pycom15g05750

Far upstream element-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0009579
Physical Location & Seq
Forward (+)
3481117 .. 3489479
8363 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2778 bp
ATGGCTCTGCTGACCCGAGCCCGCATCCCTCTCCAGCTCTCGGCCCAGCGGGCCCTCTCTCTCCACACCACCGTCCCCTCCCTCTCGTCCTCCGCCCCCTCCGGCTCCACTCCGGCCACCTATGCCCGTCCTCCTCCCCCTTCCGCCTCCCCGCCCCCGCCGGGCCTCTCCAAGGCCGCCGAGTTCGTGATCGCGAAGGTCCACGATCTCATGAACTGGGCCCGCCGCGGCTCCATCTGGCCCATGACCTTCGGCCTCGCCTGCTGCGCCGTCGAGATGATGCACACCGGAGCCGCCCGCTACGATTTGGACCGATTCGGCATCATCTTCCGGCCCAGCCCTCGCCAGTCCGATTGCAAGATGATCGTCGCCGGCACTCTCACCAACAAGATGGCCCCTGCTCTCCGCAAGGTCTATGACCAAATGCCTGAGCCGAGATGGGTCATCTCCATGGGAAGCTGTGCAAATGGGGGTGGTTACTATCATTACTCCTATTCCGTAGTTAGGGGTTGTGACAGGATCGTCCCCGTTGATATCTATGTTCCAGGCTGCCCTCCCACTGCTGAGGCCCTACTTTACGGCCTTCTCCAGCTACAGAAGAAGATCAACCGGCGCAAGGATTTCCTTCTTTGGTGGACCAAATCCCACTGGTGTTTTTCCACCTCACTCTCCTCTCTCCCCCATCTCTCTCTATCTTCTAGGGTTTCTTCCTCTACAGCTACGACAATGGCCGACGAAGCCCAATACTCATCCGGTCCAGATTCAGGGAACAAGCGGAAGTACGAGGAGCAAACGCCGCCGTCCACCCGCAGAGTCACCGGCTTCTCGGCCCCCATCAAGTCGTCGTCCCCCGACTCTGCGCCGACGTCGTACAGCAGCGTTCCTCCGCCCATGGAAGATTTCCAGCTGGCCAAGCAGAAGGCGCAGGAGATCGCGGCGCGGTTGTTGAACGGCGGGGATGCTAAGCGCTCTAGGGTTGACAATGGTGGCTCCGATTCTATTGACAAGGGCCTTAGCTCTGGTCCGCCAGATTTGAAGCCTCACTTCTCAAACCCAGCTCCTTCTTCAATCCCGGTATCTTACGGTGGTTTCCAGGGATCGAGCAAAAAGATTGAGGTTCCCAATGGCAGGGTTGGTGTCATTATTGGTAAAGGTGGGGAGACTATCAAGTATCTACAGACTCAGTCGGGAGCCAAGATTCAAGTTACCCGAGATTCTGATGCGGACCTCAATTTTCCGACTAGGATGGTGGAGCTCATGGGTACTCCGGAGCAGATCGCAAAGGCTGAGCACTTGATCAATGAAGTTCTTGCTGAGGCTGAATCAGGAGGTCCTGCCATAGCTTCTAGAAGGTTAACAGTGCAAGCTGGCGGTGAACAATATGTTACAAAAATTCCTAACAACAAGGTTGGGCTTGTAATTGGTAAAGGAGGTGAAACAATAAAAAGTATGCAAGCTAGGACTGGAGCTCGTATCCAGGTTATTCCCTTGCATCTGCCACCTGGTGACACATCAACAGAAAGGACGCTACAGATTGACGGGACTACTGAACAAATTGAAGCTGCAAAACAGTTGGTAGCTGAAGTTATTAGTGAGGTAGGAACCGTGTTAGAAATCCAGCAATGTCTGGAGGATACTCTCAGCAAGGTTATCAAGCACGGCCTCCCTCAGGATGGGCTCCTTCTGGCCCCCCAATGCAACCACCTAGTTATGGCTACGGGCAGTCTGGATCGTATTCTGGCCCTCCACAGCAGTATAATGCATCCCAGCCTTCTTACCCTGGCTATCCTCCTCAACCAACATCTGGTGGATATCCATCCAGTTGGGACCAGTCAGCTGCTGCACCAACTCAGCAGACTTCCCAAGGTGGTGGTTATGATTACTATGGTCAGCAACAACCTTCACATCAACAGCAAAATCCTGGTGGTCCCGCTGCTCCTGCTGATAGTGCTGGTTACAATTATGGCCCGCCGCCAGTTTCAGGCTATAATCAACAAGGACAAGGCTACGCTCAAGATGGCTATGGTGGATATCATGCACCACCTCAATCTGGGTACGGTCAGCCACCAGCATATCGATCAACAGCAGGGTTATTCTGCAGCGGGCTATGGTAATGTGAGTAACCCACCTCAAGATGGGCACACTCCCTCTTACGGAACTCAGGGTGATTCAGCTCAAGCACCTCCTGCCCAGCAAGGATACAATGTCGGTCAACAGCCTAGCCCTAACCCTGCTGGTTACCCACCCCAAGGGTCTACTCAGCCAGGTTATGGAGCACCCCCAACTTCTCAAACTGGTTATGGAAGCCAACCACCGGCTCAGCCTGCATATGGAGCTGGATATGGAGCACCTCCAGCACAAAAGCCTCCTGCAAATCCTGCAGTTTATGGGCAAACCGCTCAGTCACCCAGCACTCCAGGAGGCTATGGTCAGCCAGCACCTGTGCAGCCAGGATACCCGCATTCTCAGCCTCCAGCTTCTGCATATGCTCAGCCAGATCCTGCTACCCGTCCCCCAACATCTGGCTATGGTGCTGCAGCACCACAAACCGGGTACGGGCCCCCATCCTATGGTGCACCACCAGCTGGCCAGCCAGGTTATGGGCAGGCGCCACCACCCTATAACGCATCGTATGGTGCTGGATATGCACAACCTCCTCCCTACTCTGCTGATGCCAGCGCAAATGGGAACACCCGCGGGACCTATGATGCTCCACCACCTGCTTCACAGACTGCTCCCCCAAGCGGCGGAGTTGCCAAAACTTCCCCTCAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001505 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003730 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010468 GO:0010494 GO:0010556 GO:0010558 GO:0010586 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010984 GO:0010985 GO:0010988 GO:0010989 GO:0016070 GO:0016071 GO:0017091 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030425 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0034660 GO:0035770 GO:0035925 GO:0036464 GO:0036477 GO:0042221 GO:0042995 GO:0043005 GO:0043025 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043487 GO:0043488 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044297 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045019 GO:0045428 GO:0045935 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050779 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061013 GO:0061014 GO:0061157 GO:0061158 GO:0065007 GO:0065008 GO:0070013 GO:0070887 GO:0071310 GO:0071345 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097447 GO:0097458 GO:0120025 GO:0120038 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903311 GO:1903313 GO:1903426 GO:1903427 GO:1904406 GO:1990904 GO:2000112 GO:2000113 GO:2000377 GO:2000378 GO:2000628
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_1

