Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0003328

Physical Location & Seq

Genomic Coordinates Reverse (-)

7590955 .. 7599885

Gene Structure 8931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG101200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGCCACAATCCAATCTGGCTGGGGAGCGCACAGAAAGGCTAAGCATTAGTGGAGGAGTTGCCAATACATCCAAGGCCTCGTGGAGACCTATGAATCATCATCCAAAGTTGTGGTCAGACTTGCCCACACGGCCAACATCCCATAGCTTGGTTGGAAGCAAAACTGCTATTAATGGTGCTCAGCATGAAAGCAGTCTGTTCTCAAGCTCATTGTCTGAAATTTTTACTAGAAAATTGAGATTGCTAAAGGGTGATTTTGTATCTCATCAATCTACAAATACTGTTGCTTCCCAACATGAGGAAGAGCCCTTTGAATCGCTTGAAGAAATGGAAGCACAAACCATTGGAAATCTCCTTCCTGATGAAAATGATTTGTTTTCTGGCATGATAGATGGTCCGGGTAAAATTGTGCATGGTAGTAATGGGGATGAATTGGAAGATTTTGATCTTTTTAGCAGTGGTGGCGGCATGGAATTAGAAGGAGACGATCAAGGGGGTGGTAATTTTTCACTTGTGGGTGAACACCCCTATGGCGAGCACCCTTCTAGAACACTTTTTGTTCGAAATATTAATAGCAATGTTGAAGATTTGGAATTGAAGGATCTTTTTGAGCAATATGGAGATATCCGAACACTTTACACAGCCTGCAAGCATCGTGGGTTTGTTATGATTTCTTATTATGATATAAGGGCTGCCCAAAAAGCGATAAGAGCACTACAGAGTAAGCCACTGAGGCGTAGGAAGCTTGACATACACTATTCGATACCCAAGGACAACCCTTCTGATAAAGATGTTAACCAAGGAACACTTGAGGTATACAATGTTGATTCTTCTGTTTCTGATGATGAGCTTACTAAACTTTTTGAATCTTATGGGGAAATCAAAGAGATCCGCGAGGCTCCAAACAAGAGTCATAACAAGTTGATAGAATTTTATGATGTTAGAGCTGCAGAAGCTGCTCTTCATGCATTGAATACGAGTGAGATTGGTGGGAAGCAGATCAAGCTTGAACCCAGCCATCCAGGGGTTGCCAGAATGGGTTTCGGTCAAGGTTCCAAGCAGGAGCAAGATGAATTTAATATTTGTCATAGTCCATCCGACAACTTATCAGCAGGATGCAAGGCAACTCTTCATCCTGGAATGGCTAATGAATCTAACCTGGGATTACATTCTTCAATTCGATCACCTTCCAATGCATTTATGGGAAATGCTTTAGCGCATCTGAGTTCAAGTGTTCCGCGTACCTTGCCCTCTCCGATGAGAGTGGTGTCTGCGGACAAAAACTTTTGCCTTCCTGATTCCAATCACTCTCTGAATGAAATTAAGTTTGGTAACCAGTGCGTTCCCAATTTCCATCCGCATTCCCTCCCTGAGTATCATGACAGTTTAGCTCATGGTATCACATCCAACTCCAGTGGAGTGGCTGGCAATGTGGGCCTTAGAATGACAGAAGGAACCGACAGGAGGCACATTCGTGAAATGAATGCAAATGGGCACCTGATGGAACTGAACGGAGGAGGAGCTTTTGCATCTTCTGGAAATGGGAGTGCTGGGGTTCGCGGACATCATTATGTTTCCAATTCTTATCAGCAGCATCCTTCAAGTCCCATGATGTGGCAGAATTCACCATCATTTATCAATGGTCCTCATGCTCATCGCTTTCCACAAATGCCTGGCTTCCCTAGAACACCTCCTCATATGCTGAATGGGACATCACCTGTCCGCCACCATGTTGGATCAGCACCAGCAGTTAACCCTTCCCTTTGGGAAAGACATGCATTTTCAGGACAGTCTCCTGACACTTCTAGTCTTCACCTGGGATCTCCTAGCTTCGCCTGTTTTCCCAGTAGTCCCCAGTTGCATCCTATGGAAGTTCCGTCACGCAACATTTTTTCTCTTGTTGGTGGAAATTGCTCAGACATGAATACAAGTACCCGGCAACGCTCTTCGCAGGAGATCTGCCACATGTTTCCTGGGAGGAATTCAATGATGTCGATGCCTACCTCTTTTGGTTCACCAAATGAACGTGTCAGAAATCTATCTCACCGTAGAAGTGAAGCAAACTCTCATAATGCTGATAGGAAACAATATGAACTTGATATTGAGCGCATATTGCGTGGGGATGACAATCGAACCACACTGATGATAAAGAACATTCCCAACAAGTATGTATATGATCCCCTAACTGTTCTCAATTCTGGCATCTTTTCACTACACTCCATACCATTTGGCAGTTTAATTTTTTTAGATGAACTTTCCCATTTGTCGACAACCTTTAATGAAAAACATACTTTGCTTAAGTACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

769

Amino Acids

84.85

Weight (kDa)

6.31

Isoelectric Point (pI)

51.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	185 - 249	2.2e-11	RNA recognition motif
RRM_1	PF00076	272 - 335	1.8e-08	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07290 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960
fragaria_vesca	FvH4_5g09460
malus_domestica	MD06G1131000.v1.1 MD14G1147600.v1.1
prunus_persica	Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1
pyrus_communis	pycom06g12260 pycom14g12230
rosa_chinensis	RchiOBHm_Chr7g0188731
rosa_laevigata	RLG00000004666
rosa_multiflora	Rmu_sc0003854.1_g000006
rosa_roxburghii	Rroxscaffold_3G00266090
rosa_rugosa	Rorug06G0493200.1 Rorug06G0493300.1 Rorug06G0493400 Rorug06G0493400 Rorug06G0493500
rosa_samantha	Rh7AG098000 Rh7BG099400 Rh7CG101200 Rh7DG099800
rosa_wichuraiana	Rw7G008440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1494
AccB7I	CCANNNNNTGG	2 cut(s)	148, 1614
AccI	GTMKAC	2 cut(s)	816, 2267
AccII	CGCG	3 cut(s)	894, 1240, 1560
AciI	CCGC	7 cut(s)	465, 892, 1238, 1274, 1358, 1560, 1723
AclWI	GGATC	5 cut(s)	609, 883, 1744, 1828, 2171
AcoI	YGGCCR	1 cut(s)	131
AcsI	RAATTY	5 cut(s)	219, 929, 1073, 1621, 1981
AfaI	GTAC	3 cut(s)	1243, 1933, 2303
AfiI	CCNNNNNNNGG	5 cut(s)	148, 298, 1024, 1464, 1614
AflII	CTTAAG	1 cut(s)	2297
AflIII	ACRYGT	2 cut(s)	1965, 2026
AjnI	CCWGG	6 cut(s)	1021, 1135, 1158, 1672, 1815, 1972
AjuI	GAANNNNNNNTTGG	2 cut(s)	1311, 1343
AleI	CACNNNNGTG	1 cut(s)	1473
Alw21I	GWGCWC	3 cut(s)	181, 540, 715
Alw26I	GTCTC	3 cut(s)	79, 477, 1797
AlwI	GGATC	5 cut(s)	609, 883, 1744, 1828, 2171
AlwNI	CAGNNNCTG	1 cut(s)	956
AoxI	GGCC	3 cut(s)	75, 131, 1435
ApeKI	GCWGC	4 cut(s)	692, 947, 956, 1591
ApoI	RAATTY	5 cut(s)	219, 929, 1073, 1621, 1981
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
AseI	ATTAAT	2 cut(s)	171, 570
