Rroxscaffold_3G00274430

Produces ATP from ADP in the presence of a proton gradient across the membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001956
Physical Location & Seq
Forward (+)
66102459 .. 66106045
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00274430.1

Sequence Viewer

Length: 1449 bp
ATGTCCTCCTCCCGCAAGCTCCTCTCCACCCTCCTCCGCACCTCCCTCCGTCGCACCTCCTCCTCCTCCTCCTCCTCCTCCGCGGCCGCCAGGCCCGCACTCTCCAGATCCCCCATCACGCGCTCCCCCGGCTACCTCCTCTCACGCGCCGCTCACTACTCCACCTCCTCCGCCGCCGCCGTCTCCGCGCCTCCGAAATCCGGCACGCCGTCCACGACCGGCAAGATCACCGATGAGTTCACCGGCAAAGGCTCCATCGGCCAGGTCTGCCAGGTCATCGGCGCCGTCGTCGATGTCCGGTTCCAGGACGGCTTGCCGCCGATCCTGACGGCGCTCGAGGTTCTGGATAACTCGATCCGATTGGTCCTCGAGGTGGCCCAGCATCTCGGTGAGAACATGGTGAGGACTATCGCCATGGATGGGACTGAAGGGCTCGTTAGAGGTCAACGAGTCCTCAACACTGGCTCTCCTATCACTGTGCCTGTTGGAAGAGCAACCCTGGGCCGAATTATGAATGTTATCGGAGAGCCTATTGATCACAGGGGTGAACTAAAGACCGATCACTCTCTGCCCATCCATAGAGAAGCGCCGGCCTTTGTTGAGCAGGCTACTGAGCAACAGATTCTTGTCACTGGAATCAAGAGTGATAGCAAGTGTGCTCTTGTATATGGTCAAATGAACGAACCTCCTGGTGCCCGTGCTCGTGTTGGGCTCACTGGCTTGACTGTGGCTGAGCATTTCCGTGATGCTGAAGGGCAAGATGTGCTTCTCTTCATTGATAACATATTCCGCTTTACTCAAGCTAACTCAGAAGTGTCTGCTTTGCTTGGTCGTATCCCATCTGCTGTGGGTTACCAACCTACGTTAGCTACTGATCTTGGAGGACTTCAAGAGCGTATTACTACAACCAAGAAGGGTTCTATTACGTCTGTTCAAGCTATTTACGTACCTGCTGATGACTTGACAGATCCGGCTCCTGCAACCACTTTTGCCCATCTTGATGCCACCACTGTGCTGTCACGACAAATATCTGAGCTTGGAATCTATCCTGCGGTTGACCCCTTGGATTCTACATCTCGCATGCTCTCGCCTCATATTCTAGGAGAAGAACACTACAACACTGCTCGTGGTGTTCAGAAAGTTCTTCAAAACTATAAGAATCTGCAAGATATTATTGCAATTTTGGGGATGGATGAGCTTAGTGAAGATGACAAATTGACTGTTGCTCGTGCTCGTAAGATTCAACGGTTCTTGAGCCAACCTTTCCATGTGGCAGAAGTGTTCACGGGAGCTCCTGGAAAATATGTGGAGTTGAAAGAGAGCATTACCAGTTTCCAGGGAGTTCTGGATGGGAAATATGATGATCTTCCTGAGCAATCGTTCTATATGGTTGGTGGAATTGAAGAAGTCATTGCTAAGGCAGAGAAGATTGCCAAGGAAAATGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0017076 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019866 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0034220 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046034 GO:0046390 GO:0046483 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0097159 GO:0097367 GO:0098655 GO:0098660 GO:0098662 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map01100 map04714 map05010 map05012 map05016
