Rh4BG334400

Produces ATP from ADP in the presence of a proton gradient across the membrane

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
49848468 .. 49850762
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG334400.1

Sequence Viewer

Length: 1329 bp
ATGGCTTCCCGTAGGCTCTTATCATCTCTCGTCCGGTCGTCGGTACGCCGATCTCCGTCCAAATCTCCGATCTCCAACTCACACCCTAGGCTCACCTCCCCGTCGCCCCCGCCTCACCGCGCGTCGCCGTACGGCTACCTCCTCACGCGCGTGGCCGAGTACGCCACCGCCGCAGCCGCAGAGGTCAAGTCGGCGTCACCGGCCGGGCCAAAGGACGGCGCCAAGGGAAAAATCACAGACGAATTCACCGGGAAAGGCTCGATCGGGCAGGTGTGCCAGGTCATCGGAGCCGTCGTCGATGTGAGGTTCCAGGAGGGCTTGCCGCCGATCTTGACGGCGCTGGAAGTGCTGGACAACTCGATCCGATTGGTGCTTGAGGTGGCTCAGCACTTGGGTGAGAACATGGTCAGGACCATTGCTATGGATGGGACTGAAGGGCTTGTTAGAGGACAGCGCGTGCTCAACACCGGCTCTCCCATCACTGTGCCTGTTGGTAGGTCTACACTTGGTCGTATCATGAACGTTATTGGAGAGCCCATTGATCATAGAGGCGATATCAAAACCGATCACTTTCTGCCCATTCATAGAGAAGCTCCAGCCTTTGTTGAGCAAGCTACTGAACAAGAGATCCTTGATACTGGAATTAAGGTTGTTGACCTTCTTGCTCCGTACCAAAGAGGAGGAAAGATTGGGTTGTTCGGTGGTGCTGGTGTAGGAAAGACTGTGCTTATTATGGAACTTATCAACAATGTCGCAAAAGCTCATGGTGGTTTCTCCGTGTTTGCCGGTGTTGGAGAACGCACTCGTGAGGGTAATGACTTGTACAGGGAAATGATTGAGAGTGGTGTCATTAAGCTCGGTGAAAAGCAGGCTGATAGCAAATGTGCTCTAGTGTACGGTCAAATGAATGAGCCCCCTGGTGCCCGTGCTCGTGTTGGGTTGACTGGCCTGACTGTGGCAGAACATTTCCGTGATGCTGAAGGGCAAGATGTGCTCCTCTTTATCGACAACATTTTCCGATTTACCCAAGCTAACTCTGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCCGTCGGATACCAACCTACTTTAGCTACTGATCTTGGAGGTCTTCAAGAGCGTATCACAACCACCAAGAAGGGTTCCATTACTTCTGTCCAAGCTATTTATGTGCCTGCTGATGACTTGACAGATCCTGCTCCTGCAACTACTTTTGCTCACTTGGATGCCACAACTGTGTTGTCTAGACAGGTCTGTCACAACTTTGGACTACTTTTAGAACCCCTTTGCATGTTTTCAATTGGTAACCTTGTTGTTTTGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

442

Amino Acids

47.14

Weight (kDa)

6.81

Isoelectric Point (pI)

