106, 2128, 2430, 2636
MaeI	CTAG	4 cut(s)	1037, 1068, 1401, 1751
MaeII	ACGT	5 cut(s)	161, 2095, 2284, 2368, 2399
MaeIII	GTNAC	3 cut(s)	1070, 1372, 1745
MbiI	CCGCTC	2 cut(s)	1288, 1499
MfeI	CAATTG	3 cut(s)	570, 738, 2454
MflI	RGATCY	5 cut(s)	226, 1094, 1397, 1724, 1778
MhlI	GDGCHC	7 cut(s)	208, 409, 862, 943, 1591, 1983, 2849
MlyI	GAGTC	4 cut(s)	138, 1120, 2057, 2264
MmeI	TCCRAC	4 cut(s)	67, 544, 1860, 2913
Mph1103I	ATGCAT	1 cut(s)	2121
MroI	TCCGGA	1 cut(s)	2758
MroNI	GCCGGC	1 cut(s)	2816
MroXI	GAANNNNTTC	1 cut(s)	285
MseI	TTAA	7 cut(s)	798, 1023, 1110, 1392, 2010, 2610, 2693
MslI	CAYNNNNRTG	4 cut(s)	756, 1986, 2402, 2543
MspA1I	CMGCKG	1 cut(s)	2006
MspI	CCGG	7 cut(s)	626, 1294, 1593, 1802, 2194, 2759, 2817
MunI	CAATTG	3 cut(s)	570, 738, 2454
Mva1269I	GAATGC	1 cut(s)	2582
MvaI	CCWGG	9 cut(s)	153, 402, 1251, 1365, 1406, 1785, 1932, 2232, 2799
NaeI	GCCGGC	1 cut(s)	2818
NciI	CCSGG	5 cut(s)	627, 1295, 1593, 1802, 2194
NcoI	CCATGG	2 cut(s)	1639, 2772
NdeI	CATATG	1 cut(s)	1956
NgoMIV	GCCGGC	1 cut(s)	2816
NmuCI	GTSAC	3 cut(s)	1070, 1372, 1745
NsbI	TGCGCA	1 cut(s)	1911
NsiI	ATGCAT	1 cut(s)	2121
NspI	RCATGY	2 cut(s)	2036, 2227
PaeI	GCATGC	1 cut(s)	2036
PceI	AGGCCT	1 cut(s)	305
PciI	ACATGT	1 cut(s)	2223
PciSI	GCTCTTC	1 cut(s)	2209
PctI	GAATGC	1 cut(s)	2582
PdiI	GCCGGC	1 cut(s)	2818
PdmI	GAANNNNTTC	1 cut(s)	285
PfeI	GAWTC	6 cut(s)	218, 542, 1055, 1674, 1935, 2885
PflMI	CCANNNNNTGG	1 cut(s)	2750
PfoI	TCCNGGA	2 cut(s)	1363, 1783
PleI	GAGTC	4 cut(s)	137, 1120, 2056, 2264
PpsI	GAGTC	4 cut(s)	137, 1120, 2056, 2264
PscI	ACATGT	1 cut(s)	2223
PshBI	ATTAAT	1 cut(s)	798
PsiI	TTATAA	2 cut(s)	633, 729
Psp6I	CCWGG	9 cut(s)	151, 400, 1249, 1363, 1404, 1783, 1930, 2230, 2797
PspEI	GGTNACC	1 cut(s)	1745
PspFI	CCCAGC	2 cut(s)	248, 408
PspGI	CCWGG	9 cut(s)	151, 400, 1249, 1363, 1404, 1783, 1930, 2230, 2797
PspPI	GGNCC	4 cut(s)	1291, 1804, 2218, 2741
PstNI	CAGNNNCTG	4 cut(s)	100, 1184, 1558, 2858
PsuI	RGATCY	5 cut(s)	226, 1094, 1397, 1724, 1778
PvuII	CAGCTG	1 cut(s)	2006
RsaI	GTAC	6 cut(s)	144, 778, 1844, 1969, 2191, 2779
RsaNI	GTAC	6 cut(s)	143, 777, 1843, 1968, 2190, 2778
RseI	CAYNNNNRTG	4 cut(s)	756, 1986, 2402, 2543
SapI	GCTCTTC	1 cut(s)	2209
SaqAI	TTAA	7 cut(s)	798, 1023, 1110, 1392, 2010, 2610, 2693
Sau96I	GGNCC	4 cut(s)	1291, 1804, 2218, 2741
SchI	GAGTC	4 cut(s)	138, 1120, 2057, 2264
SduI	GDGCHC	7 cut(s)	208, 409, 862, 943, 1591, 1983, 2849
SfaNI	GCATC	9 cut(s)	889, 1477, 1523, 1861, 1921, 2106, 2128, 2430, 2636
SfcI	CTRYAG	1 cut(s)	1518
SinI	GGWCC	3 cut(s)	1291, 1804, 2741
SmiMI	CAYNNNNRTG	4 cut(s)	756, 1986, 2402, 2543
SmlI	CTYRAG	3 cut(s)	430, 1275, 2686
SmoI	CTYRAG	3 cut(s)	430, 1275, 2686
SphI	GCATGC	1 cut(s)	2036
SseBI	AGGCCT	1 cut(s)	305
SsiI	CCGC	7 cut(s)	125, 354, 384, 743, 1176, 1288, 1497
SspI	AATATT	2 cut(s)	649, 796
SspMI	CTAG	4 cut(s)	1037, 1068, 1401, 1751
StuI	AGGCCT	1 cut(s)	305
StyI	CCWWGG	8 cut(s)	222, 300, 996, 1027, 1347, 1639, 2772, 2880
TaaI	ACNGT	5 cut(s)	210, 1554, 1631, 1732, 2615
TaiI	ACGT	5 cut(s)	164, 2098, 2287, 2371, 2402
TaqI	TCGA	5 cut(s)	18, 989, 2470, 2502, 2809
TaqII	GACCGA	2 cut(s)	1734, 2907
TauI	GCSGC	2 cut(s)	387, 1178
TfiI	GAWTC	6 cut(s)	218, 542, 1055, 1674, 1935, 2885
Tru1I	TTAA	7 cut(s)	798, 1023, 1110, 1392, 2010, 2610, 2693
Tru9I	TTAA	7 cut(s)	798, 1023, 1110, 1392, 2010, 2610, 2693
TseFI	GTSAC	3 cut(s)	1070, 1372, 1745
Tsp45I	GTSAC	3 cut(s)	1070, 1372, 1745
TspDTI	ATGAA	8 cut(s)	429, 1141, 1314, 1349, 1583, 2331, 2527, 2711
TspGWI	ACGGA	5 cut(s)	1109, 1415, 1779, 2559, 2880
Van91I	CCANNNNNTGG	1 cut(s)	2750
VneI	GTGCAC	1 cut(s)	1979
VpaK11BI	GGWCC	3 cut(s)	1291, 1804, 2741
VspI	ATTAAT	1 cut(s)	798
XceI	RCATGY	2 cut(s)	2036, 2227
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2228
XmiI	GTMKAC	2 cut(s)	500, 2371
XmnI	GAANNNNTTC	1 cut(s)	285
XspI	CTAG	4 cut(s)	1037, 1068, 1401, 1751
Zsp2I	ATGCAT	1 cut(s)	2121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.