Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0006614

Physical Location & Seq

Genomic Coordinates Reverse (-)

18247650 .. 18257708

Gene Structure 10059 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGGAGCTCCAGAACACAGTGAAAGACGCCCTCAACGCACTCTACCATCACCCCGACGACGGCGTCCGCCTGCAGGCCGATCGCTGGCTGCAGGACTTCCAGCGGACGCTCGACGCCTGGCAGGTTGCTGATAACTTGCTTCATGATGCAACTAGCAATCTAGAAACTTTAATATTTTGTTCGCAGACCCTTAGAAGCAAGGTACAACAAGATTTTGAAGAACTACAGTCTGAAGCTTTTTGCCCATTACGTGATTCGTTAAATAACTTATTGAGAAAATTCCACAAAGGCCCCCCTAAAGTCAGAACTCAGATTAGCATTGCTGTGGCTGCTTTGGCTGTACATGTTAGCACTGAAGATTGGGGGGATGGTGGTATTGTGAAGTGGCTTCGTGAGGAGATGAATTTGCATCCAGAGTTTATACCAGGATTTTTGGAGTTACTAACAGTTTTGCCTGAGGAAGTATTCAATTACAAAATTGCAGCTCGCCCGGAAAGACGCCGCCAATTTGAAAAAGAGCTTACTTCACAAATGGAGATTGCTCTAAACATCCTGACAGCCTGTTTGAATATTAATGAGCTTAAGGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGACTGAAGCATGGGATCCCTGGATCTGTGCTTGCATCCCATCCATTGGTGCTCACAGCCCTCTCAAGCTTGAATTCTGAGCTACTTTCAGAGGCCGCAGTAAATGTTATATCTGAATTGATACACTATACAGCAGCTGGAAGCTCTGGTGGTGTTTCTGTGCAGATGCCCTTAATTCAAGTGCTTGTCCCTCAAGTAATGAATCTTAAGGGACAGCTAAGAGATTCTTCAAAGGATGAGGAAGATGTGAAGGCCATTGCTCGCTTATTTTCGGACATGGGTGATTCATATGTTGAACTTATTGCAACTGCTGAGAGAAATAGAAGGCTGCAAGTTTTTCGTCCAGCTTATGAGTCACTTGTATCCTTAGTAAGCTTTCGGATTCAATATCCTCAAGATTATCAGGACCTTTCATATGAAGATCTTAAGGAGTTTAAGCAGACTAGATATGCTGTTGCAGATGTCTTAATTGATGCAGCATCAGTTTTAGGGGGTGATGCAACACTTAGAATTCTTTACATGAAGCTTGATGAGGCTGCAGCTTGCTGTCACAATGAGCAAAGTGAATGGCGCCCAGCGGAAGCTGCTTTGTTCGGCATCCGGGCTATATCAACTTATGTTTCAACAGTAGAAGCTGAAGTAATGCCCAAGGTTATGGATAGGCTGCTAAAACTACCTCAGCATCCTCAACTACTTCAGACAGTTTGCTTAACTATTGGAGCATATTCAAAGTGGCTTGATGCTGCATCCGGCGGACTGTCCATACTGCCTTCAGTTCTACATATCCTCATGACTGGCATGGGTATATCTGAAGATTCTGCAGCAGCTGCAGCTGTAGCATTTAGACAGATTTGTGATGATTGCCGGTTAAAGCTCTCTGGATGTTTGGATGGACTCTTCCATATATACCATAGGGCAGTGAATGGTGAAGGCAGTTTTAAGGTCTCTGCTGATGATTCACTACATCTAGTTGAAGCCTTAAGCAAGGTCATTACTGAACTTCCCCCAGATCAAGCTAAGAGGGCTTTGGAGGCCTTGTGCTTGCCTGTTGTTACTCCTTTACAGGAAGCTGTCCGCCAAGGCCCAGACACGCTAAATAGCAAACCTGCTCGTGATTTAACCGTTCACATCGATCGATTTGGATACATCGTTAGGTATGTGAATCATGCAGAAGCTGTGGCAGATGCAATTCAAAGACTATGGCCACTTTTTAAAGCCATATTTGATATTCGTGCTTGGGATATGCCGACAATGGAGTCTCTGTGCCGAGCTTGCAAATATGCTGTGAGGACTTCTGGAAGGTACATGAAATTTACAATTGGAGCAATGCTGGAGGAGATTCAAGGTTTATATCAACAGCATCACCAACCATGCTTCCTCTATTTATCTAGTGAAATATTTGGTTCTGACCCATCTTGTGCAAATTATTTGAAAAGTTTGATTGAAGCACTTTTTGTGCACACCACACATCTTCTCACTAGCATTCAGGAATTTACTGCGAGACCTGATATAGCAGATGATTGTTTTCTGTTGGCATCAAGATGCATTCGCTATTGTCCTCAATTATTTATTCCATCTGCTGTATTTCCATCATTAGTAGATTGCTCGCTGATTGGGATTACAGTGCAGCACAGAGAGGCATCAAAGTCAATATTAACGTTTTTATCCGATATATTTGATCTTGCAAACTCTGCCGAGAGAAAACAATACTTACCAATCAGGAATTCTGTCATTATTCCTCGAGGGTCCAGCATCACAAGAATCTTAATTGCTTCACTAACAGGAGCACTGCCAAGCTCCCGACTAGAACTGGTAACCTACACACTACTATCTTTATCTCGAGCTTATGGGCCACAGTCAGTAGAGTGGGCCAAGGAGAGTGTTTCTTTAATTCCTTTGACGGCTGTGACAGAAGTTGAGCGTTCGAGATTCTTGAAAGCATTGTCAGACGCTGCGTCTGGGTCTAACTTTAATGCTCTATCTGTTCCAATTGAGGACCTATCGGATGTTTGCCGCCGTAATAGAACAGTTACGGAGATTGTTCAACAATCATTGAGGCCACTTGAGTTGAGCATAGCACCTGTATCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0010468 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

903

Amino Acids

100.49

Weight (kDa)

5.58

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	98 - 243	1.1e-20	Exportin 1-like protein
TPR_TNPO3_IPO13_3rd	PF24140	419 - 508	1.1e-07	Transportin-3/Importin-13 third TPR domain
TPR_TNPO3_IPO13_4th	PF24139	601 - 697	3.8e-14	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62600
fragaria_vesca	FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030
malus_domestica	MD06G1183500.v1.1 MD14G1189400.v1.1
prunus_persica	Prupe.5G182200_v2.0.a1 Prupe.6G220700_v2.0.a1
pyrus_communis	pycom06g16250 pycom14g15710
rosa_chinensis	RchiOBHm_Chr7g0180041
rosa_laevigata	RLG00000005300
rosa_multiflora	Rmu_co8039046.1_g000001 Rmu_ssc0000119.1_g000007 Rmu_ssc0000119.1_g000020 Rmu_ssc0000119.1_g000024
rosa_roxburghii	Rroxscaffold_3G00273180
rosa_rugosa	Rorug06G0430100
rosa_samantha	Rh7AG030300 Rh7BG030200 Rh7CG032000 Rh7DG031000
rosa_wichuraiana	Rw7G002520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	62, 1873
AbsI	CCTCGAGG	1 cut(s)	2358
Acc36I	ACCTGC	3 cut(s)	112, 580, 1732
AccB1I	GGYRCC	1 cut(s)	1188
AccB7I	CCANNNNNTGG	1 cut(s)	664
AciI	CCGC	8 cut(s)	67, 103, 502, 714, 1196, 1371, 1693, 2632
