Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0003328

Physical Location & Seq

Genomic Coordinates Reverse (-)

7361737 .. 7370731

Gene Structure 8995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG099400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2463 bp

ATGTCCATCTGTAACCAATTTCCACAAATATGCTTATTCATCATCTTAACATCTTTTTTCCCCCCTTTTTTTGCAGTGAGATTGCTAAAGGGTGATTTTGTATCTCATCAATCTACAAATACTGTTGCTTCCCAACATGAGGAAGAGCCCTTTGAATCGCTTGAAGAAATGGAAGCACAAACCATTGGAAATCTCCTTCCTGATGAAAATGATTTGTTTTCTGGCATGATAGATGGTCCGGGTAAAATTGTGCATGGTAGTAATGGGGACGAATTGGAAGATTTTGATCTTTTTAGCAGTGGTGGCGGCATGGAATTAGAAGGAGATGATCAAGGGGGTGGTAATTTTTCACTTGTGGGTGAACACCCCTATGGCGAGCACCCTTCTAGAACACTTTTTGTTCGAAATATTAATAGCAATGTTGAAGATTTGGAATTGAAGGATCTTTTTGAGCAATATGGAGATATCCGAACACTTTACACAGCCTGCAAGCATCGTGGGTTTGTTATGATTTCTTATTATGATATAAGGGCTGCCCAAAAAGCGATTAGAGCACTACAGAGTAAGCCACTGAGGCGTAGGAAGCTTGACATACACTATTCGATACCCAAGGACAACCCTTCTGATAAAGATGTTAACCAAGGAACACTTGAGGTATACAATGTTGATTCTTCTGTTTCTGATGATGAGCTTACTAAACTTTTCGAATCTTATGGGGAAATCAAAGAGATCCGCGAGGCTCCAAACAAGAGTCATAACAAGTTGATAGAATTTTATGATGTTAGAGCTGCAGAAGCTGCTCTTCATGCATTGAATACGAGTGAGATTGGTGGGAAGCAGATCAAGCTTGAACCCAGCCATCCTGGGGTTGCCAGAATGGGTTTCGGTCAAGGTTCCAAGCAGGAGCAAGATGAATTTAATATTTGTCATAGTCCATCCGACAACTTATCAGCAGGATGCAAGGCAACCCTTCATCCTGGAATGGCTAATGAATCTAACCTGGGATTACATTCTTCAATTCGATCACCTTCCAATGCATTTATGGGAAATGCTTTAGCGCATCTGAGTTCAAGTGTTCCGCGTACCTTGCCCTCTCCGATGAGAGTGGTGTCTGCGGACAAAAACTTTTGCCTTCCTGATTCCAATCACTCTCTGAATGAAATTAAGTTTGGTAACCAGTGCGTTCCCAATTTCCATCCGCATTCCCTCCCTGAGTATCATGACAGTTTAGCACATGGTATCACATCCAACTCCAGTGGAGTGACTGGCAATGTGGGCCTTAGAATGACAGAAGGAACCGACAGGAGGCACATTCGTGAAATGAATGCAAATGGGCACCTGATGGAACTGAACGGAGGAGGAGCTTTTGCATCTTCTGGAAATGGGAGTGCTGGGGTTCGTGGACATCATTATGTTTCCAATTCTTATCAGCAGCATCCTTCAAGTCCCATGATGTGGCAGAATTCACCATCATTTATCAATGGTCCTCATGCTCATCGCTTTCCACAAATGCCTGGCTTCCCTAGAACACCTCCTCACATGCTGAATGGGACATCACCTGTCCGCCACCATGTTGGATCAGCACCAGCAGTTGACCCTTCCCTTTGGGAAAGACATGCATTTTCAGGACAGTCTCCTGACACTTCTAGTCTTCACCTGGGATCTCCTAGCTTCGCCTGTTTTCCCAGTAGTCCCCAGTTGCATCCTATGGAAGTTCCATCACGCAACATCTTTTCTCTTGTTGGTGGAAATTGCTCAGACATGAATACAAGTACCCGGCAACGCTCTTCGCAGGAGATCTGCCACATGTTTCCTGGGAGGAATTCAATGATGTCGATGCCTACCTCTTTTGGTTCACCAAATGAACGTGTCAGAAATCTATCTCACCGTAGAAGTGAAGCAAACCCTCATAATGCTGATAGGAAACAATATGAACTTGATATTGAGCGCATATTGCGTGGGGATGACAATCGAACCACACTGATGATAAAGAACATTCCCAACAAGTATACTTCAAAGATGCTGCTTGCAGTAATTGATGAGAACTGTCGAGGAATATATGACTTTATTTATTTGCCAATTGACTTCAAGAACAAATGCAATGTGGGATATGCATTCATCAACATGATTGATCCTCAACAGATTGTTCCATTCTATAAGGCATTCAATGGCAAAAAATGGGAGAAGTTCAACAGTGAAAAGGTTGCAACACTTGCATATGCTCGTATTCAGGGAAAAGCTGCTCTTATTGCCCATTTCCAGAATTCAAGCTTAATGAATGAGGACAAACGGTGTCGCCCTATACTCTTCCACACAGATGGACCAAATGCTGGGGACCCGGAACCCTTTCCAATGGGCACCCACATCCGATCAAGACCAGGAAGATCTCGAACCAGTGGCTATGAGGAAAGCCATAACCAATGGAGCCCATCTTCATCTGCAAATGGAGAGGAAAGTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0008150 GO:0010564 GO:0010638 GO:0033043 GO:0040008 GO:0040020 GO:0045787 GO:0045836 GO:0045927 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051445 GO:0051446 GO:0051726 GO:0051783 GO:0051785 GO:0065007 GO:0090068 GO:0097159 GO:1901363 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 RRM_2

