pycom15g02630

COP9 signalosome complex subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
1620725 .. 1624122
3398 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g02630.6

Sequence Viewer

Length: 1188 bp
ATGGAGAGTGCCTTCGCGAGCGCCTCTGCGATCTCCGACCAGCGGCAGAAGATCGAGCAGTACAAGCACATTCTCTCCACCGTGATTTCTTCAAGCGACGTCGTTCAGGCCAAGAAGTTCATCGATCACTTGTTGTCGGATGATGTTCCGTTGGTGGTTTCCCGGCAGCTTTTGCAGATTTTTGCCCAGGAGTTGGGGCGGTGGGAGCCGGAGACCCAGAAGGAGATTGCCCACTATGCCCTTTCTCAGATTCGTGTCGTTTCATTCGAAGAACAGGTGATGATAATAAGAGAGAAACTTGCGGAATTGTACGAGTCTGAGCAACAATGGTCAAAAGCAGCTCAGATGCTCAGTGGAATTAATCTCGACTCAGGAACGAGAGCCGTTGATGACACATTCAAGTTATCAAAATGTGTCCAAATTGCTCGCCTATATCTCGAGGACGATGATGCCGTGAATGCAGAAGCTTTTATTCATAAGGCTTCATTCTTGATTACAACTATTCAGCATGAAGTTTTGACTTTAGAGTACAAGATTTGTTATGCAAGGATTTTAGATTTAAAGAGAAGGTTCTTGGAAGCAGCATTACGTTATTATGATTTTTCTCAGATTGAAAAGAGGCAAATCGGATCGATCAAGATTGATGAGGAAGCACTGGAGCAAGCTCTATCTGCTGCAGTTACATGTACAATTTTAGCCGCAGCAGGACCCCAACGTTCTCGTGTTCTTGCTACTTTGTACAAAGATGAGCGATGCTCAAAGTTAAAAATATATCCAATACTACAAAAGGTATATTTGGAGAGAATTTTGAGGAAACCCGAAATTGAGGCATTTGCTGAAGAGTTAAAGCCACATCAGAAAGCACTTCTTCCAGACAACTTTACAGTATTAGATCGTGCAATGATTGAACATAATCTTCTGAGTGCCAGCAAACTTTACACCAATATAAGTTTTGAAGAATTGGGCACTTTGCTGGGAATTGAGCCTCATAAGGCCGAGAAGATTGCATCAAAAATGATATATGAGGACAGAATGAGGGGATCTATTGATCAGGTGGAAGCTGTCATACATTTTCAGGATGACTCTGAAGAGCTGCAACAGTGGGATCAGCAGATTGTTGGCCTGTGTCAGGCTCTCAATGAGGTCTTGGATAGCATGGCAAAGAAGGGCATGGCAATTCCCGTCTGA

Protein Analysis

396

Amino Acids

45.07

Weight (kDa)

5.32

Isoelectric Point (pI)