AclI	AACGTT	1 cut(s)	2276
AclWI	GGATC	3 cut(s)	628, 641, 649
AcoI	YGGCCR	1 cut(s)	1820
AcsI	RAATTY	7 cut(s)	278, 403, 691, 1128, 1928, 2108, 2341
AcuI	CTGAAG	7 cut(s)	252, 375, 644, 1275, 1298, 1374, 1449
AcyI	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
AfaI	GTAC	3 cut(s)	204, 342, 1922
AfiI	CCNNNNNNNGG	4 cut(s)	59, 73, 84, 664
AflII	CTTAAG	4 cut(s)	581, 824, 1043, 1597
AflIII	ACRYGT	1 cut(s)	343
AhdI	GACNNNNNGTC	1 cut(s)	2572
AjnI	CCWGG	3 cut(s)	116, 424, 637
AjuI	GAANNNNNNNTTGG	2 cut(s)	2326, 2358
Alw21I	GWGCWC	4 cut(s)	9, 672, 2079, 2407
Alw26I	GTCTC	3 cut(s)	1567, 1881, 2113
Alw44I	GTGCAC	1 cut(s)	2075
AlwI	GGATC	3 cut(s)	628, 641, 649
AlwNI	CAGNNNCTG	4 cut(s)	755, 1445, 1793, 2570
Ama87I	CYCGRG	2 cut(s)	2358, 2457
ApaLI	GTGCAC	1 cut(s)	2075
ApoI	RAATTY	7 cut(s)	278, 403, 691, 1128, 1928, 2108, 2341
ArsI	GACNNNNNNTTYG	2 cut(s)	547, 579
AseI	ATTAAT	1 cut(s)	573
AspLEI	GCGC	1 cut(s)	1191
AspS9I	GGNCC	7 cut(s)	290, 1024, 1700, 2364, 2468, 2487, 2614
AsuC2I	CCSGG	2 cut(s)	491, 1220
AsuHPI	GGTGA	5 cut(s)	41, 911, 1124, 1556, 1973
AvaI	CYCGRG	2 cut(s)	2358, 2457
AvaII	GGWCC	3 cut(s)	1024, 2364, 2614
AxyI	CCTNAGG	1 cut(s)	456
BaeGI	GKGCMC	1 cut(s)	2079
BalI	TGGCCA	1 cut(s)	1822
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	1 cut(s)	1188
BanII	GRGCYC	1 cut(s)	9
BauI	CACGAG	1 cut(s)	1728
Bbv12I	GWGCWC	4 cut(s)	9, 672, 2079, 2407
BbvCI	CCTCAGC	1 cut(s)	1296
BccI	CCATC	7 cut(s)	54, 362, 666, 1502, 2038, 2200, 2215
BceAI	ACGGC	3 cut(s)	76, 2535, 2619
BcgI	CGANNNNNNTGC	5 cut(s)	62, 96, 938, 972, 2685
BciT130I	CCWGG	3 cut(s)	118, 426, 639
BciVI	GTATCC	2 cut(s)	991, 1754
BcnI	CCSGG	2 cut(s)	491, 1220
BcoDI	GTCTC	3 cut(s)	1567, 1881, 2113
BfaI	CTAG	7 cut(s)	153, 161, 1062, 1586, 2007, 2097, 2423
BfmI	CTRYAG	7 cut(s)	71, 89, 224, 1155, 1437, 1446, 1452
BfoI	RGCGCY	1 cut(s)	1192
BfrI	CTTAAG	4 cut(s)	581, 824, 1043, 1597
BfuAI	ACCTGC	3 cut(s)	112, 580, 1732
BfuI	GTATCC	2 cut(s)	991, 1754
BglII	AGATCT	1 cut(s)	1039
Bme1390I	CCNGG	5 cut(s)	118, 426, 491, 639, 1220
Bme18I	GGWCC	3 cut(s)	1024, 2364, 2614
BmeRI	GACNNNNNGTC	1 cut(s)	2572
BmeT110I	CYCGRG	2 cut(s)	2358, 2457
