pycom16g02820

Produces ATP from ADP in the presence of a proton gradient across the membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0001956
Physical Location & Seq
Reverse (-)
1796797 .. 1798757
1961 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g02820.3

Sequence Viewer

Length: 948 bp
ATGGAACTTATCAACAACGTTGCTAAGGCTCATGGTGGTTTCTCTGTGTTTGCTGGTGTCGGAGAACGTACTCGTGAGGGCAATGACTTGTACAGGGAAATGATTGAGAGTGGTGTCATTAAGCTAGGCGAAAAGCAGGCTGACAGCAAATGTGCTCTTGTGTACGGTCAAATGAATGAGCCTCCTGGTGCTCGTGCTCGTGTTGGTTTGACTGGGCTTACTGTGGCCGAACACTTCCGTGATGCTGAAGGGCAAGATGTGCTTCTATTTATTGACAACATTTTCCGATTTACCCAAGCAAACTCAGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCTGTCGGGTACCAGCCTACTTTAGCTACTGATCTTGGAGGTCTTCAGGAGCGTATCACAACTACCAAGAAGGGTTCCATCACTTCTGTCCAAGCTATCTATGTGCCTGCTGATGATTTGACAGATCCTGCTCCTGCCACTACCTTTGCTCACTTGGATGCCACCACTGTGCTTTCACGACAGATCTCTGAGCTTGGTATCTATCCTGCCGTGGATCCTCTTGATTCCACATCTCGTATGCTCTCCCCTCATATTTTGGGTGAGGAGCACTACAACACTGCTCGTGGTGTCCAGAAGGTTCTTCAGAACTACAAGAATTTGCAAGATATTATTGCTATTTTGGGGATGGACGAGCTCAGTGAAGATGATAAGTTGACTGTAGCCCGTGCTCGTAAGATTCAACGGTTCTTGAGTCAGCCGTTCCACGTTGCAGAAGTTTTCACGGGTGCCCCTGGGAAGTACGTGGAGTTGAAAGAAAGCATTACCTCCTTCCAGGGAGTGTTGGACGGAAAGTACGATGACCTTCCAGAACAATCGTTCTACATGGTTGGAGGTATTGAGGAGGTCATTGCCAAGGCAGAGAAGATTTCCAAGGAGTCCGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map01100 map04714 map05010 map05012 map05016
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N Synthase_beta

Protein Analysis

316

Amino Acids

34.28

Weight (kDa)