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N Synthase_beta

Protein Analysis

482

Amino Acids

51.77

Weight (kDa)

6.1

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab_N PF02874 89 - 155 4.7e-17 ATP synthase alpha/beta family, beta-barrel domain
ATP-synt_ab PF00006 215 - 359 5.9e-48 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_VA_C PF22919 366 - 440 3.8e-15 C-terminal domain of V and A type ATP synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 368
Acc36I ACCTGC 1 cut(s) 958
AccB1I GGYRCC 2 cut(s) 281, 692
AccBSI CCGCTC 1 cut(s) 152
AccII CGCG 4 cut(s) 83, 121, 147, 188
AclWI GGATC 4 cut(s) 102, 316, 349, 962
AcoI YGGCCR 2 cut(s) 84, 259
AcuI CTGAAG 2 cut(s) 447, 771
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 1 cut(s) 948
AfiI CCNNNNNNNGG 4 cut(s) 200, 304, 373, 420
AgsI TTSAA 6 cut(s) 890, 935, 1148, 1244, 1315, 1403
AjnI CCWGG 8 cut(s) 89, 261, 270, 303, 498, 688, 1294, 1335
AleI CACNNNNGTG 2 cut(s) 543, 1010
AluBI AGCT 7 cut(s) 19, 803, 869, 938, 1036, 1198, 1292
AluI AGCT 7 cut(s) 19, 803, 869, 938, 1036, 1198, 1292
Alw21I GWGCWC 4 cut(s) 661, 703, 1234, 1294
Alw26I GTCTC 1 cut(s) 187
AlwI GGATC 4 cut(s) 102, 316, 349, 962
Ama87I CYCGRG 2 cut(s) 335, 368
AoxI GGCC 6 cut(s) 84, 92, 259, 375, 502, 591
AspLEI GCGC 6 cut(s) 123, 149, 190, 284, 334, 589
AspS9I GGNCC 4 cut(s) 93, 364, 376, 502
AsuC2I CCSGG 1 cut(s) 129
AsuHPI GGTGA 5 cut(s) 220, 232, 401, 412, 557
AvaI CYCGRG 2 cut(s) 335, 368
AvaII GGWCC 1 cut(s) 364
BaeGI GKGCMC 1 cut(s) 697
BanI GGYRCC 2 cut(s) 281, 692
BanII GRGCYC 3 cut(s) 435, 714, 1294
BauI CACGAG 3 cut(s) 702, 1125, 1227
Bbv12I GWGCWC 4 cut(s) 661, 703, 1234, 1294
BccI CCATC 8 cut(s) 122, 263, 413, 581, 847, 1002, 1183, 1343
BceAI ACGGC 5 cut(s) 164, 193, 269, 325, 345
BciT130I CCWGG 8 cut(s) 91, 263, 272, 305, 500, 690, 1296, 1337
BciVI GTATCC 1 cut(s) 845
BclI TGATCA 1 cut(s) 535
BcnI CCSGG 1 cut(s) 129
BcoDI GTCTC 1 cut(s) 187
BfaI CTAG 1 cut(s) 1100
BfoI RGCGCY 3 cut(s) 285, 335, 590
BfuAI ACCTGC 1 cut(s) 958
BfuI GTATCC 1 cut(s) 845
BisI GCNGC 6 cut(s) 84, 87, 150, 174, 177, 317
BlpI GCTNAGC 1 cut(s) 732
BlsI GCNGC 6 cut(s) 85, 88, 151, 175, 178, 318
Bme1390I CCNGG 9 cut(s) 91, 129, 263, 272, 305, 500, 690, 1296, 1337
Bme18I GGWCC 1 cut(s) 364
BmeT110I CYCGRG 2 cut(s) 335, 368
