Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000888.1

Orthogroup ID

OG0001956

Physical Location & Seq

Genomic Coordinates Reverse (-)

52578 .. 55706

Gene Structure 3129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000888.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

atgtcctcctcccgcaagctcctctccaccctcctccgcacctccctccgccgcacctcctcctcctcctcctccgccgccgccaggcccgcactctccagatcccccatcacgcgctcccccggctacctcctctcacgcgccgctcactactccacctcctccgccgccgccgtctccgcgcctccgaaatccggcacgccgtccacgaccggcaagatcaccgatgagttcaccggcaaaggctccatcggccaggtctgccaggtcatcggcgccgtcgtcgatgtccggttccaggatggcttgccgccgatcctgacggcgctcgaggttctggataactcgatccgattggtgctcgaggtggctcagcatctcggtgagaacatggtgaggactatcgccatggatgggactgaagggctcgttagaggtcaacgagtcctcaacactggctctcctatcactgttcctgttggaagagcaaccctgggccgaattatgaatgttatcggagagcctattgatcacaggggtgaactaaagaccgatcactgtctgcccatccatagagaagcgccggcctttgttgagcaggctactgagcaacagattcttgtcactggaatcaaggttgttgatcttcttgctccttaccaaagaggaggaaagattgggctctttggtggagctggtgttggcaagactgtgcttattatggaacttatcaacaatgttgccaaagctcatggtggtttctctgtgtttgctggtgtgggagaacgtacgagagagggtaatgatttataccgagaaatgattgaaagtggagtcattaagcttggagaaaagcagagtgatagtaagtgtgctcttgtatatggtcaaatgaatgaacctcctggtgcccgtgctcgtgttgggctcactggcttgactgtggctgagcatttccgtgatgctgaagggcaagatgtgcttctcttcattgataacatattccgctttactcaagctaactcagaagtgtctgctttgcttggtcgtatcccatctgctgtcggttaccaacctacgttagctactgatcttggaggacttcaagagcgtattactacaaccaagaagggttctattacgtctgttcaagctatttacgtacctgctgatgacttgacagatccggctcctgcaaccacttttgcccatcttgatgccaccactgtactgtcacgacaaatatctgagcttggaatctatcctgcggttgaccccttggattctacatctcgcatgctctcgcctcatattctaggagaagaacactacaacactgctcgtggtgttcagaaagttcttcaaaactataagaatctgcaagatattattgcaattttggggatggatgagcttagtgaagatgacaaattgactgttgctcgtgctcgtaaaattcaacggttcttgagccaacctttccatgtggcagaagtgttcacgggagctcctggaaaatatgtggagttgaaagagagcattaccagtttccagggagttctggatgggaaatatgatgatctttctgagcaatcgttctatatggttggtggaattgaagaagtcattgctaaggcagagaagattgccaaggaaaatgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0017076 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019866 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0034220 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046034 GO:0046390 GO:0046483 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0097159 GO:0097367 GO:0098655 GO:0098660 GO:0098662 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map01100 map04714 map05010 map05012 map05016

Pfam Domains

Protein Families

ATP-synt_ab ATP-synt_ab_N Synthase_beta

Protein Analysis

554

Amino Acids

59.42

Weight (kDa)

