Rh7AG221100

Produces ATP from ADP in the presence of a proton gradient across the membrane

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0001956
Physical Location & Seq
Reverse (-)
20571380 .. 20576548
5169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG221100.1

Sequence Viewer

Length: 909 bp
ATGAAGGCGCCGAATCTTCCCACCATTGGTCTGATCAGATCCAGGGAGGAGTGGCAGGCTGATTCCAATCAGTGTAATGTTCAAAATGAAAATGATATGGATGTTGTAAATGACGATGCGATCGATGAAAGTCCTGGCGAGCCTGAGCAGAAAAGACGGCGGCGAGGGCCTGGAGTGGCGGATGAGGGGAGATTGACGGAGGTCCCTATTTTGGAATATTCCGATATGGGAAAGGCTCTTAATTCTTCTCCGATGATTAGGCAATCATCCATTTCGCCCTCATTTAGTAGCCCTCCTCTAATTGTGGATCGTATTTCACGTGTGCATGATTCTCGGGTGGAGAGATGCCTATATGTTGGAAAGTCTCATGCTGATCTGGTTGTAGCGAGGTTGACATTGGAGGTTAATGATGGGATTGTGATTAAGGAAAATGGAGGAAAATTTTCGGAATCAAGTGTGAAGTCAGCAACAATGGGCCCGGACAAGTCCCTATCAGTCGCTAGGCCCAGCAGGTGTTCCACGATGCAAACTGAGAATGGGGTTAGTACCCAGGCCCAAACTAAACGTAGTCCAAATGGGGGTCAGAAGTGGACTGATCTGTCTCCTCCCAGTAGTAAACCCTCTGGGAAGGTTCCAGAATGTTCAAAAAGTATGGTGGTTTCTCCGTGTTTTCTGGTGTTGGAGAACGCACTCGTGAGGGCTAACTCTGAGGTGTCTGCTTTGCTTGGTCGTATCCCATCTGTCGTCGGATACCAACCTACTTTAGCTACTGATCTTGGAGGTCTTCAAGAGCGTATCACAACCACCAAGAAGGGTTCCATTACTTCTGTCCAAGCTATTTATGTGCCTGCTGATGACTTGACAGATCCTGCTCCTGCAACTACTTTTGCTCACTTGGATACCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0017076 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019866 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0034220 GO:0034641 GO:0034654 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046034 GO:0046390 GO:0046483 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0097159 GO:0097367 GO:0098655 GO:0098660 GO:0098662 GO:1901135 GO:1901137 GO:1901265 GO:1901293 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map01100 map04714 map05010 map05012 map05016
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N Synthase_beta

Protein Analysis

302

Amino Acids

32.51

Weight (kDa)

5.77

Isoelectric Point (pI)

