Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003328

Physical Location & Seq

Genomic Coordinates Forward (+)

59462443 .. 59470837

Gene Structure 8395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00266090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGATTTCTTATTATGATATAAGGGCTGCCCAAAAAGCGATAAGAGCACTACAGAGTAAGCCACTGAGGCGTCGGAAACTTGACATACACTATTCAATACCCAAGGACAACCCTTCTGATAAAGATGTTAACCAAGGAACACTTGAGGTATACAATGTTGATTCTTCTGTTTCTGATGATGAGCTTACTAAACTTTTCGAATCTTATGGGGAAATCAAAGAGATCCGCGAGGCTCCAAACAAGAGTCATAACAAGTTGATAGAATTTTATGATGTTAGAGCTGCAGAAGCTGCTCTTCATGCATTGAATACGAGTGAGATTGGTGGGAAGCAGATCAAGCTTGAACCCAGCCATCCAGGGGGTGCCAGAATGGGTTTCGGTCAAGGTTCCAAGCAGGAGCAAGATGAATTTAATATTTGTCATAGTCCATCCGACAACTTATCAGCAGGATGCAAGGCAACCCTTCATCCTGGAATGGCTAATGAATCTAACCTGGGATTACATTCTTCAATTCGATCACCTTCCAATGCATTTATGGGAAATGCTTTGGCGCATCTGAGTTCAAGTGTTCCGCGTACCTTGCCCTCTCCGATGAGAGTGGTGTCTGCGGACAAAAACTTTTGCCTTCCTGATTCCAATCACTCTCTGAATGAAATTAAGTTTGGTAACCAGTGCATTCCCAATTTCCATCCGCATTCCCTCCCTGAGTATCATGACAGTTTAGCACATGGTATCACATCCAACCCCAGTGGAGTGACTGGCAATGTGGGCCTTAGAATGACAGAAGGAACAGACAGGAGGCACATTCGTGAAATGAATGCAAATGGGCACCTGATGGAACTGAACGGAGGAGGAGCTTTTGCATCTTCTGGAAATGGGAGTACTGGGGTTCGCGGACATCATTATGTTTCCAATTCTTATCAGCAGCATCCTTCAAGTCCCATGATGTGGCAGAATTCACCATCATTTATCAATGGTCCTCATGCTCATCGCTTTCCACAAATGCCTGGCTTCCCTAGAACACCTCCTCACATGCTGAATGGGACATCACCTGTCCGCCACCATGTTGGATCAGCACCAGCAGTTAACCCTTCCCTTTGGGAAAGACATGCATTTTCAGGACAGTCTCCTGACACTTCTAATCTTCACCTGGGATCTCCTAGCTTCGCCTGTTTTCCCAGTAGTCCGCAGTTGCATCCTATGGATGTTCCGTCACGCAACATCTTTTCTCTTGTTGGTGGAAATTGCTCAGACATGAATACAAGTACCCGGCAACGCTCTTCGCAGGAGATCTGCCACATGTTTCCTGGGAGGAATTCAATGATGTCGATGCCTACCTCTTTTGGTTCACCAAATGAACGTGTCAGAAATCTATCTCACCGTAGAAGTGAAGCAAACTCTCATAATGCTGATAGGAAACAATATGAACTTGATATTGAGCGCATATTGCGTGGGGATGACAACCGAACCACACTGATGATAAAGAACATTCCCAACAAGTATACTTCAAAGATGCTGCTTGCAGTAATTGATGAGAACTGTCGAGGAATATATGACTTCATTTATTTGCCAATTGACTTCAAGAACAAATGCAATGTGGGATATGCATTCATCAACATGATTGATCCTCAACAGATTGTTCCATTCTATAAGGCATTCAATGGCAAAAAATGGGAGAAGTTCAACAGTGAAAAGGTTGCAACACTTGCATATGCTCGTATTCAGGGAAAAGCTGCTCTTATTGCCCATTTCCAGAATTCAAGCTTAATGAATGAGGACAAACGGTGTCGCCCTATACTCTTCCACACAGATGGACCAAATGCTGGGGACCCCGAACCCTTTCCAATGGGCACCCACATCCGATCAAGACCAGGAAGATCTCGAACCAGTGGCTATGAGGAAAGCCATAACCAATGGAGCCCTTCTTCATCTGCAAATGGAGAGGAAAGTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

