Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002749

Physical Location & Seq

Genomic Coordinates Reverse (-)

62857902 .. 62863014

Gene Structure 5113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40886

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGTCAGTGGGCTTTTATGTAAGGGCTTGTTTTAGTTTTGGTCCGACTCTGATGGTTCGGGCCGAGCGACCAAGTACTGCAGTAACCACTCTTATCCTCAAAGGGACACGCGTCGTTCATGCGAAAGGAAATTACGATTTCCTTGATACGGCATCGTTTTCAACACTCGGAATATCATCTTTTACTCTATTAAGCAGCAAAGCTCCTCCCTCGAGCTCCAGCTCTTGCTCTGGCAAAACAAAGAAGCCAACTGATTCTCTAAATATGGCTCAATTTGGCGGGAAAAAAGTGGGCCAGATGGTTTTGGGCTTTGGAGGCAACCCCTTGGGCCAGGCTCTGGCCGCAGTCGCCGCCGCTCTCCTGCTCCGCCTCTTCTCCGGCCCTGGCCCAGCCCTCTTGCCGGACTCAGAATTCGCCGAGGAAGACGACGACGACGACGTGATCAACGAAAAAGGCGAAACTCCGGTCGCCGGAAAAGTCGTTCCGGTTACAATCCGGTGGCGCAACATCACCTGCTCTCTCTCCGACAAATCTTCCATATCAGTCAGGTTTCTGCTGAATGACGTCAGCGGAGAAGCGAAACCGGGTAGGCTATTGGCGATAATGGGGCCGTCCGGGTCGGGAAAGACGACGCTGCTAAATGTACTCGCCGGTCAGCTAAGTGCTTCTCAAAAGTTGAGCTTATCGGGACTATTAGAGTTCAATGGAAATCCTGGCCCAAACAAAGCCTATAAGATTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCGCAGCTGACGGTGCGAGAGACGTTGTCTCTTGCCGCCGAGCTGCAACTTCCGGAGTTATCTTCCCCGGAAGCAAGATTGGATTATGTGAACAGTCTGTTGTTCAAAATGGGATTGGTTAGCTGTGCTGATACCAATGTTGGGGATGCAAAAGTCCGAGGAATTAGTGGGGGTGAAAAGAAACGTTTGTCTGTGGCTTGTGAGCTGATTGCAAGCCCCTCTGTTATATTTGCTGATGAACCGACTACTGGACTTGATGCCTTTCAGGCAGAGAAAGTTATGGAAACCCTTCGACAGCTTGTACAAGATGGACATACCGTTATTTGCTCCATACATCAGCCTAGGGGTTCTGTTTATGCTAAATTTGATGACATCGTGTTGCTAACTGAAGGTGCACTTGTGTATGCTGGTCCTGCACATGATGAACCACTGACATACTTTTCTAAATTCGGGTACCATTGCCCAGATCATGAGAACCCCGCTGAGTTTCTAGCTGATCTTATATCTGTTGACTACAGCTCTGCTGAAAGTGTCTACTCTTCTCAGAAAAGAATAGATGCTCTTGTTGAATCATTTTCACAACAATCATCACCAGTTCTGTATGCAACTCCGATTACATTAAGGGAAATCTCCAAGAACAGCACCAGGTTGAGCAGGAAGAGTAGAGTTCAGAAGAAGGGAGGTTGGTGGAGGCAATTCTGGTTGCTCCTAAGGCGTGCGTGGATGCAGGCTTCTCGTGATGGACCCACAAATAAAGTTCGGGCAAGAATGTCAGTTGCATCAGCTCTTATATTTGGGTCAGTTTTTTGGAGAATGGGTAGGTCGCAGACATCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCAATGGCGGCTCTGACAAAGACTGTCGGTGTGTTTCCAAAGGAGCGTGCAATAGTAAATAGAGAGCATGCAAAAGGGTCTTATACATTAGGACCCTATCTCCTTTCTAAGTTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTTCTGTTTTGTACCCCATGGCTCGTCTTCATCCTACTTTATCCAGATTTGGGAAGTTTTGTGGTATTGTGACCCTAGAATCTTTTGCGGCATCTGCTATGGGTCTCACAGTTGGTGCTATGGTTCCAACCACTGAAGCAGCTATGGCAGTGGGACCATCACTTATGACAGTTTTTCTTGTATTTGGAGGTTATTATGTGAATGCAAAGAATACACCAATTATCTTTCGTTGGATTCCTCATGCATCTCTAATCAGATGGGCTTTTCAAGGGCTCTGCACCAACGAGTTTCGCGGTCTTCAGTTTGAGCATCAACATTCTTTTGATATTCAAGATGGAGAACAGGCACTTGAACGCATCTCCTTTGGAGGAAGTCATATTAGGGAAACCGTGGTAGCTCAAAGTAGAATACTGTTGTTTTGGTATTGCACCACTTACCTACTGATGGAGAAAAACAAACCGAAATACCAGCAGCTGGAGGCTGCACCTCTTGAACAAACCCAACCAGCAGCACTGCAGCTTGGGCCAATAAATACCGAACAAGTTGAAGAACAAGACCAGTCAGATGAACCTGTAACACCCAAACAAGTTGAACTAGACCAGCCACTTGAATCACCTCCGATTGACCAAGACCCACCGTTTATCCTAGAAGGTGCTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031967 GO:0031975 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

821

Amino Acids

89.48

Weight (kDa)

7.56

Isoelectric Point (pI)

42.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	186 - 339	2.6e-24	ABC transporter
ABC2_membrane_7	PF19055	368 - 425	3.4e-06	ABC-2 type transporter
ABC2_membrane	PF01061	487 - 698	1.1e-48	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320
fragaria_vesca	FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200
malus_domestica	MD13G1027300.v1.1 MD16G1030400.v1.1
prunus_persica	Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1
pyrus_communis	pycom13g02600 pycom13g02610 pycom16g02600 pycom16g02640
rosa_chinensis	RchiOBHm_Chr4g0440941
rosa_laevigata	RLG00000006138 RLG00000036411
rosa_multiflora	Rmu_co8376807.1_g000001 Rmu_sc0000424.1_g000024 Rmu_sc0005054.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381800 Rroxscaffold_6G00425080
rosa_rugosa	Rorug04G0329400 Rorug04G0329500
rosa_samantha	Rh2AG107500 Rh4AG381300 Rh4BG394500 Rh4CG052700 Rh4CG409400 Rh4DG387800
rosa_wichuraiana	Rw4G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	521
AatII	GACGTC	1 cut(s)	567
Acc36I	ACCTGC	1 cut(s)	521
Acc65I	GGTACC	1 cut(s)	1221
AccB1I	GGYRCC	1 cut(s)	1221
AccB7I	CCANNNNNTGG	2 cut(s)	337, 2278
AccBSI	CCGCTC	1 cut(s)	356
AccI	GTMKAC	1 cut(s)	1302
AccII	CGCG	2 cut(s)	111, 2097
AccIII	TCCGGA	1 cut(s)	820
AclI	AACGTT	1 cut(s)	952
AclWI	GGATC	1 cut(s)	765
AcoI	YGGCCR	1 cut(s)	339
AcsI	RAATTY	3 cut(s)	410, 1130, 1214