AspLEI	GCGC	3 cut(s)	30, 1219, 2109
AspS9I	GGNCC	3 cut(s)	395, 1435, 1643
AsuC2I	CCSGG	2 cut(s)	399, 1936
AsuHPI	GGTGA	8 cut(s)	263, 530, 1176, 1617, 1707, 1805, 2007, 2036
AsuII	TTCGAA	1 cut(s)	562
AvaII	GGWCC	2 cut(s)	395, 1643
BaeGI	GKGCMC	1 cut(s)	1497
BanI	GGYRCC	1 cut(s)	1494
BanII	GRGCYC	1 cut(s)	309
BauI	CACGAG	1 cut(s)	79
BbsI	GAAGAC	1 cut(s)	1802
Bbv12I	GWGCWC	3 cut(s)	181, 540, 715
BbvI	GCAGC	4 cut(s)	679, 934, 943, 1603
BccI	CCATC	6 cut(s)	386, 1026, 1102, 1362, 1495, 1636
BceAI	ACGGC	1 cut(s)	146
BciT130I	CCWGG	6 cut(s)	1023, 1137, 1160, 1674, 1817, 1974
BcnI	CCSGG	2 cut(s)	399, 1936
BcoDI	GTCTC	3 cut(s)	79, 477, 1797
BfaI	CTAG	6 cut(s)	228, 546, 1683, 1806, 1827, 2308
BfmI	CTRYAG	2 cut(s)	716, 948
BfrI	CTTAAG	1 cut(s)	2297
BglI	GCCNNNNNGGC	2 cut(s)	130, 733
BglII	AGATCT	1 cut(s)	1956
BisI	GCNGC	5 cut(s)	466, 693, 948, 957, 1592
BlpI	GCTNAGC	2 cut(s)	41, 180
BlsI	GCNGC	5 cut(s)	467, 694, 949, 958, 1593
BmcAI	AGTACT	1 cut(s)	2303
Bme1390I	CCNGG	8 cut(s)	399, 1023, 1137, 1160, 1674, 1817, 1936, 1974
Bme18I	GGWCC	2 cut(s)	395, 1643
BmgT120I	GGNCC	3 cut(s)	395, 1435, 1643
BmiI	GGNNCC	4 cut(s)	900, 1054, 1456, 1496
BmrFI	CCNGG	8 cut(s)	399, 1023, 1137, 1160, 1674, 1817, 1936, 1974
BmrI	ACTGGG	2 cut(s)	1839, 1849
BmsI	GCATC	8 cut(s)	661, 1106, 1228, 1538, 1603, 1870, 1986, 2211
BmuI	ACTGGG	2 cut(s)	1839, 1849
BpiI	GAAGAC	1 cut(s)	1802
BpmI	CTGGAG	1 cut(s)	1396
Bpu1102I	GCTNAGC	2 cut(s)	41, 180
Bpu14I	TTCGAA	1 cut(s)	562
BpuEI	CTTGAG	2 cut(s)	187, 830
BpuMI	CCSGG	2 cut(s)	399, 1936
BsaBI	GATNNNNATC	3 cut(s)	444, 1302, 2127
BsaI	GGTCTC	1 cut(s)	79
BsaJI	CCNNGG	7 cut(s)	72, 768, 799, 1022, 1159, 1816, 1973
Bsc4I	CCNNNNNNNGG	5 cut(s)	148, 298, 1024, 1464, 1614
Bse1I	ACTGG	4 cut(s)	1336, 1413, 1845, 1855
Bse3DI	GCAATG	2 cut(s)	583, 1435
Bse8I	GATNNNNATC	3 cut(s)	444, 1302, 2127
BseBI	CCWGG	6 cut(s)	1023, 1137, 1160, 1674, 1817, 1974
BseDI	CCNNGG	7 cut(s)	72, 768, 799, 1022, 1159, 1816, 1973
BseJI	GATNNNNATC	3 cut(s)	444, 1302, 2127
BseLI	CCNNNNNNNGG	5 cut(s)	148, 298, 1024, 1464, 1614
BseMI	GCAATG	2 cut(s)	583, 1435
BseMII	CTCAG	5 cut(s)	194, 722, 1214, 1362, 1929
BseNI	ACTGG	4 cut(s)	1336, 1413, 1845, 1855
BseRI	GAGGAG	4 cut(s)	69, 1530, 1533, 1683
BseSI	GKGCMC	1 cut(s)	1497
