Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002749

Physical Location & Seq

Genomic Coordinates Reverse (-)

61660832 .. 61668529

Gene Structure 7698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00381800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGTGGGGTCCACCGCGGCTAGCTGACATGGCACGACCGGACTCGTCGCAATGTTGCGGCGCGGTGAGCGCACGGTTTTTTTTGAGGGCGAGTAGCGCCGCTATCAAGTCCCTTTCCGGAGAGTCTATTGGTCCAAATGTGGATTACACTTTACACGTAACTTTTGAAGAAGTTGAACCATTCCCGATCAGTATATTGCATATTTGCTGCTCTGGCCGCCCTCGTTCCGGTTACAATCCGGTCAGGTTTCTGCTGAATGACGTCAGCGGAGAAGCGAAGCCGGGGAGGCTATTGGCGATAATGGGGCCGTCGGGGTCGGGAAAGACGACGCTGCTAAATGTACTCGCCGGTCAGCTAAGTGCTTCTCAAAAGTTGAGCTTATCGGGACTATTAGAGTTCAATGGAAATCCTGGCCCAAACAAAGCCTATAAGATTGCTTATGTGAGACAGGAGGATCTGTTTTTCTCGCAGCTGACGGTGCGAGAGACGTTGTCTCTTGCCGCCGAGCTGCAACTTCCGGAGTTATCTTCCCTGGAAGCAAGATTGGAGTATGTGAACAGTCTGTTGTTCAAAATGGGACTGGTCAGCTGTGCTGATACCAATATTGGGGATGTGAAAGTCCGAGGAATTAGTGGGGGTGAAAAGAAACGTTTGTCTGTGGCTTGTGAGCTGATTGCAAGCCCCTCTGTTATATTTGCTGATGAACCGACTACTGGACTTGATGCCTTTCAGGCAGAGAAAGTTATGGAAACCCTTCGACAGCTTGCACAAGATGGACATACCGTTATTTGCTCCATACATCAGCCTAGGGGTTCTGTTTATGCTAAATTTGATGACATCGTGTTGCTAACCGAAGGTGCACTTGTGTATGCTGGTCCTGCACATGATGAACCACTGACATACTTTTCTAAATTCGGGTACCATTGCCCAGATCATGAGAACCCTGCTGAGTTTCTAGCTGATCTTATATCTGTTGACTACAGCTCTGCTGAAGGTGTCTACTCTTCTCAGAAAAGAATAGATGCTCTTGTTGAATCATTTTCACAACAATCATCACCAGTTCTGTATGCAACTCCGATTACATTAAGGGAAATCTCCAAGAACAGCACCAGGTTGAGCAGGAAGAGTAAAGTTCAGAAGAAGGGAGGTTGGTGGAGGCAATTCTGGTTGCTCCTAAGGCGTGCATGGATGCAGGCTTCTCGTGATGGACCCACAAATAAAGTTCGGGCAAGAATGTCAGTTGCATCAGCTCTTATATTTGGGTCAGTTTTTGGAGAATGGGTAGTTTCAAACCTCTCAGTTGTATTTATGGATATTCTCTGTCAGGTTGCTGCAATAAACACAGCAATGGCGGCTCTGACAAAGACTGTCGGTGTGTTTCCAAAGGAGCGTGCAATAGTAAATAGAGAGCATGCAAAAGGGTCTTATACATTAGGACCCTATCTCCTTTCTAAGTTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTTCTGTTTTGTACCCCATGGCTCGTCTTCATCCTACTTTATCCAGATTTGGGAAGTTTTGTGGTATTGTGACCCTAGAATCTTTTGCGGCATCTGCTATGGGTCTCACAGTTGGTGCTATGGTTCCAACCACTGAAGCAGCTATGGCAGTGGGACCATCACTTATGACAGTTTTTCTTGTATTTGGAGGTTATTATGTGAATGCAAAGAATACACCAATTATCTTTCGTTGGATTCCTCATGCATCTCTAATCAGATGGGCTTTTCAAGGGCTCTGCATCAACGAGTTTCGCGGTCTTCAGTTTGAGCATCAACATTCTTTTGATATTCAAGATGGAGAACAGGCACTTGAACGCATCTCCTTTGGAGGAAGTCATATTAGGGAAACCGTGGTAGCTCAAAGTAGAATACTGTTGTTTTGGTATTGCACCACTTACCTACTGATGGAGAAAAACAAACCGAAATACCAGCAGCTGGAGGCCGCACCTCTTGAACAAACCCAACCAGCAGCACTGCAGCTTGGGCCAATAAATACCGAACAAGTTGAAGAACAAGACCAGTCAGATGAACCTTTAACACCCAAACAAGTTGAACTAGACCAGCCACTTGAATCACCTCCGATTGACCAAGACCCACCATTTATCCTAGAAGGTGCTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031967 GO:0031975 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