48.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 102
AccB7I CCANNNNNTGG 1 cut(s) 193
AccII CGCG 1 cut(s) 17
AciI CCGC 4 cut(s) 43, 199, 302, 699
AclI AACGTT 1 cut(s) 715
AclWI GGATC 3 cut(s) 637, 1048, 1113
AcsI RAATTY 1 cut(s) 804
AcuI CTGAAG 2 cut(s) 858, 1107
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 5 cut(s) 62, 311, 530, 688, 740
AfiI CCNNNNNNNGG 3 cut(s) 42, 193, 1129
AflIII ACRYGT 1 cut(s) 683
AgsI TTSAA 5 cut(s) 93, 400, 614, 908, 956
AjnI CCWGG 1 cut(s) 186
AluBI AGCT 6 cut(s) 169, 341, 467, 665, 1061, 1093
AluI AGCT 6 cut(s) 169, 341, 467, 665, 1061, 1093
Alw26I GTCTC 1 cut(s) 206
AlwI GGATC 3 cut(s) 637, 1048, 1113
Ama87I CYCGRG 1 cut(s) 437
AoxI GGCC 3 cut(s) 108, 993, 1120
ApeKI GCWGC 6 cut(s) 166, 338, 581, 674, 701, 1093
ApoI RAATTY 1 cut(s) 804
AseI ATTAAT 1 cut(s) 360
AspLEI GCGC 1 cut(s) 23
AspS9I GGNCC 1 cut(s) 707
AsuC2I CCSGG 1 cut(s) 163
AsuHPI GGTGA 1 cut(s) 289
AsuII TTCGAA 1 cut(s) 267
AvaI CYCGRG 1 cut(s) 437
AvaII GGWCC 1 cut(s) 707
BaeGI GKGCMC 1 cut(s) 968
BarI GAAGNNNNNNTAC 4 cut(s) 570, 602, 1050, 1082
BauI CACGAG 1 cut(s) 720
BbvI GCAGC 6 cut(s) 178, 350, 593, 661, 713, 1080
BceAI ACGGC 2 cut(s) 368, 437
BcgI CGANNNNNNTGC 2 cut(s) 986, 1020
BciT130I CCWGG 1 cut(s) 188
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 206
BfmI CTRYAG 1 cut(s) 675
BfoI RGCGCY 1 cut(s) 24
BisI GCNGC 8 cut(s) 44, 167, 339, 582, 675, 699, 702, 1094
BlsI GCNGC 8 cut(s) 45, 168, 340, 583, 676, 700, 703, 1095
Bme1390I CCNGG 2 cut(s) 163, 188
Bme18I GGWCC 1 cut(s) 707
BmeT110I CYCGRG 1 cut(s) 437
BmgT120I GGNCC 1 cut(s) 707
BmiI GGNNCC 2 cut(s) 207, 709
BmrFI CCNGG 2 cut(s) 163, 188
BmsI GCATC 4 cut(s) 336, 439, 743, 1016
BplI GAGNNNNNCTC 2 cut(s) 740, 772
BpmI CTGGAG 1 cut(s) 677
Bpu14I TTCGAA 1 cut(s) 267
BpuMI CCSGG 1 cut(s) 163
Bsa29I ATCGAT 2 cut(s) 123, 632
BsaHI GRCGYC 1 cut(s) 99
BsaI GGTCTC 1 cut(s) 206
BsaJI CCNNGG 1 cut(s) 186
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 3 cut(s) 42, 193, 1129
Bse1I ACTGG 1 cut(s) 660
Bse3DI GCAATG 1 cut(s) 906
BseBI CCWGG 1 cut(s) 188
BseCI ATCGAT 2 cut(s) 123, 632
BseDI CCNNGG 1 cut(s) 186
BseGI GGATG 2 cut(s) 145, 1084
BseLI CCNNNNNNNGG 3 cut(s) 42, 193, 1129
BseMI GCAATG 1 cut(s) 906
BseMII CTCAG 7 cut(s) 260, 309, 356, 364, 384, 620, 911
BseNI ACTGG 1 cut(s) 660
BseSI GKGCMC 1 cut(s) 968
BseXI GCAGC 6 cut(s) 178, 350, 593, 661, 713, 1080
BseYI CCCAGC 1 cut(s) 973
Bsh1236I CGCG 1 cut(s) 17
BshFI GGCC 3 cut(s) 110, 995, 1122
BshVI ATCGAT 2 cut(s) 123, 632
BsiHKCI CYCGRG 1 cut(s) 437