Protein Analysis

926

Amino Acids

97.77

Weight (kDa)

9.09

Isoelectric Point (pI)

54.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Oxidored_q6 PF01058 88 - 198 5.1e-25 NADH ubiquinone oxidoreductase, 20 Kd subunit
KH_1 PF00013 369 - 435 8.1e-18 KH domain
KH_1 PF00013 464 - 527 5.2e-19 KH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2728
AasI GACNNNNNNGTC 1 cut(s) 521
AatII GACGTC 1 cut(s) 869
Acc36I ACCTGC 1 cut(s) 2728
AccB1I GGYRCC 1 cut(s) 2608
AccB7I CCANNNNNTGG 6 cut(s) 1804, 2270, 2522, 2570, 2585, 2600
AccBSI CCGCTC 1 cut(s) 2399
AccI GTMKAC 1 cut(s) 2255
AccII CGCG 5 cut(s) 194, 228, 935, 940, 2697
AccIII TCCGGA 1 cut(s) 1267
AclWI GGATC 4 cut(s) 527, 1105, 1737, 2492
AcoI YGGCCR 4 cut(s) 114, 729, 909, 2587
AcsI RAATTY 1 cut(s) 1392
AcuI CTGAAG 1 cut(s) 1602
AcyI GRCGYC 2 cut(s) 866, 2609
AdeI CACNNNGTG 1 cut(s) 1505
AfaI GTAC 5 cut(s) 782, 872, 1264, 2056, 2555
AfeI AGCGCT 1 cut(s) 968
AgsI TTSAA 5 cut(s) 949, 1036, 1068, 1202, 1559
Alw21I GWGCWC 6 cut(s) 1257, 1293, 1471, 2278, 2350, 2578
Alw26I GTCTC 1 cut(s) 1154
Alw44I GTGCAC 1 cut(s) 2574
AlwI GGATC 4 cut(s) 527, 1105, 1737, 2492
AlwNI CAGNNNCTG 4 cut(s) 1840, 2441, 2480, 2501
Ama87I CYCGRG 2 cut(s) 15, 1209
Aor13HI TCCGGA 1 cut(s) 1267
Aor51HI AGCGCT 1 cut(s) 968
ApaI GGGCCC 3 cut(s) 55, 223, 2562
ApaLI GTGCAC 1 cut(s) 2574
ApoI RAATTY 1 cut(s) 1392
AspLEI GCGC 8 cut(s) 269, 615, 862, 925, 940, 969, 2611, 2681
AsuC2I CCSGG 3 cut(s) 162, 1073, 2551
AsuHPI GGTGA 7 cut(s) 373, 808, 1385, 1445, 1517, 2177, 2397
AvaI CYCGRG 2 cut(s) 15, 1209
AxyI CCTNAGG 1 cut(s) 1668
BaeGI GKGCMC 5 cut(s) 55, 223, 2142, 2562, 2578
BalI TGGCCA 2 cut(s) 911, 2589
BanI GGYRCC 1 cut(s) 2608
BanII GRGCYC 7 cut(s) 22, 55, 223, 1257, 1471, 1680, 2562
Bbv12I GWGCWC 6 cut(s) 1257, 1293, 1471, 2278, 2350, 2578
BbvCI CCTCAGC 2 cut(s) 564, 1314
BceAI ACGGC 5 cut(s) 254, 595, 784, 967, 1675
BcgI CGANNNNNNTGC 2 cut(s) 346, 380
BciVI GTATCC 4 cut(s) 1484, 1627, 2192, 2447
BclI TGATCA 1 cut(s) 1296
BcnI CCSGG 3 cut(s) 162, 1073, 2551
BcoDI GTCTC 1 cut(s) 1154
BfaI CTAG 7 cut(s) 699, 972, 1242, 1347, 1458, 1706, 2220
BfmI CTRYAG 7 cut(s) 593, 714, 1175, 1529, 2097, 2379, 2535