6.3

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08670 AT5G08680 AT5G08690
fragaria_vesca	FvH4_4g26290 FvH4_5g16960 FvH4_5g16960 FvH4_5g16960 FvH4_5g16960 FvH4_5g16960
malus_domestica	MD06G1223200.v1.1 MD13G1031500.v1.1 MD16G1033600.v1.1
prunus_persica	Prupe.1G320700_v2.0.a1 Prupe.5G228300_v2.0.a1
pyrus_communis	pycom06g19890 pycom13g02750 pycom16g02820
rosa_chinensis	RchiOBHm_Chr4g0433891 RchiOBHm_Chr7g0179061
rosa_laevigata	RLG00000005389 RLG00000006719
rosa_multiflora	Rmu_sc0000580.1_g000121 Rmu_sc0000888.1_g000014 Rmu_sc0026034.1_g000001 Rmu_ssc0000467.1_g000038
rosa_roxburghii	Rroxscaffold_3G00274430 Rroxscaffold_5G00375290
rosa_rugosa	Rorug04G0272100 Rorug06G0420600
rosa_samantha	Rh4AG326900 Rh4BG334400 Rh4CG350100 Rh4DG331100 Rh5AG180000 Rh5AG520200 Rh7AG020000 Rh7AG221100 Rh7BG019700 Rh7CG020900 Rh7DG020400 Rh7DG020500
rosa_wichuraiana	Rw2G024880 Rw4G028340 Rw6G005660 Rw7G001660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1174
AccB1I	GGYRCC	2 cut(s)	275, 908
AccBSI	CCGCTC	1 cut(s)	146
AccII	CGCG	3 cut(s)	115, 141, 182
AclWI	GGATC	4 cut(s)	96, 310, 343, 1178
AcoI	YGGCCR	1 cut(s)	253
AcsI	RAATTY	1 cut(s)	1455
AcuI	CTGAAG	2 cut(s)	441, 987
AcyI	GRCGYC	1 cut(s)	276
AfaI	GTAC	3 cut(s)	790, 1164, 1230
AfiI	CCNNNNNNNGG	4 cut(s)	84, 194, 298, 414
AgsI	TTSAA	7 cut(s)	827, 1106, 1151, 1364, 1460, 1531, 1619
AjnI	CCWGG	8 cut(s)	83, 255, 264, 297, 492, 904, 1510, 1551
AleI	CACNNNNGTG	1 cut(s)	537
Alw21I	GWGCWC	5 cut(s)	363, 877, 919, 1450, 1510
Alw26I	GTCTC	1 cut(s)	181
AlwI	GGATC	4 cut(s)	96, 310, 343, 1178
Ama87I	CYCGRG	2 cut(s)	329, 362
AoxI	GGCC	4 cut(s)	86, 253, 496, 585
ApoI	RAATTY	1 cut(s)	1455
AspLEI	GCGC	6 cut(s)	117, 143, 184, 278, 328, 583
AspS9I	GGNCC	2 cut(s)	87, 496
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	5 cut(s)	214, 226, 395, 406, 551
AvaI	CYCGRG	2 cut(s)	329, 362
BaeGI	GKGCMC	1 cut(s)	913
BanI	GGYRCC	2 cut(s)	275, 908
BanII	GRGCYC	4 cut(s)	429, 684, 930, 1510
BauI	CACGAG	3 cut(s)	918, 1341, 1443
Bbv12I	GWGCWC	5 cut(s)	363, 877, 919, 1450, 1510
BccI	CCATC	9 cut(s)	116, 257, 296, 407, 575, 1063, 1218, 1399, 1559
BceAI	ACGGC	4 cut(s)	158, 187, 263, 339
BciT130I	CCWGG	8 cut(s)	85, 257, 266, 299, 494, 906, 1512, 1553