AcuI	CTGAAG	4 cut(s)	1176, 1610, 1959, 2087
AcyI	GRCGYC	1 cut(s)	564
AfaI	GTAC	5 cut(s)	76, 645, 1071, 1223, 1817
AfiI	CCNNNNNNNGG	9 cut(s)	148, 337, 400, 470, 909, 1016, 1854, 2248, 2278
AflIII	ACRYGT	1 cut(s)	109
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	4 cut(s)	330, 382, 712, 1412
AloI	GAACNNNNNNTCC	2 cut(s)	465, 497
Alw21I	GWGCWC	2 cut(s)	218, 1165
Alw26I	GTCTC	4 cut(s)	742, 782, 801, 1913
Alw44I	GTGCAC	1 cut(s)	1161
AlwI	GGATC	1 cut(s)	765
AlwNI	CAGNNNCTG	2 cut(s)	337, 2278
Ama87I	CYCGRG	1 cut(s)	211
Aor13HI	TCCGGA	1 cut(s)	820
AoxI	GGCC	9 cut(s)	60, 292, 328, 339, 379, 385, 608, 715, 2327
ApaLI	GTGCAC	1 cut(s)	1161
ApoI	RAATTY	3 cut(s)	410, 1130, 1214
ArsI	GACNNNNNNTTYG	4 cut(s)	395, 427, 450, 482
AseI	ATTAAT	1 cut(s)	1796
Asp700I	GAANNNNTTC	1 cut(s)	1056
Asp718I	GGTACC	1 cut(s)	1221
AspA2I	CCTAGG	1 cut(s)	1109
AspLEI	GCGC	1 cut(s)	504
AsuC2I	CCSGG	3 cut(s)	585, 616, 836
AsuHPI	GGTGA	4 cut(s)	502, 953, 1350, 2409
AvaI	CYCGRG	1 cut(s)	211
AvaII	GGWCC	5 cut(s)	41, 1178, 1511, 1739, 1958
AvrII	CCTAGG	1 cut(s)	1109
AxyI	CCTNAGG	1 cut(s)	1478
BaeGI	GKGCMC	1 cut(s)	1165
BaeI	ACNNNNGTAYC	2 cut(s)	891, 924
BanI	GGYRCC	1 cut(s)	1221
BanII	GRGCYC	2 cut(s)	218, 2079
BauI	CACGAG	1 cut(s)	1503
BbsI	GAAGAC	3 cut(s)	429, 1823, 2093
Bbv12I	GWGCWC	2 cut(s)	218, 1165
BccI	CCATC	8 cut(s)	46, 292, 1070, 1502, 1969, 2055, 2132, 2242
BceAI	ACGGC	2 cut(s)	165, 595
BcgI	CGANNNNNNTGC	2 cut(s)	1484, 1518
BciT130I	CCWGG	4 cut(s)	332, 384, 714, 1414
BclI	TGATCA	1 cut(s)	441
BcnI	CCSGG	3 cut(s)	585, 616, 836
BcoDI	GTCTC	4 cut(s)	742, 782, 801, 1913
BfaI	CTAG	5 cut(s)	1110, 1259, 1880, 2399, 2450
BfmI	CTRYAG	3 cut(s)	78, 1282, 2318
BfuAI	ACCTGC	1 cut(s)	521
BglI	GCCNNNNNGGC	1 cut(s)	1034
BlnI	CCTAGG	1 cut(s)	1109
BmcAI	AGTACT	1 cut(s)	76
Bme1390I	CCNGG	7 cut(s)	332, 384, 585, 616, 714, 836, 1414
Bme18I	GGWCC	5 cut(s)	41, 1178, 1511, 1739, 1958
BmeT110I	CYCGRG	1 cut(s)	211
BmgBI	CACGTC	1 cut(s)	439
BmiI	GGNNCC	6 cut(s)	609, 1223, 1513, 1741, 1929, 1959
BmrFI	CCNGG	7 cut(s)	332, 384, 585, 616, 714, 836, 1414
BoxI	GACNNNNGTC	1 cut(s)	110
BpiI	GAAGAC	3 cut(s)	429, 1823, 2093
BpmI	CTGGAG	2 cut(s)	202, 2300