BfoI RGCGCY 2 cut(s) 970, 2612
BfuAI ACCTGC 1 cut(s) 2728
BfuI GTATCC 4 cut(s) 1484, 1627, 2192, 2447
BglI GCCNNNNNGGC 1 cut(s) 50
BlpI GCTNAGC 4 cut(s) 963, 1287, 2319, 2490
BmeT110I CYCGRG 2 cut(s) 15, 1209
BmrI ACTGGG 1 cut(s) 226
BmuI ACTGGG 1 cut(s) 226
BpmI CTGGAG 7 cut(s) 17, 572, 1485, 1649, 2337, 2400, 2457
Bpu10I CCTNAGC 4 cut(s) 429, 564, 1013, 1314
Bpu1102I GCTNAGC 4 cut(s) 963, 1287, 2319, 2490
BpuEI CTTGAG 3 cut(s) 1997, 2115, 2160
BpuMI CCSGG 3 cut(s) 162, 1073, 2551
Bsa29I ATCGAT 1 cut(s) 2076
BsaBI GATNNNNATC 1 cut(s) 1815
BsaHI GRCGYC 2 cut(s) 866, 2609
BsaJI CCNNGG 9 cut(s) 171, 226, 450, 891, 1093, 1779, 1863, 2248, 2695
BsaWI WCCGGW 3 cut(s) 287, 752, 1267
Bse118I RCCGGY 4 cut(s) 371, 609, 818, 2314
Bse1I ACTGG 8 cut(s) 221, 346, 653, 1468, 1820, 1830, 1975, 2299
Bse21I CCTNAGG 1 cut(s) 1668
Bse3DI GCAATG 1 cut(s) 1628
Bse8I GATNNNNATC 1 cut(s) 1815
BseAI TCCGGA 1 cut(s) 1267
BseCI ATCGAT 1 cut(s) 2076
BseDI CCNNGG 9 cut(s) 171, 226, 450, 891, 1093, 1779, 1863, 2248, 2695
BseGI GGATG 8 cut(s) 24, 749, 964, 1251, 1678, 1762, 1816, 2564
BseJI GATNNNNATC 1 cut(s) 1815
BseMI GCAATG 1 cut(s) 1628
BseNI ACTGG 8 cut(s) 221, 346, 653, 1468, 1820, 1830, 1975, 2299
BseRI GAGGAG 5 cut(s) 123, 661, 800, 1781, 2646
BseSI GKGCMC 5 cut(s) 55, 223, 2142, 2562, 2578
BseYI CCCAGC 6 cut(s) 45, 335, 1054, 1766, 2190, 2408
BsgI GTGCAG 2 cut(s) 1826, 2465
Bsh1236I CGCG 5 cut(s) 194, 228, 935, 940, 2697
BshNI GGYRCC 1 cut(s) 2608
BshVI ATCGAT 1 cut(s) 2076
BsiHKAI GWGCWC 6 cut(s) 1257, 1293, 1471, 2278, 2350, 2578
BsiHKCI CYCGRG 2 cut(s) 15, 1209
BslFI GGGAC 8 cut(s) 59, 509, 832, 1555, 1840, 1913, 2496, 2713
BsmAI GTCTC 1 cut(s) 1154
BsmFI GGGAC 8 cut(s) 59, 509, 832, 1555, 1840, 1913, 2496, 2713
BsmI GAATGC 1 cut(s) 2461
BsoBI CYCGRG 2 cut(s) 15, 1209
Bsp120I GGGCCC 3 cut(s) 51, 219, 2558
Bsp13I TCCGGA 1 cut(s) 1267
Bsp1720I GCTNAGC 4 cut(s) 963, 1287, 2319, 2490
Bsp19I CCATGG 2 cut(s) 450, 891
Bsp68I TCGCGA 1 cut(s) 194
BspDI ATCGAT 1 cut(s) 2076
BspEI TCCGGA 1 cut(s) 1267
BspFNI CGCG 5 cut(s) 194, 228, 935, 940, 2697
BspHI TCATGA 1 cut(s) 210
BspMAI CTGCAG 3 cut(s) 2101, 2383, 2539
BspMI ACCTGC 1 cut(s) 2728