BmgT120I GGNCC 4 cut(s) 93, 364, 376, 502
BmiI GGNNCC 5 cut(s) 253, 283, 302, 694, 975
BmrFI CCNGG 9 cut(s) 91, 129, 263, 272, 305, 500, 690, 1296, 1337
BmsI GCATC 3 cut(s) 391, 736, 991
BpmI CTGGAG 1 cut(s) 88
Bpu10I CCTNAGC 2 cut(s) 1371, 1416
Bpu1102I GCTNAGC 1 cut(s) 732
BpuEI CTTGAG 2 cut(s) 783, 1273
BpuMI CCSGG 1 cut(s) 129
BsaAI YACGTR 1 cut(s) 946
BsaHI GRCGYC 1 cut(s) 282
BsaJI CCNNGG 8 cut(s) 81, 127, 414, 498, 499, 1062, 1336, 1434
BsaWI WCCGGW 1 cut(s) 297
BsaXI ACNNNNNCTCC 6 cut(s) 149, 179, 451, 481, 1276, 1306
Bsc4I CCNNNNNNNGG 4 cut(s) 200, 304, 373, 420
Bse118I RCCGGY 3 cut(s) 218, 242, 589
Bse1I ACTGG 4 cut(s) 466, 637, 721, 1329
Bse3DI GCAATG 1 cut(s) 1410
BseBI CCWGG 8 cut(s) 91, 263, 272, 305, 500, 690, 1296, 1337
BseDI CCNNGG 8 cut(s) 81, 127, 414, 498, 499, 1062, 1336, 1434
BseGI GGATG 5 cut(s) 424, 573, 1194, 1198, 1354
BseLI CCNNNNNNNGG 4 cut(s) 200, 304, 373, 420
BseMI GCAATG 1 cut(s) 1410
BseMII CTCAG 5 cut(s) 603, 723, 822, 1023, 1362
BseNI ACTGG 4 cut(s) 466, 637, 721, 1329
BseSI GKGCMC 1 cut(s) 697
BseX3I CGGCCG 1 cut(s) 84
BseYI CCCAGC 1 cut(s) 378
Bsh1236I CGCG 4 cut(s) 83, 121, 147, 188
Bsh1285I CGRYCG 2 cut(s) 87, 219
BshFI GGCC 6 cut(s) 86, 94, 261, 377, 504, 593
BshNI GGYRCC 2 cut(s) 281, 692
BsiEI CGRYCG 2 cut(s) 87, 219
BsiHKAI GWGCWC 4 cut(s) 661, 703, 1234, 1294
BsiHKCI CYCGRG 2 cut(s) 335, 368
BsiSI CCGG 7 cut(s) 129, 201, 219, 243, 298, 590, 971
BslFI GGGAC 1 cut(s) 436
BslI CCNNNNNNNGG 4 cut(s) 200, 304, 373, 420
BsmAI GTCTC 1 cut(s) 187
BsmBI CGTCTC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 436
BsnI GGCC 6 cut(s) 86, 94, 261, 377, 504, 593
BsoBI CYCGRG 2 cut(s) 335, 368
Bsp1286I GDGCHC 7 cut(s) 435, 661, 697, 703, 714, 1234, 1294
Bsp143I GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
Bsp1720I GCTNAGC 1 cut(s) 732
Bsp19I CCATGG 1 cut(s) 414
BspANI GGCC 6 cut(s) 86, 94, 261, 377, 504, 593
BspCNI CTCAG 5 cut(s) 604, 724, 821, 1024, 1363
BspFNI CGCG 4 cut(s) 83, 121, 147, 188
BspLI GGNNCC 5 cut(s) 253, 283, 302, 694, 975
BspMI ACCTGC 1 cut(s) 958
BspPI GGATC 4 cut(s) 102, 316, 349, 962
BspQI GCTCTTC 1 cut(s) 484
BspT107I GGYRCC 2 cut(s) 281, 692
BsrBI CCGCTC 1 cut(s) 152
BsrDI GCAATG 1 cut(s) 1410
BsrFI RCCGGY 3 cut(s) 218, 242, 589