BpuMI	CCSGG	3 cut(s)	585, 616, 836
BsaHI	GRCGYC	1 cut(s)	564
BsaI	GGTCTC	1 cut(s)	1913
BsaJI	CCNNGG	8 cut(s)	324, 382, 417, 834, 925, 1109, 1821, 2193
BsaWI	WCCGGW	4 cut(s)	463, 484, 495, 820
BsaXI	ACNNNNNCTCC	6 cut(s)	746, 776, 1570, 1600, 1731, 1761
Bsc4I	CCNNNNNNNGG	9 cut(s)	148, 337, 400, 470, 909, 1016, 1854, 2248, 2278
Bse118I	RCCGGY	1 cut(s)	650
Bse1I	ACTGG	3 cut(s)	1021, 1361, 2362
Bse21I	CCTNAGG	1 cut(s)	1478
Bse3DI	GCAATG	2 cut(s)	1225, 1656
BseAI	TCCGGA	1 cut(s)	820
BseBI	CCWGG	4 cut(s)	332, 384, 714, 1414
BseDI	CCNNGG	8 cut(s)	324, 382, 417, 834, 925, 1109, 1821, 2193
BseGI	GGATG	3 cut(s)	919, 1497, 1834
BseLI	CCNNNNNNNGG	9 cut(s)	148, 337, 400, 470, 909, 1016, 1854, 2248, 2278
BseMI	GCAATG	2 cut(s)	1225, 1656
BseMII	CTCAG	4 cut(s)	420, 1242, 1325, 1758
BseNI	ACTGG	3 cut(s)	1021, 1361, 2362
BseRI	GAGGAG	1 cut(s)	195
BseSI	GKGCMC	1 cut(s)	1165
BseYI	CCCAGC	1 cut(s)	388
BsgI	GTGCAG	3 cut(s)	1167, 2065, 2271
Bsh1236I	CGCG	2 cut(s)	111, 2097
Bsh1285I	CGRYCG	1 cut(s)	468
BshFI	GGCC	9 cut(s)	62, 294, 330, 341, 381, 387, 610, 717, 2329
BshNI	GGYRCC	1 cut(s)	1221
BsiEI	CGRYCG	1 cut(s)	468
BsiHKAI	GWGCWC	2 cut(s)	218, 1165
BsiHKCI	CYCGRG	1 cut(s)	211
BslFI	GGGAC	3 cut(s)	118, 702, 1971
BslI	CCNNNNNNNGG	9 cut(s)	148, 337, 400, 470, 909, 1016, 1854, 2248, 2278
BsmAI	GTCTC	4 cut(s)	742, 782, 801, 1913
BsmBI	CGTCTC	1 cut(s)	782
BsmFI	GGGAC	3 cut(s)	118, 702, 1971
BsmI	GAATGC	1 cut(s)	2011
BsnI	GGCC	9 cut(s)	62, 294, 330, 341, 381, 387, 610, 717, 2329
Bso31I	GGTCTC	1 cut(s)	1913
BsoBI	CYCGRG	1 cut(s)	211
Bsp1286I	GDGCHC	3 cut(s)	218, 1165, 2079
Bsp13I	TCCGGA	1 cut(s)	820
Bsp1407I	TGTACA	1 cut(s)	1069
Bsp143I	GATC	4 cut(s)	441, 757, 1234, 1264
Bsp19I	CCATGG	1 cut(s)	1821
BspANI	GGCC	9 cut(s)	62, 294, 330, 341, 381, 387, 610, 717, 2329
BspCNI	CTCAG	4 cut(s)	419, 1243, 1324, 1759
BspEI	TCCGGA	1 cut(s)	820
BspFNI	CGCG	2 cut(s)	111, 2097
BspHI	TCATGA	1 cut(s)	1237
BspLI	GGNNCC	6 cut(s)	609, 1223, 1513, 1741, 1929, 1959
BspMAI	CTGCAG	2 cut(s)	82, 2322
BspMI	ACCTGC	1 cut(s)	521
BspPI	GGATC	1 cut(s)	765
BspT107I	GGYRCC	1 cut(s)	1221
BspTNI	GGTCTC	1 cut(s)	1913
BsrBI	CCGCTC	1 cut(s)	356
BsrDI	GCAATG	2 cut(s)	1225, 1656