BseXI	GCAGC	4 cut(s)	679, 934, 943, 1603
BseYI	CCCAGC	3 cut(s)	20, 1013, 1550
Bsh1236I	CGCG	3 cut(s)	894, 1240, 1560
BshFI	GGCC	3 cut(s)	77, 133, 1437
BshNI	GGYRCC	1 cut(s)	1494
BsiHKAI	GWGCWC	3 cut(s)	181, 540, 715
BsiSI	CCGG	2 cut(s)	398, 1936
BslFI	GGGAC	3 cut(s)	1590, 1723, 1836
BslI	CCNNNNNNNGG	5 cut(s)	148, 298, 1024, 1464, 1614
BsmAI	GTCTC	3 cut(s)	79, 477, 1797
BsmBI	CGTCTC	1 cut(s)	477
BsmFI	GGGAC	3 cut(s)	1590, 1723, 1836
BsmI	GAATGC	2 cut(s)	1360, 1489
BsnI	GGCC	3 cut(s)	77, 133, 1437
Bso31I	GGTCTC	1 cut(s)	79
Bsp119I	TTCGAA	1 cut(s)	562
Bsp1286I	GDGCHC	5 cut(s)	181, 309, 540, 715, 1497
Bsp1720I	GCTNAGC	2 cut(s)	41, 180
BspACI	CCGC	7 cut(s)	465, 892, 1238, 1274, 1358, 1560, 1723
BspANI	GGCC	3 cut(s)	77, 133, 1437
BspCNI	CTCAG	5 cut(s)	193, 723, 1215, 1363, 1928
BspFNI	CGCG	3 cut(s)	894, 1240, 1560
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	4 cut(s)	900, 1054, 1456, 1496
BspMAI	CTGCAG	1 cut(s)	952
BspPI	GGATC	5 cut(s)	609, 883, 1744, 1828, 2171
BspQI	GCTCTTC	3 cut(s)	297, 966, 1951
BspT104I	TTCGAA	1 cut(s)	562
BspT107I	GGYRCC	1 cut(s)	1494
BspTI	CTTAAG	1 cut(s)	2297
BspTNI	GGTCTC	1 cut(s)	79
BsrDI	GCAATG	2 cut(s)	583, 1435
BsrI	ACTGG	4 cut(s)	1336, 1413, 1845, 1855
BssECI	CCNNGG	7 cut(s)	72, 768, 799, 1022, 1159, 1816, 1973
BssNAI	GTATAC	1 cut(s)	817
BssSI	CACGAG	1 cut(s)	79
BssT1I	CCWWGG	3 cut(s)	72, 768, 799
Bst1107I	GTATAC	1 cut(s)	817
Bst2BI	CACGAG	1 cut(s)	79
Bst2UI	CCWGG	6 cut(s)	1023, 1137, 1160, 1674, 1817, 1974
Bst4CI	ACNGT	5 cut(s)	283, 1385, 1791, 2048, 2188
Bst6I	CTCTTC	4 cut(s)	297, 966, 1134, 1951
BstAFI	CTTAAG	1 cut(s)	2297
BstAPI	GCANNNNNTGC	1 cut(s)	956
BstBI	TTCGAA	1 cut(s)	562
BstC8I	GCNNGC	4 cut(s)	536, 646, 650, 1426
BstDEI	CTNAG	7 cut(s)	41, 180, 731, 1223, 1371, 1439, 1915
BstEII	GGTNACC	1 cut(s)	1331
BstFNI	CGCG	3 cut(s)	894, 1240, 1560
BstHHI	GCGC	3 cut(s)	30, 1219, 2109
BstMAI	GTCTC	3 cut(s)	79, 477, 1797
BstNI	CCWGG	6 cut(s)	1023, 1137, 1160, 1674, 1817, 1974
BstNSI	RCATGY	2 cut(s)	1778, 1969
BstPI	GGTNACC	1 cut(s)	1331
BstSCI	CCNGG	8 cut(s)	397, 1021, 1135, 1158, 1672, 1815, 1934, 1972
BstSFI	CTRYAG	2 cut(s)	716, 948
BstSLI	GKGCMC	1 cut(s)	1497
BstUI	CGCG	3 cut(s)	894, 1240, 1560
BstV1I	GCAGC	4 cut(s)	679, 934, 943, 1603
BstV2I	GAAGAC	1 cut(s)	1802