Protein Analysis

820

Amino Acids

90.99

Weight (kDa)

6.23

Isoelectric Point (pI)

55.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	132 - 196	2.4e-11	RNA recognition motif
RRM_1	PF00076	219 - 282	1.9e-08	RNA recognition motif
RRM_2	PF04059	658 - 754	5.7e-54	RNA recognition motif 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07290 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960 AT5G61960
fragaria_vesca	FvH4_5g09460
malus_domestica	MD06G1131000.v1.1 MD14G1147600.v1.1
prunus_persica	Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1 Prupe.5G142200_v2.0.a1
pyrus_communis	pycom06g12260 pycom14g12230
rosa_chinensis	RchiOBHm_Chr7g0188731
rosa_laevigata	RLG00000004666
rosa_multiflora	Rmu_sc0003854.1_g000006
rosa_roxburghii	Rroxscaffold_3G00266090
rosa_rugosa	Rorug06G0493200.1 Rorug06G0493300.1 Rorug06G0493400 Rorug06G0493400 Rorug06G0493500
rosa_samantha	Rh7AG098000 Rh7BG099400 Rh7CG101200 Rh7DG099800
rosa_wichuraiana	Rw7G008440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1335, 2357
AccB7I	CCANNNNNTGG	2 cut(s)	1455, 2330
AccI	GTMKAC	2 cut(s)	657, 2009
AccII	CGCG	2 cut(s)	735, 1081
AciI	CCGC	6 cut(s)	306, 733, 1079, 1115, 1199, 1564
AclWI	GGATC	5 cut(s)	450, 724, 1585, 1669, 2126
AcsI	RAATTY	5 cut(s)	770, 914, 1462, 1822, 2263
AfaI	GTAC	2 cut(s)	1084, 1774
AfiI	CCNNNNNNNGG	5 cut(s)	139, 865, 1305, 1455, 2330
AflIII	ACRYGT	2 cut(s)	1806, 1867
AjnI	CCWGG	7 cut(s)	862, 976, 999, 1513, 1656, 1813, 2377
AjuI	GAANNNNNNNTTGG	2 cut(s)	1152, 1184
AleI	CACNNNNGTG	1 cut(s)	1314
AluBI	AGCT	9 cut(s)	586, 691, 788, 797, 847, 1364, 1671, 2240, 2271
AluI	AGCT	9 cut(s)	586, 691, 788, 797, 847, 1364, 1671, 2240, 2271
Alw21I	GWGCWC	2 cut(s)	381, 556
Alw26I	GTCTC	1 cut(s)	1638
AlwI	GGATC	5 cut(s)	450, 724, 1585, 1669, 2126
AlwNI	CAGNNNCTG	1 cut(s)	797
AoxI	GGCC	1 cut(s)	1276
ApeKI	GCWGC	6 cut(s)	533, 788, 797, 1432, 2023, 2240
ApoI	RAATTY	5 cut(s)	770, 914, 1462, 1822, 2263
AseI	ATTAAT	1 cut(s)	411
Asp700I	GAANNNNTTC	1 cut(s)	2346
AspLEI	GCGC	2 cut(s)	1060, 1950
AspS9I	GGNCC	5 cut(s)	236, 1276, 1484, 2321, 2335
AsuC2I	CCSGG	3 cut(s)	240, 1777, 2339