BsrFI	RCCGGY	1 cut(s)	650
BsrGI	TGTACA	1 cut(s)	1069
BsrI	ACTGG	3 cut(s)	1021, 1361, 2362
BssAI	RCCGGY	1 cut(s)	650
BssECI	CCNNGG	8 cut(s)	324, 382, 417, 834, 925, 1109, 1821, 2193
BssMI	GATC	4 cut(s)	441, 757, 1234, 1264
BssNI	GRCGYC	1 cut(s)	564
BssSI	CACGAG	1 cut(s)	1503
BssT1I	CCWWGG	3 cut(s)	324, 1109, 1821
Bst2BI	CACGAG	1 cut(s)	1503
Bst2UI	CCWGG	4 cut(s)	332, 384, 714, 1414
Bst4CI	ACNGT	9 cut(s)	781, 863, 1087, 1672, 1915, 1975, 2194, 2217, 2442
Bst6I	CTCTTC	3 cut(s)	377, 1312, 1421
BstACI	GRCGYC	1 cut(s)	564
BstAUI	TGTACA	1 cut(s)	1069
BstC8I	GCNNGC	5 cut(s)	982, 1485, 1497, 1695, 1716
BstDEI	CTNAG	8 cut(s)	406, 659, 1251, 1311, 1478, 1755, 1767, 2460
BstDSI	CCRYGG	2 cut(s)	1821, 2193
BstF5I	GGATG	3 cut(s)	919, 1497, 1834
BstFNI	CGCG	2 cut(s)	111, 2097
BstHHI	GCGC	1 cut(s)	504
BstKTI	GATC	4 cut(s)	444, 760, 1237, 1267
BstMAI	GTCTC	4 cut(s)	742, 782, 801, 1913
BstMBI	GATC	4 cut(s)	441, 757, 1234, 1264
BstMCI	CGRYCG	1 cut(s)	468
BstNI	CCWGG	4 cut(s)	332, 384, 714, 1414
BstNSI	RCATGY	1 cut(s)	1718
BstPAI	GACNNNNGTC	1 cut(s)	110
BstSCI	CCNGG	7 cut(s)	330, 382, 583, 614, 712, 834, 1412
BstSFI	CTRYAG	3 cut(s)	78, 1282, 2318
BstSLI	GKGCMC	1 cut(s)	1165
BstUI	CGCG	2 cut(s)	111, 2097
BstV2I	GAAGAC	3 cut(s)	429, 1823, 2093
BstX2I	RGATCY	1 cut(s)	757
BstYI	RGATCY	1 cut(s)	757
Bsu36I	CCTNAGG	1 cut(s)	1478
BsuRI	GGCC	9 cut(s)	62, 294, 330, 341, 381, 387, 610, 717, 2329
BtgI	CCRYGG	2 cut(s)	1821, 2193
BtrI	CACGTC	1 cut(s)	439
BtsCI	GGATG	3 cut(s)	919, 1497, 1834
BtsI	GCAGTG	2 cut(s)	1959, 2315
BtsIMutI	CAGTG	5 cut(s)	12, 1196, 1935, 1959, 2315
BveI	ACCTGC	1 cut(s)	521
Cac8I	GCNNGC	5 cut(s)	982, 1485, 1497, 1695, 1716
CaiI	CAGNNNCTG	2 cut(s)	337, 2278
CciI	TCATGA	1 cut(s)	1237
CfoI	GCGC	1 cut(s)	504
Cfr10I	RCCGGY	1 cut(s)	650
CseI	GACGC	2 cut(s)	100, 640
CsiI	ACCWGGT	1 cut(s)	1412
Csp6I	GTAC	5 cut(s)	75, 644, 1070, 1222, 1816
CviAII	CATG	6 cut(s)	119, 1187, 1238, 1715, 1822, 2045
CviQI	GTAC	5 cut(s)	75, 644, 1070, 1222, 1816
DdeI	CTNAG	8 cut(s)	406, 659, 1251, 1311, 1478, 1755, 1767, 2460
DpnI	GATC	4 cut(s)	443, 759, 1236, 1266
DpnII	GATC	4 cut(s)	441, 757, 1234, 1264
EaeI	YGGCCR	1 cut(s)	339