720

Amino Acids

79.07

Weight (kDa)

6.28

Isoelectric Point (pI)

39.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	85 - 238	5.1e-24	ABC transporter
ABC2_membrane_7	PF19055	267 - 324	2.3e-06	ABC-2 type transporter
ABC2_membrane	PF01061	386 - 597	1.1e-42	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320 AT2G01320
fragaria_vesca	FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200 FvH4_4g32200
malus_domestica	MD13G1027300.v1.1 MD16G1030400.v1.1
prunus_persica	Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1 Prupe.1G322600_v2.0.a1
pyrus_communis	pycom13g02600 pycom13g02610 pycom16g02600 pycom16g02640
rosa_chinensis	RchiOBHm_Chr4g0440941
rosa_laevigata	RLG00000006138 RLG00000036411
rosa_multiflora	Rmu_co8376807.1_g000001 Rmu_sc0000424.1_g000024 Rmu_sc0005054.1_g000001
rosa_roxburghii	Rroxscaffold_5G00381800 Rroxscaffold_6G00425080
rosa_rugosa	Rorug04G0329400 Rorug04G0329500
rosa_samantha	Rh2AG107500 Rh4AG381300 Rh4BG394500 Rh4CG052700 Rh4CG409400 Rh4DG387800
rosa_wichuraiana	Rw4G032840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	264
Acc65I	GGTACC	1 cut(s)	918
AccB1I	GGYRCC	1 cut(s)	918
AccB7I	CCANNNNNTGG	1 cut(s)	1975
AccI	GTMKAC	1 cut(s)	999
AccII	CGCG	3 cut(s)	16, 62, 1794
AccIII	TCCGGA	2 cut(s)	116, 517
AclI	AACGTT	1 cut(s)	649
AclWI	GGATC	1 cut(s)	462
AcoI	YGGCCR	1 cut(s)	214
AcsI	RAATTY	2 cut(s)	827, 911
AcuI	CTGAAG	3 cut(s)	1011, 1656, 1784
AcyI	GRCGYC	1 cut(s)	261
AfaI	GTAC	3 cut(s)	342, 920, 1514
AfiI	CCNNNNNNNGG	6 cut(s)	227, 606, 713, 1551, 1945, 1975
AflIII	ACRYGT	1 cut(s)	154
AjnI	CCWGG	3 cut(s)	409, 531, 1109
Alw21I	GWGCWC	1 cut(s)	862
Alw26I	GTCTC	4 cut(s)	439, 479, 498, 1610
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	1 cut(s)	462
AlwNI	CAGNNNCTG	1 cut(s)	1975
Aor13HI	TCCGGA	2 cut(s)	116, 517
AoxI	GGCC	5 cut(s)	214, 305, 412, 1980, 2024
ApaLI	GTGCAC	1 cut(s)	858
ApoI	RAATTY	2 cut(s)	827, 911
AseI	ATTAAT	1 cut(s)	1493
Asp700I	GAANNNNTTC	1 cut(s)	753
Asp718I	GGTACC	1 cut(s)	918
AspA2I	CCTAGG	1 cut(s)	806