BsrI ACTGG 4 cut(s) 466, 637, 721, 1329
BssAI RCCGGY 3 cut(s) 218, 242, 589
BssECI CCNNGG 8 cut(s) 81, 127, 414, 498, 499, 1062, 1336, 1434
BssMI GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
BssNI GRCGYC 1 cut(s) 282
BssSI CACGAG 3 cut(s) 702, 1125, 1227
BssT1I CCWWGG 3 cut(s) 414, 1062, 1434
Bst2BI CACGAG 3 cut(s) 702, 1125, 1227
Bst2UI CCWGG 8 cut(s) 91, 263, 272, 305, 500, 690, 1296, 1337
Bst4CI ACNGT 5 cut(s) 478, 727, 1012, 1222, 1248
Bst6I CTCTTC 2 cut(s) 484, 776
BstACI GRCGYC 1 cut(s) 282
BstAPI GCANNNNNTGC 1 cut(s) 763
BstBAI YACGTR 1 cut(s) 946
BstC8I GCNNGC 7 cut(s) 17, 96, 206, 314, 591, 606, 1082
BstDEI CTNAG 8 cut(s) 612, 732, 808, 1032, 1199, 1371, 1416, 1446
BstDSI CCRYGG 2 cut(s) 81, 414
BstEII GGTNACC 1 cut(s) 851
BstF5I GGATG 5 cut(s) 424, 573, 1194, 1198, 1354
BstFNI CGCG 4 cut(s) 83, 121, 147, 188
BstH2I RGCGCY 3 cut(s) 285, 335, 590
BstHHI GCGC 6 cut(s) 123, 149, 190, 284, 334, 589
BstKTI GATC 9 cut(s) 110, 228, 324, 357, 538, 562, 877, 970, 1366
BstMAI GTCTC 1 cut(s) 187
BstMBI GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
BstMCI CGRYCG 2 cut(s) 87, 219
BstMWI GCNNNNNNNGC 6 cut(s) 95, 129, 185, 258, 267, 763
BstNI CCWGG 8 cut(s) 91, 263, 272, 305, 500, 690, 1296, 1337
BstNSI RCATGY 1 cut(s) 1084
BstPI GGTNACC 1 cut(s) 851
BstSCI CCNGG 9 cut(s) 89, 127, 261, 270, 303, 498, 688, 1294, 1335
BstSLI GKGCMC 1 cut(s) 697
BstSNI TACGTA 1 cut(s) 946
BstUI CGCG 4 cut(s) 83, 121, 147, 188
BstX2I RGATCY 2 cut(s) 107, 967
BstYI RGATCY 2 cut(s) 107, 967
BstZI CGGCCG 1 cut(s) 84
BsuI GTATCC 1 cut(s) 845
BsuRI GGCC 6 cut(s) 86, 94, 261, 377, 504, 593
BtgI CCRYGG 2 cut(s) 81, 414
BtsCI GGATG 5 cut(s) 424, 573, 1194, 1198, 1354
BtsI GCAGTG 1 cut(s) 1119
BtsIMutI CAGTG 6 cut(s) 459, 474, 630, 714, 1008, 1119
BveI ACCTGC 1 cut(s) 958
Cac8I GCNNGC 7 cut(s) 17, 96, 206, 314, 591, 606, 1082
CciNI GCGGCCGC 1 cut(s) 84
CfoI GCGC 6 cut(s) 123, 149, 190, 284, 334, 589
Cfr10I RCCGGY 3 cut(s) 218, 242, 589
Cfr13I GGNCC 4 cut(s) 93, 364, 376, 502
Cfr42I CCGCGG 1 cut(s) 84
Csp6I GTAC 1 cut(s) 947
CviAII CATG 4 cut(s) 397, 415, 1081, 1268
CviQI GTAC 1 cut(s) 947
DdeI CTNAG 8 cut(s) 612, 732, 808, 1032, 1199, 1371, 1416, 1446
DinI GGCGCC 1 cut(s) 283
DpnI GATC 9 cut(s) 109, 227, 323, 356, 537, 561, 876, 969, 1365
