Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002749

Physical Location & Seq

Genomic Coordinates Forward (+)

4711866 .. 4716244

Gene Structure 4379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006138

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGCTCAATTTGGCGGGAAAAAAGTGGGCCAGATGGTTTTGGGCTTTGGAGGCAGCCCCTTGGGCCAGGCTCTGGCCGCCGTCGCCGCCGCTCTCCTGCTCCGCCTCTTCTCCGGCCCTGGCCCAGCCCTCTTGCCGGACTCAGAATTCGCCGAGGAAGACGACGTGATCAACGAAAAAGGCGAAACTCCGGTCGCCGGAAAAGTCGTTCCGGTTACAATCCGGTGGCGCAACATCACCTGCTCTCTCTCCGACAAATCTTCCAAATCAGTCAGGTTTCTGCTGAATGACGTCAGCGGAGAAGCGAAACCGGGGAGGCTATTGGCGATAATGGGGCCGTCCGGGTCTGGAAAGACGACGCTGCTAAATGTACTCGCCGGTCAGCTAAGTGCTTCTCAAAAGTTGAGCTTATCGGGACTATTAGAGTTCAATGGAAATCCTGGCCCAAACAAAGCCTATAAGATTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCGCAGCTGACGGTGCGAGAGACGTTGTCTCTTGCCGCCGAGCTGCAACTTCCGGAGTTATCTTCCCCGGAAGAAAGATTGGAGTATGTGAACAATCTGTTGTTCAAAATGGGATTGGTCAGCTGTGCTGATACTAATGTTGGGGATGTGAAAGTCCGAGGAATTAGTGGGGGTGAAAAGAAACGTTTGTCTGTGGCTTGTGAGCTGATTGCAAGCCCCTCTGTTATATTTGCTGATGAACCAACTACTGGACTTGATGCCTTTCAGGCAGAGAAAGTCATGGAAACCCTTCGACAGCTTGCACAAGATGGACATACCGTTATTTGCTCCATACATCAGCCTAGGGGTTCTGTTTATGCTAAATTTGATGACATCGTGTTGCTAACCGAAGGTGCACTTGTGTATGCTGGTCCTGCACATGACGAACCACTGACATACTTTTCTAAATTCGGGTACCATTGCCCAGATCATGAGAACCCCGCTGAGTTTCTCGCTGATCTTATATCTGTTGACTACAGCTCTGCTGAAAGTGTCTACTCTTCTCAGAAAAGAATAGATGCTCTTGTTGAATCATTTTCACAACAATCATCACCAGTTCTGTATGCAACTCCGATTACGTTAAGTGAAATCTCCAAGAACAGCACCAGGTTGAGCAGGAAGAGTAGAGTTCAGAAGAAGGGAGGTTGGTGGAGGCAATTCTGGTTGCTCCTAAGGCGTGCGTGGATGCAGGCTTCTCGTGATGGACCCACAAATAAAGTTCGGGCAAGAATGTCAGTTGCATCAGCTCTTATATTTGGGTCAGTTTTTTGGAGAATGGGTAGGTCGCAGACATCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCAATGGCGGCTCTGACAAAGACTGTCGGTGTGTTTCCAAAGGAGCGTGCAATAGTAAATAGAGAGCATGCAAAAGGGTCTTATACATTAGGACCCTATCTCCTTTCTAAGTTGTTGGCTGAGATTCCCATTGGAGCAGCATTCCCATTAATGTTTGGTTATGTTTTGTACCCCATGGCTCGTCTTCATCCTACTTTATCCAGATTTGGGAAGTTTTGTGGTATTGTGACCCTAGAATCTTTTGCGGCATCTGCTATGGGTCTCACAGTTGGTGCTATGGTTCCAACCACTGAAGCAGCTATGGCAGTGGGACCATCACTTATGACAGTTTTTCTTGTATTTGGAGGTTATTATGTGAATGCAAAGAATACACCAATTATCTTTCGTTGGATTCCTCATGCATCTCTAATCAGATGGGCTTTTCAAGGGCTCTGCATCAACGAGTTTCGCGGTCTTCAGTTTGAGCATCAACATTCTTTTGATATTCAAGATGGAGAACAGGCACTTGAACGCATCTCCTTTGGAGGAAGTCATATTAGGGAAACCGTGGTAGCTCAAAGTAGAATACTGTTGTTTTGGTATTGCACCACTTACCTACTGATGGAGAAAAACAAACCGAAATACCAGCAGCTGGAGGCCGCACCTCTTGAACAAACCCAACCAGCAGCACTGCAGCTTGGGCCAATAAATACCGAACAAGTTGAAGAACAAGACCAGTCAGATGAACCTGTAACACCCAAACAAGTTGAACTAGACCAGCCACTTGAATCACCTCCGATTGACCAAGACCCACCATTTATCCTAGAAGGTGCTAACTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031967 