AsuHPI	GGTGA	8 cut(s)	104, 371, 1017, 1458, 1548, 1646, 1848, 1877
AsuII	TTCGAA	2 cut(s)	403, 705
AvaII	GGWCC	4 cut(s)	236, 1484, 2321, 2335
BaeGI	GKGCMC	2 cut(s)	1338, 2360
BanI	GGYRCC	2 cut(s)	1335, 2357
BanII	GRGCYC	2 cut(s)	150, 2429
BbsI	GAAGAC	1 cut(s)	1643
Bbv12I	GWGCWC	2 cut(s)	381, 556
BbvI	GCAGC	6 cut(s)	520, 775, 784, 1444, 2010, 2227
BciT130I	CCWGG	7 cut(s)	864, 978, 1001, 1515, 1658, 1815, 2379
BclI	TGATCA	1 cut(s)	328
BcnI	CCSGG	3 cut(s)	240, 1777, 2339
BcoDI	GTCTC	1 cut(s)	1638
BfaI	CTAG	5 cut(s)	387, 1524, 1647, 1668, 2461
BfmI	CTRYAG	2 cut(s)	557, 789
BglI	GCCNNNNNGGC	1 cut(s)	574
BglII	AGATCT	2 cut(s)	1797, 2384
BisI	GCNGC	7 cut(s)	307, 534, 789, 798, 1433, 2024, 2241
BlsI	GCNGC	7 cut(s)	308, 535, 790, 799, 1434, 2025, 2242
Bme18I	GGWCC	4 cut(s)	236, 1484, 2321, 2335
BmgT120I	GGNCC	5 cut(s)	236, 1276, 1484, 2321, 2335
BmiI	GGNNCC	9 cut(s)	741, 895, 1297, 1337, 2336, 2337, 2343, 2359, 2426
BmrI	ACTGGG	2 cut(s)	1680, 1690
BmsI	GCATC	8 cut(s)	502, 947, 1069, 1379, 1444, 1711, 1827, 2010
BmuI	ACTGGG	2 cut(s)	1680, 1690
BpiI	GAAGAC	1 cut(s)	1643
BpmI	CTGGAG	1 cut(s)	1237
Bpu14I	TTCGAA	2 cut(s)	403, 705
BpuEI	CTTGAG	1 cut(s)	671
BpuMI	CCSGG	3 cut(s)	240, 1777, 2339
BsaBI	GATNNNNATC	3 cut(s)	285, 1143, 1968
BsaJI	CCNNGG	6 cut(s)	609, 640, 863, 1000, 1657, 1814
Bsc4I	CCNNNNNNNGG	5 cut(s)	139, 865, 1305, 1455, 2330
Bse1I	ACTGG	6 cut(s)	1177, 1254, 1270, 1686, 1696, 2394
Bse3DI	GCAATG	3 cut(s)	424, 1276, 2107
Bse8I	GATNNNNATC	3 cut(s)	285, 1143, 1968
BseBI	CCWGG	7 cut(s)	864, 978, 1001, 1515, 1658, 1815, 2379
BseDI	CCNNGG	6 cut(s)	609, 640, 863, 1000, 1657, 1814
BseJI	GATNNNNATC	3 cut(s)	285, 1143, 1968
BseLI	CCNNNNNNNGG	5 cut(s)	139, 865, 1305, 1455, 2330
BseMI	GCAATG	3 cut(s)	424, 1276, 2107
BseMII	CTCAG	4 cut(s)	563, 1055, 1203, 1770
BseNI	ACTGG	6 cut(s)	1177, 1254, 1270, 1686, 1696, 2394
BseRI	GAGGAG	3 cut(s)	1371, 1374, 1524
BseSI	GKGCMC	2 cut(s)	1338, 2360
BseXI	GCAGC	6 cut(s)	520, 775, 784, 1444, 2010, 2227
BseYI	CCCAGC	3 cut(s)	854, 1391, 2330
Bsh1236I	CGCG	2 cut(s)	735, 1081
BshFI	GGCC	1 cut(s)	1278
BshNI	GGYRCC	2 cut(s)	1335, 2357
BsiHKAI	GWGCWC	2 cut(s)	381, 556
BsiSI	CCGG	3 cut(s)	239, 1777, 2339