BspPI GGATC 4 cut(s) 527, 1105, 1737, 2492
BspT107I GGYRCC 1 cut(s) 2608
BsrBI CCGCTC 1 cut(s) 2399
BsrDI GCAATG 1 cut(s) 1628
BsrFI RCCGGY 4 cut(s) 371, 609, 818, 2314
BsrI ACTGG 8 cut(s) 221, 346, 653, 1468, 1820, 1830, 1975, 2299
BssAI RCCGGY 4 cut(s) 371, 609, 818, 2314
BssECI CCNNGG 9 cut(s) 171, 226, 450, 891, 1093, 1779, 1863, 2248, 2695
BssNI GRCGYC 2 cut(s) 866, 2609
BssT1I CCWWGG 5 cut(s) 171, 450, 891, 1863, 2248
Bst4CI ACNGT 6 cut(s) 73, 1085, 1360, 1572, 1606, 2059
BstACI GRCGYC 2 cut(s) 866, 2609
BstAPI GCANNNNNTGC 2 cut(s) 2186, 2378
BstDSI CCRYGG 4 cut(s) 226, 450, 891, 2695
BstEII GGTNACC 1 cut(s) 2237
BstENI CCTNNNNNAGG 2 cut(s) 170, 1667
BstF5I GGATG 8 cut(s) 24, 749, 964, 1251, 1678, 1762, 1816, 2564
BstFNI CGCG 5 cut(s) 194, 228, 935, 940, 2697
BstH2I RGCGCY 2 cut(s) 970, 2612
BstHHI GCGC 8 cut(s) 269, 615, 862, 925, 940, 969, 2611, 2681
BstMAI GTCTC 1 cut(s) 1154
BstPI GGTNACC 1 cut(s) 2237
BstSFI CTRYAG 7 cut(s) 593, 714, 1175, 1529, 2097, 2379, 2535
BstSLI GKGCMC 5 cut(s) 55, 223, 2142, 2562, 2578
BstUI CGCG 5 cut(s) 194, 228, 935, 940, 2697
BstX2I RGATCY 1 cut(s) 2497
BstXI CCANNNNNNTGG 3 cut(s) 391, 1823, 1870
BstYI RGATCY 1 cut(s) 2497
Bsu15I ATCGAT 1 cut(s) 2076
Bsu36I CCTNAGG 1 cut(s) 1668
BsuI GTATCC 4 cut(s) 1484, 1627, 2192, 2447
BsuTUI ATCGAT 1 cut(s) 2076
BtgI CCRYGG 4 cut(s) 226, 450, 891, 2695
BtsCI GGATG 8 cut(s) 24, 749, 964, 1251, 1678, 1762, 1816, 2564
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 3 cut(s) 558, 646, 1365
BtuMI TCGCGA 1 cut(s) 194
BveI ACCTGC 1 cut(s) 2728
CaiI CAGNNNCTG 4 cut(s) 1840, 2441, 2480, 2501
CciI TCATGA 1 cut(s) 210
CfoI GCGC 8 cut(s) 269, 615, 862, 925, 940, 969, 2611, 2681
Cfr10I RCCGGY 4 cut(s) 371, 609, 818, 2314
Cfr42I CCGCGG 2 cut(s) 229, 2698
ClaI ATCGAT 1 cut(s) 2076
CseI GACGC 1 cut(s) 1534
CsiI ACCWGGT 1 cut(s) 1501
Csp6I GTAC 5 cut(s) 781, 871, 1263, 2055, 2554
CviAII CATG 6 cut(s) 211, 244, 451, 892, 1258, 2035
CviQI GTAC 5 cut(s) 781, 871, 1263, 2055, 2554
DinI GGCGCC 1 cut(s) 2610
DraIII CACNNNGTG 1 cut(s) 1505
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
EaeI YGGCCR 4 cut(s) 114, 729, 909, 2587
