Rmu_sc0019965.1_g000001

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019965.1
Physical Location & Seq
Forward (+)
780 .. 1970
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019965.1_g000001.1.cds

Sequence Viewer

Length: 1191 bp
atggaacccgaagaacaccaccaccaccacccccaatcccccgaaaccccaccaccttccaccaccaccatttcgccgccggcctgctgcaaatgcggcgcccccaccgccttcgccgcccctccgccgtcgtgctcgccgcccccaaactaccgccccatccgagcccccgccatcaacctccccccaaacaacaactcccaacaagccatcatcctcgccccggtcccacaatccaagccggtcccaccaatctcccctcccttccgcttccaaaccccctccaagaaaatccagtcccccgacgacatccgccgcttccacgactccgattccggcaagcacttcctcggcttcgtcgtcgccctctcggaatccatccgcagcaagaaaatctccgatccctgccacgtgtcccccgtcaccgccgccatcgtctccgtcctcgagaccctccacaaatgggtcgacgaaatcccgccgactcagcaagccgcccgatacggcaacgtttcgtaccgcgtctggcacgaccgcttggtcgaaaatagccctgacctaatgctcaaattcctccctccgcatctcgaagcttccaccgtcgagatcgttccctatttcaccgacagcttcggaaaccctagccggatcgactacggcaccggccacgagaccaatttcgcggcgtggctatactgcctggcgagaatggaggtcattaaggaagaggactaccctgccgtggtggccagagtgttcgtcaagtacttggagctgatgaggaagctgcagctggtgtactgcttagagccggcggggtctcacggcgtttggggcctcgacgactaccatttcctgccgtttattttcggctcgtcgcagttgattgatcacaagtatatgaagccgaagtcgattcataatgatgatatattggagaacttttcgaaagagtatatgtatctttcggggattgctttcgtgaagaaggtgaagaaggggccgttttcggagcactcgcctttgttggatgatattagtggagtgccgaattggaagaaagttaatagtgggatgctgaagatgtataaggttgaggtgttggagaaggtaccaattatgcagcatttcctatttggctggctcatcaactggtatgctccttttacttgtctagatagctctatctaa

Protein Analysis

396

Amino Acids

44.69

Weight (kDa)

6.81

Isoelectric Point (pI)