BciVI	GTATCC	1 cut(s)	1061
BclI	TGATCA	1 cut(s)	529
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	1 cut(s)	181
BfaI	CTAG	1 cut(s)	1316
BfoI	RGCGCY	3 cut(s)	279, 329, 584
BfuAI	ACCTGC	1 cut(s)	1174
BfuI	GTATCC	1 cut(s)	1061
BisI	GCNGC	7 cut(s)	52, 78, 81, 144, 168, 171, 311
BlpI	GCTNAGC	2 cut(s)	372, 948
BlsI	GCNGC	7 cut(s)	53, 79, 82, 145, 169, 172, 312
Bme1390I	CCNGG	9 cut(s)	85, 123, 257, 266, 299, 494, 906, 1512, 1553
BmeT110I	CYCGRG	2 cut(s)	329, 362
BmgT120I	GGNCC	2 cut(s)	87, 496
BmiI	GGNNCC	5 cut(s)	247, 277, 296, 910, 1191
BmrFI	CCNGG	9 cut(s)	85, 123, 257, 266, 299, 494, 906, 1512, 1553
BmsI	GCATC	3 cut(s)	385, 952, 1207
BpmI	CTGGAG	1 cut(s)	82
Bpu10I	CCTNAGC	1 cut(s)	1632
Bpu1102I	GCTNAGC	2 cut(s)	372, 948
BpuEI	CTTGAG	2 cut(s)	999, 1489
BpuMI	CCSGG	1 cut(s)	123
BsaAI	YACGTR	1 cut(s)	1162
BsaHI	GRCGYC	1 cut(s)	276
BsaJI	CCNNGG	7 cut(s)	121, 408, 492, 493, 1278, 1552, 1650
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	8 cut(s)	143, 173, 445, 475, 684, 714, 1492, 1522
Bsc4I	CCNNNNNNNGG	4 cut(s)	84, 194, 298, 414
Bse118I	RCCGGY	3 cut(s)	212, 236, 583
Bse1I	ACTGG	4 cut(s)	460, 631, 937, 1545
Bse3DI	GCAATG	1 cut(s)	1626
BseBI	CCWGG	8 cut(s)	85, 257, 266, 299, 494, 906, 1512, 1553
BseDI	CCNNGG	7 cut(s)	121, 408, 492, 493, 1278, 1552, 1650
BseGI	GGATG	6 cut(s)	307, 418, 567, 1410, 1414, 1570
BseLI	CCNNNNNNNGG	4 cut(s)	84, 194, 298, 414
BseMI	GCAATG	1 cut(s)	1626
BseMII	CTCAG	6 cut(s)	386, 597, 939, 1038, 1239, 1578
BseNI	ACTGG	4 cut(s)	460, 631, 937, 1545
BseSI	GKGCMC	1 cut(s)	913
Bsh1236I	CGCG	3 cut(s)	115, 141, 182
Bsh1285I	CGRYCG	1 cut(s)	213
BshFI	GGCC	4 cut(s)	88, 255, 498, 587
BshNI	GGYRCC	2 cut(s)	275, 908
BsiEI	CGRYCG	1 cut(s)	213
BsiHKAI	GWGCWC	5 cut(s)	363, 877, 919, 1450, 1510
BsiHKCI	CYCGRG	2 cut(s)	329, 362
BsiSI	CCGG	7 cut(s)	123, 195, 213, 237, 292, 584, 1187
BsiWI	CGTACG	1 cut(s)	788
BslFI	GGGAC	1 cut(s)	430
BslI	CCNNNNNNNGG	4 cut(s)	84, 194, 298, 414
BsmAI	GTCTC	1 cut(s)	181
BsmBI	CGTCTC	1 cut(s)	181
BsmFI	GGGAC	1 cut(s)	430
BsnI	GGCC	4 cut(s)	88, 255, 498, 587
BsoBI	CYCGRG	2 cut(s)	329, 362
Bsp1286I	GDGCHC	9 cut(s)	363, 429, 684, 877, 913, 919, 930, 1450, 1510
Bsp1720I	GCTNAGC	2 cut(s)	372, 948
Bsp19I	CCATGG	1 cut(s)	408
BspANI	GGCC	4 cut(s)	88, 255, 498, 587
