pycom15g37230

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
37111303 .. 37114237
2935 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g37230.1

Sequence Viewer

Length: 1191 bp
ATGGAACCCCAACCCACTCCCTGCAAATCAGACCACCACCACCAACACTCCAAATCCCTAGAATCTCCACCATCTTCCACCGCCACCTCCATTTCCACCCCAACCTGCTGCAAATGCGGAGCCCCAACCCCCATGGCCGCTCCCCCACCCTCCTTCTCCGACATCTCCCCCCCCCCAAACTACCGCCCAATCCGAGCTCCCGCCATCAACTTCCCTCCAAACCCTAACTCCCAACAGGCCATCATCCTCGCCCCTGTCCCACAGTCCCTCTCTGTCCCCCAAATCTCGCCTCCCTACCACTTCCAATCCCCCTCCAAAGTCATCCAGTCCCCCGACGATCTCCGCCGCTTCCACGACTCCTTCTCCGGCAAACACTTCGTCGGATTCATTGCCGCCCTCTCCGAGTCCATCCGCGCCAAGAAAATCTCCGACCCTTGTCACCAATCAGACGTCGTCAACACGATCGTCTCCATTCTCGAAACCCTAATTCAATGGGTCGACGAAATCCCACCCACCCAGCAAGCCGCCCGATATGGCAACGTTTCATTCCGCTCCTGGCACGAGCGGTTGTCCGAATCCAGCCACTCCCTCATGCTGCAGTTCCTCCCTGAGCATCTCCACCCTTCTACGATCGAGATCGTCCCCTATTTCACTGATAGCTTCGGGAACCCGAGTCGAATCGATTATGGTACTGGGCATGAGACCAACTTCACTGCTTGGCTCTACTGTCTGGCGAGAATGGGGGTGATTAAAGAAGAAGATTATCCGGCTGTCGTGGCTCGAGTTTTTGTCAAGTACTTGGACTTGATGAGGAAGCTGCAGTTGGTGTATTGCTTGGAGCCGGCGGGGTCTCACGGCGTTTGGGGCCTCGATGACTACCATTTCCTACCGTTTATTTTCGGGGCGTCGCAGTTGATCGGGCATAAGTATATGAAGCCTAAGTCAATTCACAACGATGATATCGTGGAGAATTTTTCGAAAGAGTATTTGTATCTTTCGTGCGTTAAGTTTGTGAAGAAGGTGAAGAAGGGTCCATTTTCGGAGCACTCACCGTTGTTGGATGATATCAGCGGAGTGCCTAATTGGAACAAAGTGAATAGTGGGTTGCTTAAGATGTATAAGGCTGAGGTGTTGGGGAAGGTTCCAATTATGCAGCATTTTCTGTTTGGCTGGCTCATCAAGTGGGAGTAG

Protein Analysis

397

Amino Acids

44.57

Weight (kDa)

7.3

Isoelectric Point (pI)