60.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 539
Acc65I GGTACC 1 cut(s) 1111
AccB1I GGYRCC 3 cut(s) 98, 659, 1111
AccI GTMKAC 1 cut(s) 468
AccII CGCG 2 cut(s) 522, 683
AclI AACGTT 1 cut(s) 510
AclWI GGATC 2 cut(s) 395, 656
AcoI YGGCCR 2 cut(s) 664, 747
AcsI RAATTY 1 cut(s) 569
AcuI CTGAAG 1 cut(s) 1100
AcvI CACGTG 1 cut(s) 412
AcyI GRCGYC 1 cut(s) 99
AfaI GTAC 4 cut(s) 518, 767, 800, 1113
AfiI CCNNNNNNNGG 3 cut(s) 223, 463, 742
AflIII ACRYGT 1 cut(s) 411
AjnI CCWGG 1 cut(s) 699
AluBI AGCT 6 cut(s) 593, 630, 775, 787, 793, 1182
AluI AGCT 6 cut(s) 593, 630, 775, 787, 793, 1182
Alw21I GWGCWC 2 cut(s) 137, 1017
Alw26I GTCTC 4 cut(s) 442, 443, 665, 825
AlwI GGATC 2 cut(s) 395, 656
Ama87I CYCGRG 1 cut(s) 446
AoxI GGCC 5 cut(s) 81, 664, 747, 835, 1001
ApeKI GCWGC 5 cut(s) 87, 384, 787, 790, 1123
ApoI RAATTY 1 cut(s) 569
Asp718I GGTACC 1 cut(s) 1111
AspLEI GCGC 1 cut(s) 101
AspS9I GGNCC 4 cut(s) 226, 244, 835, 1001
AsuC2I CCSGG 1 cut(s) 224
AsuHPI GGTGA 3 cut(s) 415, 613, 1003
AsuII TTCGAA 1 cut(s) 947
AvaI CYCGRG 1 cut(s) 446
AvaII GGWCC 2 cut(s) 226, 244
BalI TGGCCA 1 cut(s) 749
BanI GGYRCC 3 cut(s) 98, 659, 1111
BanII GRGCYC 1 cut(s) 169
BauI CACGAG 1 cut(s) 668
BbrPI CACGTG 1 cut(s) 412
Bbv12I GWGCWC 2 cut(s) 137, 1017
BbvI GCAGC 5 cut(s) 74, 396, 774, 802, 1135
BccI CCATC 5 cut(s) 167, 182, 218, 386, 440
BceAI ACGGC 7 cut(s) 112, 520, 673, 725, 841, 844, 988
BciT130I CCWGG 1 cut(s) 701
BclI TGATCA 1 cut(s) 889
BcnI CCSGG 1 cut(s) 224
BcoDI GTCTC 4 cut(s) 442, 443, 665, 825
BfaI CTAG 2 cut(s) 642, 1175
BfmI CTRYAG 1 cut(s) 788
BfoI RGCGCY 1 cut(s) 102
BglI GCCNNNNNGGC 1 cut(s) 746
BmcAI AGTACT 1 cut(s) 767
Bme1390I CCNGG 2 cut(s) 224, 701
Bme18I GGWCC 2 cut(s) 226, 244
BmeT110I CYCGRG 1 cut(s) 446
BmgT120I GGNCC 4 cut(s) 226, 244, 835, 1001
BmiI GGNNCC 8 cut(s) 6, 100, 228, 246, 661, 836, 1002, 1113
BmrFI CCNGG 2 cut(s) 224, 701
BmsI GCATC 2 cut(s) 592, 1065
Bpu14I TTCGAA 1 cut(s) 947
BpuMI CCSGG 1 cut(s) 224
BsaAI YACGTR 1 cut(s) 412
BsaHI GRCGYC 1 cut(s) 99
BsaI GGTCTC 3 cut(s) 443, 665, 825
BsaJI CCNNGG 3 cut(s) 222, 349, 741
BsaXI ACNNNNNCTCC 2 cut(s) 182, 212
Bsc4I CCNNNNNNNGG 3 cut(s) 223, 463, 742
Bse118I RCCGGY 4 cut(s) 79, 241, 662, 811
Bse1I ACTGG 2 cut(s) 295, 1157
BseBI CCWGG 1 cut(s) 701
BseDI CCNNGG 3 cut(s) 222, 349, 741
BseGI GGATG 6 cut(s) 159, 213, 309, 378, 1036, 1080
BseLI CCNNNNNNNGG 3 cut(s) 223, 463, 742
BseMII CTCAG 1 cut(s) 500
BseNI ACTGG 2 cut(s) 295, 1157
BseXI GCAGC 5 cut(s) 74, 396, 774, 802, 1135
Bsh1236I CGCG 2 cut(s) 522, 683
Bsh1285I CGRYCG 1 cut(s) 535
BshFI GGCC 5 cut(s) 83, 666, 749, 837, 1003