AspLEI	GCGC	3 cut(s)	62, 71, 98
AspS9I	GGNCC	9 cut(s)	8, 131, 305, 413, 875, 1208, 1436, 1655, 2024
AsuC2I	CCSGG	1 cut(s)	282
AsuHPI	GGTGA	4 cut(s)	76, 650, 1047, 2106
AsuNHI	GCTAGC	1 cut(s)	19
AvaII	GGWCC	6 cut(s)	8, 131, 875, 1208, 1436, 1655
AvrII	CCTAGG	1 cut(s)	806
AxyI	CCTNAGG	1 cut(s)	1175
BaeGI	GKGCMC	1 cut(s)	862
BanI	GGYRCC	1 cut(s)	918
BanII	GRGCYC	1 cut(s)	1776
BauI	CACGAG	1 cut(s)	1200
BbsI	GAAGAC	2 cut(s)	1520, 1790
Bbv12I	GWGCWC	1 cut(s)	862
BccI	CCATC	6 cut(s)	767, 1199, 1666, 1752, 1829, 1939
BceAI	ACGGC	1 cut(s)	292
BcgI	CGANNNNNNTGC	2 cut(s)	1181, 1215
BciT130I	CCWGG	3 cut(s)	411, 533, 1111
BcnI	CCSGG	1 cut(s)	282
BcoDI	GTCTC	4 cut(s)	439, 479, 498, 1610
BfaI	CTAG	6 cut(s)	20, 807, 956, 1577, 2096, 2147
BfmI	CTRYAG	2 cut(s)	979, 2015
BfoI	RGCGCY	1 cut(s)	99
BglI	GCCNNNNNGGC	2 cut(s)	286, 731
BlnI	CCTAGG	1 cut(s)	806
Bme1390I	CCNGG	4 cut(s)	282, 411, 533, 1111
Bme18I	GGWCC	6 cut(s)	8, 131, 875, 1208, 1436, 1655
BmgT120I	GGNCC	9 cut(s)	8, 131, 305, 413, 875, 1208, 1436, 1655, 2024
BmiI	GGNNCC	7 cut(s)	9, 306, 920, 1210, 1438, 1626, 1656
BmrFI	CCNGG	4 cut(s)	282, 411, 533, 1111
BmsI	GCATC	9 cut(s)	712, 1012, 1179, 1253, 1601, 1754, 1788, 1819, 1866
BmtI	GCTAGC	1 cut(s)	23
BpiI	GAAGAC	2 cut(s)	1520, 1790
BpmI	CTGGAG	1 cut(s)	1997
BpuMI	CCSGG	1 cut(s)	282
BsaAI	YACGTR	1 cut(s)	157
BsaHI	GRCGYC	1 cut(s)	261
BsaI	GGTCTC	1 cut(s)	1610
BsaJI	CCNNGG	7 cut(s)	14, 281, 531, 622, 806, 1518, 1890
BsaWI	WCCGGW	5 cut(s)	37, 116, 227, 238, 517
BsaXI	ACNNNNNCTCC	6 cut(s)	443, 473, 1266, 1296, 1428, 1458
Bsc4I	CCNNNNNNNGG	6 cut(s)	227, 606, 713, 1551, 1945, 1975
Bse118I	RCCGGY	1 cut(s)	347
Bse1I	ACTGG	4 cut(s)	585, 718, 1058, 2059
Bse21I	CCTNAGG	1 cut(s)	1175
Bse3DI	GCAATG	3 cut(s)	56, 922, 1353
BseAI	TCCGGA	2 cut(s)	116, 517
BseBI	CCWGG	3 cut(s)	411, 533, 1111
BseDI	CCNNGG	7 cut(s)	14, 281, 531, 622, 806, 1518, 1890
BseGI	GGATG	3 cut(s)	616, 1194, 1531
BseLI	CCNNNNNNNGG	6 cut(s)	227, 606, 713, 1551, 1945, 1975
BseMI	GCAATG	3 cut(s)	56, 922, 1353
BseMII	CTCAG	4 cut(s)	939, 1022, 1311, 1455
BseNI	ACTGG	4 cut(s)	585, 718, 1058, 2059
BseSI	GKGCMC	1 cut(s)	862
BsgI	GTGCAG	1 cut(s)	864
Bsh1236I	CGCG	3 cut(s)	16, 62, 1794
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	5 cut(s)	216, 307, 414, 1982, 2026
BshNI	GGYRCC	1 cut(s)	918