36.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Synthase_beta PF11421 1 - 50 4.4e-16 ATP synthase F1 beta subunit
ATP-synt_ab_N PF02874 91 - 157 1.7e-17 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 214 - 420 2.6e-61 ATP synthase alpha/beta family, nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 259
AasI GACNNNNNNGTC 1 cut(s) 1257
Acc36I ACCTGC 1 cut(s) 259
AccB1I GGYRCC 2 cut(s) 218, 920
AccI GTMKAC 1 cut(s) 500
AccII CGCG 5 cut(s) 120, 122, 148, 150, 456
AciI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
AclI AACGTT 1 cut(s) 522
AclWI GGATC 3 cut(s) 355, 622, 1190
AcoI YGGCCR 2 cut(s) 153, 201
AcsI RAATTY 1 cut(s) 242
AcuI CTGAAG 2 cut(s) 453, 999
AcyI GRCGYC 2 cut(s) 194, 219
AfaI GTAC 6 cut(s) 45, 131, 161, 671, 824, 896
AfiI CCNNNNNNNGG 3 cut(s) 40, 215, 955
AgsI TTSAA 3 cut(s) 1118, 1302, 1324
AjnI CCWGG 3 cut(s) 276, 309, 916
AleI CACNNNNGTG 3 cut(s) 149, 393, 1238
AloI GAACNNNNNNTCC 2 cut(s) 612, 644
AluBI AGCT 7 cut(s) 593, 614, 761, 856, 1031, 1097, 1166
AluI AGCT 7 cut(s) 593, 614, 761, 856, 1031, 1097, 1166
Alw21I GWGCWC 4 cut(s) 462, 889, 931, 996
AlwI GGATC 3 cut(s) 355, 622, 1190
AlwNI CAGNNNCTG 1 cut(s) 1199
AoxI GGCC 4 cut(s) 153, 201, 206, 946
ApeKI GCWGC 1 cut(s) 173
ApoI RAATTY 1 cut(s) 242
AspA2I CCTAGG 1 cut(s) 86
AspLEI GCGC 5 cut(s) 122, 150, 221, 340, 456
AspS9I GGNCC 2 cut(s) 206, 411
AsuC2I CCSGG 2 cut(s) 205, 250
AsuHPI GGTGA 6 cut(s) 85, 107, 189, 238, 407, 872
AvaII GGWCC 1 cut(s) 411
AvrII CCTAGG 1 cut(s) 86
BaeGI GKGCMC 1 cut(s) 925
BanI GGYRCC 2 cut(s) 218, 920
BanII GRGCYC 2 cut(s) 537, 915
BauI CACGAG 2 cut(s) 804, 930
BbsI GAAGAC 1 cut(s) 1106
Bbv12I GWGCWC 4 cut(s) 462, 889, 931, 996
BbvI GCAGC 1 cut(s) 185
BccI CCATC 3 cut(s) 419, 485, 1075
BceAI ACGGC 6 cut(s) 112, 148, 232, 275, 351, 1058
BciT130I CCWGG 3 cut(s) 278, 311, 918
BciVI GTATCC 2 cut(s) 1073, 1073
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 2 cut(s) 205, 250
BfaI CTAG 3 cut(s) 87, 890, 1248
BfoI RGCGCY 2 cut(s) 222, 341
BfuAI ACCTGC 1 cut(s) 259
BfuI GTATCC 2 cut(s) 1073, 1073
BisI GCNGC 4 cut(s) 171, 174, 177, 323
BlnI CCTAGG 1 cut(s) 86
BlpI GCTNAGC 1 cut(s) 384
BlsI GCNGC 4 cut(s) 172, 175, 178, 324
Bme1390I CCNGG 5 cut(s) 205, 250, 278, 311, 918
Bme18I GGWCC 1 cut(s) 411
BmgT120I GGNCC 2 cut(s) 206, 411