BshNI GGYRCC 3 cut(s) 98, 659, 1111
BsiEI CGRYCG 1 cut(s) 535
BsiHKAI GWGCWC 2 cut(s) 137, 1017
BsiHKCI CYCGRG 1 cut(s) 446
BsiSI CCGG 7 cut(s) 80, 224, 242, 336, 646, 663, 812
BslFI GGGAC 4 cut(s) 212, 230, 283, 400
BslI CCNNNNNNNGG 3 cut(s) 223, 463, 742
BsmAI GTCTC 4 cut(s) 442, 443, 665, 825
BsmBI CGTCTC 1 cut(s) 442
BsmFI GGGAC 4 cut(s) 212, 230, 283, 400
BsnI GGCC 5 cut(s) 83, 666, 749, 837, 1003
Bso31I GGTCTC 3 cut(s) 443, 665, 825
BsoBI CYCGRG 1 cut(s) 446
Bsp119I TTCGAA 1 cut(s) 947
Bsp1286I GDGCHC 3 cut(s) 137, 169, 1017
Bsp143I GATC 4 cut(s) 400, 606, 648, 889
BspANI GGCC 5 cut(s) 83, 666, 749, 837, 1003
BspCNI CTCAG 1 cut(s) 499
BspFNI CGCG 2 cut(s) 522, 683
BspLI GGNNCC 8 cut(s) 6, 100, 228, 246, 661, 836, 1002, 1113
BspMAI CTGCAG 1 cut(s) 792
BspPI GGATC 2 cut(s) 395, 656
BspT104I TTCGAA 1 cut(s) 947
BspT107I GGYRCC 3 cut(s) 98, 659, 1111
BspTNI GGTCTC 3 cut(s) 443, 665, 825
BsrFI RCCGGY 4 cut(s) 79, 241, 662, 811
BsrI ACTGG 2 cut(s) 295, 1157
BssAI RCCGGY 4 cut(s) 79, 241, 662, 811
BssECI CCNNGG 3 cut(s) 222, 349, 741
BssMI GATC 4 cut(s) 400, 606, 648, 889
BssNI GRCGYC 1 cut(s) 99
BssSI CACGAG 1 cut(s) 668
Bst2BI CACGAG 1 cut(s) 668
Bst2UI CCWGG 1 cut(s) 701
Bst4CI ACNGT 1 cut(s) 601
Bst6I CTCTTC 1 cut(s) 720
BstACI GRCGYC 1 cut(s) 99
BstBAI YACGTR 1 cut(s) 412
BstBI TTCGAA 1 cut(s) 947
BstC8I GCNNGC 7 cut(s) 81, 85, 137, 341, 492, 813, 1142
BstDEI CTNAG 2 cut(s) 486, 805
BstDSI CCRYGG 1 cut(s) 741
BstF5I GGATG 6 cut(s) 159, 213, 309, 378, 1036, 1080
BstFNI CGCG 2 cut(s) 522, 683
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 1 cut(s) 101
BstKTI GATC 4 cut(s) 403, 609, 651, 892
BstMAI GTCTC 4 cut(s) 442, 443, 665, 825
BstMBI GATC 4 cut(s) 400, 606, 648, 889
BstMCI CGRYCG 1 cut(s) 535
BstMWI GCNNNNNNNGC 7 cut(s) 93, 96, 107, 116, 487, 746, 834
BstNI CCWGG 1 cut(s) 701
BstSCI CCNGG 2 cut(s) 222, 699
BstSFI CTRYAG 1 cut(s) 788
BstUI CGCG 2 cut(s) 522, 683
BstV1I GCAGC 5 cut(s) 74, 396, 774, 802, 1135
BsuRI GGCC 5 cut(s) 83, 666, 749, 837, 1003
BtgI CCRYGG 1 cut(s) 741
BtsCI GGATG 6 cut(s) 159, 213, 309, 378, 1036, 1080
Cac8I GCNNGC 7 cut(s) 81, 85, 137, 341, 492, 813, 1142
CfoI GCGC 1 cut(s) 101
Cfr10I RCCGGY 4 cut(s) 79, 241, 662, 811
Cfr13I GGNCC 4 cut(s) 226, 244, 835, 1001
CseI GACGC 1 cut(s) 511
Csp6I GTAC 4 cut(s) 517, 766, 799, 1112
CviQI GTAC 4 cut(s) 517, 766, 799, 1112
DdeI CTNAG 2 cut(s) 486, 805
DinI GGCGCC 1 cut(s) 100
DpnI GATC 4 cut(s) 402, 608, 650, 891
DpnII GATC 4 cut(s) 400, 606, 648, 889
DrdI GACNNNNNNGTC 1 cut(s) 539
DseDI GACNNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 2 cut(s) 664, 747