GO:0031975 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

732

Amino Acids

80.03

Weight (kDa)

6.32

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	95 - 248	2.4e-24	ABC transporter
ABC2_membrane_7	PF19055	277 - 334	2.6e-06	ABC-2 type transporter
ABC2_membrane	PF01061	396 - 607	2.4e-48	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320
fragaria_vesca	FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200
malus_domestica	MD13G1027300.v1.1 MD16G1030400.v1.1
prunus_persica	Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1
pyrus_communis	pycom13g02600 pycom13g02610 pycom16g02600 pycom16g02640
rosa_chinensis	RchiOBHm_Chr4g0440941
rosa_laevigata	RLG00000006138 RLG00000036411
rosa_multiflora	Rmu_co8376807.1_g000001 Rmu_sc0000424.1_g000024 Rmu_sc0005054.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381800 Rroxscaffold_6G00425080
rosa_rugosa	Rorug04G0329400 Rorug04G0329500
rosa_samantha	Rh2AG107500 Rh4AG381300 Rh4BG394500 Rh4CG052700 Rh4CG409400 Rh4DG387800
rosa_wichuraiana	Rw4G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	248
AatII	GACGTC	1 cut(s)	294
Acc36I	ACCTGC	1 cut(s)	248
Acc65I	GGTACC	1 cut(s)	948
AccB1I	GGYRCC	1 cut(s)	948
AccB7I	CCANNNNNTGG	3 cut(s)	73, 743, 2005
AccBSI	CCGCTC	1 cut(s)	92
AccI	GTMKAC	1 cut(s)	1029
AccII	CGCG	1 cut(s)	1824
AccIII	TCCGGA	1 cut(s)	547
AclI	AACGTT	1 cut(s)	679
AclWI	GGATC	1 cut(s)	492
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	3 cut(s)	146, 857, 941
AcuI	CTGAAG	3 cut(s)	1337, 1686, 1814
AcyI	GRCGYC	1 cut(s)	291
AfaI	GTAC	3 cut(s)	372, 950, 1544
AfiI	CCNNNNNNNGG	7 cut(s)	73, 136, 197, 743, 1581, 1975, 2005
AjiI	CACGTC	1 cut(s)	166
AjnI	CCWGG	4 cut(s)	66, 118, 439, 1139
AloI	GAACNNNNNNTCC	2 cut(s)	192, 224
Alw21I	GWGCWC	1 cut(s)	892
Alw26I	GTCTC	4 cut(s)	469, 509, 528, 1640
Alw44I	GTGCAC	1 cut(s)	888
AlwI	GGATC	1 cut(s)	492
AlwNI	CAGNNNCTG	2 cut(s)	73, 2005
Aor13HI	TCCGGA	1 cut(s)	547