Eam1104I	CTCTTC	3 cut(s)	377, 1312, 1421
EarI	CTCTTC	3 cut(s)	377, 1312, 1421
EciI	GGCGGA	1 cut(s)	356
Ecl136II	GAGCTC	1 cut(s)	216
Eco130I	CCWWGG	3 cut(s)	324, 1109, 1821
Eco24I	GRGCYC	2 cut(s)	218, 2079
Eco31I	GGTCTC	1 cut(s)	1913
Eco47I	GGWCC	5 cut(s)	41, 1178, 1511, 1739, 1958
Eco53kI	GAGCTC	1 cut(s)	216
Eco57I	CTGAAG	4 cut(s)	1176, 1610, 1959, 2087
Eco81I	CCTNAGG	1 cut(s)	1478
Eco88I	CYCGRG	1 cut(s)	211
EcoICRI	GAGCTC	1 cut(s)	216
EcoO109I	RGGNCCY	1 cut(s)	1739
EcoRI	GAATTC	1 cut(s)	410
EcoRII	CCWGG	4 cut(s)	330, 382, 712, 1412
EcoT14I	CCWWGG	3 cut(s)	324, 1109, 1821
EcoT22I	ATGCAT	1 cut(s)	2050
EcoT38I	GRGCYC	2 cut(s)	218, 2079
ErhI	CCWWGG	3 cut(s)	324, 1109, 1821
Esp3I	CGTCTC	1 cut(s)	782
FaeI	CATG	6 cut(s)	122, 1190, 1241, 1718, 1825, 2048
FalI	AAGNNNNNCTT	4 cut(s)	665, 697, 1149, 1181
FaqI	GGGAC	3 cut(s)	118, 702, 1971
FatI	CATG	6 cut(s)	118, 1186, 1237, 1714, 1821, 2044
FauI	CCCGC	2 cut(s)	272, 1255
FbaI	TGATCA	1 cut(s)	441
FblI	GTMKAC	1 cut(s)	1302
FokI	GGATG	3 cut(s)	926, 1504, 1821
FriOI	GRGCYC	2 cut(s)	218, 2079
FspBI	CTAG	5 cut(s)	1110, 1259, 1880, 2399, 2450
GlaI	GCGC	1 cut(s)	503
GsaI	CCCAGC	1 cut(s)	392
GsuI	CTGGAG	2 cut(s)	202, 2300
HaeIII	GGCC	9 cut(s)	62, 294, 330, 341, 381, 387, 610, 717, 2329
HgaI	GACGC	2 cut(s)	100, 640
HhaI	GCGC	1 cut(s)	504
Hin1I	GRCGYC	1 cut(s)	564
Hin1II	CATG	6 cut(s)	122, 1190, 1241, 1718, 1825, 2048
Hin6I	GCGC	1 cut(s)	502
HinP1I	GCGC	1 cut(s)	502
HincII	GTYRAC	1 cut(s)	1279
HindII	GTYRAC	1 cut(s)	1279
HinfI	GANTC	8 cut(s)	46, 254, 404, 1337, 1771, 1883, 2038, 2414
HphI	GGTGA	4 cut(s)	502, 953, 1350, 2409
Hpy166II	GTNNAC	4 cut(s)	859, 1163, 1279, 1303
Hpy188III	TCNNGA	8 cut(s)	621, 687, 821, 1238, 1505, 1848, 2135, 2294
Hpy8I	GTNNAC	4 cut(s)	859, 1163, 1279, 1303
Hpy99I	CGWCG	6 cut(s)	116, 431, 434, 437, 440, 634
HpyAV	CCTTC	4 cut(s)	1067, 1151, 1438, 2447
HpyCH4III	ACNGT	9 cut(s)	781, 863, 1087, 1672, 1915, 1975, 2194, 2217, 2442
HpyCH4IV	ACGT	4 cut(s)	438, 564, 791, 952
HpyF3I	CTNAG	8 cut(s)	406, 659, 1251, 1311, 1478, 1755, 1767, 2460
HpySE526I	ACGT	4 cut(s)	438, 564, 791, 952
Hsp92I	GRCGYC	1 cut(s)	564
Hsp92II	CATG	6 cut(s)	122, 1190, 1241, 1718, 1825, 2048
HspAI	GCGC	1 cut(s)	502