Eam1104I CTCTTC 1 cut(s) 720
EarI CTCTTC 1 cut(s) 720
EciI GGCGGA 2 cut(s) 114, 302
Eco24I GRGCYC 1 cut(s) 169
Eco31I GGTCTC 3 cut(s) 443, 665, 825
Eco47I GGWCC 2 cut(s) 226, 244
Eco57I CTGAAG 1 cut(s) 1100
Eco72I CACGTG 1 cut(s) 412
Eco88I CYCGRG 1 cut(s) 446
EcoO109I RGGNCCY 1 cut(s) 835
EcoRII CCWGG 1 cut(s) 699
EcoT38I GRGCYC 1 cut(s) 169
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
Esp3I CGTCTC 1 cut(s) 442
FaqI GGGAC 4 cut(s) 212, 230, 283, 400
FauI CCCGC 3 cut(s) 178, 486, 808
FbaI TGATCA 1 cut(s) 889
FblI GTMKAC 1 cut(s) 468
FokI GGATG 6 cut(s) 146, 200, 296, 365, 1043, 1087
FriOI GRGCYC 1 cut(s) 169
FspBI CTAG 2 cut(s) 642, 1175
GlaI GCGC 1 cut(s) 100
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 5 cut(s) 83, 666, 749, 837, 1003
HapII CCGG 7 cut(s) 80, 224, 242, 336, 646, 663, 812
HgaI GACGC 1 cut(s) 511
HhaI GCGC 1 cut(s) 101
Hin1I GRCGYC 1 cut(s) 99
Hin6I GCGC 1 cut(s) 99
HinP1I GCGC 1 cut(s) 99
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HindIII AAGCTT 1 cut(s) 591
HinfI GANTC 5 cut(s) 326, 332, 374, 484, 916
HpaII CCGG 7 cut(s) 80, 224, 242, 336, 646, 663, 812
HphI GGTGA 3 cut(s) 415, 613, 1003
Hpy166II GTNNAC 2 cut(s) 469, 799
Hpy188I TCNGA 6 cut(s) 164, 331, 373, 400, 635, 1012
Hpy188III TCNNGA 5 cut(s) 448, 587, 604, 982, 1175
Hpy8I GTNNAC 2 cut(s) 469, 799
Hpy99I CGWCG 8 cut(s) 133, 308, 362, 365, 473, 605, 845, 880
HpyAV CCTTC 6 cut(s) 66, 121, 274, 982, 991, 1102
HpyCH4III ACNGT 1 cut(s) 601
HpyCH4IV ACGT 2 cut(s) 411, 510
HpyCH4V TGCA 3 cut(s) 90, 790, 1123
HpyF10VI GCNNNNNNNGC 7 cut(s) 93, 96, 107, 116, 487, 746, 834
HpyF3I CTNAG 2 cut(s) 486, 805
HpySE526I ACGT 2 cut(s) 411, 510
Hsp92I GRCGYC 1 cut(s) 99
HspAI GCGC 1 cut(s) 99
KasI GGCGCC 1 cut(s) 98
KpnI GGTACC 1 cut(s) 1115
KroI GCCGGC 2 cut(s) 79, 811
KroNI GCCGGC 2 cut(s) 81, 813
Ksp22I TGATCA 1 cut(s) 889
Kzo9I GATC 4 cut(s) 400, 606, 648, 889
LmnI GCTCC 3 cut(s) 772, 1012, 1165
Lsp1109I GCAGC 5 cut(s) 74, 396, 774, 802, 1135
LweI GCATC 2 cut(s) 592, 1065
MaeI CTAG 2 cut(s) 642, 1175
MaeII ACGT 2 cut(s) 411, 510
MaeIII GTNAC 1 cut(s) 421
MalI GATC 4 cut(s) 402, 608, 650, 891
MboI GATC 4 cut(s) 400, 606, 648, 889
MboII GAAGA 6 cut(s) 23, 737, 997, 1006, 1069, 1093
MhlI GDGCHC 3 cut(s) 137, 169, 1017
MlsI TGGCCA 1 cut(s) 749
MluCI AATT 4 cut(s) 569, 676, 1051, 1116
MluNI TGGCCA 1 cut(s) 749
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 2 cut(s) 320, 478
MmeI TCCRAC 2 cut(s) 1008, 1083
Mox20I TGGCCA 1 cut(s) 749
MroNI GCCGGC 2 cut(s) 79, 811
MscI TGGCCA 1 cut(s) 749
MseI TTAA 2 cut(s) 720, 1065