BmiI GGNNCC 5 cut(s) 220, 289, 308, 922, 1147
BmrFI CCNGG 5 cut(s) 205, 250, 278, 311, 918
BmsI GCATC 2 cut(s) 964, 1219
BpiI GAAGAC 1 cut(s) 1106
BpmI CTGGAG 1 cut(s) 579
Bpu1102I GCTNAGC 1 cut(s) 384
BpuEI CTTGAG 1 cut(s) 395
BpuMI CCSGG 2 cut(s) 205, 250
BsaHI GRCGYC 2 cut(s) 194, 219
BsaJI CCNNGG 3 cut(s) 86, 222, 916
BsaWI WCCGGW 1 cut(s) 33
BsaXI ACNNNNNCTCC 4 cut(s) 279, 309, 457, 487
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 215, 955
Bse118I RCCGGY 3 cut(s) 199, 467, 785
Bse1I ACTGG 2 cut(s) 643, 949
Bse3DI GCAATG 1 cut(s) 414
BseBI CCWGG 3 cut(s) 278, 311, 918
BseDI CCNNGG 3 cut(s) 86, 222, 916
BseGI GGATG 2 cut(s) 430, 1234
BseLI CCNNNNNNNGG 3 cut(s) 40, 215, 955
BseMI GCAATG 1 cut(s) 414
BseMII CTCAG 2 cut(s) 398, 1029
BseNI ACTGG 2 cut(s) 643, 949
BseRI GAGGAG 3 cut(s) 131, 693, 986
BseSI GKGCMC 1 cut(s) 925
BseX3I CGGCCG 1 cut(s) 201
BseXI GCAGC 1 cut(s) 185
Bsh1236I CGCG 5 cut(s) 120, 122, 148, 150, 456
Bsh1285I CGRYCG 3 cut(s) 38, 204, 264
BshFI GGCC 4 cut(s) 155, 203, 208, 948
BshNI GGYRCC 2 cut(s) 218, 920
BsiEI CGRYCG 3 cut(s) 38, 204, 264
BsiHKAI GWGCWC 4 cut(s) 462, 889, 931, 996
BsiSI CCGG 6 cut(s) 34, 200, 204, 249, 468, 786
BsiWI CGTACG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 442
BslI CCNNNNNNNGG 3 cut(s) 40, 215, 955
BsmFI GGGAC 1 cut(s) 442
BsnI GGCC 4 cut(s) 155, 203, 208, 948
Bsp1286I GDGCHC 7 cut(s) 462, 537, 889, 915, 925, 931, 996
Bsp1407I TGTACA 1 cut(s) 822
Bsp1720I GCTNAGC 1 cut(s) 384
BspACI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
BspANI GGCC 4 cut(s) 155, 203, 208, 948
BspCNI CTCAG 2 cut(s) 397, 1030
BspFNI CGCG 5 cut(s) 120, 122, 148, 150, 456
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 5 cut(s) 220, 289, 308, 922, 1147
BspMI ACCTGC 1 cut(s) 259
BspPI GGATC 3 cut(s) 355, 622, 1190
BspT107I GGYRCC 2 cut(s) 218, 920
BsrDI GCAATG 1 cut(s) 414
BsrFI RCCGGY 3 cut(s) 199, 467, 785
BsrGI TGTACA 1 cut(s) 822
BsrI ACTGG 2 cut(s) 643, 949
BssAI RCCGGY 3 cut(s) 199, 467, 785
BssECI CCNNGG 3 cut(s) 86, 222, 916
BssNI GRCGYC 2 cut(s) 194, 219
BssSI CACGAG 2 cut(s) 804, 930
BssT1I CCWWGG 2 cut(s) 86, 222
Bst2BI CACGAG 2 cut(s) 804, 930
Bst2UI CCWGG 3 cut(s) 278, 311, 918
Bst4CI ACNGT 5 cut(s) 484, 724, 899, 955, 1240
BstACI GRCGYC 2 cut(s) 194, 219