BsiSI CCGG 2 cut(s) 163, 209
BslI CCNNNNNNNGG 3 cut(s) 42, 193, 1129
BsmAI GTCTC 1 cut(s) 206
BsmI GAATGC 1 cut(s) 463
BsnI GGCC 3 cut(s) 110, 995, 1122
Bso31I GGTCTC 1 cut(s) 206
BsoBI CYCGRG 1 cut(s) 437
Bsp119I TTCGAA 1 cut(s) 267
Bsp1286I GDGCHC 1 cut(s) 968
Bsp1407I TGTACA 2 cut(s) 686, 738
Bsp143I GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
Bsp68I TCGCGA 1 cut(s) 17
BspACI CCGC 4 cut(s) 43, 199, 302, 699
BspANI GGCC 3 cut(s) 110, 995, 1122
BspCNI CTCAG 7 cut(s) 259, 310, 355, 363, 383, 619, 912
BspDI ATCGAT 2 cut(s) 123, 632
BspFNI CGCG 1 cut(s) 17
BspLI GGNNCC 2 cut(s) 207, 709
BspMAI CTGCAG 1 cut(s) 679
BspPI GGATC 3 cut(s) 637, 1048, 1113
BspQI GCTCTTC 1 cut(s) 1083
BspT104I TTCGAA 1 cut(s) 267
BspTNI GGTCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 906
BsrGI TGTACA 2 cut(s) 686, 738
BsrI ACTGG 1 cut(s) 660
BssECI CCNNGG 1 cut(s) 186
BssMI GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 1 cut(s) 720
Bst2BI CACGAG 1 cut(s) 720
Bst2UI CCWGG 1 cut(s) 188
Bst4CI ACNGT 3 cut(s) 82, 886, 1101
Bst6I CTCTTC 2 cut(s) 834, 1083
BstACI GRCGYC 1 cut(s) 99
BstAPI GCANNNNNTGC 1 cut(s) 172
BstAUI TGTACA 2 cut(s) 686, 738
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 4 cut(s) 19, 427, 663, 928
BstDEI CTNAG 7 cut(s) 246, 318, 342, 350, 370, 606, 920
BstENI CCTNNNNNAGG 1 cut(s) 1127
BstF5I GGATG 2 cut(s) 145, 1084
BstFNI CGCG 1 cut(s) 17
BstH2I RGCGCY 1 cut(s) 24
BstHHI GCGC 1 cut(s) 23
BstKTI GATC 9 cut(s) 33, 54, 127, 632, 636, 895, 1043, 1051, 1108
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
BstMWI GCNNNNNNNGC 6 cut(s) 64, 172, 205, 236, 458, 671
BstNI CCWGG 1 cut(s) 188
BstNSI RCATGY 1 cut(s) 687
BstSCI CCNGG 2 cut(s) 161, 186
BstSFI CTRYAG 1 cut(s) 675
BstSLI GKGCMC 1 cut(s) 968
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 6 cut(s) 178, 350, 593, 661, 713, 1080
BstX2I RGATCY 1 cut(s) 1040
BstYI RGATCY 1 cut(s) 1040
Bsu15I ATCGAT 2 cut(s) 123, 632
BsuRI GGCC 3 cut(s) 110, 995, 1122
BsuTUI ATCGAT 2 cut(s) 123, 632
BtgZI GCGATG 1 cut(s) 766
BtsCI GGATG 2 cut(s) 145, 1084
BtsIMutI CAGTG 3 cut(s) 358, 653, 1106
BtuMI TCGCGA 1 cut(s) 17
Cac8I GCNNGC 4 cut(s) 19, 427, 663, 928
CfoI GCGC 1 cut(s) 23
Cfr13I GGNCC 1 cut(s) 707
ClaI ATCGAT 2 cut(s) 123, 632
Csp6I GTAC 5 cut(s) 61, 310, 529, 687, 739
CviAII CATG 4 cut(s) 509, 684, 1156, 1171
CviQI GTAC 5 cut(s) 61, 310, 529, 687, 739
DdeI CTNAG 7 cut(s) 246, 318, 342, 350, 370, 606, 920
DpnI GATC 9 cut(s) 32, 53, 126, 631, 635, 894, 1042, 1050, 1107
DpnII GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