5.05

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 2 cut(s) 348, 785
AciI CCGC 1 cut(s) 939
AclI AACGTT 1 cut(s) 18
AclWI GGATC 3 cut(s) 458, 548, 561
AcoI YGGCCR 1 cut(s) 225
AcsI RAATTY 1 cut(s) 655
AcuI CTGAAG 3 cut(s) 267, 368, 626
AfaI GTAC 6 cut(s) 70, 92, 164, 350, 800, 854
AgsI TTSAA 2 cut(s) 740, 811
AjnI CCWGG 3 cut(s) 184, 790, 831
AleI CACNNNNGTG 2 cut(s) 237, 506
AluBI AGCT 5 cut(s) 124, 365, 434, 532, 694
AluI AGCT 5 cut(s) 124, 365, 434, 532, 694
Alw21I GWGCWC 6 cut(s) 157, 193, 199, 609, 696, 730
AlwI GGATC 3 cut(s) 458, 548, 561
AlwNI CAGNNNCTG 1 cut(s) 467
AoxI GGCC 1 cut(s) 225
ApeKI GCWGC 1 cut(s) 941
ApoI RAATTY 1 cut(s) 655
Asp718I GGTACC 1 cut(s) 348
AsuHPI GGTGA 1 cut(s) 611
BaeGI GKGCMC 1 cut(s) 790
BamHI GGATCC 1 cut(s) 553
BanI GGYRCC 2 cut(s) 348, 785
BanII GRGCYC 1 cut(s) 696
BauI CACGAG 4 cut(s) 72, 192, 198, 621
BbsI GAAGAC 1 cut(s) 374
Bbv12I GWGCWC 6 cut(s) 157, 193, 199, 609, 696, 730
BbvI GCAGC 1 cut(s) 928
BccI CCATC 3 cut(s) 343, 425, 679
BceAI ACGGC 2 cut(s) 533, 742
BciT130I CCWGG 3 cut(s) 186, 792, 833
BciVI GTATCC 1 cut(s) 341
BfaI CTAG 1 cut(s) 125
BfmI CTRYAG 1 cut(s) 717
BfuI GTATCC 1 cut(s) 341
BglII AGATCT 1 cut(s) 522
BisI GCNGC 1 cut(s) 942
BlsI GCNGC 1 cut(s) 943
Bme1390I CCNGG 3 cut(s) 186, 792, 833
BmiI GGNNCC 4 cut(s) 350, 415, 555, 787
BmrFI CCNGG 3 cut(s) 186, 792, 833
BmrI ACTGGG 1 cut(s) 222
BmsI GCATC 2 cut(s) 232, 487
BmuI ACTGGG 1 cut(s) 222
BpiI GAAGAC 1 cut(s) 374
Bpu10I CCTNAGC 1 cut(s) 24
BpuEI CTTGAG 1 cut(s) 769
BsaAI YACGTR 1 cut(s) 802
BsaJI CCNNGG 6 cut(s) 549, 790, 791, 832, 912, 930
Bse1I ACTGG 1 cut(s) 217
Bse3DI GCAATG 2 cut(s) 88, 906
BseBI CCWGG 3 cut(s) 186, 792, 833
BseDI CCNNGG 6 cut(s) 549, 790, 791, 832, 912, 930
BseGI GGATG 2 cut(s) 502, 690
BseMI GCAATG 2 cut(s) 88, 906
BseMII CTCAG 3 cut(s) 318, 519, 709
BseNI ACTGG 1 cut(s) 217
BseRI GAGGAG 2 cut(s) 617, 914
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 1 cut(s) 928
BshFI GGCC 1 cut(s) 227
BshNI GGYRCC 2 cut(s) 348, 785
BsiHKAI GWGCWC 6 cut(s) 157, 193, 199, 609, 696, 730
BsnI GGCC 1 cut(s) 227
Bsp1286I GDGCHC 7 cut(s) 157, 193, 199, 609, 696, 730, 790
Bsp1407I TGTACA 1 cut(s) 90
Bsp143I GATC 4 cut(s) 370, 463, 522, 553
BspACI CCGC 1 cut(s) 939
BspANI GGCC 1 cut(s) 227
BspCNI CTCAG 3 cut(s) 317, 520, 708
BspLI GGNNCC 4 cut(s) 350, 415, 555, 787
BspPI GGATC 3 cut(s) 458, 548, 561
BspT107I GGYRCC 2 cut(s) 348, 785
BsrDI GCAATG 2 cut(s) 88, 906
BsrGI TGTACA 1 cut(s) 90
BsrI ACTGG 1 cut(s) 217