BstAPI GCANNNNNTGC 1 cut(s) 991
BstAUI TGTACA 1 cut(s) 822
BstC8I GCNNGC 5 cut(s) 320, 458, 612, 870, 1179
BstDEI CTNAG 2 cut(s) 384, 1038
BstEII GGTNACC 1 cut(s) 1307
BstF5I GGATG 2 cut(s) 430, 1234
BstFNI CGCG 5 cut(s) 120, 122, 148, 150, 456
BstH2I RGCGCY 2 cut(s) 222, 341
BstHHI GCGC 5 cut(s) 122, 150, 221, 340, 456
BstMCI CGRYCG 3 cut(s) 38, 204, 264
BstMWI GCNNNNNNNGC 6 cut(s) 161, 170, 176, 200, 346, 991
BstNI CCWGG 3 cut(s) 278, 311, 918
BstNSI RCATGY 1 cut(s) 1297
BstPI GGTNACC 1 cut(s) 1307
BstSCI CCNGG 5 cut(s) 203, 248, 276, 309, 916
BstSLI GKGCMC 1 cut(s) 925
BstUI CGCG 5 cut(s) 120, 122, 148, 150, 456
BstV1I GCAGC 1 cut(s) 185
BstV2I GAAGAC 1 cut(s) 1106
BstX2I RGATCY 2 cut(s) 627, 1195
BstXI CCANNNNNNTGG 1 cut(s) 421
BstYI RGATCY 2 cut(s) 627, 1195
BstZI CGGCCG 1 cut(s) 201
BsuI GTATCC 2 cut(s) 1073, 1073
BsuRI GGCC 4 cut(s) 155, 203, 208, 948
BtsCI GGATG 2 cut(s) 430, 1234
BtsIMutI CAGTG 1 cut(s) 480
BveI ACCTGC 1 cut(s) 259
Cac8I GCNNGC 5 cut(s) 320, 458, 612, 870, 1179
CaiI CAGNNNCTG 1 cut(s) 1199
CciI TCATGA 1 cut(s) 516
CfoI GCGC 5 cut(s) 122, 150, 221, 340, 456
Cfr10I RCCGGY 3 cut(s) 199, 467, 785
Cfr13I GGNCC 2 cut(s) 206, 411
CseI GACGC 2 cut(s) 111, 183
Csp6I GTAC 6 cut(s) 44, 130, 160, 670, 823, 895
CviAII CATG 4 cut(s) 403, 517, 764, 1294
CviQI GTAC 6 cut(s) 44, 130, 160, 670, 823, 895
DdeI CTNAG 2 cut(s) 384, 1038
DinI GGCGCC 1 cut(s) 220
DrdI GACNNNNNNGTC 1 cut(s) 1257
DseDI GACNNNNNNGTC 1 cut(s) 1257
EaeI YGGCCR 2 cut(s) 153, 201
EagI CGGCCG 1 cut(s) 201
EclXI CGGCCG 1 cut(s) 201
Eco130I CCWWGG 2 cut(s) 86, 222
Eco24I GRGCYC 2 cut(s) 537, 915
Eco32I GATATC 1 cut(s) 556
Eco47I GGWCC 1 cut(s) 411
Eco52I CGGCCG 1 cut(s) 201
Eco57I CTGAAG 2 cut(s) 453, 999
Eco91I GGTNACC 1 cut(s) 1307
EcoO65I GGTNACC 1 cut(s) 1307
EcoRI GAATTC 1 cut(s) 242
EcoRII CCWGG 3 cut(s) 276, 309, 916
EcoRV GATATC 1 cut(s) 556
EcoT14I CCWWGG 2 cut(s) 86, 222
EcoT38I GRGCYC 2 cut(s) 537, 915
EgeI GGCGCC 1 cut(s) 220
EheI GGCGCC 1 cut(s) 220
ErhI CCWWGG 2 cut(s) 86, 222
FaeI CATG 4 cut(s) 406, 520, 767, 1297
FaiI YATR 9 cut(s) 404, 422, 518, 546, 585, 734, 765, 1173, 1295
FalI AAGNNNNNCTT 2 cut(s) 615, 647
FaqI GGGAC 1 cut(s) 442
FatI CATG 4 cut(s) 402, 516, 763, 1293
FauI CCCGC 1 cut(s) 117
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 500