651

Amino Acids

72.2

Weight (kDa)

8.66

Isoelectric Point (pI)

60.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	50 - 113	1.4e-08	RNA recognition motif
RRM_2	PF04059	489 - 585	4.1e-54	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07290 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960
fragaria_vesca	FvH4_5g09460
malus_domestica	MD06G1131000.v1.1 MD14G1147600.v1.1
prunus_persica	Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1
pyrus_communis	pycom06g12260 pycom14g12230
rosa_chinensis	RchiOBHm_Chr7g0188731
rosa_laevigata	RLG00000004666
rosa_multiflora	Rmu_sc0003854.1_g000006
rosa_roxburghii	Rroxscaffold_3G00266090
rosa_rugosa	Rorug06G0493200.1 Rorug06G0493300.1 Rorug06G0493400 Rorug06G0493400 Rorug06G0493500
rosa_samantha	Rh7AG098000 Rh7BG099400 Rh7CG101200 Rh7DG099800
rosa_wichuraiana	Rw7G008440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	362, 828, 1850
AccB7I	CCANNNNNTGG	2 cut(s)	948, 1823
AccI	GTMKAC	2 cut(s)	150, 1502
AccII	CGCG	3 cut(s)	228, 574, 894
AciI	CCGC	7 cut(s)	226, 572, 608, 692, 894, 1057, 1187
AclWI	GGATC	4 cut(s)	217, 1078, 1162, 1619
AcsI	RAATTY	5 cut(s)	263, 407, 955, 1315, 1756
AcyI	GRCGYC	1 cut(s)	70
AfaI	GTAC	3 cut(s)	577, 883, 1267
AfiI	CCNNNNNNNGG	3 cut(s)	358, 948, 1823
AflIII	ACRYGT	2 cut(s)	1299, 1360
AjnI	CCWGG	7 cut(s)	355, 469, 492, 1006, 1149, 1306, 1870
AjuI	GAANNNNNNNTTGG	2 cut(s)	645, 677
AleI	CACNNNNGTG	1 cut(s)	807
AluBI	AGCT	8 cut(s)	184, 281, 290, 340, 857, 1164, 1733, 1764
AluI	AGCT	8 cut(s)	184, 281, 290, 340, 857, 1164, 1733, 1764
Alw21I	GWGCWC	1 cut(s)	49
Alw26I	GTCTC	1 cut(s)	1131
AlwI	GGATC	4 cut(s)	217, 1078, 1162, 1619
AlwNI	CAGNNNCTG	1 cut(s)	290
AoxI	GGCC	1 cut(s)	769
ApeKI	GCWGC	6 cut(s)	26, 281, 290, 925, 1516, 1733
ApoI	RAATTY	5 cut(s)	263, 407, 955, 1315, 1756
Asp700I	GAANNNNTTC	1 cut(s)	1839
AspLEI	GCGC	2 cut(s)	553, 1443
AspS9I	GGNCC	4 cut(s)	769, 977, 1814, 1828
AsuC2I	CCSGG	1 cut(s)	1270
AsuHPI	GGTGA	6 cut(s)	510, 951, 1041, 1139, 1341, 1370
AsuII	TTCGAA	1 cut(s)	198
AvaII	GGWCC	3 cut(s)	977, 1814, 1828
BaeGI	GKGCMC	2 cut(s)	831, 1853