AoxI	GGCC	9 cut(s)	28, 64, 75, 115, 121, 335, 442, 2010, 2054
ApaLI	GTGCAC	1 cut(s)	888
ApoI	RAATTY	3 cut(s)	146, 857, 941
ArsI	GACNNNNNNTTYG	4 cut(s)	131, 163, 177, 209
AseI	ATTAAT	1 cut(s)	1523
Asp700I	GAANNNNTTC	1 cut(s)	783
Asp718I	GGTACC	1 cut(s)	948
AspA2I	CCTAGG	1 cut(s)	836
AspLEI	GCGC	1 cut(s)	231
AsuC2I	CCSGG	3 cut(s)	312, 343, 563
AsuHPI	GGTGA	4 cut(s)	229, 680, 1077, 2136
AvaII	GGWCC	4 cut(s)	905, 1238, 1466, 1685
AvrII	CCTAGG	1 cut(s)	836
AxyI	CCTNAGG	1 cut(s)	1205
BaeGI	GKGCMC	1 cut(s)	892
BaeI	ACNNNNGTAYC	2 cut(s)	618, 651
BanI	GGYRCC	1 cut(s)	948
BanII	GRGCYC	1 cut(s)	1806
BauI	CACGAG	1 cut(s)	1230
BbsI	GAAGAC	3 cut(s)	165, 1550, 1820
Bbv12I	GWGCWC	1 cut(s)	892
BccI	CCATC	7 cut(s)	28, 797, 1229, 1696, 1782, 1859, 1969
BceAI	ACGGC	2 cut(s)	65, 322
BcgI	CGANNNNNNTGC	2 cut(s)	1211, 1245
BciT130I	CCWGG	4 cut(s)	68, 120, 441, 1141
BclI	TGATCA	1 cut(s)	168
BcnI	CCSGG	3 cut(s)	312, 343, 563
BcoDI	GTCTC	4 cut(s)	469, 509, 528, 1640
BfaI	CTAG	4 cut(s)	837, 1607, 2126, 2177
BfmI	CTRYAG	2 cut(s)	1009, 2045
BfuAI	ACCTGC	1 cut(s)	248
BglI	GCCNNNNNGGC	2 cut(s)	63, 761
BlnI	CCTAGG	1 cut(s)	836
Bme1390I	CCNGG	7 cut(s)	68, 120, 312, 343, 441, 563, 1141
Bme18I	GGWCC	4 cut(s)	905, 1238, 1466, 1685
BmgBI	CACGTC	1 cut(s)	166
BmiI	GGNNCC	6 cut(s)	336, 950, 1240, 1468, 1656, 1686
BmrFI	CCNGG	7 cut(s)	68, 120, 312, 343, 441, 563, 1141
BmsI	GCATC	9 cut(s)	742, 1042, 1209, 1283, 1631, 1784, 1818, 1849, 1896
BpiI	GAAGAC	3 cut(s)	165, 1550, 1820
BpmI	CTGGAG	1 cut(s)	2027
BpuMI	CCSGG	3 cut(s)	312, 343, 563
BsaHI	GRCGYC	1 cut(s)	291
BsaI	GGTCTC	1 cut(s)	1640
BsaJI	CCNNGG	9 cut(s)	60, 118, 153, 311, 561, 652, 836, 1548, 1920
BsaWI	WCCGGW	4 cut(s)	190, 211, 222, 547
BsaXI	ACNNNNNCTCC	6 cut(s)	473, 503, 1297, 1327, 1458, 1488
Bsc4I	CCNNNNNNNGG	7 cut(s)	73, 136, 197, 743, 1581, 1975, 2005
Bse118I	RCCGGY	1 cut(s)	377
Bse1I	ACTGG	3 cut(s)	748, 1088, 2089
Bse21I	CCTNAGG	1 cut(s)	1205
Bse3DI	GCAATG	2 cut(s)	952, 1383
BseAI	TCCGGA	1 cut(s)	547
BseBI	CCWGG	4 cut(s)	68, 120, 441, 1141
BseDI	CCNNGG	9 cut(s)	60, 118, 153, 311, 561, 652, 836, 1548, 1920
BseGI	GGATG	3 cut(s)	646, 1224, 1561
BseLI	CCNNNNNNNGG	7 cut(s)	73, 136, 197, 743, 1581, 1975, 2005
BseMI	GCAATG	2 cut(s)	952, 1383
BseMII	CTCAG	4 cut(s)	156, 969, 1052, 1485
