pycom15g19270

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0003206
Physical Location & Seq
Reverse (-)
13718803 .. 13721175
2373 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 915 bp
ATGCTGGGAATTATTGTCACCATCTTTTCCAGAGGAAGAACTGTCCTGATGTTGACGATTTCAATTGACAAGGCTGTGCTGTTGAGATTTTCCCATGTCGATTATAGAAGTCATCAAAAGTTTCACAGGATCAATGCCACTTGGAAAAGGGATTCAAAATCCTCCCATCCGAGGAAGATGGAAGAGCTGTCAGTAGAGATTCCAACACAAACTATTCCTCACTGTGAACCATCAAAACATCCTGATCTGCAATTTGATCGGCTGCAACCATCAGATGAAGATTTAGATCAAGAGAAAAAGTTGGAATTTGGACAATTTGTTGCACGAGAGGCCGCACTGGATGAAGAATACTGGACAGCAGCATGGTTACGTGCAGAAAGTCACTGGGAGGAGCGAAAAAATGACCGATTTGCTGAGAGTAACAAAAGGAAATTTGCAGACCAGGAATTTAATGCTATAAAAAGACGAACAAAGGGGCAGCAGAGGCAGACATGCACATGCATTATCACGGTGAAGAAGGACACAAAGAATGTGAAACGTACTGTTGTGAAAAGTGTAGTTGGAACACTTGATTTGAGCATTCGGTACTTGTTGGATGGAGAGACCTTTCCAGGGGAACGGGCAAACGCTCCTCTCTTTTGCAGTATCAACAGGACACTGTCAAGTAAATATGGTTATATTTCAAACTTATGTGTGGCCAAAGCAGCACGACGCCAGGGTATTGCCAGCAATATGTTACAGTTTGCTATTAGATCCGCAATGTTAAATGCTGATGTCGAACAGATATATGTGCATGTGCATAAAAAGAACAAACCCGCGCAGGAACTGTACCATAAGCTGGGCTTTGAGATCATCGAAAGGGCGAGCTCTCAATTGTCTGAGGAGCAAACCTATTTGCTTTGTTTCAAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10

Protein Analysis

305

Amino Acids

35.21

Weight (kDa)