BanI	GGYRCC	3 cut(s)	362, 828, 1850
BanII	GRGCYC	1 cut(s)	1922
Bbv12I	GWGCWC	1 cut(s)	49
BbvI	GCAGC	6 cut(s)	13, 268, 277, 937, 1503, 1720
BccI	CCATC	6 cut(s)	360, 436, 696, 829, 970, 1805
BciT130I	CCWGG	7 cut(s)	357, 471, 494, 1008, 1151, 1308, 1872
BcnI	CCSGG	1 cut(s)	1270
BcoDI	GTCTC	1 cut(s)	1131
BfaI	CTAG	3 cut(s)	1017, 1161, 1954
BfmI	CTRYAG	2 cut(s)	50, 282
BglI	GCCNNNNNGGC	1 cut(s)	67
BglII	AGATCT	2 cut(s)	1290, 1877
BisI	GCNGC	6 cut(s)	27, 282, 291, 926, 1517, 1734
BlsI	GCNGC	6 cut(s)	28, 283, 292, 927, 1518, 1735
BmcAI	AGTACT	1 cut(s)	883
Bme1390I	CCNGG	8 cut(s)	357, 471, 494, 1008, 1151, 1270, 1308, 1872
Bme18I	GGWCC	3 cut(s)	977, 1814, 1828
BmgT120I	GGNCC	4 cut(s)	769, 977, 1814, 1828
BmiI	GGNNCC	8 cut(s)	234, 364, 388, 830, 1829, 1830, 1852, 1919
BmrFI	CCNGG	8 cut(s)	357, 471, 494, 1008, 1151, 1270, 1308, 1872
BmrI	ACTGGG	3 cut(s)	741, 894, 1173
BmsI	GCATC	7 cut(s)	440, 562, 872, 937, 1204, 1320, 1503
BmuI	ACTGGG	3 cut(s)	741, 894, 1173
Bpu14I	TTCGAA	1 cut(s)	198
BpuEI	CTTGAG	1 cut(s)	164
BpuMI	CCSGG	1 cut(s)	1270
BsaBI	GATNNNNATC	1 cut(s)	636
BsaHI	GRCGYC	1 cut(s)	70
BsaJI	CCNNGG	6 cut(s)	102, 133, 356, 493, 1150, 1307
Bsc4I	CCNNNNNNNGG	3 cut(s)	358, 948, 1823
Bse1I	ACTGG	6 cut(s)	670, 747, 763, 889, 1179, 1887
Bse3DI	GCAATG	2 cut(s)	769, 1600
Bse8I	GATNNNNATC	1 cut(s)	636
BseBI	CCWGG	7 cut(s)	357, 471, 494, 1008, 1151, 1308, 1872
BseDI	CCNNGG	6 cut(s)	102, 133, 356, 493, 1150, 1307
BseJI	GATNNNNATC	1 cut(s)	636
BseLI	CCNNNNNNNGG	3 cut(s)	358, 948, 1823
BseMI	GCAATG	2 cut(s)	769, 1600
BseMII	CTCAG	4 cut(s)	56, 548, 696, 1263
BseNI	ACTGG	6 cut(s)	670, 747, 763, 889, 1179, 1887
BseRI	GAGGAG	3 cut(s)	864, 867, 1017
BseSI	GKGCMC	2 cut(s)	831, 1853
BseXI	GCAGC	6 cut(s)	13, 268, 277, 937, 1503, 1720
BseYI	CCCAGC	2 cut(s)	347, 1823
Bsh1236I	CGCG	3 cut(s)	228, 574, 894
BshFI	GGCC	1 cut(s)	771
BshNI	GGYRCC	3 cut(s)	362, 828, 1850
BsiHKAI	GWGCWC	1 cut(s)	49
BsiSI	CCGG	1 cut(s)	1270
BslFI	GGGAC	3 cut(s)	924, 1057, 1841
BslI	CCNNNNNNNGG	3 cut(s)	358, 948, 1823
BsmAI	GTCTC	1 cut(s)	1131
BsmFI	GGGAC	3 cut(s)	924, 1057, 1841
BsmI	GAATGC	5 cut(s)	675, 694, 823, 1607, 1655
BsnI	GGCC	1 cut(s)	771
Bsp119I	TTCGAA	1 cut(s)	198