53.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTPA PF03095 104 - 395 8.8e-124 Phosphotyrosyl phosphate activator (PTPA) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 453
Acc36I ACCTGC 1 cut(s) 113
AccBSI CCGCTC 3 cut(s) 140, 552, 565
AccI GTMKAC 1 cut(s) 498
AccII CGCG 1 cut(s) 414
AclI AACGTT 1 cut(s) 540
AcoI YGGCCR 1 cut(s) 135
AcsI RAATTY 1 cut(s) 970
AcyI GRCGYC 2 cut(s) 450, 905
AfaI GTAC 2 cut(s) 691, 797
AflII CTTAAG 1 cut(s) 1109
AgsI TTSAA 1 cut(s) 491
AjnI CCWGG 1 cut(s) 554
AjuI GAANNNNNNNTTGG 2 cut(s) 806, 838
AluBI AGCT 3 cut(s) 197, 660, 817
AluI AGCT 3 cut(s) 197, 660, 817
Alw21I GWGCWC 2 cut(s) 199, 1047
Alw26I GTCTC 3 cut(s) 472, 695, 855
Ama87I CYCGRG 2 cut(s) 670, 780
AoxI GGCC 3 cut(s) 135, 237, 865
ApeKI GCWGC 4 cut(s) 108, 595, 817, 1153
ApoI RAATTY 1 cut(s) 970
ArsI GACNNNNNNTTYG 2 cut(s) 363, 395
AspLEI GCGC 1 cut(s) 416
AspS9I GGNCC 2 cut(s) 865, 1031
AsuHPI GGTGA 4 cut(s) 431, 757, 1033, 1041
AsuII TTCGAA 1 cut(s) 977
AvaI CYCGRG 2 cut(s) 670, 780
AvaII GGWCC 1 cut(s) 1031
BanII GRGCYC 2 cut(s) 124, 199
BauI CACGAG 1 cut(s) 560
Bbv12I GWGCWC 2 cut(s) 199, 1047
BbvCI CCTCAGC 1 cut(s) 1125
BbvI GCAGC 4 cut(s) 95, 582, 804, 1165
BccI CCATC 4 cut(s) 79, 212, 248, 416
BceAI ACGGC 1 cut(s) 871
BcgI CGANNNNNNTGC 2 cut(s) 358, 392
BciT130I CCWGG 1 cut(s) 556
BcoDI GTCTC 3 cut(s) 472, 695, 855
BfaI CTAG 1 cut(s) 59
BfmI CTRYAG 2 cut(s) 596, 818
BfrI CTTAAG 1 cut(s) 1109
BfuAI ACCTGC 1 cut(s) 113
BisI GCNGC 8 cut(s) 109, 138, 346, 393, 525, 596, 818, 1154
BlsI GCNGC 8 cut(s) 110, 139, 347, 394, 526, 597, 819, 1155
BmcAI AGTACT 1 cut(s) 797
Bme1390I CCNGG 1 cut(s) 556
Bme18I GGWCC 1 cut(s) 1031
BmeT110I CYCGRG 2 cut(s) 670, 780
BmgT120I GGNCC 2 cut(s) 865, 1031
BmiI GGNNCC 7 cut(s) 6, 121, 668, 840, 866, 1032, 1143
BmrFI CCNGG 1 cut(s) 556
BmrI ACTGGG 1 cut(s) 702
BmsI GCATC 1 cut(s) 622
BmuI ACTGGG 1 cut(s) 702
BoxI GACNNNNGTC 1 cut(s) 435
Bpu10I CCTNAGC 2 cut(s) 609, 1125
Bpu14I TTCGAA 1 cut(s) 977
Bsa29I ATCGAT 1 cut(s) 681
BsaBI GATNNNNATC 1 cut(s) 635
BsaHI GRCGYC 2 cut(s) 450, 905
BsaI GGTCTC 2 cut(s) 695, 855
BsaJI CCNNGG 1 cut(s) 132
BsaXI ACNNNNNCTCC 6 cut(s) 32, 62, 212, 242, 347, 377
Bse118I RCCGGY 1 cut(s) 841
Bse1I ACTGG 2 cut(s) 325, 697
Bse3DI GCAATG 1 cut(s) 387
Bse8I GATNNNNATC 1 cut(s) 635
BseBI CCWGG 1 cut(s) 556
BseCI ATCGAT 1 cut(s) 681
BseDI CCNNGG 1 cut(s) 132
BseGI GGATG 4 cut(s) 243, 321, 408, 1066
BseJI GATNNNNATC 1 cut(s) 635
BseMI GCAATG 1 cut(s) 387
BseMII CTCAG 2 cut(s) 600, 1116
BseNI ACTGG 2 cut(s) 325, 697
BseXI GCAGC 4 cut(s) 95, 582, 804, 1165
BseYI CCCAGC 1 cut(s) 516
Bsh1236I CGCG 1 cut(s) 414
Bsh1285I CGRYCG 2 cut(s) 465, 633
BshFI GGCC 3 cut(s) 137, 239, 867
BshVI ATCGAT 1 cut(s) 681