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	1 cut(s)	862
BsiSI	CCGG	7 cut(s)	38, 117, 228, 239, 281, 348, 518
BslFI	GGGAC	4 cut(s)	94, 399, 591, 1668
BslI	CCNNNNNNNGG	6 cut(s)	227, 606, 713, 1551, 1945, 1975
BsmAI	GTCTC	4 cut(s)	439, 479, 498, 1610
BsmBI	CGTCTC	1 cut(s)	479
BsmFI	GGGAC	4 cut(s)	94, 399, 591, 1668
BsmI	GAATGC	1 cut(s)	1708
BsnI	GGCC	5 cut(s)	216, 307, 414, 1982, 2026
Bso31I	GGTCTC	1 cut(s)	1610
Bsp1286I	GDGCHC	2 cut(s)	862, 1776
Bsp13I	TCCGGA	2 cut(s)	116, 517
Bsp143I	GATC	4 cut(s)	186, 454, 931, 961
Bsp19I	CCATGG	1 cut(s)	1518
BspANI	GGCC	5 cut(s)	216, 307, 414, 1982, 2026
BspCNI	CTCAG	4 cut(s)	940, 1021, 1310, 1456
BspEI	TCCGGA	2 cut(s)	116, 517
BspFNI	CGCG	3 cut(s)	16, 62, 1794
BspHI	TCATGA	1 cut(s)	934
BspLI	GGNNCC	7 cut(s)	9, 306, 920, 1210, 1438, 1626, 1656
BspMAI	CTGCAG	1 cut(s)	2019
BspOI	GCTAGC	1 cut(s)	23
BspPI	GGATC	1 cut(s)	462
BspT107I	GGYRCC	1 cut(s)	918
BspTNI	GGTCTC	1 cut(s)	1610
BsrDI	GCAATG	3 cut(s)	56, 922, 1353
BsrFI	RCCGGY	1 cut(s)	347
BsrI	ACTGG	4 cut(s)	585, 718, 1058, 2059
BssAI	RCCGGY	1 cut(s)	347
BssECI	CCNNGG	7 cut(s)	14, 281, 531, 622, 806, 1518, 1890
BssMI	GATC	4 cut(s)	186, 454, 931, 961
BssNI	GRCGYC	1 cut(s)	261
BssSI	CACGAG	1 cut(s)	1200
BssT1I	CCWWGG	2 cut(s)	806, 1518
Bst2BI	CACGAG	1 cut(s)	1200
Bst2UI	CCWGG	3 cut(s)	411, 533, 1111
Bst4CI	ACNGT	9 cut(s)	75, 478, 560, 784, 1369, 1612, 1672, 1891, 1914
Bst6I	CTCTTC	2 cut(s)	1009, 1118
BstACI	GRCGYC	1 cut(s)	261
BstBAI	YACGTR	1 cut(s)	157
BstC8I	GCNNGC	7 cut(s)	21, 679, 765, 1182, 1194, 1392, 1413
BstDEI	CTNAG	8 cut(s)	356, 948, 1008, 1175, 1297, 1452, 1464, 2157
BstDSI	CCRYGG	3 cut(s)	14, 1518, 1890
BstF5I	GGATG	3 cut(s)	616, 1194, 1531
BstFNI	CGCG	3 cut(s)	16, 62, 1794
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	3 cut(s)	62, 71, 98
BstKTI	GATC	4 cut(s)	189, 457, 934, 964
BstMAI	GTCTC	4 cut(s)	439, 479, 498, 1610
BstMBI	GATC	4 cut(s)	186, 454, 931, 961
BstMCI	CGRYCG	1 cut(s)	38
BstNI	CCWGG	3 cut(s)	411, 533, 1111
BstNSI	RCATGY	1 cut(s)	1415
BstSCI	CCNGG	4 cut(s)	280, 409, 531, 1109
BstSFI	CTRYAG	2 cut(s)	979, 2015
BstSLI	GKGCMC	1 cut(s)	862
BstUI	CGCG	3 cut(s)	16, 62, 1794
BstV2I	GAAGAC	2 cut(s)	1520, 1790
BstX2I	RGATCY	1 cut(s)	454
BstYI	RGATCY	1 cut(s)	454
Bsu36I	CCTNAGG	1 cut(s)	1175
BsuRI	GGCC	5 cut(s)	216, 307, 414, 1982, 2026
BtgI	CCRYGG	3 cut(s)	14, 1518, 1890
