pycom16g02600

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
1711493 .. 1711684
192 bp
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UTR
Exon/CDS
Intron
pycom16g02600.1

Sequence Viewer

Length: 192 bp
ATGCTGGTCCTACACCTGATGAACCACCAGCATACTTCTCACAAAAGAGTAGATGCTCCTGTTGAGTCATTTTCACAACATTCGTCACTAGTTCTCCATGCAACTCGGATCACAAGAAGGGAAGTGTCCGACAAAGAAACAAAGTTCAGCAAGAAAAACAGAGTCCTGAAGAAGGGAGGTTGGTGGAGGTAA

Protein Analysis

64

Amino Acids

7.46

Weight (kDa)

11.04

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 116
AcuI CTGAAG 1 cut(s) 188
AfiI CCNNNNNNNGG 1 cut(s) 172
AhlI ACTAGT 1 cut(s) 88
AlwI GGATC 1 cut(s) 116
AspS9I GGNCC 1 cut(s) 7
AvaII GGWCC 1 cut(s) 7
BcuI ACTAGT 1 cut(s) 88
BfaI CTAG 1 cut(s) 89
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 1 cut(s) 7
BmsI GCATC 1 cut(s) 43
BsaXI ACNNNNNCTCC 2 cut(s) 78, 108
Bsc4I CCNNNNNNNGG 1 cut(s) 172
BseLI CCNNNNNNNGG 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 172
Bsp143I GATC 1 cut(s) 108
BspPI GGATC 1 cut(s) 116
BssMI GATC 1 cut(s) 108
BstENI CCTNNNNNAGG 1 cut(s) 170
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
Cfr13I GGNCC 1 cut(s) 7
CviAII CATG 1 cut(s) 98
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 188
EcoNI CCTNNNNNAGG 1 cut(s) 170
FaeI CATG 1 cut(s) 101
FaiI YATR 2 cut(s) 33, 99
FatI CATG 1 cut(s) 97
FspBI CTAG 1 cut(s) 89
Hin1II CATG 1 cut(s) 101
HinfI GANTC 2 cut(s) 65, 162
Hpy188I TCNGA 2 cut(s) 108, 130
Hpy188III TCNNGA 1 cut(s) 166
HpyAV CCTTC 2 cut(s) 111, 166
HpyCH4V TGCA 1 cut(s) 101
Hsp92II CATG 1 cut(s) 101
Kzo9I GATC 1 cut(s) 108
LmnI GCTCC 1 cut(s) 61
LpnPI CCDG 4 cut(s) 29, 41, 72, 179
LweI GCATC 1 cut(s) 43
MaeI CTAG 1 cut(s) 89
MaeIII GTNAC 1 cut(s) 84
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MboII GAAGA 1 cut(s) 181
MlyI GAGTC 2 cut(s) 74, 171
MmeI TCCRAC 1 cut(s) 153
MnlI CCTC 2 cut(s) 170, 180
NdeII GATC 1 cut(s) 108
NlaIII CATG 1 cut(s) 101
NmuCI GTSAC 1 cut(s) 84
PleI GAGTC 2 cut(s) 73, 170
PpsI GAGTC 2 cut(s) 73, 170
PspPI GGNCC 1 cut(s) 7
Sau3AI GATC 1 cut(s) 108
Sau96I GGNCC 1 cut(s) 7
SchI GAGTC 2 cut(s) 74, 171
SetI ASST 3 cut(s) 18, 181, 191
SfaNI GCATC 1 cut(s) 43
SinI GGWCC 1 cut(s) 7
SpeI ACTAGT 1 cut(s) 88
SspMI CTAG 1 cut(s) 89
TseFI GTSAC 1 cut(s) 84
Tsp45I GTSAC 1 cut(s) 84
TspDTI ATGAA 1 cut(s) 35
VpaK11BI GGWCC 1 cut(s) 7
XagI CCTNNNNNAGG 1 cut(s) 170
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.