EciI GGCGGA 5 cut(s) 82, 133, 876, 1014, 2763
Ecl136II GAGCTC 2 cut(s) 1255, 1469
Eco130I CCWWGG 5 cut(s) 171, 450, 891, 1863, 2248
Eco24I GRGCYC 7 cut(s) 22, 55, 223, 1257, 1471, 1680, 2562
Eco32I GATATC 3 cut(s) 535, 1813, 2032
Eco47III AGCGCT 1 cut(s) 968
Eco53kI GAGCTC 2 cut(s) 1255, 1469
Eco57I CTGAAG 1 cut(s) 1602
Eco81I CCTNAGG 1 cut(s) 1668
Eco88I CYCGRG 2 cut(s) 15, 1209
Eco91I GGTNACC 1 cut(s) 2237
EcoICRI GAGCTC 2 cut(s) 1255, 1469
EcoNI CCTNNNNNAGG 2 cut(s) 170, 1667
EcoO109I RGGNCCY 6 cut(s) 52, 568, 1009, 1331, 2559, 2700
EcoO65I GGTNACC 1 cut(s) 2237
EcoRV GATATC 3 cut(s) 535, 1813, 2032
EcoT14I CCWWGG 5 cut(s) 171, 450, 891, 1863, 2248
EcoT22I ATGCAT 1 cut(s) 1764
EcoT38I GRGCYC 7 cut(s) 22, 55, 223, 1257, 1471, 1680, 2562
EgeI GGCGCC 1 cut(s) 2610
EheI GGCGCC 1 cut(s) 2610
ErhI CCWWGG 5 cut(s) 171, 450, 891, 1863, 2248
FaeI CATG 6 cut(s) 214, 247, 454, 895, 1261, 2038
FalI AAGNNNNNCTT 2 cut(s) 1028, 1060
FaqI GGGAC 8 cut(s) 59, 509, 832, 1555, 1840, 1913, 2496, 2713
FatI CATG 6 cut(s) 210, 243, 450, 891, 1257, 2034
FauNDI CATATG 2 cut(s) 2329, 2485
FbaI TGATCA 1 cut(s) 1296
FblI GTMKAC 1 cut(s) 2255
FokI GGATG 8 cut(s) 11, 736, 971, 1258, 1685, 1749, 1803, 2551
FriOI GRGCYC 7 cut(s) 22, 55, 223, 1257, 1471, 1680, 2562
FspBI CTAG 7 cut(s) 699, 972, 1242, 1347, 1458, 1706, 2220
GlaI GCGC 8 cut(s) 268, 614, 861, 924, 939, 968, 2610, 2680
GsaI CCCAGC 6 cut(s) 49, 339, 1058, 1770, 2194, 2412
GsuI CTGGAG 7 cut(s) 17, 572, 1485, 1649, 2337, 2400, 2457
HaeII RGCGCY 2 cut(s) 970, 2612
HgaI GACGC 1 cut(s) 1534
HhaI GCGC 8 cut(s) 269, 615, 862, 925, 940, 969, 2611, 2681
Hin1I GRCGYC 2 cut(s) 866, 2609
Hin1II CATG 6 cut(s) 214, 247, 454, 895, 1261, 2038
Hin6I GCGC 8 cut(s) 267, 613, 860, 923, 938, 967, 2609, 2679
HinP1I GCGC 8 cut(s) 267, 613, 860, 923, 938, 967, 2609, 2679
HincII GTYRAC 3 cut(s) 979, 1356, 2213
HindII GTYRAC 3 cut(s) 979, 1356, 2213
HpaI GTTAAC 1 cut(s) 1356
HphI GGTGA 7 cut(s) 373, 808, 1385, 1445, 1517, 2177, 2397
Hpy166II GTNNAC 9 cut(s) 202, 636, 804, 979, 1356, 1376, 2213, 2256, 2576
Hpy188I TCNGA 5 cut(s) 352, 994, 1219, 1239, 2772
Hpy8I GTNNAC 9 cut(s) 202, 636, 804, 979, 1356, 1376, 2213, 2256, 2576