BseNI	ACTGG	3 cut(s)	748, 1088, 2089
BseSI	GKGCMC	1 cut(s)	892
BseYI	CCCAGC	1 cut(s)	124
BsgI	GTGCAG	1 cut(s)	894
Bsh1236I	CGCG	1 cut(s)	1824
Bsh1285I	CGRYCG	1 cut(s)	195
BshFI	GGCC	9 cut(s)	30, 66, 77, 117, 123, 337, 444, 2012, 2056
BshNI	GGYRCC	1 cut(s)	948
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	1 cut(s)	892
BslFI	GGGAC	2 cut(s)	429, 1698
BslI	CCNNNNNNNGG	7 cut(s)	73, 136, 197, 743, 1581, 1975, 2005
BsmAI	GTCTC	4 cut(s)	469, 509, 528, 1640
BsmBI	CGTCTC	1 cut(s)	509
BsmFI	GGGAC	2 cut(s)	429, 1698
BsmI	GAATGC	2 cut(s)	1514, 1738
BsnI	GGCC	9 cut(s)	30, 66, 77, 117, 123, 337, 444, 2012, 2056
Bso31I	GGTCTC	1 cut(s)	1640
Bsp1286I	GDGCHC	2 cut(s)	892, 1806
Bsp13I	TCCGGA	1 cut(s)	547
Bsp143I	GATC	4 cut(s)	168, 484, 961, 991
Bsp19I	CCATGG	1 cut(s)	1548
BspANI	GGCC	9 cut(s)	30, 66, 77, 117, 123, 337, 444, 2012, 2056
BspCNI	CTCAG	4 cut(s)	155, 970, 1051, 1486
BspEI	TCCGGA	1 cut(s)	547
BspFNI	CGCG	1 cut(s)	1824
BspHI	TCATGA	1 cut(s)	964
BspLI	GGNNCC	6 cut(s)	336, 950, 1240, 1468, 1656, 1686
BspMAI	CTGCAG	1 cut(s)	2049
BspMI	ACCTGC	1 cut(s)	248
BspPI	GGATC	1 cut(s)	492
BspT107I	GGYRCC	1 cut(s)	948
BspTNI	GGTCTC	1 cut(s)	1640
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	2 cut(s)	952, 1383
BsrFI	RCCGGY	1 cut(s)	377
BsrI	ACTGG	3 cut(s)	748, 1088, 2089
BssAI	RCCGGY	1 cut(s)	377
BssECI	CCNNGG	9 cut(s)	60, 118, 153, 311, 561, 652, 836, 1548, 1920
BssMI	GATC	4 cut(s)	168, 484, 961, 991
BssNI	GRCGYC	1 cut(s)	291
BssSI	CACGAG	1 cut(s)	1230
BssT1I	CCWWGG	3 cut(s)	60, 836, 1548
Bst2BI	CACGAG	1 cut(s)	1230
Bst2UI	CCWGG	4 cut(s)	68, 120, 441, 1141
Bst4CI	ACNGT	7 cut(s)	508, 814, 1399, 1642, 1702, 1921, 1944
Bst6I	CTCTTC	3 cut(s)	113, 1039, 1148
BstACI	GRCGYC	1 cut(s)	291
BstC8I	GCNNGC	6 cut(s)	709, 795, 1212, 1224, 1422, 1443
BstDEI	CTNAG	7 cut(s)	142, 386, 978, 1038, 1205, 1482, 1494
BstDSI	CCRYGG	2 cut(s)	1548, 1920
BstF5I	GGATG	3 cut(s)	646, 1224, 1561
BstFNI	CGCG	1 cut(s)	1824
BstHHI	GCGC	1 cut(s)	231
BstKTI	GATC	4 cut(s)	171, 487, 964, 994
BstMAI	GTCTC	4 cut(s)	469, 509, 528, 1640
BstMBI	GATC	4 cut(s)	168, 484, 961, 991
BstMCI	CGRYCG	1 cut(s)	195
BstNI	CCWGG	4 cut(s)	68, 120, 441, 1141
BstNSI	RCATGY	1 cut(s)	1445
BstSCI	CCNGG	7 cut(s)	66, 118, 310, 341, 439, 561, 1139
BstSFI	CTRYAG	2 cut(s)	1009, 2045