9.33

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 165 - 282 9.2e-13 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 219 - 283 4.8e-10 Acetyltransferase (GNAT) domain
FR47 PF08445 219 - 286 2.5e-09 FR47-like protein
Acetyltransf_10 PF13673 222 - 286 6e-09 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 838
AccII CGCG 1 cut(s) 818
AciI CCGC 3 cut(s) 333, 756, 816
AclWI GGATC 2 cut(s) 137, 747
AcoI YGGCCR 1 cut(s) 696
AcsI RAATTY 3 cut(s) 305, 431, 446
AcyI GRCGYC 1 cut(s) 712
AfaI GTAC 3 cut(s) 541, 587, 830
AfiI CCNNNNNNNGG 3 cut(s) 171, 612, 838
AgsI TTSAA 4 cut(s) 63, 156, 684, 907
AjnI CCWGG 3 cut(s) 441, 610, 714
AluBI AGCT 3 cut(s) 187, 838, 867
AluI AGCT 3 cut(s) 187, 838, 867
Alw21I GWGCWC 1 cut(s) 869
Alw26I GTCTC 1 cut(s) 596
AlwI GGATC 2 cut(s) 137, 747
AlwNI CAGNNNCTG 1 cut(s) 826
AoxI GGCC 3 cut(s) 330, 696, 909
ApeKI GCWGC 4 cut(s) 262, 359, 478, 704
ApoI RAATTY 3 cut(s) 305, 431, 446
AspLEI GCGC 1 cut(s) 820
AsuHPI GGTGA 2 cut(s) 10, 523
BalI TGGCCA 1 cut(s) 698
BanII GRGCYC 1 cut(s) 869
BauI CACGAG 1 cut(s) 324
Bbv12I GWGCWC 1 cut(s) 869
BbvI GCAGC 4 cut(s) 249, 371, 490, 716
BccI CCATC 6 cut(s) 29, 172, 174, 238, 277, 590
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 3 cut(s) 443, 612, 716
BcoDI GTCTC 1 cut(s) 596
BisI GCNGC 5 cut(s) 263, 333, 360, 479, 705
BlsI GCNGC 5 cut(s) 264, 334, 361, 480, 706
Bme1390I CCNGG 3 cut(s) 443, 612, 716
BmrFI CCNGG 3 cut(s) 443, 612, 716
BmrI ACTGGG 1 cut(s) 394
BmuI ACTGGG 1 cut(s) 394
BsaAI YACGTR 1 cut(s) 371
BsaBI GATNNNNATC 1 cut(s) 285
BsaHI GRCGYC 1 cut(s) 712
BsaI GGTCTC 1 cut(s) 596
BsaJI CCNNGG 3 cut(s) 170, 611, 715
Bsc4I CCNNNNNNNGG 3 cut(s) 171, 612, 838
Bse1I ACTGG 3 cut(s) 342, 356, 389
Bse3DI GCAATG 1 cut(s) 765
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 3 cut(s) 443, 612, 716
BseDI CCNNGG 3 cut(s) 170, 611, 715
BseGI GGATG 4 cut(s) 166, 238, 346, 601
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 3 cut(s) 171, 612, 838
BseMI GCAATG 1 cut(s) 765
BseMII CTCAG 2 cut(s) 405, 870
BseNI ACTGG 3 cut(s) 342, 356, 389
BseRI GAGGAG 3 cut(s) 404, 621, 896
BseXI GCAGC 4 cut(s) 249, 371, 490, 716
BseYI CCCAGC 2 cut(s) 4, 838
BsgI GTGCAG 1 cut(s) 393
Bsh1236I CGCG 1 cut(s) 818
BshFI GGCC 3 cut(s) 332, 698, 911
BsiHKAI GWGCWC 1 cut(s) 869
BslI CCNNNNNNNGG 3 cut(s) 171, 612, 838
BsmAI GTCTC 1 cut(s) 596
BsmI GAATGC 1 cut(s) 579
BsnI GGCC 3 cut(s) 332, 698, 911
Bso31I GGTCTC 1 cut(s) 596
Bsp1286I GDGCHC 1 cut(s) 869
Bsp143I GATC 6 cut(s) 129, 244, 256, 286, 752, 849
BspACI CCGC 3 cut(s) 333, 756, 816
BspANI GGCC 3 cut(s) 332, 698, 911
BspCNI CTCAG 2 cut(s) 406, 871
BspFNI CGCG 1 cut(s) 818
BspPI GGATC 2 cut(s) 137, 747
BspQI GCTCTTC 1 cut(s) 177
BspTNI GGTCTC 1 cut(s) 596
BsrDI GCAATG 1 cut(s) 765
BsrI ACTGG 3 cut(s) 342, 356, 389
BssECI CCNNGG 3 cut(s) 170, 611, 715
BssMI GATC 6 cut(s) 129, 244, 256, 286, 752, 849
BssNI GRCGYC 1 cut(s) 712
BssSI CACGAG 1 cut(s) 324