BsiEI CGRYCG 2 cut(s) 465, 633
BsiHKAI GWGCWC 2 cut(s) 199, 1047
BsiHKCI CYCGRG 2 cut(s) 670, 780
BsiSI CCGG 3 cut(s) 366, 767, 842
BslFI GGGAC 5 cut(s) 242, 250, 260, 313, 626
BsmAI GTCTC 3 cut(s) 472, 695, 855
BsmBI CGTCTC 1 cut(s) 472
BsmFI GGGAC 5 cut(s) 242, 250, 260, 313, 626
BsnI GGCC 3 cut(s) 137, 239, 867
Bso31I GGTCTC 2 cut(s) 695, 855
BsoBI CYCGRG 2 cut(s) 670, 780
Bsp119I TTCGAA 1 cut(s) 977
Bsp1286I GDGCHC 3 cut(s) 124, 199, 1047
Bsp143I GATC 5 cut(s) 337, 462, 630, 636, 915
Bsp19I CCATGG 1 cut(s) 132
BspANI GGCC 3 cut(s) 137, 239, 867
BspCNI CTCAG 2 cut(s) 601, 1117
BspDI ATCGAT 1 cut(s) 681
BspFNI CGCG 1 cut(s) 414
BspLI GGNNCC 7 cut(s) 6, 121, 668, 840, 866, 1032, 1143
BspMAI CTGCAG 2 cut(s) 600, 822
BspMI ACCTGC 1 cut(s) 113
BspT104I TTCGAA 1 cut(s) 977
BspTI CTTAAG 1 cut(s) 1109
BspTNI GGTCTC 2 cut(s) 695, 855
BsrBI CCGCTC 3 cut(s) 140, 552, 565
BsrDI GCAATG 1 cut(s) 387
BsrFI RCCGGY 1 cut(s) 841
BsrI ACTGG 2 cut(s) 325, 697
BssAI RCCGGY 1 cut(s) 841
BssECI CCNNGG 1 cut(s) 132
BssMI GATC 5 cut(s) 337, 462, 630, 636, 915
BssNI GRCGYC 2 cut(s) 450, 905
BssSI CACGAG 1 cut(s) 560
BssT1I CCWWGG 1 cut(s) 132
Bst2BI CACGAG 1 cut(s) 560
Bst2UI CCWGG 1 cut(s) 556
Bst4CI ACNGT 4 cut(s) 264, 728, 891, 1053
BstACI GRCGYC 2 cut(s) 450, 905
BstAFI CTTAAG 1 cut(s) 1109
BstBI TTCGAA 1 cut(s) 977
BstC8I GCNNGC 3 cut(s) 522, 843, 1172
BstDEI CTNAG 3 cut(s) 609, 939, 1125
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 4 cut(s) 243, 321, 408, 1066
BstFNI CGCG 1 cut(s) 414
BstHHI GCGC 1 cut(s) 416
BstKTI GATC 5 cut(s) 340, 465, 633, 639, 918
BstMAI GTCTC 3 cut(s) 472, 695, 855
BstMBI GATC 5 cut(s) 337, 462, 630, 636, 915
BstMCI CGRYCG 2 cut(s) 465, 633
BstMWI GCNNNNNNNGC 3 cut(s) 114, 776, 864
BstNI CCWGG 1 cut(s) 556
BstPAI GACNNNNGTC 1 cut(s) 435
BstSCI CCNGG 1 cut(s) 554
BstSFI CTRYAG 2 cut(s) 596, 818
BstUI CGCG 1 cut(s) 414
BstV1I GCAGC 4 cut(s) 95, 582, 804, 1165
Bsu15I ATCGAT 1 cut(s) 681
BsuRI GGCC 3 cut(s) 137, 239, 867
BsuTUI ATCGAT 1 cut(s) 681
BtgI CCRYGG 1 cut(s) 132
BtsCI GGATG 4 cut(s) 243, 321, 408, 1066
BtsI GCAGTG 1 cut(s) 711
BtsIMutI CAGTG 2 cut(s) 651, 711
BveI ACCTGC 1 cut(s) 113
Cac8I GCNNGC 3 cut(s) 522, 843, 1172
CfoI GCGC 1 cut(s) 416
Cfr10I RCCGGY 1 cut(s) 841
Cfr13I GGNCC 2 cut(s) 865, 1031
ClaI ATCGAT 1 cut(s) 681
CseI GACGC 1 cut(s) 894
Csp6I GTAC 2 cut(s) 690, 796
CviAII CATG 3 cut(s) 133, 592, 698
CviQI GTAC 2 cut(s) 690, 796
DdeI CTNAG 3 cut(s) 609, 939, 1125
DpnI GATC 5 cut(s) 339, 464, 632, 638, 917
DpnII GATC 5 cut(s) 337, 462, 630, 636, 915
EaeI YGGCCR 1 cut(s) 135
EciI GGCGGA 1 cut(s) 332
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 1 cut(s) 132
Eco24I GRGCYC 2 cut(s) 124, 199
Eco31I GGTCTC 2 cut(s) 695, 855