DraI TTTAAA 1 cut(s) 561
Eam1104I CTCTTC 2 cut(s) 834, 1083
EarI CTCTTC 2 cut(s) 834, 1083
Eco31I GGTCTC 1 cut(s) 206
Eco47I GGWCC 1 cut(s) 707
Eco57I CTGAAG 2 cut(s) 858, 1107
Eco88I CYCGRG 1 cut(s) 437
EcoNI CCTNNNNNAGG 1 cut(s) 1127
EcoO109I RGGNCCY 1 cut(s) 707
EcoRII CCWGG 1 cut(s) 186
FaeI CATG 4 cut(s) 512, 687, 1159, 1174
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FatI CATG 4 cut(s) 508, 683, 1155, 1170
FbaI TGATCA 1 cut(s) 1048
Fnu4HI GCNGC 8 cut(s) 44, 167, 339, 582, 675, 699, 702, 1094
FokI GGATG 2 cut(s) 152, 1091
Fsp4HI GCNGC 8 cut(s) 44, 167, 339, 582, 675, 699, 702, 1094
GlaI GCGC 1 cut(s) 22
GluI GCNGC 8 cut(s) 44, 167, 339, 582, 675, 699, 702, 1094
GsaI CCCAGC 1 cut(s) 977
GsuI CTGGAG 1 cut(s) 677
HaeII RGCGCY 1 cut(s) 24
HaeIII GGCC 3 cut(s) 110, 995, 1122
HapII CCGG 2 cut(s) 163, 209
HhaI GCGC 1 cut(s) 23
Hin1I GRCGYC 1 cut(s) 99
Hin1II CATG 4 cut(s) 512, 687, 1159, 1174
Hin6I GCGC 1 cut(s) 21
HinP1I GCGC 1 cut(s) 21
HindIII AAGCTT 1 cut(s) 465
HinfI GANTC 4 cut(s) 250, 314, 368, 1082
HpaII CCGG 2 cut(s) 163, 209
HphI GGTGA 1 cut(s) 289
Hpy188III TCNNGA 8 cut(s) 16, 365, 372, 437, 490, 637, 872, 1076
Hpy99I CGWCG 2 cut(s) 101, 104
HpyAV CCTTC 4 cut(s) 22, 214, 561, 1159
HpyCH4III ACNGT 3 cut(s) 82, 886, 1101
HpyCH4IV ACGT 3 cut(s) 99, 589, 715
HpyCH4V TGCA 7 cut(s) 175, 461, 545, 677, 899, 1007, 1096
HpyF10VI GCNNNNNNNGC 6 cut(s) 64, 172, 205, 236, 458, 671
HpyF3I CTNAG 7 cut(s) 246, 318, 342, 350, 370, 606, 920
HpySE526I ACGT 3 cut(s) 99, 589, 715
Hsp92I GRCGYC 1 cut(s) 99
Hsp92II CATG 4 cut(s) 512, 687, 1159, 1174
HspAI GCGC 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
LguI GCTCTTC 1 cut(s) 1083
LmnI GCTCC 2 cut(s) 205, 658
Lsp1109I GCAGC 6 cut(s) 178, 350, 593, 661, 713, 1080
LweI GCATC 4 cut(s) 336, 439, 743, 1016
MaeII ACGT 3 cut(s) 99, 589, 715
MaeIII GTNAC 1 cut(s) 679
MalI GATC 9 cut(s) 32, 53, 126, 631, 635, 894, 1042, 1050, 1107
MboI GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
MboII GAAGA 9 cut(s) 61, 81, 281, 851, 860, 908, 968, 1012, 1100
MflI RGATCY 1 cut(s) 1040
MhlI GDGCHC 1 cut(s) 968
MluCI AATT 9 cut(s) 305, 357, 420, 690, 804, 822, 959, 978, 1176
MlyI GAGTC 3 cut(s) 323, 362, 1076
MmeI TCCRAC 2 cut(s) 60, 117
MseI TTAA 4 cut(s) 360, 560, 764, 845
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 2 cut(s) 163, 209
MspR9I CCNGG 2 cut(s) 163, 188
Mva1269I GAATGC 1 cut(s) 463
MvaI CCWGG 1 cut(s) 188
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 6 cut(s) 64, 172, 205, 236, 458, 671