53.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_ab PF00006 232 - 301 1.6e-17 ATP synthase alpha/beta family, nucleotide-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 501
AasI GACNNNNNNGTC 1 cut(s) 598
Acc36I ACCTGC 1 cut(s) 501
AccB1I GGYRCC 1 cut(s) 7
AciI CCGC 2 cut(s) 160, 179
AclWI GGATC 3 cut(s) 33, 315, 860
AcsI RAATTY 1 cut(s) 440
AcvI CACGTG 1 cut(s) 320
AcyI GRCGYC 1 cut(s) 8
AfaI GTAC 1 cut(s) 547
AfiI CCNNNNNNNGG 3 cut(s) 26, 211, 578
AflIII ACRYGT 1 cut(s) 319
AgsI TTSAA 3 cut(s) 83, 645, 788
AjnI CCWGG 4 cut(s) 41, 133, 169, 549
AluBI AGCT 3 cut(s) 767, 836, 906
AluI AGCT 3 cut(s) 767, 836, 906
Alw26I GTCTC 2 cut(s) 369, 606
AlwI GGATC 3 cut(s) 33, 315, 860
AlwNI CAGNNNCTG 1 cut(s) 869
Ama87I CYCGRG 1 cut(s) 333
AoxI GGCC 4 cut(s) 167, 475, 503, 552
ApaI GGGCCC 1 cut(s) 479
ApoI RAATTY 1 cut(s) 440
Asp700I GAANNNNTTC 1 cut(s) 442
AspLEI GCGC 1 cut(s) 10
AspS9I GGNCC 6 cut(s) 167, 202, 475, 476, 504, 553
AsuC2I CCSGG 1 cut(s) 479
AvaI CYCGRG 1 cut(s) 333
AvaII GGWCC 1 cut(s) 202
BaeGI GKGCMC 1 cut(s) 479
BanI GGYRCC 1 cut(s) 7
BanII GRGCYC 1 cut(s) 479
BauI CACGAG 1 cut(s) 692
BbrPI CACGTG 1 cut(s) 320
BbsI GAAGAC 1 cut(s) 776
BccI CCATC 2 cut(s) 404, 745
BceAI ACGGC 1 cut(s) 173
BcgI CGANNNNNNTGC 2 cut(s) 314, 348
BciT130I CCWGG 4 cut(s) 43, 135, 171, 551
BciVI GTATCC 3 cut(s) 743, 743, 892
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 1 cut(s) 479
BcoDI GTCTC 2 cut(s) 369, 606
BfaI CTAG 1 cut(s) 501
BfoI RGCGCY 1 cut(s) 11
BfuAI ACCTGC 1 cut(s) 501
BfuI GTATCC 3 cut(s) 743, 743, 892
BisI GCNGC 1 cut(s) 161
BlsI GCNGC 1 cut(s) 162
Bme1390I CCNGG 5 cut(s) 43, 135, 171, 479, 551
Bme18I GGWCC 1 cut(s) 202
BmeT110I CYCGRG 1 cut(s) 333
BmgT120I GGNCC 6 cut(s) 167, 202, 475, 476, 504, 553
BmiI GGNNCC 5 cut(s) 9, 204, 477, 633, 817
BmrFI CCNGG 5 cut(s) 43, 135, 171, 479, 551
BmrI ACTGGG 1 cut(s) 603
BmsI GCATC 3 cut(s) 106, 335, 513
BmuI ACTGGG 1 cut(s) 603
BoxI GACNNNNGTC 1 cut(s) 200
BpiI GAAGAC 1 cut(s) 776
BpmI CTGGAG 1 cut(s) 192
Bpu10I CCTNAGC 1 cut(s) 144
BpuMI CCSGG 1 cut(s) 479
Bsa29I ATCGAT 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 320
BsaBI GATNNNNATC 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 2 cut(s) 42, 549
Bsc4I CCNNNNNNNGG 3 cut(s) 26, 211, 578
Bse1I ACTGG 1 cut(s) 609
Bse8I GATNNNNATC 1 cut(s) 66
BseBI CCWGG 4 cut(s) 43, 135, 171, 551
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 2 cut(s) 42, 549
BseGI GGATG 3 cut(s) 106, 187, 266
BseJI GATNNNNATC 1 cut(s) 66
BseLI CCNNNNNNNGG 3 cut(s) 26, 211, 578
BseMII CTCAG 3 cut(s) 135, 522, 699
BseNI ACTGG 1 cut(s) 609
BseRI GAGGAG 3 cut(s) 62, 285, 594
BseSI GKGCMC 1 cut(s) 479
BseYI CCCAGC 1 cut(s) 506
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 4 cut(s) 169, 477, 505, 554
BshNI GGYRCC 1 cut(s) 7
BshVI ATCGAT 1 cut(s) 123
BsiEI CGRYCG 1 cut(s) 123
BsiHKCI CYCGRG 1 cut(s) 333
BsiSI CCGG 1 cut(s) 479
BslFI GGGAC 2 cut(s) 188, 472
BslI CCNNNNNNNGG 3 cut(s) 26, 211, 578
BsmAI GTCTC 2 cut(s) 369, 606
BsmFI GGGAC 2 cut(s) 188, 472
BsnI GGCC 4 cut(s) 169, 477, 505, 554
BsoBI CYCGRG 1 cut(s) 333
Bsp120I GGGCCC 1 cut(s) 475
Bsp1286I GDGCHC 1 cut(s) 479