BstSLI	GKGCMC	1 cut(s)	892
BstUI	CGCG	1 cut(s)	1824
BstV2I	GAAGAC	3 cut(s)	165, 1550, 1820
BstX2I	RGATCY	1 cut(s)	484
BstYI	RGATCY	1 cut(s)	484
Bsu36I	CCTNAGG	1 cut(s)	1205
BsuRI	GGCC	9 cut(s)	30, 66, 77, 117, 123, 337, 444, 2012, 2056
BtgI	CCRYGG	2 cut(s)	1548, 1920
BtrI	CACGTC	1 cut(s)	166
BtsCI	GGATG	3 cut(s)	646, 1224, 1561
BtsI	GCAGTG	2 cut(s)	1686, 2042
BtsIMutI	CAGTG	4 cut(s)	923, 1662, 1686, 2042
BveI	ACCTGC	1 cut(s)	248
Cac8I	GCNNGC	6 cut(s)	709, 795, 1212, 1224, 1422, 1443
CaiI	CAGNNNCTG	2 cut(s)	73, 2005
CciI	TCATGA	1 cut(s)	964
CfoI	GCGC	1 cut(s)	231
Cfr10I	RCCGGY	1 cut(s)	377
CseI	GACGC	1 cut(s)	367
CsiI	ACCWGGT	1 cut(s)	1139
Csp6I	GTAC	3 cut(s)	371, 949, 1543
CviAII	CATG	6 cut(s)	775, 914, 965, 1442, 1549, 1772
CviQI	GTAC	3 cut(s)	371, 949, 1543
DdeI	CTNAG	7 cut(s)	142, 386, 978, 1038, 1205, 1482, 1494
DpnI	GATC	4 cut(s)	170, 486, 963, 993
DpnII	GATC	4 cut(s)	168, 484, 961, 991
EaeI	YGGCCR	1 cut(s)	75
Eam1104I	CTCTTC	3 cut(s)	113, 1039, 1148
EarI	CTCTTC	3 cut(s)	113, 1039, 1148
EciI	GGCGGA	1 cut(s)	92
Eco130I	CCWWGG	3 cut(s)	60, 836, 1548
Eco24I	GRGCYC	1 cut(s)	1806
Eco31I	GGTCTC	1 cut(s)	1640
Eco47I	GGWCC	4 cut(s)	905, 1238, 1466, 1685
Eco57I	CTGAAG	3 cut(s)	1337, 1686, 1814
Eco81I	CCTNAGG	1 cut(s)	1205
EcoO109I	RGGNCCY	1 cut(s)	1466
EcoRI	GAATTC	1 cut(s)	146
EcoRII	CCWGG	4 cut(s)	66, 118, 439, 1139
EcoT14I	CCWWGG	3 cut(s)	60, 836, 1548
EcoT22I	ATGCAT	1 cut(s)	1777
EcoT38I	GRGCYC	1 cut(s)	1806
ErhI	CCWWGG	3 cut(s)	60, 836, 1548
Esp3I	CGTCTC	1 cut(s)	509
FaeI	CATG	6 cut(s)	778, 917, 968, 1445, 1552, 1775
FalI	AAGNNNNNCTT	4 cut(s)	392, 424, 876, 908
FaqI	GGGAC	2 cut(s)	429, 1698
FatI	CATG	6 cut(s)	774, 913, 964, 1441, 1548, 1771
FauI	CCCGC	2 cut(s)	8, 982
FbaI	TGATCA	1 cut(s)	168
FblI	GTMKAC	1 cut(s)	1029
FokI	GGATG	3 cut(s)	653, 1231, 1548
FriOI	GRGCYC	1 cut(s)	1806
FspBI	CTAG	4 cut(s)	837, 1607, 2126, 2177
GlaI	GCGC	1 cut(s)	230
GsaI	CCCAGC	1 cut(s)	128
GsuI	CTGGAG	1 cut(s)	2027
HaeIII	GGCC	9 cut(s)	30, 66, 77, 117, 123, 337, 444, 2012, 2056
HgaI	GACGC	1 cut(s)	367
HhaI	GCGC	1 cut(s)	231
Hin1I	GRCGYC	1 cut(s)	291
Hin1II	CATG	6 cut(s)	778, 917, 968, 1445, 1552, 1775
Hin6I	GCGC	1 cut(s)	229
HinP1I	GCGC	1 cut(s)	229
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HinfI	GANTC	6 cut(s)	140, 1064, 1498, 1610, 1765, 2141