Fnu4HI GCNGC 4 cut(s) 171, 174, 177, 323
FokI GGATG 2 cut(s) 437, 1241
FriOI GRGCYC 2 cut(s) 537, 915
Fsp4HI GCNGC 4 cut(s) 171, 174, 177, 323
FspBI CTAG 3 cut(s) 87, 890, 1248
GlaI GCGC 5 cut(s) 121, 149, 220, 339, 455
GluI GCNGC 4 cut(s) 171, 174, 177, 323
GsuI CTGGAG 1 cut(s) 579
HaeII RGCGCY 2 cut(s) 222, 341
HaeIII GGCC 4 cut(s) 155, 203, 208, 948
HapII CCGG 6 cut(s) 34, 200, 204, 249, 468, 786
HgaI GACGC 2 cut(s) 111, 183
HhaI GCGC 5 cut(s) 122, 150, 221, 340, 456
Hin1I GRCGYC 2 cut(s) 194, 219
Hin1II CATG 4 cut(s) 406, 520, 767, 1297
Hin6I GCGC 5 cut(s) 120, 148, 219, 338, 454
HinP1I GCGC 5 cut(s) 120, 148, 219, 338, 454
HincII GTYRAC 2 cut(s) 655, 942
HindII GTYRAC 2 cut(s) 655, 942
HpaII CCGG 6 cut(s) 34, 200, 204, 249, 468, 786
HphI GGTGA 6 cut(s) 85, 107, 189, 238, 407, 872
Hpy166II GTNNAC 4 cut(s) 501, 655, 895, 942
Hpy188I TCNGA 6 cut(s) 69, 287, 365, 1019, 1039, 1079
Hpy188III TCNNGA 6 cut(s) 331, 409, 517, 806, 1118, 1248
Hpy8I GTNNAC 4 cut(s) 501, 655, 895, 942
Hpy99I CGWCG 6 cut(s) 43, 106, 127, 296, 299, 1079
HpyAV CCTTC 4 cut(s) 428, 668, 974, 1135
HpyCH4III ACNGT 5 cut(s) 484, 724, 899, 955, 1240
HpyCH4IV ACGT 1 cut(s) 522
HpyCH4V TGCA 2 cut(s) 1208, 1293
HpyF10VI GCNNNNNNNGC 6 cut(s) 161, 170, 176, 200, 346, 991
HpyF3I CTNAG 2 cut(s) 384, 1038
HpySE526I ACGT 1 cut(s) 522
Hsp92I GRCGYC 2 cut(s) 194, 219
Hsp92II CATG 4 cut(s) 406, 520, 767, 1297
HspAI GCGC 5 cut(s) 120, 148, 219, 338, 454
KasI GGCGCC 1 cut(s) 218
Ksp22I TGATCA 1 cut(s) 541
LmnI GCTCC 5 cut(s) 287, 598, 670, 999, 1207
Lsp1109I GCAGC 1 cut(s) 185
LweI GCATC 2 cut(s) 964, 1219
MaeI CTAG 3 cut(s) 87, 890, 1248
MaeII ACGT 1 cut(s) 522
MaeIII GTNAC 3 cut(s) 195, 1259, 1307
MboII GAAGA 1 cut(s) 1106
MfeI CAATTG 1 cut(s) 1302
MflI RGATCY 2 cut(s) 627, 1195
MhlI GDGCHC 7 cut(s) 462, 537, 889, 915, 925, 931, 996
MluCI AATT 4 cut(s) 242, 642, 1302, 1324
Mly113I GGCGCC 1 cut(s) 219
MmeI TCCRAC 3 cut(s) 99, 772, 1057
MseI TTAA 2 cut(s) 645, 852
MslI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
MspI CCGG 6 cut(s) 34, 200, 204, 249, 468, 786
MspR9I CCNGG 5 cut(s) 205, 250, 278, 311, 918
MunI CAATTG 1 cut(s) 1302
MvaI CCWGG 3 cut(s) 278, 311, 918
MvnI CGCG 5 cut(s) 120, 122, 148, 150, 456
MwoI GCNNNNNNNGC 6 cut(s) 161, 170, 176, 200, 346, 991
NarI GGCGCC 1 cut(s) 219