BtsCI	GGATG	3 cut(s)	616, 1194, 1531
BtsI	GCAGTG	2 cut(s)	1656, 2012
BtsIMutI	CAGTG	4 cut(s)	893, 1632, 1656, 2012
Cac8I	GCNNGC	7 cut(s)	21, 679, 765, 1182, 1194, 1392, 1413
CaiI	CAGNNNCTG	1 cut(s)	1975
CciI	TCATGA	1 cut(s)	934
CfoI	GCGC	3 cut(s)	62, 71, 98
Cfr10I	RCCGGY	1 cut(s)	347
Cfr13I	GGNCC	9 cut(s)	8, 131, 305, 413, 875, 1208, 1436, 1655, 2024
Cfr42I	CCGCGG	1 cut(s)	17
CseI	GACGC	1 cut(s)	337
CsiI	ACCWGGT	1 cut(s)	1109
Csp6I	GTAC	3 cut(s)	341, 919, 1513
CviAII	CATG	7 cut(s)	28, 884, 935, 1185, 1412, 1519, 1742
CviQI	GTAC	3 cut(s)	341, 919, 1513
DdeI	CTNAG	8 cut(s)	356, 948, 1008, 1175, 1297, 1452, 1464, 2157
DpnI	GATC	4 cut(s)	188, 456, 933, 963
DpnII	GATC	4 cut(s)	186, 454, 931, 961
EaeI	YGGCCR	1 cut(s)	214
Eam1104I	CTCTTC	2 cut(s)	1009, 1118
EarI	CTCTTC	2 cut(s)	1009, 1118
Eco130I	CCWWGG	2 cut(s)	806, 1518
Eco24I	GRGCYC	1 cut(s)	1776
Eco31I	GGTCTC	1 cut(s)	1610
Eco47I	GGWCC	6 cut(s)	8, 131, 875, 1208, 1436, 1655
Eco57I	CTGAAG	3 cut(s)	1011, 1656, 1784
Eco81I	CCTNAGG	1 cut(s)	1175
EcoO109I	RGGNCCY	1 cut(s)	1436
EcoRII	CCWGG	3 cut(s)	409, 531, 1109
EcoT14I	CCWWGG	2 cut(s)	806, 1518
EcoT22I	ATGCAT	1 cut(s)	1747
EcoT38I	GRGCYC	1 cut(s)	1776
ErhI	CCWWGG	2 cut(s)	806, 1518
Esp3I	CGTCTC	1 cut(s)	479
FaeI	CATG	7 cut(s)	31, 887, 938, 1188, 1415, 1522, 1745
FalI	AAGNNNNNCTT	4 cut(s)	362, 394, 846, 878
FaqI	GGGAC	4 cut(s)	94, 399, 591, 1668
FatI	CATG	7 cut(s)	27, 883, 934, 1184, 1411, 1518, 1741
FblI	GTMKAC	1 cut(s)	999
FokI	GGATG	3 cut(s)	623, 1201, 1518
FriOI	GRGCYC	1 cut(s)	1776
FspBI	CTAG	6 cut(s)	20, 807, 956, 1577, 2096, 2147
GlaI	GCGC	3 cut(s)	61, 70, 97
GsuI	CTGGAG	1 cut(s)	1997
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	5 cut(s)	216, 307, 414, 1982, 2026
HapII	CCGG	7 cut(s)	38, 117, 228, 239, 281, 348, 518
HgaI	GACGC	1 cut(s)	337
HhaI	GCGC	3 cut(s)	62, 71, 98
Hin1I	GRCGYC	1 cut(s)	261
Hin1II	CATG	7 cut(s)	31, 887, 938, 1188, 1415, 1522, 1745
Hin6I	GCGC	3 cut(s)	60, 69, 96
HinP1I	GCGC	3 cut(s)	60, 69, 96
HincII	GTYRAC	1 cut(s)	976
HindII	GTYRAC	1 cut(s)	976
HinfI	GANTC	7 cut(s)	41, 122, 1034, 1468, 1580, 1735, 2111
HpaII	CCGG	7 cut(s)	38, 117, 228, 239, 281, 348, 518
HphI	GGTGA	4 cut(s)	76, 650, 1047, 2106
Hpy166II	GTNNAC	5 cut(s)	11, 556, 860, 976, 1000
Hpy188I	TCNGA	8 cut(s)	623, 1011, 1077, 1137, 1359, 1757, 2065, 2121