DpnII GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
EaeI YGGCCR 2 cut(s) 84, 259
EagI CGGCCG 1 cut(s) 84
Eam1104I CTCTTC 2 cut(s) 484, 776
EarI CTCTTC 2 cut(s) 484, 776
EciI GGCGGA 1 cut(s) 160
Ecl136II GAGCTC 1 cut(s) 1292
EclXI CGGCCG 1 cut(s) 84
Eco105I TACGTA 1 cut(s) 946
Eco130I CCWWGG 3 cut(s) 414, 1062, 1434
Eco24I GRGCYC 3 cut(s) 435, 714, 1294
Eco47I GGWCC 1 cut(s) 364
Eco52I CGGCCG 1 cut(s) 84
Eco53kI GAGCTC 1 cut(s) 1292
Eco57I CTGAAG 2 cut(s) 447, 771
Eco88I CYCGRG 2 cut(s) 335, 368
Eco91I GGTNACC 1 cut(s) 851
EcoICRI GAGCTC 1 cut(s) 1292
EcoO65I GGTNACC 1 cut(s) 851
EcoRII CCWGG 8 cut(s) 89, 261, 270, 303, 498, 688, 1294, 1335
EcoT14I CCWWGG 3 cut(s) 414, 1062, 1434
EcoT38I GRGCYC 3 cut(s) 435, 714, 1294
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 3 cut(s) 414, 1062, 1434
Esp3I CGTCTC 1 cut(s) 187
FaeI CATG 4 cut(s) 400, 418, 1084, 1271
FalI AAGNNNNNCTT 2 cut(s) 750, 782
FaqI GGGAC 1 cut(s) 436
FatI CATG 4 cut(s) 396, 414, 1080, 1267
FauI CCCGC 2 cut(s) 20, 103
FbaI TGATCA 1 cut(s) 535
Fnu4HI GCNGC 6 cut(s) 84, 87, 150, 174, 177, 317
FokI GGATG 5 cut(s) 431, 560, 1201, 1205, 1361
FriOI GRGCYC 3 cut(s) 435, 714, 1294
Fsp4HI GCNGC 6 cut(s) 84, 87, 150, 174, 177, 317
FspBI CTAG 1 cut(s) 1100
GlaI GCGC 6 cut(s) 122, 148, 189, 283, 333, 588
GluI GCNGC 6 cut(s) 84, 87, 150, 174, 177, 317
GsaI CCCAGC 1 cut(s) 382
GsuI CTGGAG 1 cut(s) 88
HaeII RGCGCY 3 cut(s) 285, 335, 590
HaeIII GGCC 6 cut(s) 86, 94, 261, 377, 504, 593
HapII CCGG 7 cut(s) 129, 201, 219, 243, 298, 590, 971
HhaI GCGC 6 cut(s) 123, 149, 190, 284, 334, 589
Hin1I GRCGYC 1 cut(s) 282
Hin1II CATG 4 cut(s) 400, 418, 1084, 1271
Hin6I GCGC 6 cut(s) 121, 147, 188, 282, 332, 587
HinP1I GCGC 6 cut(s) 121, 147, 188, 282, 332, 587
HincII GTYRAC 2 cut(s) 446, 1057
HindII GTYRAC 2 cut(s) 446, 1057
HinfI GANTC 7 cut(s) 450, 622, 636, 1041, 1067, 1159, 1240
HpaII CCGG 7 cut(s) 129, 201, 219, 243, 298, 590, 971
HphI GGTGA 5 cut(s) 220, 232, 401, 412, 557
Hpy166II GTNNAC 6 cut(s) 213, 240, 446, 548, 1057, 1284
Hpy188I TCNGA 6 cut(s) 195, 359, 524, 811, 1033, 1137
Hpy8I GTNNAC 6 cut(s) 213, 240, 446, 548, 1057, 1284
Hpy99I CGWCG 3 cut(s) 54, 290, 293
HpyAV CCTTC 3 cut(s) 422, 746, 907
HpyCH4III ACNGT 5 cut(s) 478, 727, 1012, 1222, 1248