NciI CCSGG 2 cut(s) 205, 250
NlaIII CATG 4 cut(s) 406, 520, 767, 1297
NlaIV GGNNCC 5 cut(s) 220, 289, 308, 922, 1147
NmeAIII GCCGAG 1 cut(s) 181
NmuCI GTSAC 2 cut(s) 195, 1259
NspI RCATGY 1 cut(s) 1297
OliI CACNNNNGTG 3 cut(s) 149, 393, 1238
PagI TCATGA 1 cut(s) 516
PaqCI CACCTGC 1 cut(s) 259
PcsI WCGNNNNNNNCGW 1 cut(s) 291
Pfl23II CGTACG 1 cut(s) 129
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 4 cut(s) 172, 175, 178, 324
Ple19I CGATCG 1 cut(s) 264
PluTI GGCGCC 1 cut(s) 222
Psp1406I AACGTT 1 cut(s) 522
Psp6I CCWGG 3 cut(s) 276, 309, 916
PspEI GGTNACC 1 cut(s) 1307
PspGI CCWGG 3 cut(s) 276, 309, 916
PspLI CGTACG 1 cut(s) 129
PspN4I GGNNCC 5 cut(s) 220, 289, 308, 922, 1147
PspPI GGNCC 2 cut(s) 206, 411
PstNI CAGNNNCTG 1 cut(s) 1199
PsuI RGATCY 2 cut(s) 627, 1195
PvuI CGATCG 1 cut(s) 264
RsaI GTAC 6 cut(s) 45, 131, 161, 671, 824, 896
RsaNI GTAC 6 cut(s) 44, 130, 160, 670, 823, 895
RseI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
SaqAI TTAA 2 cut(s) 645, 852
SatI GCNGC 4 cut(s) 171, 174, 177, 323
Sau96I GGNCC 2 cut(s) 206, 411
ScrFI CCNGG 5 cut(s) 205, 250, 278, 311, 918
SduI GDGCHC 7 cut(s) 462, 537, 889, 915, 925, 931, 996
SfaNI GCATC 2 cut(s) 964, 1219
SfoI GGCGCC 1 cut(s) 220
SinI GGWCC 1 cut(s) 411
SmiMI CAYNNNNRTG 7 cut(s) 149, 393, 419, 482, 969, 1227, 1238
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 4 cut(s) 242, 642, 1302, 1324
SsiI CCGC 6 cut(s) 110, 118, 168, 171, 177, 323
SspDI GGCGCC 1 cut(s) 218
SspMI CTAG 3 cut(s) 87, 890, 1248
StyD4I CCNGG 5 cut(s) 203, 248, 276, 309, 916
StyI CCWWGG 2 cut(s) 86, 222
TaaI ACNGT 5 cut(s) 484, 724, 899, 955, 1240
TaiI ACGT 1 cut(s) 525
TaqI TCGA 4 cut(s) 260, 297, 359, 1005
TasI AATT 4 cut(s) 242, 642, 1302, 1324
TatI WGTACW 1 cut(s) 822
TauI GCSGC 3 cut(s) 173, 179, 325
Tru1I TTAA 2 cut(s) 645, 852
Tru9I TTAA 2 cut(s) 645, 852
TscAI CASTG 1 cut(s) 487
TseFI GTSAC 2 cut(s) 195, 1259
TseI GCWGC 1 cut(s) 173
Tsp45I GTSAC 2 cut(s) 195, 1259
TspDTI ATGAA 3 cut(s) 533, 572, 920
TspGWI ACGGA 4 cut(s) 45, 657, 766, 959
TspRI CASTG 1 cut(s) 487
VpaK11BI GGWCC 1 cut(s) 411
XapI RAATTY 1 cut(s) 242
XbaI TCTAGA 1 cut(s) 1247
XceI RCATGY 1 cut(s) 1297
XmaJI CCTAGG 1 cut(s) 86
XmiI GTMKAC 1 cut(s) 500
XspI CTAG 3 cut(s) 87, 890, 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.