HphI	GGTGA	4 cut(s)	229, 680, 1077, 2136
Hpy166II	GTNNAC	4 cut(s)	586, 890, 1006, 1030
Hpy188III	TCNNGA	8 cut(s)	348, 414, 548, 965, 1232, 1575, 1862, 2021
Hpy8I	GTNNAC	4 cut(s)	586, 890, 1006, 1030
Hpy99I	CGWCG	3 cut(s)	86, 167, 361
HpyAV	CCTTC	4 cut(s)	794, 878, 1165, 2174
HpyCH4III	ACNGT	7 cut(s)	508, 814, 1399, 1642, 1702, 1921, 1944
HpyCH4IV	ACGT	5 cut(s)	165, 291, 518, 679, 1112
HpyF3I	CTNAG	7 cut(s)	142, 386, 978, 1038, 1205, 1482, 1494
HpySE526I	ACGT	5 cut(s)	165, 291, 518, 679, 1112
Hsp92I	GRCGYC	1 cut(s)	291
Hsp92II	CATG	6 cut(s)	778, 917, 968, 1445, 1552, 1775
HspAI	GCGC	1 cut(s)	229
Kpn2I	TCCGGA	1 cut(s)	547
KpnI	GGTACC	1 cut(s)	952
Ksp22I	TGATCA	1 cut(s)	168
Kzo9I	GATC	4 cut(s)	168, 484, 961, 991
LmnI	GCTCC	5 cut(s)	105, 827, 1206, 1417, 1508
LweI	GCATC	9 cut(s)	742, 1042, 1209, 1283, 1631, 1784, 1818, 1849, 1896
MabI	ACCWGGT	1 cut(s)	1139
MaeI	CTAG	4 cut(s)	837, 1607, 2126, 2177
MaeII	ACGT	5 cut(s)	165, 291, 518, 679, 1112
MaeIII	GTNAC	3 cut(s)	214, 1600, 2104
MalI	GATC	4 cut(s)	170, 486, 963, 993
MbiI	CCGCTC	1 cut(s)	92
MboI	GATC	4 cut(s)	168, 484, 961, 991
MflI	RGATCY	1 cut(s)	484
MhlI	GDGCHC	2 cut(s)	892, 1806
MluCI	AATT	7 cut(s)	8, 146, 657, 857, 941, 1190, 1749
MlyI	GAGTC	1 cut(s)	134
MmeI	TCCRAC	3 cut(s)	276, 1682, 1742
Mph1103I	ATGCAT	1 cut(s)	1777
MroI	TCCGGA	1 cut(s)	547
MroXI	GAANNNNTTC	1 cut(s)	783
MseI	TTAA	2 cut(s)	1115, 1523
MslI	CAYNNNNRTG	1 cut(s)	1376
MspA1I	CMGCKG	5 cut(s)	297, 502, 618, 977, 2005
MspR9I	CCNGG	7 cut(s)	68, 120, 312, 343, 441, 563, 1141
Mva1269I	GAATGC	2 cut(s)	1514, 1738
MvaI	CCWGG	4 cut(s)	68, 120, 441, 1141
MvnI	CGCG	1 cut(s)	1824
NciI	CCSGG	3 cut(s)	312, 343, 563
NcoI	CCATGG	1 cut(s)	1548
NdeII	GATC	4 cut(s)	168, 484, 961, 991
NlaIII	CATG	6 cut(s)	778, 917, 968, 1445, 1552, 1775
NlaIV	GGNNCC	6 cut(s)	336, 950, 1240, 1468, 1656, 1686
NmeAIII	GCCGAG	2 cut(s)	178, 559
NmuCI	GTSAC	1 cut(s)	1600
NsiI	ATGCAT	1 cut(s)	1777
NspI	RCATGY	1 cut(s)	1445
PaeI	GCATGC	1 cut(s)	1445
PagI	TCATGA	1 cut(s)	964
PaqCI	CACCTGC	1 cut(s)	248
PcsI	WCGNNNNNNNCGW	2 cut(s)	171, 180
PctI	GAATGC	2 cut(s)	1514, 1738
PdmI	GAANNNNTTC	1 cut(s)	783
PfeI	GAWTC	5 cut(s)	1064, 1498, 1610, 1765, 2141
PflFI	GACNNNGTC	1 cut(s)	520