BslFI	GGGAC	5 cut(s)	281, 1431, 1564, 1677, 2348
BslI	CCNNNNNNNGG	5 cut(s)	139, 865, 1305, 1455, 2330
BsmAI	GTCTC	1 cut(s)	1638
BsmFI	GGGAC	5 cut(s)	281, 1431, 1564, 1677, 2348
BsmI	GAATGC	4 cut(s)	1201, 1330, 2114, 2162
BsnI	GGCC	1 cut(s)	1278
Bsp119I	TTCGAA	2 cut(s)	403, 705
Bsp1286I	GDGCHC	6 cut(s)	150, 381, 556, 1338, 2360, 2429
BspACI	CCGC	6 cut(s)	306, 733, 1079, 1115, 1199, 1564
BspANI	GGCC	1 cut(s)	1278
BspCNI	CTCAG	4 cut(s)	564, 1056, 1204, 1769
BspFNI	CGCG	2 cut(s)	735, 1081
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	9 cut(s)	741, 895, 1297, 1337, 2336, 2337, 2343, 2359, 2426
BspMAI	CTGCAG	1 cut(s)	793
BspPI	GGATC	5 cut(s)	450, 724, 1585, 1669, 2126
BspQI	GCTCTTC	3 cut(s)	138, 807, 1792
BspT104I	TTCGAA	2 cut(s)	403, 705
BspT107I	GGYRCC	2 cut(s)	1335, 2357
BsrDI	GCAATG	3 cut(s)	424, 1276, 2107
BsrI	ACTGG	6 cut(s)	1177, 1254, 1270, 1686, 1696, 2394
BssECI	CCNNGG	6 cut(s)	609, 640, 863, 1000, 1657, 1814
BssNAI	GTATAC	2 cut(s)	658, 2010
BssT1I	CCWWGG	2 cut(s)	609, 640
Bst1107I	GTATAC	2 cut(s)	658, 2010
Bst2UI	CCWGG	7 cut(s)	864, 978, 1001, 1515, 1658, 1815, 2379
Bst4CI	ACNGT	7 cut(s)	124, 1226, 1632, 1889, 2048, 2195, 2292
Bst6I	CTCTTC	4 cut(s)	138, 807, 1792, 2312
BstAPI	GCANNNNNTGC	2 cut(s)	797, 2213
BstBI	TTCGAA	2 cut(s)	403, 705
BstC8I	GCNNGC	4 cut(s)	377, 487, 491, 2028
BstDEI	CTNAG	5 cut(s)	572, 1064, 1212, 1280, 1756
BstEII	GGTNACC	1 cut(s)	1172
BstFNI	CGCG	2 cut(s)	735, 1081
BstHHI	GCGC	2 cut(s)	1060, 1950
BstMAI	GTCTC	1 cut(s)	1638
BstNI	CCWGG	7 cut(s)	864, 978, 1001, 1515, 1658, 1815, 2379
BstNSI	RCATGY	3 cut(s)	1543, 1619, 1810
BstPI	GGTNACC	1 cut(s)	1172
BstSFI	CTRYAG	2 cut(s)	557, 789
BstSLI	GKGCMC	2 cut(s)	1338, 2360
BstUI	CGCG	2 cut(s)	735, 1081
BstV1I	GCAGC	6 cut(s)	520, 775, 784, 1444, 2010, 2227
BstV2I	GAAGAC	1 cut(s)	1643
BstX2I	RGATCY	5 cut(s)	442, 729, 1661, 1797, 2384
BstXI	CCANNNNNNTGG	2 cut(s)	1574, 2318
BstYI	RGATCY	5 cut(s)	442, 729, 1661, 1797, 2384
BstZ17I	GTATAC	2 cut(s)	658, 2010
BsuRI	GGCC	1 cut(s)	1278
BtgZI	GCGATG	1 cut(s)	1481
BtsI	GCAGTG	2 cut(s)	81, 304
BtsIMutI	CAGTG	8 cut(s)	81, 304, 569, 1184, 1261, 1979, 2200, 2401