Bst2BI CACGAG 1 cut(s) 324
Bst2UI CCWGG 3 cut(s) 443, 612, 716
Bst4CI ACNGT 7 cut(s) 43, 224, 511, 544, 660, 741, 828
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 1 cut(s) 712
BstBAI YACGTR 1 cut(s) 371
BstC8I GCNNGC 2 cut(s) 727, 865
BstDEI CTNAG 2 cut(s) 414, 879
BstF5I GGATG 4 cut(s) 166, 238, 346, 601
BstFNI CGCG 1 cut(s) 818
BstHHI GCGC 1 cut(s) 820
BstKTI GATC 6 cut(s) 132, 247, 259, 289, 755, 852
BstMAI GTCTC 1 cut(s) 596
BstMBI GATC 6 cut(s) 129, 244, 256, 286, 752, 849
BstMWI GCNNNNNNNGC 3 cut(s) 329, 484, 704
BstNI CCWGG 3 cut(s) 443, 612, 716
BstNSI RCATGY 3 cut(s) 495, 501, 797
BstSCI CCNGG 3 cut(s) 441, 610, 714
BstUI CGCG 1 cut(s) 818
BstV1I GCAGC 4 cut(s) 249, 371, 490, 716
BstX2I RGATCY 1 cut(s) 752
BstYI RGATCY 1 cut(s) 752
BsuRI GGCC 3 cut(s) 332, 698, 911
BtsCI GGATG 4 cut(s) 166, 238, 346, 601
BtsIMutI CAGTG 4 cut(s) 220, 335, 382, 656
Cac8I GCNNGC 2 cut(s) 727, 865
CaiI CAGNNNCTG 1 cut(s) 826
CfoI GCGC 1 cut(s) 820
CseI GACGC 1 cut(s) 720
Csp6I GTAC 3 cut(s) 540, 586, 829
CviAII CATG 5 cut(s) 95, 363, 492, 498, 794
CviJI RGCY 9 cut(s) 74, 187, 262, 332, 698, 838, 843, 867, 911
CviKI_1 RGCY 9 cut(s) 74, 187, 262, 332, 698, 838, 843, 867, 911
CviQI GTAC 3 cut(s) 540, 586, 829
DdeI CTNAG 2 cut(s) 414, 879
DpnI GATC 6 cut(s) 131, 246, 258, 288, 754, 851
DpnII GATC 6 cut(s) 129, 244, 256, 286, 752, 849
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 867
Eco147I AGGCCT 1 cut(s) 911
Eco24I GRGCYC 1 cut(s) 869
Eco31I GGTCTC 1 cut(s) 596
Eco53kI GAGCTC 1 cut(s) 867
EcoICRI GAGCTC 1 cut(s) 867
EcoRII CCWGG 3 cut(s) 441, 610, 714
EcoT22I ATGCAT 1 cut(s) 503
EcoT38I GRGCYC 1 cut(s) 869
FaeI CATG 5 cut(s) 98, 366, 495, 501, 797
FalI AAGNNNNNCTT 2 cut(s) 827, 859
FatI CATG 5 cut(s) 94, 362, 491, 497, 793
FauI CCCGC 1 cut(s) 823
Fnu4HI GCNGC 5 cut(s) 263, 333, 360, 479, 705
FokI GGATG 4 cut(s) 153, 225, 353, 608
FriOI GRGCYC 1 cut(s) 869
Fsp4HI GCNGC 5 cut(s) 263, 333, 360, 479, 705
GlaI GCGC 1 cut(s) 819
GluI GCNGC 5 cut(s) 263, 333, 360, 479, 705
GsaI CCCAGC 2 cut(s) 8, 842
HaeIII GGCC 3 cut(s) 332, 698, 911
HgaI GACGC 1 cut(s) 720
HhaI GCGC 1 cut(s) 820
Hin1I GRCGYC 1 cut(s) 712
Hin1II CATG 5 cut(s) 98, 366, 495, 501, 797
Hin6I GCGC 1 cut(s) 818
HinP1I GCGC 1 cut(s) 818
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HinfI GANTC 2 cut(s) 152, 199
HphI GGTGA 2 cut(s) 10, 523
Hpy166II GTNNAC 2 cut(s) 54, 227
Hpy188I TCNGA 3 cut(s) 171, 274, 880
Hpy188III TCNNGA 4 cut(s) 30, 46, 242, 290
Hpy8I GTNNAC 2 cut(s) 54, 227
Hpy99I CGWCG 1 cut(s) 714
HpyAV CCTTC 1 cut(s) 511
HpyCH4III ACNGT 7 cut(s) 43, 224, 511, 544, 660, 741, 828
HpyCH4IV ACGT 2 cut(s) 370, 538
HpyF10VI GCNNNNNNNGC 3 cut(s) 329, 484, 704
HpyF3I CTNAG 2 cut(s) 414, 879
HpySE526I ACGT 2 cut(s) 370, 538
Hsp92I GRCGYC 1 cut(s) 712
Hsp92II CATG 5 cut(s) 98, 366, 495, 501, 797
HspAI GCGC 1 cut(s) 818
Kzo9I GATC 6 cut(s) 129, 244, 256, 286, 752, 849
LguI GCTCTTC 1 cut(s) 177
LmnI GCTCC 3 cut(s) 391, 634, 883