Kpn2I	TCCGGA	1 cut(s)	820
KpnI	GGTACC	1 cut(s)	1225
Ksp22I	TGATCA	1 cut(s)	441
Kzo9I	GATC	4 cut(s)	441, 757, 1234, 1264
LmnI	GCTCC	7 cut(s)	208, 221, 369, 1100, 1479, 1690, 1781
MabI	ACCWGGT	1 cut(s)	1412
MaeI	CTAG	5 cut(s)	1110, 1259, 1880, 2399, 2450
MaeII	ACGT	4 cut(s)	438, 564, 791, 952
MaeIII	GTNAC	4 cut(s)	82, 487, 1873, 2377
MalI	GATC	4 cut(s)	443, 759, 1236, 1266
MbiI	CCGCTC	1 cut(s)	356
MboI	GATC	4 cut(s)	441, 757, 1234, 1264
MflI	RGATCY	1 cut(s)	757
MhlI	GDGCHC	3 cut(s)	218, 1165, 2079
MluCI	AATT	8 cut(s)	130, 272, 410, 930, 1130, 1214, 1463, 2022
MluI	ACGCGT	1 cut(s)	109
MlyI	GAGTC	2 cut(s)	40, 398
MmeI	TCCRAC	4 cut(s)	68, 549, 1955, 2015
Mph1103I	ATGCAT	1 cut(s)	2050
MroI	TCCGGA	1 cut(s)	820
MroXI	GAANNNNTTC	1 cut(s)	1056
MseI	TTAA	3 cut(s)	191, 1388, 1796
MslI	CAYNNNNRTG	1 cut(s)	1649
MspA1I	CMGCKG	4 cut(s)	570, 775, 1250, 2278
MspR9I	CCNGG	7 cut(s)	332, 384, 585, 616, 714, 836, 1414
Mva1269I	GAATGC	1 cut(s)	2011
MvaI	CCWGG	4 cut(s)	332, 384, 714, 1414
MvnI	CGCG	2 cut(s)	111, 2097
NciI	CCSGG	3 cut(s)	585, 616, 836
NcoI	CCATGG	1 cut(s)	1821
NdeII	GATC	4 cut(s)	441, 757, 1234, 1264
NlaIII	CATG	6 cut(s)	122, 1190, 1241, 1718, 1825, 2048
NlaIV	GGNNCC	6 cut(s)	609, 1223, 1513, 1741, 1929, 1959
NmeAIII	GCCGAG	3 cut(s)	88, 442, 832
NmuCI	GTSAC	1 cut(s)	1873
NsiI	ATGCAT	1 cut(s)	2050
NspI	RCATGY	1 cut(s)	1718
PaeI	GCATGC	1 cut(s)	1718
PaeR7I	CTCGAG	1 cut(s)	211
PagI	TCATGA	1 cut(s)	1237
PaqCI	CACCTGC	1 cut(s)	521
PcsI	WCGNNNNNNNCGW	6 cut(s)	64, 432, 435, 444, 453, 626
PctI	GAATGC	1 cut(s)	2011
PdmI	GAANNNNTTC	1 cut(s)	1056
PfeI	GAWTC	6 cut(s)	254, 1337, 1771, 1883, 2038, 2414
PflFI	GACNNNGTC	1 cut(s)	793
PflMI	CCANNNNNTGG	2 cut(s)	337, 2278
PleI	GAGTC	2 cut(s)	40, 398
PpsI	GAGTC	2 cut(s)	40, 398
PpuMI	RGGWCCY	1 cut(s)	1739
PshAI	GACNNNNGTC	1 cut(s)	110
PshBI	ATTAAT	1 cut(s)	1796
Psp124BI	GAGCTC	1 cut(s)	218
Psp1406I	AACGTT	1 cut(s)	952
Psp5II	RGGWCCY	1 cut(s)	1739
Psp6I	CCWGG	4 cut(s)	330, 382, 712, 1412
PspFI	CCCAGC	1 cut(s)	388
PspGI	CCWGG	4 cut(s)	330, 382, 712, 1412
PspN4I	GGNNCC	6 cut(s)	609, 1223, 1513, 1741, 1929, 1959
PspPPI	RGGWCCY	1 cut(s)	1739
PspXI	VCTCGAGB	1 cut(s)	211