BssECI CCNNGG 6 cut(s) 549, 790, 791, 832, 912, 930
BssMI GATC 4 cut(s) 370, 463, 522, 553
BssSI CACGAG 4 cut(s) 72, 192, 198, 621
BssT1I CCWWGG 2 cut(s) 912, 930
Bst2BI CACGAG 4 cut(s) 72, 192, 198, 621
Bst2UI CCWGG 3 cut(s) 186, 792, 833
Bst4CI ACNGT 5 cut(s) 167, 223, 508, 718, 744
BstAPI GCANNNNNTGC 1 cut(s) 259
BstAUI TGTACA 1 cut(s) 90
BstBAI YACGTR 1 cut(s) 802
BstC8I GCNNGC 2 cut(s) 138, 447
BstDEI CTNAG 4 cut(s) 24, 304, 528, 695
BstDSI CCRYGG 1 cut(s) 549
BstF5I GGATG 2 cut(s) 502, 690
BstKTI GATC 4 cut(s) 373, 466, 525, 556
BstMBI GATC 4 cut(s) 370, 463, 522, 553
BstMWI GCNNNNNNNGC 1 cut(s) 259
BstNI CCWGG 3 cut(s) 186, 792, 833
BstSCI CCNGG 3 cut(s) 184, 790, 831
BstSFI CTRYAG 1 cut(s) 717
BstSLI GKGCMC 1 cut(s) 790
BstV1I GCAGC 1 cut(s) 928
BstV2I GAAGAC 1 cut(s) 374
BstX2I RGATCY 3 cut(s) 463, 522, 553
BstYI RGATCY 3 cut(s) 463, 522, 553
BsuI GTATCC 1 cut(s) 341
BsuRI GGCC 1 cut(s) 227
BtgI CCRYGG 1 cut(s) 549
BtsCI GGATG 2 cut(s) 502, 690
BtsI GCAGTG 1 cut(s) 615
BtsIMutI CAGTG 3 cut(s) 504, 615, 703
Cac8I GCNNGC 2 cut(s) 138, 447
CaiI CAGNNNCTG 1 cut(s) 467
Csp6I GTAC 6 cut(s) 69, 91, 163, 349, 799, 853
CspCI CAANNNNNGTGG 2 cut(s) 466, 501
CviAII CATG 2 cut(s) 32, 883
CviQI GTAC 6 cut(s) 69, 91, 163, 349, 799, 853
DdeI CTNAG 4 cut(s) 24, 304, 528, 695
DpnI GATC 4 cut(s) 372, 465, 524, 555
DpnII GATC 4 cut(s) 370, 463, 522, 553
EaeI YGGCCR 1 cut(s) 225
Ecl136II GAGCTC 1 cut(s) 694
Eco130I CCWWGG 2 cut(s) 912, 930
Eco24I GRGCYC 1 cut(s) 696
Eco53kI GAGCTC 1 cut(s) 694
Eco57I CTGAAG 3 cut(s) 267, 368, 626
EcoICRI GAGCTC 1 cut(s) 694
EcoRII CCWGG 3 cut(s) 184, 790, 831
EcoT14I CCWWGG 2 cut(s) 912, 930
EcoT38I GRGCYC 1 cut(s) 696
ErhI CCWWGG 2 cut(s) 912, 930
FaeI CATG 2 cut(s) 35, 886
FaiI YATR 5 cut(s) 33, 441, 578, 591, 884
FalI AAGNNNNNCTT 2 cut(s) 246, 278
FatI CATG 2 cut(s) 31, 882
Fnu4HI GCNGC 1 cut(s) 942
FokI GGATG 2 cut(s) 509, 697
FriOI GRGCYC 1 cut(s) 696
Fsp4HI GCNGC 1 cut(s) 942
FspBI CTAG 1 cut(s) 125
GluI GCNGC 1 cut(s) 942
HaeIII GGCC 1 cut(s) 227
Hin1II CATG 2 cut(s) 35, 886
HincII GTYRAC 1 cut(s) 714
HindII GTYRAC 1 cut(s) 714
HinfI GANTC 4 cut(s) 563, 736, 751, 935
HphI GGTGA 1 cut(s) 611
Hpy166II GTNNAC 2 cut(s) 163, 714
Hpy188I TCNGA 5 cut(s) 62, 287, 307, 529, 645
Hpy188III TCNNGA 7 cut(s) 74, 386, 516, 560, 631, 748, 866
Hpy8I GTNNAC 2 cut(s) 163, 714
HpyAV CCTTC 5 cut(s) 242, 403, 628, 838, 872
HpyCH4III ACNGT 5 cut(s) 167, 223, 508, 718, 744
HpyCH4IV ACGT 4 cut(s) 18, 67, 765, 801
HpyCH4V TGCA 2 cut(s) 661, 770
HpyF10VI GCNNNNNNNGC 1 cut(s) 259