BmgT120I	GGNCC	7 cut(s)	290, 1024, 1700, 2364, 2468, 2487, 2614
BmiI	GGNNCC	4 cut(s)	292, 635, 1190, 2365
BmrFI	CCNGG	5 cut(s)	118, 426, 491, 639, 1220
BpmI	CTGGAG	1 cut(s)	1970
Bpu10I	CCTNAGC	1 cut(s)	1296
BpuEI	CTTGAG	5 cut(s)	617, 667, 795, 996, 2702
BpuMI	CCSGG	2 cut(s)	491, 1220
Bsa29I	ATCGAT	2 cut(s)	1749, 1753
BsaAI	YACGTR	1 cut(s)	251
BsaHI	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
BsaI	GGTCTC	2 cut(s)	1567, 2113
BsaJI	CCNNGG	4 cut(s)	637, 1266, 1696, 2490
BsaXI	ACNNNNNCTCC	4 cut(s)	1640, 1670, 1865, 1895
Bsc4I	CCNNNNNNNGG	4 cut(s)	59, 73, 84, 664
Bse118I	RCCGGY	1 cut(s)	1482
Bse1I	ACTGG	2 cut(s)	1417, 2433
Bse21I	CCTNAGG	1 cut(s)	456
Bse3DI	GCAATG	3 cut(s)	318, 873, 1950
BseBI	CCWGG	3 cut(s)	118, 426, 639
BseCI	ATCGAT	2 cut(s)	1749, 1753
BseDI	CCNNGG	4 cut(s)	637, 1266, 1696, 2490
BseLI	CCNNNNNNNGG	4 cut(s)	59, 73, 84, 664
BseMI	GCAATG	3 cut(s)	318, 873, 1950
BseMII	CTCAG	5 cut(s)	323, 447, 687, 921, 1310
BseNI	ACTGG	2 cut(s)	1417, 2433
BseRI	GAGGAG	2 cut(s)	410, 1967
BseSI	GKGCMC	1 cut(s)	2079
BseYI	CCCAGC	1 cut(s)	1192
BsgI	GTGCAG	2 cut(s)	800, 2264
Bsh1285I	CGRYCG	2 cut(s)	82, 1753
BshNI	GGYRCC	1 cut(s)	1188
BshVI	ATCGAT	2 cut(s)	1749, 1753
BsiEI	CGRYCG	2 cut(s)	82, 1753
BsiHKAI	GWGCWC	4 cut(s)	9, 672, 2079, 2407
BsiHKCI	CYCGRG	2 cut(s)	2358, 2457
BsiSI	CCGG	4 cut(s)	491, 1219, 1368, 1483
BslFI	GGGAC	2 cut(s)	791, 843
BslI	CCNNNNNNNGG	4 cut(s)	59, 73, 84, 664
BsmAI	GTCTC	3 cut(s)	1567, 1881, 2113
BsmFI	GGGAC	2 cut(s)	791, 843
BsmI	GAATGC	2 cut(s)	2100, 2163
Bso31I	GGTCTC	2 cut(s)	1567, 2113
BsoBI	CYCGRG	2 cut(s)	2358, 2457
Bsp1286I	GDGCHC	4 cut(s)	9, 672, 2079, 2407
Bsp1407I	TGTACA	1 cut(s)	340
Bsp143I	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
BspACI	CCGC	8 cut(s)	67, 103, 502, 714, 1196, 1371, 1693, 2632
BspCNI	CTCAG	5 cut(s)	322, 448, 688, 922, 1309
BspDI	ATCGAT	2 cut(s)	1749, 1753
BspHI	TCATGA	2 cut(s)	142, 1407
BspLI	GGNNCC	4 cut(s)	292, 635, 1190, 2365
BspMAI	CTGCAG	5 cut(s)	75, 93, 1159, 1441, 1450
BspMI	ACCTGC	3 cut(s)	112, 580, 1732
BspPI	GGATC	3 cut(s)	628, 641, 649
BspT107I	GGYRCC	1 cut(s)	1188
BspTI	CTTAAG	4 cut(s)	581, 824, 1043, 1597