BstX2I	RGATCY	4 cut(s)	601, 888, 1820, 1956
BstXI	CCANNNNNNTGG	3 cut(s)	111, 1420, 1733
BstYI	RGATCY	4 cut(s)	601, 888, 1820, 1956
BstZ17I	GTATAC	1 cut(s)	817
BsuRI	GGCC	3 cut(s)	77, 133, 1437
BtgZI	GCGATG	1 cut(s)	1640
BtsI	GCAGTG	1 cut(s)	463
BtsIMutI	CAGTG	5 cut(s)	463, 728, 1343, 1420, 2138
Cac8I	GCNNGC	4 cut(s)	536, 646, 650, 1426
CaiI	CAGNNNCTG	1 cut(s)	956
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	3 cut(s)	30, 1219, 2109
Cfr13I	GGNCC	3 cut(s)	395, 1435, 1643
Csp6I	GTAC	3 cut(s)	1242, 1932, 2302
CspCI	CAANNNNNGTGG	4 cut(s)	637, 672, 1396, 1431
CviQI	GTAC	3 cut(s)	1242, 1932, 2302
DdeI	CTNAG	7 cut(s)	41, 180, 731, 1223, 1371, 1439, 1915
EaeI	YGGCCR	1 cut(s)	131
Eam1104I	CTCTTC	4 cut(s)	297, 966, 1134, 1951
EarI	CTCTTC	4 cut(s)	297, 966, 1134, 1951
EciI	GGCGGA	1 cut(s)	1712
Eco130I	CCWWGG	3 cut(s)	72, 768, 799
Eco147I	AGGCCT	1 cut(s)	77
Eco24I	GRGCYC	1 cut(s)	309
Eco31I	GGTCTC	1 cut(s)	79
Eco32I	GATATC	1 cut(s)	625
Eco47I	GGWCC	2 cut(s)	395, 1643
Eco91I	GGTNACC	1 cut(s)	1331
EcoO65I	GGTNACC	1 cut(s)	1331
EcoRI	GAATTC	2 cut(s)	1621, 1981
EcoRII	CCWGG	6 cut(s)	1021, 1135, 1158, 1672, 1815, 1972
EcoRV	GATATC	1 cut(s)	625
EcoT14I	CCWWGG	3 cut(s)	72, 768, 799
EcoT22I	ATGCAT	3 cut(s)	970, 1198, 1780
EcoT38I	GRGCYC	1 cut(s)	309
ErhI	CCWWGG	3 cut(s)	72, 768, 799
Esp3I	CGTCTC	1 cut(s)	477
FalI	AAGNNNNNCTT	4 cut(s)	792, 824, 945, 977
FaqI	GGGAC	3 cut(s)	1590, 1723, 1836
FauNDI	CATATG	1 cut(s)	1698
FblI	GTMKAC	2 cut(s)	816, 2267
Fnu4HI	GCNGC	5 cut(s)	466, 693, 948, 957, 1592
FriOI	GRGCYC	1 cut(s)	309
Fsp4HI	GCNGC	5 cut(s)	466, 693, 948, 957, 1592
FspBI	CTAG	6 cut(s)	228, 546, 1683, 1806, 1827, 2308
GlaI	GCGC	3 cut(s)	29, 1218, 2108
GluI	GCNGC	5 cut(s)	466, 693, 948, 957, 1592
GsaI	CCCAGC	3 cut(s)	24, 1017, 1554
GsuI	CTGGAG	1 cut(s)	1396
HaeIII	GGCC	3 cut(s)	77, 133, 1437
HapII	CCGG	2 cut(s)	398, 1936
HhaI	GCGC	3 cut(s)	30, 1219, 2109
Hin6I	GCGC	3 cut(s)	28, 1217, 2107
HinP1I	GCGC	3 cut(s)	28, 1217, 2107
HincII	GTYRAC	3 cut(s)	796, 1753, 2268
HindII	GTYRAC	3 cut(s)	796, 1753, 2268
HindIII	AAGCTT	2 cut(s)	743, 1004
HinfI	GANTC	7 cut(s)	94, 314, 827, 866, 910, 1151, 1298
HpaI	GTTAAC	2 cut(s)	796, 1753
HpaII	CCGG	2 cut(s)	398, 1936
HphI	GGTGA	8 cut(s)	263, 530, 1176, 1617, 1707, 1805, 2007, 2036