Cac8I	GCNNGC	4 cut(s)	377, 487, 491, 2028
CaiI	CAGNNNCTG	1 cut(s)	797
CciI	TCATGA	1 cut(s)	1219
CfoI	GCGC	2 cut(s)	1060, 1950
Cfr13I	GGNCC	5 cut(s)	236, 1276, 1484, 2321, 2335
Csp6I	GTAC	2 cut(s)	1083, 1773
CspCI	CAANNNNNGTGG	4 cut(s)	478, 513, 1237, 1272
CviQI	GTAC	2 cut(s)	1083, 1773
DdeI	CTNAG	5 cut(s)	572, 1064, 1212, 1280, 1756
Eam1104I	CTCTTC	4 cut(s)	138, 807, 1792, 2312
EarI	CTCTTC	4 cut(s)	138, 807, 1792, 2312
EciI	GGCGGA	1 cut(s)	1553
Eco130I	CCWWGG	2 cut(s)	609, 640
Eco24I	GRGCYC	2 cut(s)	150, 2429
Eco32I	GATATC	1 cut(s)	466
Eco47I	GGWCC	4 cut(s)	236, 1484, 2321, 2335
Eco91I	GGTNACC	1 cut(s)	1172
EcoO109I	RGGNCCY	1 cut(s)	2335
EcoO65I	GGTNACC	1 cut(s)	1172
EcoRI	GAATTC	3 cut(s)	1462, 1822, 2263
EcoRII	CCWGG	7 cut(s)	862, 976, 999, 1513, 1656, 1813, 2377
EcoRV	GATATC	1 cut(s)	466
EcoT14I	CCWWGG	2 cut(s)	609, 640
EcoT22I	ATGCAT	4 cut(s)	811, 1039, 1621, 2116
EcoT38I	GRGCYC	2 cut(s)	150, 2429
ErhI	CCWWGG	2 cut(s)	609, 640
FalI	AAGNNNNNCTT	6 cut(s)	633, 665, 786, 818, 2229, 2261
FaqI	GGGAC	5 cut(s)	281, 1431, 1564, 1677, 2348
FauNDI	CATATG	1 cut(s)	2218
FbaI	TGATCA	1 cut(s)	328
FblI	GTMKAC	2 cut(s)	657, 2009
Fnu4HI	GCNGC	7 cut(s)	307, 534, 789, 798, 1433, 2024, 2241
FriOI	GRGCYC	2 cut(s)	150, 2429
Fsp4HI	GCNGC	7 cut(s)	307, 534, 789, 798, 1433, 2024, 2241
FspBI	CTAG	5 cut(s)	387, 1524, 1647, 1668, 2461
GlaI	GCGC	2 cut(s)	1059, 1949
GluI	GCNGC	7 cut(s)	307, 534, 789, 798, 1433, 2024, 2241
GsaI	CCCAGC	3 cut(s)	858, 1395, 2334
GsuI	CTGGAG	1 cut(s)	1237
HaeIII	GGCC	1 cut(s)	1278
HapII	CCGG	3 cut(s)	239, 1777, 2339
HhaI	GCGC	2 cut(s)	1060, 1950
Hin6I	GCGC	2 cut(s)	1058, 1948
HinP1I	GCGC	2 cut(s)	1058, 1948
HincII	GTYRAC	2 cut(s)	637, 1594
HindII	GTYRAC	2 cut(s)	637, 1594
HindIII	AAGCTT	3 cut(s)	584, 845, 2269
HinfI	GANTC	6 cut(s)	155, 668, 707, 751, 992, 1139
HpaI	GTTAAC	1 cut(s)	637
HpaII	CCGG	3 cut(s)	239, 1777, 2339
HphI	GGTGA	8 cut(s)	104, 371, 1017, 1458, 1548, 1646, 1848, 1877
Hpy166II	GTNNAC	7 cut(s)	362, 637, 658, 1403, 1594, 1856, 2010
Hpy8I	GTNNAC	7 cut(s)	362, 637, 658, 1403, 1594, 1856, 2010
HpyCH4III	ACNGT	7 cut(s)	124, 1226, 1632, 1889, 2048, 2195, 2292
HpyCH4IV	ACGT	1 cut(s)	1867