Bsp1286I	GDGCHC	4 cut(s)	49, 831, 1853, 1922
Bsp143I	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
BspACI	CCGC	7 cut(s)	226, 572, 608, 692, 894, 1057, 1187
BspANI	GGCC	1 cut(s)	771
BspCNI	CTCAG	4 cut(s)	57, 549, 697, 1262
BspFNI	CGCG	3 cut(s)	228, 574, 894
BspHI	TCATGA	1 cut(s)	712
BspLI	GGNNCC	8 cut(s)	234, 364, 388, 830, 1829, 1830, 1852, 1919
BspMAI	CTGCAG	1 cut(s)	286
BspPI	GGATC	4 cut(s)	217, 1078, 1162, 1619
BspQI	GCTCTTC	2 cut(s)	300, 1285
BspT104I	TTCGAA	1 cut(s)	198
BspT107I	GGYRCC	3 cut(s)	362, 828, 1850
BsrDI	GCAATG	2 cut(s)	769, 1600
BsrI	ACTGG	6 cut(s)	670, 747, 763, 889, 1179, 1887
BssECI	CCNNGG	6 cut(s)	102, 133, 356, 493, 1150, 1307
BssMI	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
BssNAI	GTATAC	2 cut(s)	151, 1503
BssNI	GRCGYC	1 cut(s)	70
BssT1I	CCWWGG	2 cut(s)	102, 133
Bst1107I	GTATAC	2 cut(s)	151, 1503
Bst2UI	CCWGG	7 cut(s)	357, 471, 494, 1008, 1151, 1308, 1872
Bst4CI	ACNGT	6 cut(s)	719, 1125, 1382, 1541, 1688, 1785
Bst6I	CTCTTC	3 cut(s)	300, 1285, 1805
BstACI	GRCGYC	1 cut(s)	70
BstAPI	GCANNNNNTGC	2 cut(s)	290, 1706
BstBI	TTCGAA	1 cut(s)	198
BstC8I	GCNNGC	1 cut(s)	1521
BstDEI	CTNAG	5 cut(s)	65, 557, 705, 773, 1249
BstEII	GGTNACC	1 cut(s)	665
BstFNI	CGCG	3 cut(s)	228, 574, 894
BstHHI	GCGC	2 cut(s)	553, 1443
BstKTI	GATC	9 cut(s)	225, 336, 518, 1073, 1157, 1293, 1627, 1865, 1880
BstMAI	GTCTC	1 cut(s)	1131
BstMBI	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
BstNI	CCWGG	7 cut(s)	357, 471, 494, 1008, 1151, 1308, 1872
BstNSI	RCATGY	3 cut(s)	1036, 1112, 1303
BstPI	GGTNACC	1 cut(s)	665
BstSCI	CCNGG	8 cut(s)	355, 469, 492, 1006, 1149, 1268, 1306, 1870
BstSFI	CTRYAG	2 cut(s)	50, 282
BstSLI	GKGCMC	2 cut(s)	831, 1853
BstUI	CGCG	3 cut(s)	228, 574, 894
BstV1I	GCAGC	6 cut(s)	13, 268, 277, 937, 1503, 1720
BstX2I	RGATCY	4 cut(s)	222, 1154, 1290, 1877
BstXI	CCANNNNNNTGG	2 cut(s)	1067, 1811
BstYI	RGATCY	4 cut(s)	222, 1154, 1290, 1877
BstZ17I	GTATAC	2 cut(s)	151, 1503
BsuRI	GGCC	1 cut(s)	771
BtgZI	GCGATG	1 cut(s)	974
BtsIMutI	CAGTG	6 cut(s)	62, 677, 754, 1472, 1693, 1894
Cac8I	GCNNGC	1 cut(s)	1521
CaiI	CAGNNNCTG	1 cut(s)	290
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	2 cut(s)	553, 1443