BspCNI	CTCAG	6 cut(s)	385, 598, 940, 1037, 1240, 1579
BspFNI	CGCG	3 cut(s)	115, 141, 182
BspLI	GGNNCC	5 cut(s)	247, 277, 296, 910, 1191
BspMI	ACCTGC	1 cut(s)	1174
BspPI	GGATC	4 cut(s)	96, 310, 343, 1178
BspQI	GCTCTTC	1 cut(s)	478
BspT107I	GGYRCC	2 cut(s)	275, 908
BsrBI	CCGCTC	1 cut(s)	146
BsrDI	GCAATG	1 cut(s)	1626
BsrFI	RCCGGY	3 cut(s)	212, 236, 583
BsrI	ACTGG	4 cut(s)	460, 631, 937, 1545
BssAI	RCCGGY	3 cut(s)	212, 236, 583
BssECI	CCNNGG	7 cut(s)	121, 408, 492, 493, 1278, 1552, 1650
BssNI	GRCGYC	1 cut(s)	276
BssSI	CACGAG	3 cut(s)	918, 1341, 1443
BssT1I	CCWWGG	3 cut(s)	408, 1278, 1650
Bst2BI	CACGAG	3 cut(s)	918, 1341, 1443
Bst2UI	CCWGG	8 cut(s)	85, 257, 266, 299, 494, 906, 1512, 1553
Bst4CI	ACNGT	8 cut(s)	472, 560, 712, 943, 1228, 1233, 1438, 1464
Bst6I	CTCTTC	2 cut(s)	478, 992
BstACI	GRCGYC	1 cut(s)	276
BstAPI	GCANNNNNTGC	1 cut(s)	979
BstBAI	YACGTR	1 cut(s)	1162
BstC8I	GCNNGC	7 cut(s)	17, 90, 200, 308, 585, 600, 1298
BstDEI	CTNAG	9 cut(s)	372, 606, 948, 1024, 1248, 1415, 1587, 1632, 1662
BstDSI	CCRYGG	1 cut(s)	408
BstEII	GGTNACC	1 cut(s)	1067
BstF5I	GGATG	6 cut(s)	307, 418, 567, 1410, 1414, 1570
BstFNI	CGCG	3 cut(s)	115, 141, 182
BstH2I	RGCGCY	3 cut(s)	279, 329, 584
BstHHI	GCGC	6 cut(s)	117, 143, 184, 278, 328, 583
BstMAI	GTCTC	1 cut(s)	181
BstMCI	CGRYCG	1 cut(s)	213
BstMWI	GCNNNNNNNGC	6 cut(s)	89, 123, 179, 252, 261, 979
BstNI	CCWGG	8 cut(s)	85, 257, 266, 299, 494, 906, 1512, 1553
BstNSI	RCATGY	1 cut(s)	1300
BstPI	GGTNACC	1 cut(s)	1067
BstSCI	CCNGG	9 cut(s)	83, 121, 255, 264, 297, 492, 904, 1510, 1551
BstSLI	GKGCMC	1 cut(s)	913
BstSNI	TACGTA	1 cut(s)	1162
BstUI	CGCG	3 cut(s)	115, 141, 182
BstX2I	RGATCY	2 cut(s)	101, 1183
BstYI	RGATCY	2 cut(s)	101, 1183
BsuI	GTATCC	1 cut(s)	1061
BsuRI	GGCC	4 cut(s)	88, 255, 498, 587
BtgI	CCRYGG	1 cut(s)	408
BtsCI	GGATG	6 cut(s)	307, 418, 567, 1410, 1414, 1570
BtsI	GCAGTG	1 cut(s)	1335
BtsIMutI	CAGTG	7 cut(s)	453, 468, 556, 624, 930, 1224, 1335
BveI	ACCTGC	1 cut(s)	1174
Cac8I	GCNNGC	7 cut(s)	17, 90, 200, 308, 585, 600, 1298
CfoI	GCGC	6 cut(s)	117, 143, 184, 278, 328, 583
Cfr10I	RCCGGY	3 cut(s)	212, 236, 583
Cfr13I	GGNCC	2 cut(s)	87, 496
Csp6I	GTAC	3 cut(s)	789, 1163, 1229
CviAII	CATG	5 cut(s)	391, 409, 752, 1297, 1484