Hpy99I CGWCG 6 cut(s) 275, 371, 737, 847, 868, 871
HpyCH4III ACNGT 6 cut(s) 73, 1085, 1360, 1572, 1606, 2059
HpyCH4IV ACGT 1 cut(s) 866
HpySE526I ACGT 1 cut(s) 866
Hsp92I GRCGYC 2 cut(s) 866, 2609
Hsp92II CATG 6 cut(s) 214, 247, 454, 895, 1261, 2038
HspAI GCGC 8 cut(s) 267, 613, 860, 923, 938, 967, 2609, 2679
KasI GGCGCC 1 cut(s) 2608
Kpn2I TCCGGA 1 cut(s) 1267
KroI GCCGGC 1 cut(s) 371
KroNI GCCGGC 1 cut(s) 373
Ksp22I TGATCA 1 cut(s) 1296
KspAI GTTAAC 1 cut(s) 1356
KspI CCGCGG 2 cut(s) 229, 2698
MabI ACCWGGT 1 cut(s) 1501
MaeI CTAG 7 cut(s) 699, 972, 1242, 1347, 1458, 1706, 2220
MaeII ACGT 1 cut(s) 866
MbiI CCGCTC 1 cut(s) 2399
MboII GAAGA 7 cut(s) 319, 610, 613, 687, 699, 908, 1056
MflI RGATCY 1 cut(s) 2497
MlsI TGGCCA 2 cut(s) 911, 2589
MluCI AATT 5 cut(s) 1231, 1392, 1419, 1554, 1959
MluNI TGGCCA 2 cut(s) 911, 2589
Mly113I GGCGCC 1 cut(s) 2609
MlyI GAGTC 3 cut(s) 822, 848, 1174
MmeI TCCRAC 1 cut(s) 1262
Mox20I TGGCCA 2 cut(s) 911, 2589
Mph1103I ATGCAT 1 cut(s) 1764
MroI TCCGGA 1 cut(s) 1267
MroNI GCCGGC 1 cut(s) 371
MscI TGGCCA 2 cut(s) 911, 2589
MseI TTAA 1 cut(s) 1355
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 2 cut(s) 911, 2589
MspA1I CMGCKG 8 cut(s) 49, 228, 907, 1837, 1933, 2102, 2585, 2697
Mva1269I GAATGC 1 cut(s) 2461
MvnI CGCG 5 cut(s) 194, 228, 935, 940, 2697
NaeI GCCGGC 1 cut(s) 373
NarI GGCGCC 1 cut(s) 2609
NciI CCSGG 3 cut(s) 162, 1073, 2551
NcoI CCATGG 2 cut(s) 450, 891
NdeI CATATG 2 cut(s) 2329, 2485
NgoMIV GCCGGC 1 cut(s) 371
NlaIII CATG 6 cut(s) 214, 247, 454, 895, 1261, 2038
NmeAIII GCCGAG 4 cut(s) 20, 205, 459, 806
NmuCI GTSAC 4 cut(s) 512, 814, 1505, 2403
NruI TCGCGA 1 cut(s) 194
NsiI ATGCAT 1 cut(s) 1764
PagI TCATGA 1 cut(s) 210
PaqCI CACCTGC 1 cut(s) 2728
PctI GAATGC 1 cut(s) 2461
PdiI GCCGGC 1 cut(s) 373
PfeI GAWTC 7 cut(s) 315, 761, 995, 1198, 1214, 1322, 2168
PflFI GACNNNGTC 1 cut(s) 1183
PflMI CCANNNNNTGG 6 cut(s) 1804, 2270, 2522, 2570, 2585, 2600
PfoI TCCNGGA 1 cut(s) 2416
PleI GAGTC 3 cut(s) 821, 848, 1174
PluTI GGCGCC 1 cut(s) 2612
PpsI GAGTC 3 cut(s) 821, 848, 1174
PpuMI RGGWCCY 2 cut(s) 1331, 2700
Psp124BI GAGCTC 2 cut(s) 1257, 1471
Psp5II RGGWCCY 2 cut(s) 1331, 2700