HpyCH4IV ACGT 3 cut(s) 863, 926, 945
HpyCH4V TGCA 3 cut(s) 980, 1165, 1178
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 129, 185, 258, 267, 763
HpyF3I CTNAG 8 cut(s) 612, 732, 808, 1032, 1199, 1371, 1416, 1446
HpySE526I ACGT 3 cut(s) 863, 926, 945
Hsp92I GRCGYC 1 cut(s) 282
Hsp92II CATG 4 cut(s) 400, 418, 1084, 1271
HspAI GCGC 6 cut(s) 121, 147, 188, 282, 332, 587
KasI GGCGCC 1 cut(s) 281
KroI GCCGGC 1 cut(s) 589
KroNI GCCGGC 1 cut(s) 591
Ksp22I TGATCA 1 cut(s) 535
KspI CCGCGG 1 cut(s) 84
Kzo9I GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
LguI GCTCTTC 1 cut(s) 484
LmnI GCTCC 6 cut(s) 24, 128, 257, 979, 1289, 1297
LweI GCATC 3 cut(s) 391, 736, 991
MaeI CTAG 1 cut(s) 1100
MaeII ACGT 3 cut(s) 863, 926, 945
MaeIII GTNAC 3 cut(s) 628, 851, 1017
MalI GATC 9 cut(s) 109, 227, 323, 356, 537, 561, 876, 969, 1365
MbiI CCGCTC 1 cut(s) 152
MboI GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
MboII GAAGA 8 cut(s) 501, 763, 1118, 1136, 1217, 1358, 1415, 1438
MflI RGATCY 2 cut(s) 107, 967
MhlI GDGCHC 7 cut(s) 435, 661, 697, 703, 714, 1234, 1294
MluCI AATT 4 cut(s) 507, 1179, 1214, 1398
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 1 cut(s) 459
MmeI TCCRAC 1 cut(s) 466
MroNI GCCGGC 1 cut(s) 589
MslI CAYNNNNRTG 5 cut(s) 387, 543, 741, 999, 1010
MspA1I CMGCKG 1 cut(s) 83
MspI CCGG 7 cut(s) 129, 201, 219, 243, 298, 590, 971
MspR9I CCNGG 9 cut(s) 91, 129, 263, 272, 305, 500, 690, 1296, 1337
MvaI CCWGG 8 cut(s) 91, 263, 272, 305, 500, 690, 1296, 1337
MvnI CGCG 4 cut(s) 83, 121, 147, 188
MwoI GCNNNNNNNGC 6 cut(s) 95, 129, 185, 258, 267, 763
NaeI GCCGGC 1 cut(s) 591
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 1 cut(s) 129
NcoI CCATGG 1 cut(s) 414
NdeII GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
NgoMIV GCCGGC 1 cut(s) 589
NlaIII CATG 4 cut(s) 400, 418, 1084, 1271
NlaIV GGNNCC 5 cut(s) 253, 283, 302, 694, 975
NmuCI GTSAC 2 cut(s) 628, 1017
NotI GCGGCCGC 1 cut(s) 84
NspI RCATGY 1 cut(s) 1084
OliI CACNNNNGTG 2 cut(s) 543, 1010
PaeI GCATGC 1 cut(s) 1084
PaeR7I CTCGAG 2 cut(s) 335, 368
PasI CCCWGGG 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 484
PcsI WCGNNNNNNNCGW 2 cut(s) 212, 285
PdiI GCCGGC 1 cut(s) 591
PfeI GAWTC 6 cut(s) 622, 636, 1041, 1067, 1159, 1240
PfoI TCCNGGA 2 cut(s) 303, 1294