Hpy166II	GTNNAC	6 cut(s)	521, 796, 817, 1753, 2015, 2268
Hpy188III	TCNNGA	8 cut(s)	359, 546, 1295, 1379, 1475, 1536, 1785, 1796
Hpy8I	GTNNAC	6 cut(s)	521, 796, 817, 1753, 2015, 2268
HpyCH4III	ACNGT	5 cut(s)	283, 1385, 1791, 2048, 2188
HpyCH4IV	ACGT	1 cut(s)	2026
HpyF3I	CTNAG	7 cut(s)	41, 180, 731, 1223, 1371, 1439, 1915
HpySE526I	ACGT	1 cut(s)	2026
HspAI	GCGC	3 cut(s)	28, 1217, 2107
KspAI	GTTAAC	2 cut(s)	796, 1753
LguI	GCTCTTC	3 cut(s)	297, 966, 1951
LmnI	GCTCC	4 cut(s)	25, 904, 1063, 1520
Lsp1109I	GCAGC	4 cut(s)	679, 934, 943, 1603
LweI	GCATC	8 cut(s)	661, 1106, 1228, 1538, 1603, 1870, 1986, 2211
MaeI	CTAG	6 cut(s)	228, 546, 1683, 1806, 1827, 2308
MaeII	ACGT	1 cut(s)	2026
MaeIII	GTNAC	2 cut(s)	1331, 1878
MflI	RGATCY	4 cut(s)	601, 888, 1820, 1956
MhlI	GDGCHC	5 cut(s)	181, 309, 540, 715, 1497
MlyI	GAGTC	1 cut(s)	919
MmeI	TCCRAC	4 cut(s)	133, 1122, 1431, 1714
Mph1103I	ATGCAT	3 cut(s)	970, 1198, 1780
MseI	TTAA	9 cut(s)	171, 570, 795, 1077, 1323, 1752, 2237, 2277, 2298
MslI	CAYNNNNRTG	4 cut(s)	528, 1473, 1569, 2141
MspCI	CTTAAG	1 cut(s)	2297
MspI	CCGG	2 cut(s)	398, 1936
MspR9I	CCNGG	8 cut(s)	399, 1023, 1137, 1160, 1674, 1817, 1936, 1974
Mva1269I	GAATGC	2 cut(s)	1360, 1489
MvaI	CCWGG	6 cut(s)	1023, 1137, 1160, 1674, 1817, 1974
MvnI	CGCG	3 cut(s)	894, 1240, 1560
NciI	CCSGG	2 cut(s)	399, 1936
NdeI	CATATG	1 cut(s)	1698
NlaIV	GGNNCC	4 cut(s)	900, 1054, 1456, 1496
NmuCI	GTSAC	1 cut(s)	1878
NsiI	ATGCAT	3 cut(s)	970, 1198, 1780
NspI	RCATGY	2 cut(s)	1778, 1969
NspV	TTCGAA	1 cut(s)	562
OliI	CACNNNNGTG	1 cut(s)	1473
PagI	TCATGA	1 cut(s)	1378
PceI	AGGCCT	1 cut(s)	77
PciI	ACATGT	1 cut(s)	1965
PciSI	GCTCTTC	3 cut(s)	297, 966, 1951
PctI	GAATGC	2 cut(s)	1360, 1489
PfeI	GAWTC	6 cut(s)	94, 314, 827, 866, 1151, 1298
PflMI	CCANNNNNTGG	2 cut(s)	148, 1614
PfoI	TCCNGGA	1 cut(s)	1135
PkrI	GCNGC	5 cut(s)	467, 694, 949, 958, 1593
PleI	GAGTC	1 cut(s)	918
PpsI	GAGTC	1 cut(s)	918
PscI	ACATGT	1 cut(s)	1965
PshBI	ATTAAT	2 cut(s)	171, 570
Psp6I	CCWGG	6 cut(s)	1021, 1135, 1158, 1672, 1815, 1972
PspEI	GGTNACC	1 cut(s)	1331
PspFI	CCCAGC	3 cut(s)	20, 1013, 1550
PspGI	CCWGG	6 cut(s)	1021, 1135, 1158, 1672, 1815, 1972
PspN4I	GGNNCC	4 cut(s)	900, 1054, 1456, 1496
PspPI	GGNCC	3 cut(s)	395, 1435, 1643
PstI	CTGCAG	1 cut(s)	952