PspEI GGTNACC 1 cut(s) 2237
PspFI CCCAGC 6 cut(s) 45, 335, 1054, 1766, 2190, 2408
PspOMI GGGCCC 3 cut(s) 51, 219, 2558
PspPPI RGGWCCY 2 cut(s) 1331, 2700
PstI CTGCAG 3 cut(s) 2101, 2383, 2539
PstNI CAGNNNCTG 4 cut(s) 1840, 2441, 2480, 2501
PsuI RGATCY 1 cut(s) 2497
PsyI GACNNNGTC 1 cut(s) 1183
PvuII CAGCTG 3 cut(s) 907, 1837, 2585
RruI TCGCGA 1 cut(s) 194
RsaI GTAC 5 cut(s) 782, 872, 1264, 2056, 2555
RsaNI GTAC 5 cut(s) 781, 871, 1263, 2055, 2554
RseI CAYNNNNRTG 1 cut(s) 449
SacI GAGCTC 2 cut(s) 1257, 1471
SacII CCGCGG 2 cut(s) 229, 2698
SaqAI TTAA 1 cut(s) 1355
SchI GAGTC 3 cut(s) 822, 848, 1174
SexAI ACCWGGT 1 cut(s) 1501
SfcI CTRYAG 7 cut(s) 593, 714, 1175, 1529, 2097, 2379, 2535
SfiI GGCCNNNNNGGCC 1 cut(s) 50
SfoI GGCGCC 1 cut(s) 2610
Sfr303I CCGCGG 2 cut(s) 229, 2698
SgrBI CCGCGG 2 cut(s) 229, 2698
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 3 cut(s) 2012, 2130, 2175
SmoI CTYRAG 3 cut(s) 2012, 2130, 2175
Sse9I AATT 5 cut(s) 1231, 1392, 1419, 1554, 1959
SspDI GGCGCC 1 cut(s) 2608
SspMI CTAG 7 cut(s) 699, 972, 1242, 1347, 1458, 1706, 2220
SstI GAGCTC 2 cut(s) 1257, 1471
StyI CCWWGG 5 cut(s) 171, 450, 891, 1863, 2248
TaaI ACNGT 6 cut(s) 73, 1085, 1360, 1572, 1606, 2059
TaiI ACGT 1 cut(s) 869
TaqI TCGA 3 cut(s) 273, 1100, 2076
TaqII GACCGA 2 cut(s) 327, 2198
TasI AATT 5 cut(s) 1231, 1392, 1419, 1554, 1959
TauI GCSGC 8 cut(s) 179, 228, 231, 296, 799, 938, 1974, 2748
TfiI GAWTC 7 cut(s) 315, 761, 995, 1198, 1214, 1322, 2168
Tru1I TTAA 1 cut(s) 1355
Tru9I TTAA 1 cut(s) 1355
TscAI CASTG 3 cut(s) 565, 653, 1365
TseFI GTSAC 4 cut(s) 512, 814, 1505, 2403
Tsp45I GTSAC 4 cut(s) 512, 814, 1505, 2403
TspDTI ATGAA 2 cut(s) 227, 1317
TspGWI ACGGA 2 cut(s) 487, 2169
TspRI CASTG 3 cut(s) 565, 653, 1365
Tth111I GACNNNGTC 1 cut(s) 1183
Van91I CCANNNNNTGG 6 cut(s) 1804, 2270, 2522, 2570, 2585, 2600
VneI GTGCAC 1 cut(s) 2574
XagI CCTNNNNNAGG 2 cut(s) 170, 1667
XapI RAATTY 1 cut(s) 1392
XbaI TCTAGA 1 cut(s) 1346
XcmI CCANNNNNNNNNTGG 1 cut(s) 2597
XmiI GTMKAC 1 cut(s) 2255
XspI CTAG 7 cut(s) 699, 972, 1242, 1347, 1458, 1706, 2220
ZraI GACGTC 1 cut(s) 867
Zsp2I ATGCAT 1 cut(s) 1764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.