Eco32I GATATC 2 cut(s) 961, 1066
Eco47I GGWCC 1 cut(s) 1031
Eco53kI GAGCTC 1 cut(s) 197
Eco88I CYCGRG 2 cut(s) 670, 780
EcoICRI GAGCTC 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 865
EcoRII CCWGG 1 cut(s) 554
EcoRV GATATC 2 cut(s) 961, 1066
EcoT14I CCWWGG 1 cut(s) 132
EcoT38I GRGCYC 2 cut(s) 124, 199
ErhI CCWWGG 1 cut(s) 132
Esp3I CGTCTC 1 cut(s) 472
FaeI CATG 3 cut(s) 136, 595, 701
FaqI GGGAC 5 cut(s) 242, 250, 260, 313, 626
FatI CATG 3 cut(s) 132, 591, 697
FauI CCCGC 2 cut(s) 208, 838
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 8 cut(s) 109, 138, 346, 393, 525, 596, 818, 1154
FokI GGATG 4 cut(s) 230, 308, 395, 1073
FriOI GRGCYC 2 cut(s) 124, 199
Fsp4HI GCNGC 8 cut(s) 109, 138, 346, 393, 525, 596, 818, 1154
FspBI CTAG 1 cut(s) 59
GlaI GCGC 1 cut(s) 415
GluI GCNGC 8 cut(s) 109, 138, 346, 393, 525, 596, 818, 1154
GsaI CCCAGC 1 cut(s) 520
HaeIII GGCC 3 cut(s) 137, 239, 867
HapII CCGG 3 cut(s) 366, 767, 842
HgaI GACGC 1 cut(s) 894
HhaI GCGC 1 cut(s) 416
Hin1I GRCGYC 2 cut(s) 450, 905
Hin1II CATG 3 cut(s) 136, 595, 701
Hin6I GCGC 1 cut(s) 414
HinP1I GCGC 1 cut(s) 414
HincII GTYRAC 2 cut(s) 457, 499
HindII GTYRAC 2 cut(s) 457, 499
HinfI GANTC 7 cut(s) 62, 356, 384, 404, 575, 673, 678
HpaII CCGG 3 cut(s) 366, 767, 842
HphI GGTGA 4 cut(s) 431, 757, 1033, 1041
Hpy166II GTNNAC 2 cut(s) 457, 499
Hpy188I TCNGA 9 cut(s) 31, 160, 194, 383, 403, 430, 448, 574, 1042
Hpy188III TCNNGA 3 cut(s) 476, 634, 664
Hpy8I GTNNAC 2 cut(s) 457, 499
Hpy99I CGWCG 5 cut(s) 338, 383, 455, 503, 910
HpyAV CCTTC 6 cut(s) 163, 370, 633, 1012, 1021, 1132
HpyCH4III ACNGT 4 cut(s) 264, 728, 891, 1053
HpyCH4IV ACGT 2 cut(s) 450, 540
HpyCH4V TGCA 5 cut(s) 24, 111, 598, 820, 1153
HpyF10VI GCNNNNNNNGC 3 cut(s) 114, 776, 864
HpyF3I CTNAG 3 cut(s) 609, 939, 1125
HpySE526I ACGT 2 cut(s) 450, 540
Hsp92I GRCGYC 2 cut(s) 450, 905
Hsp92II CATG 3 cut(s) 136, 595, 701
HspAI GCGC 1 cut(s) 414
KroI GCCGGC 1 cut(s) 841
KroNI GCCGGC 1 cut(s) 843
Kzo9I GATC 5 cut(s) 337, 462, 630, 636, 915
LmnI GCTCC 6 cut(s) 119, 145, 202, 557, 838, 1042
Lsp1109I GCAGC 4 cut(s) 95, 582, 804, 1165
LweI GCATC 1 cut(s) 622
MaeI CTAG 1 cut(s) 59
MaeII ACGT 2 cut(s) 450, 540
MaeIII GTNAC 1 cut(s) 437
MalI GATC 5 cut(s) 339, 464, 632, 638, 917
MbiI CCGCTC 3 cut(s) 140, 552, 565
MboI GATC 5 cut(s) 337, 462, 630, 636, 915
MboII GAAGA 5 cut(s) 66, 767, 770, 1027, 1036
MhlI GDGCHC 3 cut(s) 124, 199, 1047
MluCI AATT 5 cut(s) 486, 945, 970, 1081, 1146
MlyI GAGTC 3 cut(s) 350, 413, 682
MmeI TCCRAC 4 cut(s) 183, 361, 453, 1038
MroNI GCCGGC 1 cut(s) 841
MseI TTAA 3 cut(s) 750, 1005, 1110
MslI CAYNNNNRTG 1 cut(s) 954
MspA1I CMGCKG 1 cut(s) 1071
MspCI CTTAAG 1 cut(s) 1109
MspI CCGG 3 cut(s) 366, 767, 842
MspR9I CCNGG 1 cut(s) 556