PstNI	CAGNNNCTG	1 cut(s)	956
PsuI	RGATCY	4 cut(s)	601, 888, 1820, 1956
RsaI	GTAC	3 cut(s)	1243, 1933, 2303
RsaNI	GTAC	3 cut(s)	1242, 1932, 2302
RseI	CAYNNNNRTG	4 cut(s)	528, 1473, 1569, 2141
SalI	GTCGAC	1 cut(s)	2266
SapI	GCTCTTC	3 cut(s)	297, 966, 1951
SaqAI	TTAA	9 cut(s)	171, 570, 795, 1077, 1323, 1752, 2237, 2277, 2298
SatI	GCNGC	5 cut(s)	466, 693, 948, 957, 1592
Sau96I	GGNCC	3 cut(s)	395, 1435, 1643
ScaI	AGTACT	1 cut(s)	2303
SchI	GAGTC	1 cut(s)	919
ScrFI	CCNGG	8 cut(s)	399, 1023, 1137, 1160, 1674, 1817, 1936, 1974
SduI	GDGCHC	5 cut(s)	181, 309, 540, 715, 1497
SfaNI	GCATC	8 cut(s)	661, 1106, 1228, 1538, 1603, 1870, 1986, 2211
SfcI	CTRYAG	2 cut(s)	716, 948
SfuI	TTCGAA	1 cut(s)	562
SinI	GGWCC	2 cut(s)	395, 1643
SmiMI	CAYNNNNRTG	4 cut(s)	528, 1473, 1569, 2141
SmlI	CTYRAG	3 cut(s)	202, 809, 2297
SmoI	CTYRAG	3 cut(s)	202, 809, 2297
SseBI	AGGCCT	1 cut(s)	77
SsiI	CCGC	7 cut(s)	465, 892, 1238, 1274, 1358, 1560, 1723
SspI	AATATT	2 cut(s)	568, 1081
SspMI	CTAG	6 cut(s)	228, 546, 1683, 1806, 1827, 2308
StuI	AGGCCT	1 cut(s)	77
StyD4I	CCNGG	8 cut(s)	397, 1021, 1135, 1158, 1672, 1815, 1934, 1972
StyI	CCWWGG	3 cut(s)	72, 768, 799
TaaI	ACNGT	5 cut(s)	283, 1385, 1791, 2048, 2188
TaiI	ACGT	1 cut(s)	2029
TaqI	TCGA	6 cut(s)	562, 761, 1180, 1994, 2131, 2267
TaqII	GACCGA	1 cut(s)	1034
TatI	WGTACW	1 cut(s)	2301
TauI	GCSGC	1 cut(s)	468
TfiI	GAWTC	6 cut(s)	94, 314, 827, 866, 1151, 1298
Tru1I	TTAA	9 cut(s)	171, 570, 795, 1077, 1323, 1752, 2237, 2277, 2298
Tru9I	TTAA	9 cut(s)	171, 570, 795, 1077, 1323, 1752, 2237, 2277, 2298
TscAI	CASTG	5 cut(s)	463, 735, 1343, 1420, 2145
TseFI	GTSAC	1 cut(s)	1878
TseI	GCWGC	4 cut(s)	692, 947, 956, 1591
Tsp45I	GTSAC	1 cut(s)	1878
TspGWI	ACGGA	2 cut(s)	1527, 1866
TspRI	CASTG	5 cut(s)	463, 735, 1343, 1420, 2145
Van91I	CCANNNNNTGG	2 cut(s)	148, 1614
Vha464I	CTTAAG	1 cut(s)	2297
VpaK11BI	GGWCC	2 cut(s)	395, 1643
VspI	ATTAAT	2 cut(s)	171, 570
XapI	RAATTY	5 cut(s)	219, 929, 1073, 1621, 1981
XbaI	TCTAGA	1 cut(s)	545
XceI	RCATGY	2 cut(s)	1778, 1969
XcmI	CCANNNNNNNNNTGG	3 cut(s)	149, 1198, 1970
XmiI	GTMKAC	2 cut(s)	816, 2267
XspI	CTAG	6 cut(s)	228, 546, 1683, 1806, 1827, 2308
ZrmI	AGTACT	1 cut(s)	2303
Zsp2I	ATGCAT	3 cut(s)	970, 1198, 1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.