BspTNI	GGTCTC	2 cut(s)	1567, 2113
BsrDI	GCAATG	3 cut(s)	318, 873, 1950
BsrFI	RCCGGY	1 cut(s)	1482
BsrGI	TGTACA	1 cut(s)	340
BsrI	ACTGG	2 cut(s)	1417, 2433
BssAI	RCCGGY	1 cut(s)	1482
BssECI	CCNNGG	4 cut(s)	637, 1266, 1696, 2490
BssMI	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
BssNI	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
BssSI	CACGAG	1 cut(s)	1728
BssT1I	CCWWGG	3 cut(s)	1266, 1696, 2490
Bst2BI	CACGAG	1 cut(s)	1728
Bst2UI	CCWGG	3 cut(s)	118, 426, 639
Bst6I	CTCTTC	1 cut(s)	1520
BstACI	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
BstAFI	CTTAAG	4 cut(s)	581, 824, 1043, 1597
BstAPI	GCANNNNNTGC	2 cut(s)	1445, 2309
BstAUI	TGTACA	1 cut(s)	340
BstBAI	YACGTR	1 cut(s)	251
BstEII	GGTNACC	1 cut(s)	2431
BstH2I	RGCGCY	1 cut(s)	1192
BstHHI	GCGC	1 cut(s)	1191
BstKTI	GATC	7 cut(s)	82, 636, 644, 1042, 1630, 1753, 2299
BstMAI	GTCTC	3 cut(s)	1567, 1881, 2113
BstMBI	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
BstMCI	CGRYCG	2 cut(s)	82, 1753
BstNI	CCWGG	3 cut(s)	118, 426, 639
BstNSI	RCATGY	1 cut(s)	347
BstPI	GGTNACC	1 cut(s)	2431
BstSCI	CCNGG	5 cut(s)	116, 424, 489, 637, 1218
BstSFI	CTRYAG	7 cut(s)	71, 89, 224, 1155, 1437, 1446, 1452
BstSLI	GKGCMC	1 cut(s)	2079
BstX2I	RGATCY	3 cut(s)	633, 641, 1039
BstXI	CCANNNNNNTGG	1 cut(s)	1273
BstYI	RGATCY	3 cut(s)	633, 641, 1039
Bsu15I	ATCGAT	2 cut(s)	1749, 1753
Bsu36I	CCTNAGG	1 cut(s)	456
BsuI	GTATCC	2 cut(s)	991, 1754
BsuTUI	ATCGAT	2 cut(s)	1749, 1753
BtsI	GCAGTG	2 cut(s)	1542, 2405
BtsIMutI	CAGTG	5 cut(s)	24, 351, 1542, 2247, 2405
BveI	ACCTGC	3 cut(s)	112, 580, 1732
CaiI	CAGNNNCTG	4 cut(s)	755, 1445, 1793, 2570
CciI	TCATGA	2 cut(s)	142, 1407
CfoI	GCGC	1 cut(s)	1191
Cfr10I	RCCGGY	1 cut(s)	1482
Cfr13I	GGNCC	7 cut(s)	290, 1024, 1700, 2364, 2468, 2487, 2614
ClaI	ATCGAT	2 cut(s)	1749, 1753
CseI	GACGC	7 cut(s)	35, 52, 115, 122, 507, 2562, 2576
Csp6I	GTAC	3 cut(s)	203, 341, 1921
CspCI	CAANNNNNGTGG	2 cut(s)	2667, 2702
CviQI	GTAC	3 cut(s)	203, 341, 1921
DinI	GGCGCC	1 cut(s)	1190
DpnI	GATC	7 cut(s)	81, 635, 643, 1041, 1629, 1752, 2298
DpnII	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
DraI	TTTAAA	1 cut(s)	1831