HpyF3I	CTNAG	5 cut(s)	572, 1064, 1212, 1280, 1756
HpySE526I	ACGT	1 cut(s)	1867
HspAI	GCGC	2 cut(s)	1058, 1948
KflI	GGGWCCC	1 cut(s)	2335
Ksp22I	TGATCA	1 cut(s)	328
KspAI	GTTAAC	1 cut(s)	637
LguI	GCTCTTC	3 cut(s)	138, 807, 1792
LmnI	GCTCC	4 cut(s)	745, 904, 1361, 2424
Lsp1109I	GCAGC	6 cut(s)	520, 775, 784, 1444, 2010, 2227
LweI	GCATC	8 cut(s)	502, 947, 1069, 1379, 1444, 1711, 1827, 2010
MaeI	CTAG	5 cut(s)	387, 1524, 1647, 1668, 2461
MaeII	ACGT	1 cut(s)	1867
MaeIII	GTNAC	3 cut(s)	11, 1172, 1261
MfeI	CAATTG	1 cut(s)	2079
MflI	RGATCY	5 cut(s)	442, 729, 1661, 1797, 2384
MhlI	GDGCHC	6 cut(s)	150, 381, 556, 1338, 2360, 2429
MlyI	GAGTC	1 cut(s)	760
MmeI	TCCRAC	3 cut(s)	963, 1272, 1555
Mph1103I	ATGCAT	4 cut(s)	811, 1039, 1621, 2116
MroXI	GAANNNNTTC	1 cut(s)	2346
MseI	TTAA	6 cut(s)	47, 411, 636, 918, 1164, 2273
MslI	CAYNNNNRTG	7 cut(s)	28, 369, 1314, 1410, 1982, 2123, 2316
MspI	CCGG	3 cut(s)	239, 1777, 2339
MunI	CAATTG	1 cut(s)	2079
Mva1269I	GAATGC	4 cut(s)	1201, 1330, 2114, 2162
MvaI	CCWGG	7 cut(s)	864, 978, 1001, 1515, 1658, 1815, 2379
MvnI	CGCG	2 cut(s)	735, 1081
NciI	CCSGG	3 cut(s)	240, 1777, 2339
NdeI	CATATG	1 cut(s)	2218
NlaIV	GGNNCC	9 cut(s)	741, 895, 1297, 1337, 2336, 2337, 2343, 2359, 2426
NmuCI	GTSAC	1 cut(s)	1261
NsiI	ATGCAT	4 cut(s)	811, 1039, 1621, 2116
NspI	RCATGY	3 cut(s)	1543, 1619, 1810
NspV	TTCGAA	2 cut(s)	403, 705
OliI	CACNNNNGTG	1 cut(s)	1314
PagI	TCATGA	1 cut(s)	1219
PciI	ACATGT	1 cut(s)	1806
PciSI	GCTCTTC	3 cut(s)	138, 807, 1792
PctI	GAATGC	4 cut(s)	1201, 1330, 2114, 2162
PdmI	GAANNNNTTC	1 cut(s)	2346
PfeI	GAWTC	5 cut(s)	155, 668, 707, 992, 1139
PflMI	CCANNNNNTGG	2 cut(s)	1455, 2330
PfoI	TCCNGGA	1 cut(s)	976
PkrI	GCNGC	7 cut(s)	308, 535, 790, 799, 1434, 2025, 2242
PleI	GAGTC	1 cut(s)	759
PpsI	GAGTC	1 cut(s)	759
PpuMI	RGGWCCY	1 cut(s)	2335
PscI	ACATGT	1 cut(s)	1806
PshBI	ATTAAT	1 cut(s)	411
Psp5II	RGGWCCY	1 cut(s)	2335
Psp6I	CCWGG	7 cut(s)	862, 976, 999, 1513, 1656, 1813, 2377
PspEI	GGTNACC	1 cut(s)	1172
PspFI	CCCAGC	3 cut(s)	854, 1391, 2330
PspGI	CCWGG	7 cut(s)	862, 976, 999, 1513, 1656, 1813, 2377
PspN4I	GGNNCC	9 cut(s)	741, 895, 1297, 1337, 2336, 2337, 2343, 2359, 2426