Hpy8I	GTNNAC	5 cut(s)	11, 556, 860, 976, 1000
Hpy99I	CGWCG	3 cut(s)	49, 313, 331
HpyAV	CCTTC	5 cut(s)	764, 848, 986, 1135, 2144
HpyCH4III	ACNGT	9 cut(s)	75, 478, 560, 784, 1369, 1612, 1672, 1891, 1914
HpyCH4IV	ACGT	4 cut(s)	156, 261, 488, 649
HpyF3I	CTNAG	8 cut(s)	356, 948, 1008, 1175, 1297, 1452, 1464, 2157
HpySE526I	ACGT	4 cut(s)	156, 261, 488, 649
Hsp92I	GRCGYC	1 cut(s)	261
Hsp92II	CATG	7 cut(s)	31, 887, 938, 1188, 1415, 1522, 1745
HspAI	GCGC	3 cut(s)	60, 69, 96
Kpn2I	TCCGGA	2 cut(s)	116, 517
KpnI	GGTACC	1 cut(s)	922
KspI	CCGCGG	1 cut(s)	17
Kzo9I	GATC	4 cut(s)	186, 454, 931, 961
LmnI	GCTCC	4 cut(s)	797, 1176, 1387, 1478
LweI	GCATC	9 cut(s)	712, 1012, 1179, 1253, 1601, 1754, 1788, 1819, 1866
MabI	ACCWGGT	1 cut(s)	1109
MaeI	CTAG	6 cut(s)	20, 807, 956, 1577, 2096, 2147
MaeII	ACGT	4 cut(s)	156, 261, 488, 649
MaeIII	GTNAC	3 cut(s)	157, 230, 1570
MalI	GATC	4 cut(s)	188, 456, 933, 963
MboI	GATC	4 cut(s)	186, 454, 931, 961
MboII	GAAGA	8 cut(s)	179, 519, 996, 1135, 1150, 1520, 1790, 2060
MflI	RGATCY	1 cut(s)	454
MhlI	GDGCHC	2 cut(s)	862, 1776
MluCI	AATT	5 cut(s)	627, 827, 911, 1160, 1719
MlyI	GAGTC	2 cut(s)	35, 131
MmeI	TCCRAC	2 cut(s)	1652, 1712
Mph1103I	ATGCAT	1 cut(s)	1747
MroI	TCCGGA	2 cut(s)	116, 517
MroXI	GAANNNNTTC	1 cut(s)	753
MseI	TTAA	3 cut(s)	1085, 1493, 2075
MslI	CAYNNNNRTG	1 cut(s)	1346
MspA1I	CMGCKG	5 cut(s)	16, 267, 472, 588, 1975
MspI	CCGG	7 cut(s)	38, 117, 228, 239, 281, 348, 518
MspR9I	CCNGG	4 cut(s)	282, 411, 533, 1111
Mva1269I	GAATGC	1 cut(s)	1708
MvaI	CCWGG	3 cut(s)	411, 533, 1111
MvnI	CGCG	3 cut(s)	16, 62, 1794
NciI	CCSGG	1 cut(s)	282
NcoI	CCATGG	1 cut(s)	1518
NdeII	GATC	4 cut(s)	186, 454, 931, 961
NheI	GCTAGC	1 cut(s)	19
NlaIII	CATG	7 cut(s)	31, 887, 938, 1188, 1415, 1522, 1745
NlaIV	GGNNCC	7 cut(s)	9, 306, 920, 1210, 1438, 1626, 1656
NmeAIII	GCCGAG	1 cut(s)	529
NmuCI	GTSAC	1 cut(s)	1570
NsiI	ATGCAT	1 cut(s)	1747
NspI	RCATGY	1 cut(s)	1415
PaeI	GCATGC	1 cut(s)	1415
PagI	TCATGA	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	1 cut(s)	323
PctI	GAATGC	1 cut(s)	1708
PdmI	GAANNNNTTC	1 cut(s)	753
PfeI	GAWTC	5 cut(s)	1034, 1468, 1580, 1735, 2111
PflFI	GACNNNGTC	1 cut(s)	490
PflMI	CCANNNNNTGG	1 cut(s)	1975
PleI	GAGTC	2 cut(s)	35, 130
PpsI	GAGTC	2 cut(s)	35, 130
Ppu21I	YACGTR	1 cut(s)	157
PpuMI	RGGWCCY	1 cut(s)	1436
PshBI	ATTAAT	1 cut(s)	1493