PflMI	CCANNNNNTGG	3 cut(s)	73, 743, 2005
PleI	GAGTC	1 cut(s)	134
PpsI	GAGTC	1 cut(s)	134
PpuMI	RGGWCCY	1 cut(s)	1466
PshBI	ATTAAT	1 cut(s)	1523
Psp1406I	AACGTT	1 cut(s)	679
Psp5II	RGGWCCY	1 cut(s)	1466
Psp6I	CCWGG	4 cut(s)	66, 118, 439, 1139
PspFI	CCCAGC	1 cut(s)	124
PspGI	CCWGG	4 cut(s)	66, 118, 439, 1139
PspN4I	GGNNCC	6 cut(s)	336, 950, 1240, 1468, 1656, 1686
PspPPI	RGGWCCY	1 cut(s)	1466
PstI	CTGCAG	1 cut(s)	2049
PstNI	CAGNNNCTG	2 cut(s)	73, 2005
PsuI	RGATCY	1 cut(s)	484
PsyI	GACNNNGTC	1 cut(s)	520
PvuII	CAGCTG	3 cut(s)	502, 618, 2005
RsaI	GTAC	3 cut(s)	372, 950, 1544
RsaNI	GTAC	3 cut(s)	371, 949, 1543
RseI	CAYNNNNRTG	1 cut(s)	1376
SaqAI	TTAA	2 cut(s)	1115, 1523
Sau3AI	GATC	4 cut(s)	168, 484, 961, 991
SchI	GAGTC	1 cut(s)	134
ScrFI	CCNGG	7 cut(s)	68, 120, 312, 343, 441, 563, 1141
SduI	GDGCHC	2 cut(s)	892, 1806
SexAI	ACCWGGT	1 cut(s)	1139
SfaNI	GCATC	9 cut(s)	742, 1042, 1209, 1283, 1631, 1784, 1818, 1849, 1896
SfcI	CTRYAG	2 cut(s)	1009, 2045
SinI	GGWCC	4 cut(s)	905, 1238, 1466, 1685
SmiMI	CAYNNNNRTG	1 cut(s)	1376
SphI	GCATGC	1 cut(s)	1445
Sse9I	AATT	7 cut(s)	8, 146, 657, 857, 941, 1190, 1749
SspMI	CTAG	4 cut(s)	837, 1607, 2126, 2177
StyD4I	CCNGG	7 cut(s)	66, 118, 310, 341, 439, 561, 1139
StyI	CCWWGG	3 cut(s)	60, 836, 1548
TaaI	ACNGT	7 cut(s)	508, 814, 1399, 1642, 1702, 1921, 1944
TaiI	ACGT	5 cut(s)	168, 294, 521, 682, 1115
TaqI	TCGA	1 cut(s)	787
TasI	AATT	7 cut(s)	8, 146, 657, 857, 941, 1190, 1749
TatI	WGTACW	1 cut(s)	370
TauI	GCSGC	7 cut(s)	80, 89, 92, 533, 1385, 1622, 2015
TfiI	GAWTC	5 cut(s)	1064, 1498, 1610, 1765, 2141
Tru1I	TTAA	2 cut(s)	1115, 1523
Tru9I	TTAA	2 cut(s)	1115, 1523
TscAI	CASTG	4 cut(s)	930, 1669, 1686, 2049
TseFI	GTSAC	1 cut(s)	1600
Tsp45I	GTSAC	1 cut(s)	1600
TspDTI	ATGAA	3 cut(s)	747, 1550, 2112
TspRI	CASTG	4 cut(s)	930, 1669, 1686, 2049
Tth111I	GACNNNGTC	1 cut(s)	520
Van91I	CCANNNNNTGG	3 cut(s)	73, 743, 2005
VneI	GTGCAC	1 cut(s)	888
VpaK11BI	GGWCC	4 cut(s)	905, 1238, 1466, 1685
VspI	ATTAAT	1 cut(s)	1523
XapI	RAATTY	3 cut(s)	146, 857, 941
XceI	RCATGY	1 cut(s)	1445
XmaJI	CCTAGG	1 cut(s)	836
XmiI	GTMKAC	1 cut(s)	1029
XmnI	GAANNNNTTC	1 cut(s)	783
XspI	CTAG	4 cut(s)	837, 1607, 2126, 2177
ZraI	GACGTC	1 cut(s)	292
Zsp2I	ATGCAT	1 cut(s)	1777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.