CviQI	GTAC	3 cut(s)	789, 1163, 1229
DdeI	CTNAG	9 cut(s)	372, 606, 948, 1024, 1248, 1415, 1587, 1632, 1662
DinI	GGCGCC	1 cut(s)	277
EaeI	YGGCCR	1 cut(s)	253
Eam1104I	CTCTTC	2 cut(s)	478, 992
EarI	CTCTTC	2 cut(s)	478, 992
EciI	GGCGGA	3 cut(s)	38, 64, 154
Ecl136II	GAGCTC	1 cut(s)	1508
Eco105I	TACGTA	1 cut(s)	1162
Eco130I	CCWWGG	3 cut(s)	408, 1278, 1650
Eco24I	GRGCYC	4 cut(s)	429, 684, 930, 1510
Eco53kI	GAGCTC	1 cut(s)	1508
Eco57I	CTGAAG	2 cut(s)	441, 987
Eco88I	CYCGRG	2 cut(s)	329, 362
Eco91I	GGTNACC	1 cut(s)	1067
EcoICRI	GAGCTC	1 cut(s)	1508
EcoO65I	GGTNACC	1 cut(s)	1067
EcoRII	CCWGG	8 cut(s)	83, 255, 264, 297, 492, 904, 1510, 1551
EcoT14I	CCWWGG	3 cut(s)	408, 1278, 1650
EcoT38I	GRGCYC	4 cut(s)	429, 684, 930, 1510
EgeI	GGCGCC	1 cut(s)	277
EheI	GGCGCC	1 cut(s)	277
ErhI	CCWWGG	3 cut(s)	408, 1278, 1650
Esp3I	CGTCTC	1 cut(s)	181
FaeI	CATG	5 cut(s)	394, 412, 755, 1300, 1487
FalI	AAGNNNNNCTT	2 cut(s)	966, 998
FaqI	GGGAC	1 cut(s)	430
FatI	CATG	5 cut(s)	390, 408, 751, 1296, 1483
FauI	CCCGC	2 cut(s)	20, 97
FbaI	TGATCA	1 cut(s)	529
Fnu4HI	GCNGC	7 cut(s)	52, 78, 81, 144, 168, 171, 311
FokI	GGATG	6 cut(s)	314, 425, 554, 1417, 1421, 1577
FriOI	GRGCYC	4 cut(s)	429, 684, 930, 1510
Fsp4HI	GCNGC	7 cut(s)	52, 78, 81, 144, 168, 171, 311
FspBI	CTAG	1 cut(s)	1316
GlaI	GCGC	6 cut(s)	116, 142, 183, 277, 327, 582
GluI	GCNGC	7 cut(s)	52, 78, 81, 144, 168, 171, 311
GsuI	CTGGAG	1 cut(s)	82
HaeII	RGCGCY	3 cut(s)	279, 329, 584
HaeIII	GGCC	4 cut(s)	88, 255, 498, 587
HapII	CCGG	7 cut(s)	123, 195, 213, 237, 292, 584, 1187
HhaI	GCGC	6 cut(s)	117, 143, 184, 278, 328, 583
Hin1I	GRCGYC	1 cut(s)	276
Hin1II	CATG	5 cut(s)	394, 412, 755, 1300, 1487
Hin6I	GCGC	6 cut(s)	115, 141, 182, 276, 326, 581
HinP1I	GCGC	6 cut(s)	115, 141, 182, 276, 326, 581
HincII	GTYRAC	2 cut(s)	440, 1273
HindII	GTYRAC	2 cut(s)	440, 1273
HindIII	AAGCTT	1 cut(s)	842
HinfI	GANTC	7 cut(s)	444, 616, 630, 834, 1257, 1283, 1375
HpaII	CCGG	7 cut(s)	123, 195, 213, 237, 292, 584, 1187
HphI	GGTGA	5 cut(s)	214, 226, 395, 406, 551
Hpy166II	GTNNAC	6 cut(s)	207, 234, 440, 542, 1273, 1500
Hpy188I	TCNGA	7 cut(s)	189, 353, 518, 1027, 1249, 1353, 1588
Hpy188III	TCNNGA	8 cut(s)	99, 319, 338, 1106, 1214, 1236, 1468, 1562
Hpy8I	GTNNAC	6 cut(s)	207, 234, 440, 542, 1273, 1500