PstI	CTGCAG	2 cut(s)	82, 2322
PstNI	CAGNNNCTG	2 cut(s)	337, 2278
PsuI	RGATCY	1 cut(s)	757
PsyI	GACNNNGTC	1 cut(s)	793
PvuII	CAGCTG	2 cut(s)	775, 2278
RsaI	GTAC	5 cut(s)	76, 645, 1071, 1223, 1817
RsaNI	GTAC	5 cut(s)	75, 644, 1070, 1222, 1816
RseI	CAYNNNNRTG	1 cut(s)	1649
SacI	GAGCTC	1 cut(s)	218
SaqAI	TTAA	3 cut(s)	191, 1388, 1796
Sau3AI	GATC	4 cut(s)	441, 757, 1234, 1264
ScaI	AGTACT	1 cut(s)	76
SchI	GAGTC	2 cut(s)	40, 398
ScrFI	CCNGG	7 cut(s)	332, 384, 585, 616, 714, 836, 1414
SduI	GDGCHC	3 cut(s)	218, 1165, 2079
SexAI	ACCWGGT	1 cut(s)	1412
SfcI	CTRYAG	3 cut(s)	78, 1282, 2318
Sfr274I	CTCGAG	1 cut(s)	211
SinI	GGWCC	5 cut(s)	41, 1178, 1511, 1739, 1958
SlaI	CTCGAG	1 cut(s)	211
SmiMI	CAYNNNNRTG	1 cut(s)	1649
SmlI	CTYRAG	1 cut(s)	211
SmoI	CTYRAG	1 cut(s)	211
SphI	GCATGC	1 cut(s)	1718
Sse9I	AATT	8 cut(s)	130, 272, 410, 930, 1130, 1214, 1463, 2022
SspMI	CTAG	5 cut(s)	1110, 1259, 1880, 2399, 2450
SstI	GAGCTC	1 cut(s)	218
StyD4I	CCNGG	7 cut(s)	330, 382, 583, 614, 712, 834, 1412
StyI	CCWWGG	3 cut(s)	324, 1109, 1821
TaaI	ACNGT	9 cut(s)	781, 863, 1087, 1672, 1915, 1975, 2194, 2217, 2442
TaiI	ACGT	4 cut(s)	441, 567, 794, 955
TaqI	TCGA	2 cut(s)	212, 1060
TasI	AATT	8 cut(s)	130, 272, 410, 930, 1130, 1214, 1463, 2022
TatI	WGTACW	3 cut(s)	74, 643, 1069
TauI	GCSGC	6 cut(s)	344, 353, 356, 806, 1658, 1895
TfiI	GAWTC	6 cut(s)	254, 1337, 1771, 1883, 2038, 2414
Tru1I	TTAA	3 cut(s)	191, 1388, 1796
Tru9I	TTAA	3 cut(s)	191, 1388, 1796
TscAI	CASTG	5 cut(s)	12, 1203, 1942, 1959, 2322
TseFI	GTSAC	1 cut(s)	1873
Tsp45I	GTSAC	1 cut(s)	1873
TspDTI	ATGAA	5 cut(s)	107, 1020, 1206, 1823, 2385
TspRI	CASTG	5 cut(s)	12, 1203, 1942, 1959, 2322
Tth111I	GACNNNGTC	1 cut(s)	793
Van91I	CCANNNNNTGG	2 cut(s)	337, 2278
VneI	GTGCAC	1 cut(s)	1161
VpaK11BI	GGWCC	5 cut(s)	41, 1178, 1511, 1739, 1958
VspI	ATTAAT	1 cut(s)	1796
XapI	RAATTY	3 cut(s)	410, 1130, 1214
XceI	RCATGY	1 cut(s)	1718
XhoI	CTCGAG	1 cut(s)	211
XmaJI	CCTAGG	1 cut(s)	1109
XmiI	GTMKAC	1 cut(s)	1302
XmnI	GAANNNNTTC	1 cut(s)	1056
XspI	CTAG	5 cut(s)	1110, 1259, 1880, 2399, 2450
ZraI	GACGTC	1 cut(s)	565
ZrmI	AGTACT	1 cut(s)	76
Zsp2I	ATGCAT	1 cut(s)	2050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.