PspPI	GGNCC	5 cut(s)	236, 1276, 1484, 2321, 2335
PspPPI	RGGWCCY	1 cut(s)	2335
PstI	CTGCAG	1 cut(s)	793
PstNI	CAGNNNCTG	1 cut(s)	797
PsuI	RGATCY	5 cut(s)	442, 729, 1661, 1797, 2384
RsaI	GTAC	2 cut(s)	1084, 1774
RsaNI	GTAC	2 cut(s)	1083, 1773
RseI	CAYNNNNRTG	7 cut(s)	28, 369, 1314, 1410, 1982, 2123, 2316
SapI	GCTCTTC	3 cut(s)	138, 807, 1792
SaqAI	TTAA	6 cut(s)	47, 411, 636, 918, 1164, 2273
SatI	GCNGC	7 cut(s)	307, 534, 789, 798, 1433, 2024, 2241
Sau96I	GGNCC	5 cut(s)	236, 1276, 1484, 2321, 2335
SchI	GAGTC	1 cut(s)	760
SduI	GDGCHC	6 cut(s)	150, 381, 556, 1338, 2360, 2429
SfaNI	GCATC	8 cut(s)	502, 947, 1069, 1379, 1444, 1711, 1827, 2010
SfcI	CTRYAG	2 cut(s)	557, 789
SfuI	TTCGAA	2 cut(s)	403, 705
SinI	GGWCC	4 cut(s)	236, 1484, 2321, 2335
SmiMI	CAYNNNNRTG	7 cut(s)	28, 369, 1314, 1410, 1982, 2123, 2316
SmlI	CTYRAG	1 cut(s)	650
SmoI	CTYRAG	1 cut(s)	650
SsiI	CCGC	6 cut(s)	306, 733, 1079, 1115, 1199, 1564
SspI	AATATT	2 cut(s)	409, 922
SspMI	CTAG	5 cut(s)	387, 1524, 1647, 1668, 2461
StyI	CCWWGG	2 cut(s)	609, 640
TaaI	ACNGT	7 cut(s)	124, 1226, 1632, 1889, 2048, 2195, 2292
TaiI	ACGT	1 cut(s)	1870
TaqI	TCGA	8 cut(s)	403, 602, 705, 1021, 1835, 1972, 2050, 2389
TaqII	GACCGA	1 cut(s)	875
TauI	GCSGC	1 cut(s)	309
TfiI	GAWTC	5 cut(s)	155, 668, 707, 992, 1139
Tru1I	TTAA	6 cut(s)	47, 411, 636, 918, 1164, 2273
Tru9I	TTAA	6 cut(s)	47, 411, 636, 918, 1164, 2273
TscAI	CASTG	8 cut(s)	81, 304, 576, 1184, 1261, 1986, 2200, 2401
TseFI	GTSAC	1 cut(s)	1261
TseI	GCWGC	6 cut(s)	533, 788, 797, 1432, 2023, 2240
Tsp45I	GTSAC	1 cut(s)	1261
TspGWI	ACGGA	1 cut(s)	1368
TspRI	CASTG	8 cut(s)	81, 304, 576, 1184, 1261, 1986, 2200, 2401
Van91I	CCANNNNNTGG	2 cut(s)	1455, 2330
VpaK11BI	GGWCC	4 cut(s)	236, 1484, 2321, 2335
VspI	ATTAAT	1 cut(s)	411
XapI	RAATTY	5 cut(s)	770, 914, 1462, 1822, 2263
XbaI	TCTAGA	1 cut(s)	386
XceI	RCATGY	3 cut(s)	1543, 1619, 1810
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1039, 1811
XmiI	GTMKAC	2 cut(s)	657, 2009
XmnI	GAANNNNTTC	1 cut(s)	2346
XspI	CTAG	5 cut(s)	387, 1524, 1647, 1668, 2461
Zsp2I	ATGCAT	4 cut(s)	811, 1039, 1621, 2116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.