Hpy99I	CGWCG	2 cut(s)	284, 287
HpyAV	CCTTC	3 cut(s)	416, 962, 1123
HpyCH4III	ACNGT	8 cut(s)	472, 560, 712, 943, 1228, 1233, 1438, 1464
HpyCH4IV	ACGT	4 cut(s)	787, 1079, 1142, 1161
HpyCH4V	TGCA	3 cut(s)	1196, 1381, 1394
HpyF10VI	GCNNNNNNNGC	6 cut(s)	89, 123, 179, 252, 261, 979
HpyF3I	CTNAG	9 cut(s)	372, 606, 948, 1024, 1248, 1415, 1587, 1632, 1662
HpySE526I	ACGT	4 cut(s)	787, 1079, 1142, 1161
Hsp92I	GRCGYC	1 cut(s)	276
Hsp92II	CATG	5 cut(s)	394, 412, 755, 1300, 1487
HspAI	GCGC	6 cut(s)	115, 141, 182, 276, 326, 581
KasI	GGCGCC	1 cut(s)	275
KroI	GCCGGC	1 cut(s)	583
KroNI	GCCGGC	1 cut(s)	585
Ksp22I	TGATCA	1 cut(s)	529
LguI	GCTCTTC	1 cut(s)	478
LmnI	GCTCC	8 cut(s)	24, 122, 251, 658, 692, 1195, 1505, 1513
LweI	GCATC	3 cut(s)	385, 952, 1207
MaeI	CTAG	1 cut(s)	1316
MaeII	ACGT	4 cut(s)	787, 1079, 1142, 1161
MaeIII	GTNAC	3 cut(s)	622, 1067, 1233
MbiI	CCGCTC	1 cut(s)	146
MboII	GAAGA	8 cut(s)	495, 638, 979, 1334, 1352, 1433, 1631, 1654
MflI	RGATCY	2 cut(s)	101, 1183
MhlI	GDGCHC	9 cut(s)	363, 429, 684, 877, 913, 919, 930, 1450, 1510
MluCI	AATT	5 cut(s)	501, 1395, 1430, 1455, 1614
Mly113I	GGCGCC	1 cut(s)	276
MlyI	GAGTC	2 cut(s)	453, 843
MmeI	TCCRAC	1 cut(s)	460
MroNI	GCCGGC	1 cut(s)	583
MseI	TTAA	1 cut(s)	840
MslI	CAYNNNNRTG	4 cut(s)	381, 537, 957, 1215
MspI	CCGG	7 cut(s)	123, 195, 213, 237, 292, 584, 1187
MspR9I	CCNGG	9 cut(s)	85, 123, 257, 266, 299, 494, 906, 1512, 1553
MvaI	CCWGG	8 cut(s)	85, 257, 266, 299, 494, 906, 1512, 1553
MvnI	CGCG	3 cut(s)	115, 141, 182
MwoI	GCNNNNNNNGC	6 cut(s)	89, 123, 179, 252, 261, 979
NaeI	GCCGGC	1 cut(s)	585
NarI	GGCGCC	1 cut(s)	276
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	1 cut(s)	408
NgoMIV	GCCGGC	1 cut(s)	583
NlaIII	CATG	5 cut(s)	394, 412, 755, 1300, 1487
NlaIV	GGNNCC	5 cut(s)	247, 277, 296, 910, 1191
NmuCI	GTSAC	2 cut(s)	622, 1233
NspI	RCATGY	1 cut(s)	1300
OliI	CACNNNNGTG	1 cut(s)	537
PaeI	GCATGC	1 cut(s)	1300
PaeR7I	CTCGAG	2 cut(s)	329, 362
PasI	CCCWGGG	1 cut(s)	493
PciSI	GCTCTTC	1 cut(s)	478
PcsI	WCGNNNNNNNCGW	2 cut(s)	206, 279
PdiI	GCCGGC	1 cut(s)	585
PfeI	GAWTC	5 cut(s)	616, 630, 1257, 1283, 1375
Pfl23II	CGTACG	1 cut(s)	788
PfoI	TCCNGGA	2 cut(s)	297, 1510
PkrI	GCNGC	7 cut(s)	53, 79, 82, 145, 169, 172, 312