DrdI	GACNNNNNNGTC	2 cut(s)	62, 1873
DriI	GACNNNNNGTC	1 cut(s)	2572
DseDI	GACNNNNNNGTC	2 cut(s)	62, 1873
EaeI	YGGCCR	1 cut(s)	1820
Eam1104I	CTCTTC	1 cut(s)	1520
Eam1105I	GACNNNNNGTC	1 cut(s)	2572
EarI	CTCTTC	1 cut(s)	1520
EciI	GGCGGA	3 cut(s)	56, 1386, 1682
Ecl136II	GAGCTC	1 cut(s)	7
Eco130I	CCWWGG	3 cut(s)	1266, 1696, 2490
Eco147I	AGGCCT	1 cut(s)	1652
Eco24I	GRGCYC	1 cut(s)	9
Eco31I	GGTCTC	2 cut(s)	1567, 2113
Eco47I	GGWCC	3 cut(s)	1024, 2364, 2614
Eco53kI	GAGCTC	1 cut(s)	7
Eco57I	CTGAAG	7 cut(s)	252, 375, 644, 1275, 1298, 1374, 1449
Eco81I	CCTNAGG	1 cut(s)	456
Eco88I	CYCGRG	2 cut(s)	2358, 2457
Eco91I	GGTNACC	1 cut(s)	2431
EcoICRI	GAGCTC	1 cut(s)	7
EcoO109I	RGGNCCY	3 cut(s)	290, 1024, 2614
EcoO65I	GGTNACC	1 cut(s)	2431
EcoRI	GAATTC	3 cut(s)	691, 1128, 2341
EcoRII	CCWGG	3 cut(s)	116, 424, 637
EcoT14I	CCWWGG	3 cut(s)	1266, 1696, 2490
EcoT22I	ATGCAT	1 cut(s)	2165
EcoT38I	GRGCYC	1 cut(s)	9
EgeI	GGCGCC	1 cut(s)	1190
EheI	GGCGCC	1 cut(s)	1190
ErhI	CCWWGG	3 cut(s)	1266, 1696, 2490
FalI	AAGNNNNNCTT	2 cut(s)	829, 861
FaqI	GGGAC	2 cut(s)	791, 843
FauNDI	CATATG	2 cut(s)	907, 1033
FriOI	GRGCYC	1 cut(s)	9
FspBI	CTAG	7 cut(s)	153, 161, 1062, 1586, 2007, 2097, 2423
GlaI	GCGC	1 cut(s)	1190
GsaI	CCCAGC	1 cut(s)	1196
GsuI	CTGGAG	1 cut(s)	1970
HaeII	RGCGCY	1 cut(s)	1192
HapII	CCGG	4 cut(s)	491, 1219, 1368, 1483
HgaI	GACGC	7 cut(s)	35, 52, 115, 122, 507, 2562, 2576
HhaI	GCGC	1 cut(s)	1191
Hin1I	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
Hin6I	GCGC	1 cut(s)	1189
HinP1I	GCGC	1 cut(s)	1189
HindIII	AAGCTT	4 cut(s)	234, 685, 991, 1142
HpaII	CCGG	4 cut(s)	491, 1219, 1368, 1483
HphI	GGTGA	5 cut(s)	41, 911, 1124, 1556, 1973
Hpy166II	GTNNAC	2 cut(s)	1744, 2077
Hpy8I	GTNNAC	2 cut(s)	1744, 2077
Hpy99I	CGWCG	3 cut(s)	59, 62, 116
HpyAV	CCTTC	5 cut(s)	862, 936, 1398, 1541, 1911
HpyCH4IV	ACGT	2 cut(s)	250, 2276
HpySE526I	ACGT	2 cut(s)	250, 2276
Hsp92I	GRCGYC	5 cut(s)	27, 63, 114, 499, 1189
HspAI	GCGC	1 cut(s)	1189
KasI	GGCGCC	1 cut(s)	1188
Kzo9I	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
LmnI	GCTCC	7 cut(s)	4, 12, 586, 1337, 1940, 2402, 2420
MaeI	CTAG	7 cut(s)	153, 161, 1062, 1586, 2007, 2097, 2423