Cfr13I	GGNCC	4 cut(s)	769, 977, 1814, 1828
CseI	GACGC	1 cut(s)	59
Csp6I	GTAC	3 cut(s)	576, 882, 1266
CspCI	CAANNNNNGTGG	2 cut(s)	730, 765
CviQI	GTAC	3 cut(s)	576, 882, 1266
DdeI	CTNAG	5 cut(s)	65, 557, 705, 773, 1249
DpnI	GATC	9 cut(s)	224, 335, 517, 1072, 1156, 1292, 1626, 1864, 1879
DpnII	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
Eam1104I	CTCTTC	3 cut(s)	300, 1285, 1805
EarI	CTCTTC	3 cut(s)	300, 1285, 1805
EciI	GGCGGA	1 cut(s)	1046
Eco130I	CCWWGG	2 cut(s)	102, 133
Eco24I	GRGCYC	1 cut(s)	1922
Eco47I	GGWCC	3 cut(s)	977, 1814, 1828
Eco91I	GGTNACC	1 cut(s)	665
EcoO109I	RGGNCCY	1 cut(s)	1828
EcoO65I	GGTNACC	1 cut(s)	665
EcoRI	GAATTC	3 cut(s)	955, 1315, 1756
EcoRII	CCWGG	7 cut(s)	355, 469, 492, 1006, 1149, 1306, 1870
EcoT14I	CCWWGG	2 cut(s)	102, 133
EcoT22I	ATGCAT	4 cut(s)	304, 532, 1114, 1609
EcoT38I	GRGCYC	1 cut(s)	1922
ErhI	CCWWGG	2 cut(s)	102, 133
FalI	AAGNNNNNCTT	6 cut(s)	126, 158, 279, 311, 1722, 1754
FaqI	GGGAC	3 cut(s)	924, 1057, 1841
FauNDI	CATATG	1 cut(s)	1711
FblI	GTMKAC	2 cut(s)	150, 1502
Fnu4HI	GCNGC	6 cut(s)	27, 282, 291, 926, 1517, 1734
FriOI	GRGCYC	1 cut(s)	1922
Fsp4HI	GCNGC	6 cut(s)	27, 282, 291, 926, 1517, 1734
FspBI	CTAG	3 cut(s)	1017, 1161, 1954
GlaI	GCGC	2 cut(s)	552, 1442
GluI	GCNGC	6 cut(s)	27, 282, 291, 926, 1517, 1734
GsaI	CCCAGC	2 cut(s)	351, 1827
HaeIII	GGCC	1 cut(s)	771
HapII	CCGG	1 cut(s)	1270
HgaI	GACGC	1 cut(s)	59
HhaI	GCGC	2 cut(s)	553, 1443
Hin1I	GRCGYC	1 cut(s)	70
Hin6I	GCGC	2 cut(s)	551, 1441
HinP1I	GCGC	2 cut(s)	551, 1441
HincII	GTYRAC	2 cut(s)	130, 1087
HindII	GTYRAC	2 cut(s)	130, 1087
HindIII	AAGCTT	2 cut(s)	338, 1762
HinfI	GANTC	5 cut(s)	161, 200, 244, 485, 632
HpaI	GTTAAC	2 cut(s)	130, 1087
HpaII	CCGG	1 cut(s)	1270
HphI	GGTGA	6 cut(s)	510, 951, 1041, 1139, 1341, 1370
Hpy166II	GTNNAC	5 cut(s)	130, 151, 1087, 1349, 1503
Hpy8I	GTNNAC	5 cut(s)	130, 151, 1087, 1349, 1503
Hpy99I	CGWCG	1 cut(s)	75
HpyAV	CCTTC	8 cut(s)	123, 473, 531, 635, 779, 942, 1101, 1932
HpyCH4III	ACNGT	6 cut(s)	719, 1125, 1382, 1541, 1688, 1785
HpyCH4IV	ACGT	1 cut(s)	1360
HpyF3I	CTNAG	5 cut(s)	65, 557, 705, 773, 1249
HpySE526I	ACGT	1 cut(s)	1360
Hsp92I	GRCGYC	1 cut(s)	70
HspAI	GCGC	2 cut(s)	551, 1441
KflI	GGGWCCC	1 cut(s)	1828