MvaI CCWGG 1 cut(s) 556
MvnI CGCG 1 cut(s) 414
MwoI GCNNNNNNNGC 3 cut(s) 114, 776, 864
NaeI GCCGGC 1 cut(s) 843
NcoI CCATGG 1 cut(s) 132
NdeII GATC 5 cut(s) 337, 462, 630, 636, 915
NgoMIV GCCGGC 1 cut(s) 841
NlaIII CATG 3 cut(s) 136, 595, 701
NlaIV GGNNCC 7 cut(s) 6, 121, 668, 840, 866, 1032, 1143
NmuCI GTSAC 1 cut(s) 437
NspV TTCGAA 1 cut(s) 977
PaeR7I CTCGAG 1 cut(s) 780
PcsI WCGNNNNNNNCGW 1 cut(s) 960
PdiI GCCGGC 1 cut(s) 843
PfeI GAWTC 4 cut(s) 62, 384, 575, 678
PflFI GACNNNGTC 1 cut(s) 452
PkrI GCNGC 8 cut(s) 110, 139, 347, 394, 526, 597, 819, 1155
Ple19I CGATCG 2 cut(s) 465, 633
PleI GAGTC 3 cut(s) 350, 412, 681
PpsI GAGTC 3 cut(s) 350, 412, 681
PshAI GACNNNNGTC 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 199
Psp1406I AACGTT 1 cut(s) 540
Psp6I CCWGG 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 516
PspGI CCWGG 1 cut(s) 554
PspN4I GGNNCC 7 cut(s) 6, 121, 668, 840, 866, 1032, 1143
PspPI GGNCC 2 cut(s) 865, 1031
PspXI VCTCGAGB 1 cut(s) 780
PstI CTGCAG 2 cut(s) 600, 822
PsyI GACNNNGTC 1 cut(s) 452
PvuI CGATCG 2 cut(s) 465, 633
RsaI GTAC 2 cut(s) 691, 797
RsaNI GTAC 2 cut(s) 690, 796
RseI CAYNNNNRTG 1 cut(s) 954
SacI GAGCTC 1 cut(s) 199
SalI GTCGAC 1 cut(s) 497
SaqAI TTAA 3 cut(s) 750, 1005, 1110
SatI GCNGC 8 cut(s) 109, 138, 346, 393, 525, 596, 818, 1154
Sau3AI GATC 5 cut(s) 337, 462, 630, 636, 915
Sau96I GGNCC 2 cut(s) 865, 1031
ScaI AGTACT 1 cut(s) 797
SchI GAGTC 3 cut(s) 350, 413, 682
ScrFI CCNGG 1 cut(s) 556
SduI GDGCHC 3 cut(s) 124, 199, 1047
SfaNI GCATC 1 cut(s) 622
SfcI CTRYAG 2 cut(s) 596, 818
Sfr274I CTCGAG 1 cut(s) 780
SfuI TTCGAA 1 cut(s) 977
SinI GGWCC 1 cut(s) 1031
SlaI CTCGAG 1 cut(s) 780
SmiMI CAYNNNNRTG 1 cut(s) 954
SmlI CTYRAG 2 cut(s) 780, 1109
SmoI CTYRAG 2 cut(s) 780, 1109
Sse9I AATT 5 cut(s) 486, 945, 970, 1081, 1146
SspMI CTAG 1 cut(s) 59
SstI GAGCTC 1 cut(s) 199
StyD4I CCNGG 1 cut(s) 554
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 4 cut(s) 264, 728, 891, 1053
TaiI ACGT 2 cut(s) 453, 543
TaqI TCGA 8 cut(s) 477, 498, 633, 676, 681, 781, 870, 977
TasI AATT 5 cut(s) 486, 945, 970, 1081, 1146
TatI WGTACW 1 cut(s) 795
TauI GCSGC 4 cut(s) 140, 348, 395, 527
TfiI GAWTC 4 cut(s) 62, 384, 575, 678
Tru1I TTAA 3 cut(s) 750, 1005, 1110
Tru9I TTAA 3 cut(s) 750, 1005, 1110
TscAI CASTG 2 cut(s) 658, 718
TseFI GTSAC 1 cut(s) 437
TseI GCWGC 4 cut(s) 108, 595, 817, 1153
Tsp45I GTSAC 1 cut(s) 437
TspDTI ATGAA 3 cut(s) 376, 534, 947
TspRI CASTG 2 cut(s) 658, 718
Tth111I GACNNNGTC 1 cut(s) 452
Vha464I CTTAAG 1 cut(s) 1109
VpaK11BI GGWCC 1 cut(s) 1031
XapI RAATTY 1 cut(s) 970
XhoI CTCGAG 1 cut(s) 780
XmiI GTMKAC 1 cut(s) 498
XspI CTAG 1 cut(s) 59
ZraI GACGTC 1 cut(s) 451
ZrmI AGTACT 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.