MaeII	ACGT	2 cut(s)	250, 2276
MaeIII	GTNAC	7 cut(s)	438, 972, 1166, 1669, 2431, 2524, 2647
MalI	GATC	7 cut(s)	81, 635, 643, 1041, 1629, 1752, 2298
MboI	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
MboII	GAAGA	8 cut(s)	230, 368, 837, 872, 1049, 1442, 1507, 2081
MfeI	CAATTG	2 cut(s)	1935, 2607
MflI	RGATCY	3 cut(s)	633, 641, 1039
MhlI	GDGCHC	4 cut(s)	9, 672, 2079, 2407
MlsI	TGGCCA	1 cut(s)	1822
MluNI	TGGCCA	1 cut(s)	1822
Mly113I	GGCGCC	1 cut(s)	1189
MlyI	GAGTC	3 cut(s)	980, 1506, 1883
Mox20I	TGGCCA	1 cut(s)	1822
Mph1103I	ATGCAT	1 cut(s)	2165
MscI	TGGCCA	1 cut(s)	1822
MslI	CAYNNNNRTG	2 cut(s)	323, 2158
Msp20I	TGGCCA	1 cut(s)	1822
MspA1I	CMGCKG	5 cut(s)	103, 755, 1196, 1445, 1451
MspCI	CTTAAG	4 cut(s)	581, 824, 1043, 1597
MspI	CCGG	4 cut(s)	491, 1219, 1368, 1483
MspR9I	CCNGG	5 cut(s)	118, 426, 491, 639, 1220
MunI	CAATTG	2 cut(s)	1935, 2607
Mva1269I	GAATGC	2 cut(s)	2100, 2163
MvaI	CCWGG	3 cut(s)	118, 426, 639
NarI	GGCGCC	1 cut(s)	1189
NciI	CCSGG	2 cut(s)	491, 1220
NdeI	CATATG	2 cut(s)	907, 1033
NdeII	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
NlaIV	GGNNCC	4 cut(s)	292, 635, 1190, 2365
NmeAIII	GCCGAG	2 cut(s)	1910, 2338
NmuCI	GTSAC	3 cut(s)	972, 1166, 2524
NsiI	ATGCAT	1 cut(s)	2165
NspI	RCATGY	1 cut(s)	347
PaeR7I	CTCGAG	2 cut(s)	2358, 2457
PagI	TCATGA	2 cut(s)	142, 1407
PceI	AGGCCT	1 cut(s)	1652
PciI	ACATGT	1 cut(s)	343
PctI	GAATGC	2 cut(s)	2100, 2163
PflFI	GACNNNGTC	1 cut(s)	62
PflMI	CCANNNNNTGG	1 cut(s)	664
Ple19I	CGATCG	2 cut(s)	82, 1753
PleI	GAGTC	3 cut(s)	979, 1506, 1882
PluTI	GGCGCC	1 cut(s)	1192
PpsI	GAGTC	3 cut(s)	979, 1506, 1882
Ppu21I	YACGTR	1 cut(s)	251
PpuMI	RGGWCCY	2 cut(s)	1024, 2614
PscI	ACATGT	1 cut(s)	343
PshBI	ATTAAT	1 cut(s)	573
Psp124BI	GAGCTC	1 cut(s)	9
Psp1406I	AACGTT	1 cut(s)	2276
Psp5II	RGGWCCY	2 cut(s)	1024, 2614
Psp6I	CCWGG	3 cut(s)	116, 424, 637
PspEI	GGTNACC	1 cut(s)	2431
PspFI	CCCAGC	1 cut(s)	1192
PspGI	CCWGG	3 cut(s)	116, 424, 637
PspN4I	GGNNCC	4 cut(s)	292, 635, 1190, 2365
PspPI	GGNCC	7 cut(s)	290, 1024, 1700, 2364, 2468, 2487, 2614
PspPPI	RGGWCCY	2 cut(s)	1024, 2614
PspXI	VCTCGAGB	1 cut(s)	2358
PstI	CTGCAG	5 cut(s)	75, 93, 1159, 1441, 1450