Lsp1109I GCAGC 4 cut(s) 249, 371, 490, 716
MaeII ACGT 2 cut(s) 370, 538
MaeIII GTNAC 5 cut(s) 16, 366, 380, 419, 735
MalI GATC 6 cut(s) 131, 246, 258, 288, 754, 851
MboI GATC 6 cut(s) 129, 244, 256, 286, 752, 849
MboII GAAGA 6 cut(s) 48, 187, 194, 290, 356, 526
MfeI CAATTG 2 cut(s) 63, 872
MflI RGATCY 1 cut(s) 752
MhlI GDGCHC 1 cut(s) 869
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 8 cut(s) 9, 63, 251, 305, 314, 431, 446, 872
MluNI TGGCCA 1 cut(s) 698
MmeI TCCRAC 4 cut(s) 227, 282, 541, 573
MnlI CCTC 9 cut(s) 26, 165, 172, 228, 322, 382, 477, 642, 874
Mox20I TGGCCA 1 cut(s) 698
Mph1103I ATGCAT 1 cut(s) 503
MscI TGGCCA 1 cut(s) 698
MseI TTAA 2 cut(s) 450, 764
MslI CAYNNNNRTG 1 cut(s) 496
Msp20I TGGCCA 1 cut(s) 698
MspR9I CCNGG 3 cut(s) 443, 612, 716
MunI CAATTG 2 cut(s) 63, 872
Mva1269I GAATGC 1 cut(s) 579
MvaI CCWGG 3 cut(s) 443, 612, 716
MvnI CGCG 1 cut(s) 818
MwoI GCNNNNNNNGC 3 cut(s) 329, 484, 704
NdeII GATC 6 cut(s) 129, 244, 256, 286, 752, 849
NlaIII CATG 5 cut(s) 98, 366, 495, 501, 797
NmuCI GTSAC 2 cut(s) 16, 380
NsiI ATGCAT 1 cut(s) 503
NspI RCATGY 3 cut(s) 495, 501, 797
PceI AGGCCT 1 cut(s) 911
PciSI GCTCTTC 1 cut(s) 177
PctI GAATGC 1 cut(s) 579
PfeI GAWTC 2 cut(s) 152, 199
PflFI GACNNNGTC 1 cut(s) 658
PflMI CCANNNNNTGG 1 cut(s) 838
PkrI GCNGC 5 cut(s) 264, 334, 361, 480, 706
Ppu21I YACGTR 1 cut(s) 371
Psp124BI GAGCTC 1 cut(s) 869
Psp6I CCWGG 3 cut(s) 441, 610, 714
PspFI CCCAGC 2 cut(s) 4, 838
PspGI CCWGG 3 cut(s) 441, 610, 714
PstNI CAGNNNCTG 1 cut(s) 826
PsuI RGATCY 1 cut(s) 752
PsyI GACNNNGTC 1 cut(s) 658
RsaI GTAC 3 cut(s) 541, 587, 830
RsaNI GTAC 3 cut(s) 540, 586, 829
RseI CAYNNNNRTG 1 cut(s) 496
SacI GAGCTC 1 cut(s) 869
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 2 cut(s) 450, 764
SatI GCNGC 5 cut(s) 263, 333, 360, 479, 705
Sau3AI GATC 6 cut(s) 129, 244, 256, 286, 752, 849
ScrFI CCNGG 3 cut(s) 443, 612, 716
SduI GDGCHC 1 cut(s) 869
SetI ASST 7 cut(s) 189, 373, 541, 608, 840, 869, 893
SmiMI CAYNNNNRTG 1 cut(s) 496
Sse9I AATT 8 cut(s) 9, 63, 251, 305, 314, 431, 446, 872
SseBI AGGCCT 1 cut(s) 911
SsiI CCGC 3 cut(s) 333, 756, 816
SstI GAGCTC 1 cut(s) 869
StuI AGGCCT 1 cut(s) 911
StyD4I CCNGG 3 cut(s) 441, 610, 714
TaaI ACNGT 7 cut(s) 43, 224, 511, 544, 660, 741, 828
TaiI ACGT 2 cut(s) 373, 541
TaqI TCGA 3 cut(s) 99, 777, 855
TaqII GACCGA 1 cut(s) 420
TasI AATT 8 cut(s) 9, 63, 251, 305, 314, 431, 446, 872
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 2 cut(s) 152, 199
Tru1I TTAA 2 cut(s) 450, 764
Tru9I TTAA 2 cut(s) 450, 764
TscAI CASTG 4 cut(s) 227, 342, 389, 663
TseFI GTSAC 2 cut(s) 16, 380
TseI GCWGC 4 cut(s) 262, 359, 478, 704
Tsp45I GTSAC 2 cut(s) 16, 380
TspDTI ATGAA 2 cut(s) 291, 357
TspRI CASTG 4 cut(s) 227, 342, 389, 663
Tth111I GACNNNGTC 1 cut(s) 658
Van91I CCANNNNNTGG 1 cut(s) 838
XapI RAATTY 3 cut(s) 305, 431, 446
XceI RCATGY 3 cut(s) 495, 501, 797
Zsp2I ATGCAT 1 cut(s) 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.