KspAI	GTTAAC	2 cut(s)	130, 1087
Kzo9I	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
LguI	GCTCTTC	2 cut(s)	300, 1285
LmnI	GCTCC	4 cut(s)	238, 397, 854, 1917
Lsp1109I	GCAGC	6 cut(s)	13, 268, 277, 937, 1503, 1720
LweI	GCATC	7 cut(s)	440, 562, 872, 937, 1204, 1320, 1503
MaeI	CTAG	3 cut(s)	1017, 1161, 1954
MaeII	ACGT	1 cut(s)	1360
MaeIII	GTNAC	3 cut(s)	665, 754, 1212
MalI	GATC	9 cut(s)	224, 335, 517, 1072, 1156, 1292, 1626, 1864, 1879
MboI	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
MboII	GAAGA	9 cut(s)	156, 287, 498, 858, 1136, 1272, 1792, 1887, 1917
MfeI	CAATTG	1 cut(s)	1572
MflI	RGATCY	4 cut(s)	222, 1154, 1290, 1877
MhlI	GDGCHC	4 cut(s)	49, 831, 1853, 1922
MlyI	GAGTC	1 cut(s)	253
MmeI	TCCRAC	4 cut(s)	53, 456, 765, 1048
Mph1103I	ATGCAT	4 cut(s)	304, 532, 1114, 1609
MroXI	GAANNNNTTC	1 cut(s)	1839
MseI	TTAA	5 cut(s)	129, 411, 657, 1086, 1766
MslI	CAYNNNNRTG	5 cut(s)	807, 903, 1475, 1616, 1809
MspI	CCGG	1 cut(s)	1270
MspR9I	CCNGG	8 cut(s)	357, 471, 494, 1008, 1151, 1270, 1308, 1872
MunI	CAATTG	1 cut(s)	1572
Mva1269I	GAATGC	5 cut(s)	675, 694, 823, 1607, 1655
MvaI	CCWGG	7 cut(s)	357, 471, 494, 1008, 1151, 1308, 1872
MvnI	CGCG	3 cut(s)	228, 574, 894
NciI	CCSGG	1 cut(s)	1270
NdeI	CATATG	1 cut(s)	1711
NdeII	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
NlaIV	GGNNCC	8 cut(s)	234, 364, 388, 830, 1829, 1830, 1852, 1919
NmuCI	GTSAC	2 cut(s)	754, 1212
NsiI	ATGCAT	4 cut(s)	304, 532, 1114, 1609
NspI	RCATGY	3 cut(s)	1036, 1112, 1303
NspV	TTCGAA	1 cut(s)	198
OliI	CACNNNNGTG	1 cut(s)	807
PagI	TCATGA	1 cut(s)	712
PciI	ACATGT	1 cut(s)	1299
PciSI	GCTCTTC	2 cut(s)	300, 1285
PctI	GAATGC	5 cut(s)	675, 694, 823, 1607, 1655
PdmI	GAANNNNTTC	1 cut(s)	1839
PfeI	GAWTC	4 cut(s)	161, 200, 485, 632
PflMI	CCANNNNNTGG	2 cut(s)	948, 1823
PfoI	TCCNGGA	1 cut(s)	469
PkrI	GCNGC	6 cut(s)	28, 283, 292, 927, 1518, 1735
PleI	GAGTC	1 cut(s)	252
PpsI	GAGTC	1 cut(s)	252
PpuMI	RGGWCCY	1 cut(s)	1828
PscI	ACATGT	1 cut(s)	1299
Psp5II	RGGWCCY	1 cut(s)	1828
Psp6I	CCWGG	7 cut(s)	355, 469, 492, 1006, 1149, 1306, 1870
PspEI	GGTNACC	1 cut(s)	665
PspFI	CCCAGC	2 cut(s)	347, 1823
PspGI	CCWGG	7 cut(s)	355, 469, 492, 1006, 1149, 1306, 1870