PstNI	CAGNNNCTG	4 cut(s)	755, 1445, 1793, 2570
PsuI	RGATCY	3 cut(s)	633, 641, 1039
PsyI	GACNNNGTC	1 cut(s)	62
PvuI	CGATCG	2 cut(s)	82, 1753
PvuII	CAGCTG	3 cut(s)	755, 1445, 1451
RsaI	GTAC	3 cut(s)	204, 342, 1922
RsaNI	GTAC	3 cut(s)	203, 341, 1921
RseI	CAYNNNNRTG	2 cut(s)	323, 2158
SacI	GAGCTC	1 cut(s)	9
Sau3AI	GATC	7 cut(s)	79, 633, 641, 1039, 1627, 1750, 2296
Sau96I	GGNCC	7 cut(s)	290, 1024, 1700, 2364, 2468, 2487, 2614
SbfI	CCTGCAGG	1 cut(s)	75
SchI	GAGTC	3 cut(s)	980, 1506, 1883
ScrFI	CCNGG	5 cut(s)	118, 426, 491, 639, 1220
SdaI	CCTGCAGG	1 cut(s)	75
SduI	GDGCHC	4 cut(s)	9, 672, 2079, 2407
SfcI	CTRYAG	7 cut(s)	71, 89, 224, 1155, 1437, 1446, 1452
SfoI	GGCGCC	1 cut(s)	1190
Sfr274I	CTCGAG	2 cut(s)	2358, 2457
SinI	GGWCC	3 cut(s)	1024, 2364, 2614
SlaI	CTCGAG	2 cut(s)	2358, 2457
SmiMI	CAYNNNNRTG	2 cut(s)	323, 2158
Sse8387I	CCTGCAGG	1 cut(s)	75
SseBI	AGGCCT	1 cut(s)	1652
SsiI	CCGC	8 cut(s)	67, 103, 502, 714, 1196, 1371, 1693, 2632
SspDI	GGCGCC	1 cut(s)	1188
SspI	AATATT	4 cut(s)	174, 571, 2016, 2271
SspMI	CTAG	7 cut(s)	153, 161, 1062, 1586, 2007, 2097, 2423
SstI	GAGCTC	1 cut(s)	9
StuI	AGGCCT	1 cut(s)	1652
StyD4I	CCNGG	5 cut(s)	116, 424, 489, 637, 1218
StyI	CCWWGG	3 cut(s)	1266, 1696, 2490
TaiI	ACGT	2 cut(s)	253, 2279
TaqI	TCGA	7 cut(s)	111, 619, 1749, 1753, 2359, 2458, 2543
TatI	WGTACW	1 cut(s)	340
TauI	GCSGC	3 cut(s)	504, 716, 2634
TscAI	CASTG	5 cut(s)	24, 358, 1542, 2247, 2412
TseFI	GTSAC	3 cut(s)	972, 1166, 2524
Tsp45I	GTSAC	3 cut(s)	972, 1166, 2524
TspDTI	ATGAA	8 cut(s)	131, 416, 833, 894, 1020, 1050, 1154, 1940
TspGWI	ACGGA	1 cut(s)	2666
TspRI	CASTG	5 cut(s)	24, 358, 1542, 2247, 2412
Tth111I	GACNNNGTC	1 cut(s)	62
Van91I	CCANNNNNTGG	1 cut(s)	664
Vha464I	CTTAAG	4 cut(s)	581, 824, 1043, 1597
VneI	GTGCAC	1 cut(s)	2075
VpaK11BI	GGWCC	3 cut(s)	1024, 2364, 2614
VspI	ATTAAT	1 cut(s)	573
XapI	RAATTY	7 cut(s)	278, 403, 691, 1128, 1928, 2108, 2341
XbaI	TCTAGA	1 cut(s)	160
XceI	RCATGY	1 cut(s)	347
XhoI	CTCGAG	2 cut(s)	2358, 2457
XspI	CTAG	7 cut(s)	153, 161, 1062, 1586, 2007, 2097, 2423
Zsp2I	ATGCAT	1 cut(s)	2165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.