MslI CAYNNNNRTG 1 cut(s) 924
Msp20I TGGCCA 1 cut(s) 749
MspA1I CMGCKG 1 cut(s) 793
MspI CCGG 7 cut(s) 80, 224, 242, 336, 646, 663, 812
MspR9I CCNGG 2 cut(s) 224, 701
MvaI CCWGG 1 cut(s) 701
MvnI CGCG 2 cut(s) 522, 683
MwoI GCNNNNNNNGC 7 cut(s) 93, 96, 107, 116, 487, 746, 834
NaeI GCCGGC 2 cut(s) 81, 813
NarI GGCGCC 1 cut(s) 99
NciI CCSGG 1 cut(s) 224
NdeII GATC 4 cut(s) 400, 606, 648, 889
NgoMIV GCCGGC 2 cut(s) 79, 811
NlaIV GGNNCC 8 cut(s) 6, 100, 228, 246, 661, 836, 1002, 1113
NmeAIII GCCGAG 1 cut(s) 330
NmuCI GTSAC 1 cut(s) 421
NspV TTCGAA 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 446
PcsI WCGNNNNNNNCGW 2 cut(s) 357, 417
PdiI GCCGGC 2 cut(s) 81, 813
PfeI GAWTC 3 cut(s) 332, 374, 916
PleI GAGTC 2 cut(s) 320, 478
PluTI GGCGCC 1 cut(s) 102
PmaCI CACGTG 1 cut(s) 412
PmlI CACGTG 1 cut(s) 412
PpsI GAGTC 2 cut(s) 320, 478
Ppu21I YACGTR 1 cut(s) 412
Psp1406I AACGTT 1 cut(s) 510
Psp6I CCWGG 1 cut(s) 699
PspCI CACGTG 1 cut(s) 412
PspGI CCWGG 1 cut(s) 699
PspN4I GGNNCC 8 cut(s) 6, 100, 228, 246, 661, 836, 1002, 1113
PspPI GGNCC 4 cut(s) 226, 244, 835, 1001
PstI CTGCAG 1 cut(s) 792
PvuII CAGCTG 1 cut(s) 793
RsaI GTAC 4 cut(s) 518, 767, 800, 1113
RsaNI GTAC 4 cut(s) 517, 766, 799, 1112
RseI CAYNNNNRTG 1 cut(s) 924
SalI GTCGAC 1 cut(s) 467
SaqAI TTAA 2 cut(s) 720, 1065
Sau3AI GATC 4 cut(s) 400, 606, 648, 889
Sau96I GGNCC 4 cut(s) 226, 244, 835, 1001
ScaI AGTACT 1 cut(s) 767
SchI GAGTC 2 cut(s) 320, 478
ScrFI CCNGG 2 cut(s) 224, 701
SduI GDGCHC 3 cut(s) 137, 169, 1017
SfaNI GCATC 2 cut(s) 592, 1065
SfcI CTRYAG 1 cut(s) 788
SfoI GGCGCC 1 cut(s) 100
Sfr274I CTCGAG 1 cut(s) 446
SfuI TTCGAA 1 cut(s) 947
SinI GGWCC 2 cut(s) 226, 244
SlaI CTCGAG 1 cut(s) 446
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 4 cut(s) 569, 676, 1051, 1116
SspDI GGCGCC 1 cut(s) 98
SspMI CTAG 2 cut(s) 642, 1175
StyD4I CCNGG 2 cut(s) 222, 699
TaaI ACNGT 1 cut(s) 601
TaiI ACGT 2 cut(s) 414, 513
TaqI TCGA 9 cut(s) 447, 468, 543, 588, 603, 651, 840, 914, 947
TasI AATT 4 cut(s) 569, 676, 1051, 1116
TatI WGTACW 2 cut(s) 765, 798
TauI GCSGC 8 cut(s) 79, 99, 119, 142, 318, 431, 497, 686
TfiI GAWTC 3 cut(s) 332, 374, 916
Tru1I TTAA 2 cut(s) 720, 1065
Tru9I TTAA 2 cut(s) 720, 1065
TseFI GTSAC 1 cut(s) 421
TseI GCWGC 5 cut(s) 87, 384, 787, 790, 1123
Tsp45I GTSAC 1 cut(s) 421
TspDTI ATGAA 2 cut(s) 908, 917
TspGWI ACGGA 1 cut(s) 430
VpaK11BI GGWCC 2 cut(s) 226, 244
XapI RAATTY 1 cut(s) 569
XbaI TCTAGA 1 cut(s) 1174
XhoI CTCGAG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 468
XspI CTAG 2 cut(s) 642, 1175
ZrmI AGTACT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.