Psp1406I	AACGTT	1 cut(s)	649
Psp5II	RGGWCCY	1 cut(s)	1436
Psp6I	CCWGG	3 cut(s)	409, 531, 1109
PspGI	CCWGG	3 cut(s)	409, 531, 1109
PspN4I	GGNNCC	7 cut(s)	9, 306, 920, 1210, 1438, 1626, 1656
PspPI	GGNCC	9 cut(s)	8, 131, 305, 413, 875, 1208, 1436, 1655, 2024
PspPPI	RGGWCCY	1 cut(s)	1436
PstI	CTGCAG	1 cut(s)	2019
PstNI	CAGNNNCTG	1 cut(s)	1975
PsuI	RGATCY	1 cut(s)	454
PsyI	GACNNNGTC	1 cut(s)	490
PvuII	CAGCTG	3 cut(s)	472, 588, 1975
RsaI	GTAC	3 cut(s)	342, 920, 1514
RsaNI	GTAC	3 cut(s)	341, 919, 1513
RseI	CAYNNNNRTG	1 cut(s)	1346
SacII	CCGCGG	1 cut(s)	17
SaqAI	TTAA	3 cut(s)	1085, 1493, 2075
Sau3AI	GATC	4 cut(s)	186, 454, 931, 961
Sau96I	GGNCC	9 cut(s)	8, 131, 305, 413, 875, 1208, 1436, 1655, 2024
SchI	GAGTC	2 cut(s)	35, 131
ScrFI	CCNGG	4 cut(s)	282, 411, 533, 1111
SduI	GDGCHC	2 cut(s)	862, 1776
SexAI	ACCWGGT	1 cut(s)	1109
SfaNI	GCATC	9 cut(s)	712, 1012, 1179, 1253, 1601, 1754, 1788, 1819, 1866
SfcI	CTRYAG	2 cut(s)	979, 2015
Sfr303I	CCGCGG	1 cut(s)	17
SgrBI	CCGCGG	1 cut(s)	17
SinI	GGWCC	6 cut(s)	8, 131, 875, 1208, 1436, 1655
SmiMI	CAYNNNNRTG	1 cut(s)	1346
SphI	GCATGC	1 cut(s)	1415
Sse9I	AATT	5 cut(s)	627, 827, 911, 1160, 1719
SspI	AATATT	1 cut(s)	604
SspMI	CTAG	6 cut(s)	20, 807, 956, 1577, 2096, 2147
StyD4I	CCNGG	4 cut(s)	280, 409, 531, 1109
StyI	CCWWGG	2 cut(s)	806, 1518
TaaI	ACNGT	9 cut(s)	75, 478, 560, 784, 1369, 1612, 1672, 1891, 1914
TaiI	ACGT	4 cut(s)	159, 264, 491, 652
TaqI	TCGA	1 cut(s)	757
TasI	AATT	5 cut(s)	627, 827, 911, 1160, 1719
TatI	WGTACW	1 cut(s)	340
TauI	GCSGC	8 cut(s)	19, 60, 101, 219, 503, 1355, 1592, 1985
TfiI	GAWTC	5 cut(s)	1034, 1468, 1580, 1735, 2111
Tru1I	TTAA	3 cut(s)	1085, 1493, 2075
Tru9I	TTAA	3 cut(s)	1085, 1493, 2075
TscAI	CASTG	4 cut(s)	900, 1639, 1656, 2019
TseFI	GTSAC	1 cut(s)	1570
Tsp45I	GTSAC	1 cut(s)	1570
TspDTI	ATGAA	4 cut(s)	717, 903, 1520, 2082
TspRI	CASTG	4 cut(s)	900, 1639, 1656, 2019
Tth111I	GACNNNGTC	1 cut(s)	490
Van91I	CCANNNNNTGG	1 cut(s)	1975
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	6 cut(s)	8, 131, 875, 1208, 1436, 1655
VspI	ATTAAT	1 cut(s)	1493
XapI	RAATTY	2 cut(s)	827, 911
XceI	RCATGY	1 cut(s)	1415
XmaJI	CCTAGG	1 cut(s)	806
XmiI	GTMKAC	1 cut(s)	999
XmnI	GAANNNNTTC	1 cut(s)	753
XspI	CTAG	6 cut(s)	20, 807, 956, 1577, 2096, 2147
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.