Polyadenylate-binding protein-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11440 AT5G11440 AT5G25540 AT5G25540 AT5G25540 |
| fragaria_vesca | FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 |
| malus_domestica | MD08G1136600.v1.1 |
| prunus_persica | Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 |
| pyrus_communis | pycom08g11540 pycom15g10400 pycom15g10410 |
| rosa_chinensis | RchiOBHm_Chr6g0312751 |
| rosa_laevigata | RLG00000010301 |
| rosa_multiflora | Rmu_ssc0000412.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00156530 |
| rosa_rugosa | Rorug06G0399200 Rorug06G0399300 Rorug06G0399400 Rorug06G0399500 |
| rosa_samantha | Rh6AG516300 Rh6BG527600 Rh6CG532500 Rh6DG518600 |
| rosa_wichuraiana | Rw6G044860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 141 |
| AgsI | TTSAA | 2 cut(s) | 25, 181 |
| AjnI | CCWGG | 2 cut(s) | 7, 192 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 199 |
| ApeKI | GCWGC | 3 cut(s) | 35, 38, 108 |
| ApoI | RAATTY | 1 cut(s) | 141 |
| BbvI | GCAGC | 3 cut(s) | 47, 50, 120 |
| BciT130I | CCWGG | 2 cut(s) | 9, 194 |
| BclI | TGATCA | 1 cut(s) | 115 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BisI | GCNGC | 4 cut(s) | 36, 39, 106, 109 |
| BlsI | GCNGC | 4 cut(s) | 37, 40, 107, 110 |
| Bme1390I | CCNGG | 2 cut(s) | 9, 194 |
| BmiI | GGNNCC | 1 cut(s) | 133 |
| BmrFI | CCNGG | 2 cut(s) | 9, 194 |
| BmsI | GCATC | 1 cut(s) | 177 |
| BpmI | CTGGAG | 1 cut(s) | 193 |
| BsaJI | CCNNGG | 2 cut(s) | 192, 193 |
| Bse3DI | GCAATG | 1 cut(s) | 118 |
| BseBI | CCWGG | 2 cut(s) | 9, 194 |
| BseDI | CCNNGG | 2 cut(s) | 192, 193 |
| BseMI | GCAATG | 1 cut(s) | 118 |
| BseXI | GCAGC | 3 cut(s) | 47, 50, 120 |
| BslFI | GGGAC | 1 cut(s) | 210 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 210 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 133 |
| BsrDI | GCAATG | 1 cut(s) | 118 |
| BssECI | CCNNGG | 2 cut(s) | 192, 193 |
| BssMI | GATC | 1 cut(s) | 115 |
| Bst2UI | CCWGG | 2 cut(s) | 9, 194 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstNI | CCWGG | 2 cut(s) | 9, 194 |
| BstSCI | CCNGG | 2 cut(s) | 7, 192 |
| BstV1I | GCAGC | 3 cut(s) | 47, 50, 120 |
| CaiI | CAGNNNCTG | 1 cut(s) | 199 |
| CviJI | RGCY | 3 cut(s) | 7, 105, 172 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 105, 172 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| EcoRII | CCWGG | 2 cut(s) | 7, 192 |
| FaiI | YATR | 3 cut(s) | 43, 164, 227 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 161, 193 |
| FaqI | GGGAC | 1 cut(s) | 210 |
| FbaI | TGATCA | 1 cut(s) | 115 |
| Fnu4HI | GCNGC | 4 cut(s) | 36, 39, 106, 109 |
| Fsp4HI | GCNGC | 4 cut(s) | 36, 39, 106, 109 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GluI | GCNGC | 4 cut(s) | 36, 39, 106, 109 |
| GsuI | CTGGAG | 1 cut(s) | 193 |
| HindIII | AAGCTT | 1 cut(s) | 170 |
| HinfI | GANTC | 4 cut(s) | 25, 98, 153, 213 |
| Hpy188I | TCNGA | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 1 cut(s) | 210 |
| HpyCH4V | TGCA | 1 cut(s) | 202 |
| Ksp22I | TGATCA | 1 cut(s) | 115 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LpnPI | CCDG | 6 cut(s) | 21, 108, 163, 179, 206, 223 |
| Lsp1109I | GCAGC | 3 cut(s) | 47, 50, 120 |
| LweI | GCATC | 1 cut(s) | 177 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MaeIII | GTNAC | 1 cut(s) | 85 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 2 cut(s) | 9, 169 |
| MluCI | AATT | 1 cut(s) | 141 |
| MlyI | GAGTC | 1 cut(s) | 222 |
| MnlI | CCTC | 2 cut(s) | 54, 146 |
| MspR9I | CCNGG | 2 cut(s) | 9, 194 |
| MvaI | CCWGG | 2 cut(s) | 9, 194 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 133 |
| NmuCI | GTSAC | 1 cut(s) | 85 |
| PasI | CCCWGGG | 1 cut(s) | 193 |
| PfeI | GAWTC | 3 cut(s) | 25, 98, 153 |
| PkrI | GCNGC | 4 cut(s) | 37, 40, 107, 110 |
| PleI | GAGTC | 1 cut(s) | 221 |
| PpsI | GAGTC | 1 cut(s) | 221 |
| Psp6I | CCWGG | 2 cut(s) | 7, 192 |
| PspGI | CCWGG | 2 cut(s) | 7, 192 |
| PspN4I | GGNNCC | 1 cut(s) | 133 |
| PstNI | CAGNNNCTG | 1 cut(s) | 199 |
| SatI | GCNGC | 4 cut(s) | 36, 39, 106, 109 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SchI | GAGTC | 1 cut(s) | 222 |
| ScrFI | CCNGG | 2 cut(s) | 9, 194 |
| SetI | ASST | 1 cut(s) | 174 |
| SfaNI | GCATC | 1 cut(s) | 177 |
| SgeI | CNNG | 9 cut(s) | 20, 21, 70, 114, 135, 162, 205, 206, 222 |
| Sse9I | AATT | 1 cut(s) | 141 |
| SsiI | CCGC | 1 cut(s) | 106 |
| SspMI | CTAG | 1 cut(s) | 102 |
| StyD4I | CCNGG | 2 cut(s) | 7, 192 |
| TasI | AATT | 1 cut(s) | 141 |
| TauI | GCSGC | 1 cut(s) | 108 |
| TfiI | GAWTC | 3 cut(s) | 25, 98, 153 |
| TseFI | GTSAC | 1 cut(s) | 85 |
| TseI | GCWGC | 3 cut(s) | 35, 38, 108 |
| Tsp45I | GTSAC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 141 |
| XspI | CTAG | 1 cut(s) | 102 |