NciI CCSGG 1 cut(s) 163
NdeII GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
NlaIII CATG 4 cut(s) 512, 687, 1159, 1174
NlaIV GGNNCC 2 cut(s) 207, 709
NmeAIII GCCGAG 1 cut(s) 1021
NruI TCGCGA 1 cut(s) 17
NspI RCATGY 1 cut(s) 687
NspV TTCGAA 1 cut(s) 267
PaeR7I CTCGAG 1 cut(s) 437
PciI ACATGT 1 cut(s) 683
PciSI GCTCTTC 1 cut(s) 1083
PcsI WCGNNNNNNNCGW 2 cut(s) 264, 450
PctI GAATGC 1 cut(s) 463
PfeI GAWTC 1 cut(s) 250
PflMI CCANNNNNTGG 1 cut(s) 193
PkrI GCNGC 8 cut(s) 45, 168, 340, 583, 676, 700, 703, 1095
PleI GAGTC 3 cut(s) 322, 362, 1076
PpsI GAGTC 3 cut(s) 322, 362, 1076
PpuMI RGGWCCY 1 cut(s) 707
PscI ACATGT 1 cut(s) 683
PshBI ATTAAT 1 cut(s) 360
Psp1406I AACGTT 1 cut(s) 715
Psp5II RGGWCCY 1 cut(s) 707
Psp6I CCWGG 1 cut(s) 186
PspFI CCCAGC 1 cut(s) 973
PspGI CCWGG 1 cut(s) 186
PspN4I GGNNCC 2 cut(s) 207, 709
PspPI GGNCC 1 cut(s) 707
PspPPI RGGWCCY 1 cut(s) 707
PstI CTGCAG 1 cut(s) 679
PsuI RGATCY 1 cut(s) 1040
RruI TCGCGA 1 cut(s) 17
RsaI GTAC 5 cut(s) 62, 311, 530, 688, 740
RsaNI GTAC 5 cut(s) 61, 310, 529, 687, 739
SapI GCTCTTC 1 cut(s) 1083
SaqAI TTAA 4 cut(s) 360, 560, 764, 845
SatI GCNGC 8 cut(s) 44, 167, 339, 582, 675, 699, 702, 1094
Sau3AI GATC 9 cut(s) 30, 51, 124, 629, 633, 892, 1040, 1048, 1105
Sau96I GGNCC 1 cut(s) 707
SchI GAGTC 3 cut(s) 323, 362, 1076
ScrFI CCNGG 2 cut(s) 163, 188
SduI GDGCHC 1 cut(s) 968
SfaNI GCATC 4 cut(s) 336, 439, 743, 1016
SfcI CTRYAG 1 cut(s) 675
Sfr274I CTCGAG 1 cut(s) 437
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 1 cut(s) 707
SlaI CTCGAG 1 cut(s) 437
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
Sse9I AATT 9 cut(s) 305, 357, 420, 690, 804, 822, 959, 978, 1176
SsiI CCGC 4 cut(s) 43, 199, 302, 699
StyD4I CCNGG 2 cut(s) 161, 186
TaaI ACNGT 3 cut(s) 82, 886, 1101
TaiI ACGT 3 cut(s) 102, 592, 718
TaqI TCGA 6 cut(s) 54, 123, 267, 366, 438, 632
TasI AATT 9 cut(s) 305, 357, 420, 690, 804, 822, 959, 978, 1176
TatI WGTACW 4 cut(s) 60, 528, 686, 738
TauI GCSGC 2 cut(s) 46, 701
TfiI GAWTC 1 cut(s) 250
Tru1I TTAA 4 cut(s) 360, 560, 764, 845
Tru9I TTAA 4 cut(s) 360, 560, 764, 845
TscAI CASTG 3 cut(s) 358, 660, 1106
TseI GCWGC 6 cut(s) 166, 338, 581, 674, 701, 1093
TspDTI ATGAA 5 cut(s) 109, 252, 464, 474, 525
TspGWI ACGGA 1 cut(s) 138
TspRI CASTG 3 cut(s) 358, 660, 1106
Van91I CCANNNNNTGG 1 cut(s) 193
VpaK11BI GGWCC 1 cut(s) 707
VspI ATTAAT 1 cut(s) 360
XagI CCTNNNNNAGG 1 cut(s) 1127
XapI RAATTY 1 cut(s) 804
XceI RCATGY 1 cut(s) 687
XhoI CTCGAG 1 cut(s) 437
ZraI GACGTC 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.