PkrI GCNGC 6 cut(s) 85, 88, 151, 175, 178, 318
PleI GAGTC 1 cut(s) 458
PluTI GGCGCC 1 cut(s) 285
PpsI GAGTC 1 cut(s) 458
Ppu21I YACGTR 1 cut(s) 946
Psp124BI GAGCTC 1 cut(s) 1294
Psp6I CCWGG 8 cut(s) 89, 261, 270, 303, 498, 688, 1294, 1335
PspEI GGTNACC 1 cut(s) 851
PspFI CCCAGC 1 cut(s) 378
PspGI CCWGG 8 cut(s) 89, 261, 270, 303, 498, 688, 1294, 1335
PspN4I GGNNCC 5 cut(s) 253, 283, 302, 694, 975
PspPI GGNCC 4 cut(s) 93, 364, 376, 502
PspXI VCTCGAGB 2 cut(s) 335, 368
PsuI RGATCY 2 cut(s) 107, 967
RsaI GTAC 1 cut(s) 948
RsaNI GTAC 1 cut(s) 947
RseI CAYNNNNRTG 5 cut(s) 387, 543, 741, 999, 1010
SacI GAGCTC 1 cut(s) 1294
SacII CCGCGG 1 cut(s) 84
SapI GCTCTTC 1 cut(s) 484
SatI GCNGC 6 cut(s) 84, 87, 150, 174, 177, 317
Sau3AI GATC 9 cut(s) 107, 225, 321, 354, 535, 559, 874, 967, 1363
Sau96I GGNCC 4 cut(s) 93, 364, 376, 502
SchI GAGTC 1 cut(s) 459
ScrFI CCNGG 9 cut(s) 91, 129, 263, 272, 305, 500, 690, 1296, 1337
SduI GDGCHC 7 cut(s) 435, 661, 697, 703, 714, 1234, 1294
SfaNI GCATC 3 cut(s) 391, 736, 991
SfoI GGCGCC 1 cut(s) 283
Sfr274I CTCGAG 2 cut(s) 335, 368
Sfr303I CCGCGG 1 cut(s) 84
SgrBI CCGCGG 1 cut(s) 84
SinI GGWCC 1 cut(s) 364
SlaI CTCGAG 2 cut(s) 335, 368
SmiMI CAYNNNNRTG 5 cut(s) 387, 543, 741, 999, 1010
SmlI CTYRAG 4 cut(s) 335, 368, 798, 1252
SmoI CTYRAG 4 cut(s) 335, 368, 798, 1252
SnaBI TACGTA 1 cut(s) 946
SphI GCATGC 1 cut(s) 1084
Sse9I AATT 4 cut(s) 507, 1179, 1214, 1398
SspDI GGCGCC 1 cut(s) 281
SspMI CTAG 1 cut(s) 1100
SstI GAGCTC 1 cut(s) 1294
StyD4I CCNGG 9 cut(s) 89, 127, 261, 270, 303, 498, 688, 1294, 1335
StyI CCWWGG 3 cut(s) 414, 1062, 1434
TaaI ACNGT 5 cut(s) 478, 727, 1012, 1222, 1248
TaiI ACGT 3 cut(s) 866, 929, 948
TaqI TCGA 4 cut(s) 291, 336, 353, 369
TaqII GACCGA 1 cut(s) 572
TasI AATT 4 cut(s) 507, 1179, 1214, 1398
TauI GCSGC 6 cut(s) 86, 89, 152, 176, 179, 319
TfiI GAWTC 6 cut(s) 622, 636, 1041, 1067, 1159, 1240
TscAI CASTG 6 cut(s) 466, 481, 637, 721, 1015, 1126
TseFI GTSAC 2 cut(s) 628, 1017
Tsp45I GTSAC 2 cut(s) 628, 1017
TspDTI ATGAA 3 cut(s) 527, 692, 763
TspGWI ACGGA 2 cut(s) 38, 731
TspRI CASTG 6 cut(s) 466, 481, 637, 721, 1015, 1126
VpaK11BI GGWCC 1 cut(s) 364
XceI RCATGY 1 cut(s) 1084
XhoI CTCGAG 2 cut(s) 335, 368
XspI CTAG 1 cut(s) 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.