PleI	GAGTC	2 cut(s)	452, 842
PluTI	GGCGCC	1 cut(s)	279
PpsI	GAGTC	2 cut(s)	452, 842
Ppu21I	YACGTR	1 cut(s)	1162
Psp124BI	GAGCTC	1 cut(s)	1510
Psp6I	CCWGG	8 cut(s)	83, 255, 264, 297, 492, 904, 1510, 1551
PspEI	GGTNACC	1 cut(s)	1067
PspGI	CCWGG	8 cut(s)	83, 255, 264, 297, 492, 904, 1510, 1551
PspLI	CGTACG	1 cut(s)	788
PspN4I	GGNNCC	5 cut(s)	247, 277, 296, 910, 1191
PspPI	GGNCC	2 cut(s)	87, 496
PspXI	VCTCGAGB	2 cut(s)	329, 362
PsuI	RGATCY	2 cut(s)	101, 1183
RsaI	GTAC	3 cut(s)	790, 1164, 1230
RsaNI	GTAC	3 cut(s)	789, 1163, 1229
RseI	CAYNNNNRTG	4 cut(s)	381, 537, 957, 1215
SacI	GAGCTC	1 cut(s)	1510
SapI	GCTCTTC	1 cut(s)	478
SaqAI	TTAA	1 cut(s)	840
SatI	GCNGC	7 cut(s)	52, 78, 81, 144, 168, 171, 311
Sau96I	GGNCC	2 cut(s)	87, 496
SchI	GAGTC	2 cut(s)	453, 843
ScrFI	CCNGG	9 cut(s)	85, 123, 257, 266, 299, 494, 906, 1512, 1553
SduI	GDGCHC	9 cut(s)	363, 429, 684, 877, 913, 919, 930, 1450, 1510
SfaNI	GCATC	3 cut(s)	385, 952, 1207
SfoI	GGCGCC	1 cut(s)	277
Sfr274I	CTCGAG	2 cut(s)	329, 362
SlaI	CTCGAG	2 cut(s)	329, 362
SmiMI	CAYNNNNRTG	4 cut(s)	381, 537, 957, 1215
SmlI	CTYRAG	4 cut(s)	329, 362, 1014, 1468
SmoI	CTYRAG	4 cut(s)	329, 362, 1014, 1468
SnaBI	TACGTA	1 cut(s)	1162
SphI	GCATGC	1 cut(s)	1300
Sse9I	AATT	5 cut(s)	501, 1395, 1430, 1455, 1614
SspDI	GGCGCC	1 cut(s)	275
SspMI	CTAG	1 cut(s)	1316
SstI	GAGCTC	1 cut(s)	1510
StyD4I	CCNGG	9 cut(s)	83, 121, 255, 264, 297, 492, 904, 1510, 1551
StyI	CCWWGG	3 cut(s)	408, 1278, 1650
TaaI	ACNGT	8 cut(s)	472, 560, 712, 943, 1228, 1233, 1438, 1464
TaiI	ACGT	4 cut(s)	790, 1082, 1145, 1164
TaqI	TCGA	4 cut(s)	285, 330, 347, 363
TaqII	GACCGA	1 cut(s)	566
TasI	AATT	5 cut(s)	501, 1395, 1430, 1455, 1614
TatI	WGTACW	1 cut(s)	1228
TauI	GCSGC	7 cut(s)	54, 80, 83, 146, 170, 173, 313
TfiI	GAWTC	5 cut(s)	616, 630, 1257, 1283, 1375
Tru1I	TTAA	1 cut(s)	840
Tru9I	TTAA	1 cut(s)	840
TscAI	CASTG	7 cut(s)	460, 475, 563, 631, 937, 1231, 1342
TseFI	GTSAC	2 cut(s)	622, 1233
Tsp45I	GTSAC	2 cut(s)	622, 1233
TspDTI	ATGAA	4 cut(s)	521, 908, 912, 979
TspGWI	ACGGA	1 cut(s)	947
TspRI	CASTG	7 cut(s)	460, 475, 563, 631, 937, 1231, 1342
XapI	RAATTY	1 cut(s)	1455
XceI	RCATGY	1 cut(s)	1300
XhoI	CTCGAG	2 cut(s)	329, 362
XspI	CTAG	1 cut(s)	1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.