PspN4I	GGNNCC	8 cut(s)	234, 364, 388, 830, 1829, 1830, 1852, 1919
PspPI	GGNCC	4 cut(s)	769, 977, 1814, 1828
PspPPI	RGGWCCY	1 cut(s)	1828
PstI	CTGCAG	1 cut(s)	286
PstNI	CAGNNNCTG	1 cut(s)	290
PsuI	RGATCY	4 cut(s)	222, 1154, 1290, 1877
RsaI	GTAC	3 cut(s)	577, 883, 1267
RsaNI	GTAC	3 cut(s)	576, 882, 1266
RseI	CAYNNNNRTG	5 cut(s)	807, 903, 1475, 1616, 1809
SapI	GCTCTTC	2 cut(s)	300, 1285
SaqAI	TTAA	5 cut(s)	129, 411, 657, 1086, 1766
SatI	GCNGC	6 cut(s)	27, 282, 291, 926, 1517, 1734
Sau3AI	GATC	9 cut(s)	222, 333, 515, 1070, 1154, 1290, 1624, 1862, 1877
Sau96I	GGNCC	4 cut(s)	769, 977, 1814, 1828
ScaI	AGTACT	1 cut(s)	883
SchI	GAGTC	1 cut(s)	253
ScrFI	CCNGG	8 cut(s)	357, 471, 494, 1008, 1151, 1270, 1308, 1872
SduI	GDGCHC	4 cut(s)	49, 831, 1853, 1922
SfaNI	GCATC	7 cut(s)	440, 562, 872, 937, 1204, 1320, 1503
SfcI	CTRYAG	2 cut(s)	50, 282
SfuI	TTCGAA	1 cut(s)	198
SinI	GGWCC	3 cut(s)	977, 1814, 1828
SmiMI	CAYNNNNRTG	5 cut(s)	807, 903, 1475, 1616, 1809
SmlI	CTYRAG	1 cut(s)	143
SmoI	CTYRAG	1 cut(s)	143
SsiI	CCGC	7 cut(s)	226, 572, 608, 692, 894, 1057, 1187
SspI	AATATT	1 cut(s)	415
SspMI	CTAG	3 cut(s)	1017, 1161, 1954
StyD4I	CCNGG	8 cut(s)	355, 469, 492, 1006, 1149, 1268, 1306, 1870
StyI	CCWWGG	2 cut(s)	102, 133
TaaI	ACNGT	6 cut(s)	719, 1125, 1382, 1541, 1688, 1785
TaiI	ACGT	1 cut(s)	1363
TaqI	TCGA	5 cut(s)	198, 514, 1328, 1543, 1882
TaqII	GACCGA	1 cut(s)	368
TatI	WGTACW	1 cut(s)	881
TfiI	GAWTC	4 cut(s)	161, 200, 485, 632
Tru1I	TTAA	5 cut(s)	129, 411, 657, 1086, 1766
Tru9I	TTAA	5 cut(s)	129, 411, 657, 1086, 1766
TscAI	CASTG	6 cut(s)	69, 677, 754, 1479, 1693, 1894
TseFI	GTSAC	2 cut(s)	754, 1212
TseI	GCWGC	6 cut(s)	26, 281, 290, 925, 1516, 1733
Tsp45I	GTSAC	2 cut(s)	754, 1212
TspGWI	ACGGA	2 cut(s)	861, 1200
TspRI	CASTG	6 cut(s)	69, 677, 754, 1479, 1693, 1894
Van91I	CCANNNNNTGG	2 cut(s)	948, 1823
VpaK11BI	GGWCC	3 cut(s)	977, 1814, 1828
XapI	RAATTY	5 cut(s)	263, 407, 955, 1315, 1756
XceI	RCATGY	3 cut(s)	1036, 1112, 1303
XcmI	CCANNNNNNNNNTGG	2 cut(s)	532, 1304
XmiI	GTMKAC	2 cut(s)	150, 1502
XmnI	GAANNNNTTC	1 cut(s)	1839
XspI	CTAG	3 cut(s)	1017, 1161, 1954
ZrmI	AGTACT	1 cut(s)	883
Zsp2I	ATGCAT	4 cut(s)	304, 532, 1114, 1609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.