HpyF3I CTNAG 4 cut(s) 24, 304, 528, 695
HpySE526I ACGT 4 cut(s) 18, 67, 765, 801
Hsp92II CATG 2 cut(s) 35, 886
KpnI GGTACC 1 cut(s) 352
Kzo9I GATC 4 cut(s) 370, 463, 522, 553
LmnI GCTCC 3 cut(s) 388, 475, 604
Lsp1109I GCAGC 1 cut(s) 928
LweI GCATC 2 cut(s) 232, 487
MaeI CTAG 1 cut(s) 125
MaeII ACGT 4 cut(s) 18, 67, 765, 801
MalI GATC 4 cut(s) 372, 465, 524, 555
MboI GATC 4 cut(s) 370, 463, 522, 553
MboII GAAGA 4 cut(s) 374, 632, 713, 934
MflI RGATCY 3 cut(s) 463, 522, 553
MhlI GDGCHC 7 cut(s) 157, 193, 199, 609, 696, 730, 790
MluCI AATT 1 cut(s) 655
MlyI GAGTC 2 cut(s) 760, 944
MmeI TCCRAC 3 cut(s) 40, 822, 868
MseI TTAA 2 cut(s) 120, 946
MslI CAYNNNNRTG 3 cut(s) 237, 495, 506
MspA1I CMGCKG 1 cut(s) 941
MspR9I CCNGG 3 cut(s) 186, 792, 833
MvaI CCWGG 3 cut(s) 186, 792, 833
MwoI GCNNNNNNNGC 1 cut(s) 259
NdeII GATC 4 cut(s) 370, 463, 522, 553
NlaIII CATG 2 cut(s) 35, 886
NlaIV GGNNCC 4 cut(s) 350, 415, 555, 787
OliI CACNNNNGTG 2 cut(s) 237, 506
PasI CCCWGGG 1 cut(s) 791
PcsI WCGNNNNNNNCGW 1 cut(s) 852
PfeI GAWTC 2 cut(s) 563, 736
PkrI GCNGC 1 cut(s) 943
PleI GAGTC 2 cut(s) 759, 943
PpsI GAGTC 2 cut(s) 759, 943
Ppu21I YACGTR 1 cut(s) 802
Psp124BI GAGCTC 1 cut(s) 696
Psp1406I AACGTT 1 cut(s) 18
Psp6I CCWGG 3 cut(s) 184, 790, 831
PspGI CCWGG 3 cut(s) 184, 790, 831
PspN4I GGNNCC 4 cut(s) 350, 415, 555, 787
PstNI CAGNNNCTG 1 cut(s) 467
PsuI RGATCY 3 cut(s) 463, 522, 553
RsaI GTAC 6 cut(s) 70, 92, 164, 350, 800, 854
RsaNI GTAC 6 cut(s) 69, 91, 163, 349, 799, 853
RseI CAYNNNNRTG 3 cut(s) 237, 495, 506
SacI GAGCTC 1 cut(s) 696
SaqAI TTAA 2 cut(s) 120, 946
SatI GCNGC 1 cut(s) 942
Sau3AI GATC 4 cut(s) 370, 463, 522, 553
SchI GAGTC 2 cut(s) 760, 944
ScrFI CCNGG 3 cut(s) 186, 792, 833
SduI GDGCHC 7 cut(s) 157, 193, 199, 609, 696, 730, 790
SfaNI GCATC 2 cut(s) 232, 487
SfcI CTRYAG 1 cut(s) 717
SmiMI CAYNNNNRTG 3 cut(s) 237, 495, 506
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
Sse9I AATT 1 cut(s) 655
SsiI CCGC 1 cut(s) 939
SspMI CTAG 1 cut(s) 125
SstI GAGCTC 1 cut(s) 696
StyD4I CCNGG 3 cut(s) 184, 790, 831
StyI CCWWGG 2 cut(s) 912, 930
TaaI ACNGT 5 cut(s) 167, 223, 508, 718, 744
TaiI ACGT 4 cut(s) 21, 70, 768, 804
TasI AATT 1 cut(s) 655
TatI WGTACW 1 cut(s) 90
TfiI GAWTC 2 cut(s) 563, 736
Tru1I TTAA 2 cut(s) 120, 946
Tru9I TTAA 2 cut(s) 120, 946
TscAI CASTG 3 cut(s) 511, 622, 703
TseI GCWGC 1 cut(s) 941
TspDTI ATGAA 1 cut(s) 188
TspGWI ACGGA 2 cut(s) 227, 861
TspRI CASTG 3 cut(s) 511, 622, 703
XapI RAATTY 1 cut(s) 655
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.