Bsp143I GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
BspACI CCGC 2 cut(s) 160, 179
BspANI GGCC 4 cut(s) 169, 477, 505, 554
BspCNI CTCAG 3 cut(s) 136, 523, 700
BspDI ATCGAT 1 cut(s) 123
BspLI GGNNCC 5 cut(s) 9, 204, 477, 633, 817
BspMI ACCTGC 1 cut(s) 501
BspPI GGATC 3 cut(s) 33, 315, 860
BspT107I GGYRCC 1 cut(s) 7
BsrI ACTGG 1 cut(s) 609
BssECI CCNNGG 2 cut(s) 42, 549
BssMI GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
BssNI GRCGYC 1 cut(s) 8
BssSI CACGAG 1 cut(s) 692
Bst2BI CACGAG 1 cut(s) 692
Bst2UI CCWGG 4 cut(s) 43, 135, 171, 551
BstACI GRCGYC 1 cut(s) 8
BstBAI YACGTR 1 cut(s) 320
BstC8I GCNNGC 3 cut(s) 57, 140, 849
BstDEI CTNAG 3 cut(s) 144, 531, 708
BstF5I GGATG 3 cut(s) 106, 187, 266
BstH2I RGCGCY 1 cut(s) 11
BstHHI GCGC 1 cut(s) 10
BstKTI GATC 8 cut(s) 36, 41, 123, 310, 376, 598, 775, 868
BstMAI GTCTC 2 cut(s) 369, 606
BstMBI GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 1 cut(s) 166
BstNI CCWGG 4 cut(s) 43, 135, 171, 551
BstPAI GACNNNNGTC 1 cut(s) 200
BstSCI CCNGG 5 cut(s) 41, 133, 169, 477, 549
BstSLI GKGCMC 1 cut(s) 479
BstV2I GAAGAC 1 cut(s) 776
BstX2I RGATCY 2 cut(s) 38, 865
BstYI RGATCY 2 cut(s) 38, 865
Bsu15I ATCGAT 1 cut(s) 123
BsuI GTATCC 3 cut(s) 743, 743, 892
BsuRI GGCC 4 cut(s) 169, 477, 505, 554
BsuTUI ATCGAT 1 cut(s) 123
BtsCI GGATG 3 cut(s) 106, 187, 266
BtsIMutI CAGTG 1 cut(s) 77
BveI ACCTGC 1 cut(s) 501
Cac8I GCNNGC 3 cut(s) 57, 140, 849
CaiI CAGNNNCTG 1 cut(s) 869
CfoI GCGC 1 cut(s) 10
Cfr13I GGNCC 6 cut(s) 167, 202, 475, 476, 504, 553
ClaI ATCGAT 1 cut(s) 123
Csp6I GTAC 1 cut(s) 546
CviAII CATG 2 cut(s) 326, 368
CviQI GTAC 1 cut(s) 546
DdeI CTNAG 3 cut(s) 144, 531, 708
DinI GGCGCC 1 cut(s) 9
DpnI GATC 8 cut(s) 35, 40, 122, 309, 375, 597, 774, 867
DpnII GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
DrdI GACNNNNNNGTC 1 cut(s) 598
DseDI GACNNNNNNGTC 1 cut(s) 598
EciI GGCGGA 1 cut(s) 194
Eco24I GRGCYC 1 cut(s) 479
Eco47I GGWCC 1 cut(s) 202
Eco72I CACGTG 1 cut(s) 320
Eco88I CYCGRG 1 cut(s) 333
EcoO109I RGGNCCY 2 cut(s) 167, 202
EcoRII CCWGG 4 cut(s) 41, 133, 169, 549
EcoT38I GRGCYC 1 cut(s) 479
EgeI GGCGCC 1 cut(s) 9
EheI GGCGCC 1 cut(s) 9
FaeI CATG 2 cut(s) 329, 371
FaiI YATR 8 cut(s) 98, 227, 327, 352, 354, 369, 653, 843
FaqI GGGAC 2 cut(s) 188, 472
FatI CATG 2 cut(s) 325, 367
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 1 cut(s) 161
FokI GGATG 3 cut(s) 113, 194, 253
FriOI GRGCYC 1 cut(s) 479
Fsp4HI GCNGC 1 cut(s) 161
FspBI CTAG 1 cut(s) 501
GlaI GCGC 1 cut(s) 9
GluI GCNGC 1 cut(s) 161
GsaI CCCAGC 1 cut(s) 510
GsuI CTGGAG 1 cut(s) 192
HaeII RGCGCY 1 cut(s) 11
HaeIII GGCC 4 cut(s) 169, 477, 505, 554
HapII CCGG 1 cut(s) 479
HhaI GCGC 1 cut(s) 10
Hin1I GRCGYC 1 cut(s) 8
Hin1II CATG 2 cut(s) 329, 371
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HincII GTYRAC 1 cut(s) 393
HindII GTYRAC 1 cut(s) 393
HinfI GANTC 4 cut(s) 13, 62, 329, 449
HpaII CCGG 1 cut(s) 479
Hpy166II GTNNAC 3 cut(s) 393, 591, 617
Hpy188I TCNGA 8 cut(s) 33, 38, 223, 252, 448, 585, 709, 749
Hpy188III TCNNGA 3 cut(s) 635, 694, 788
Hpy8I GTNNAC 3 cut(s) 393, 591, 617
Hpy99I CGWCG 1 cut(s) 749
HpyAV CCTTC 2 cut(s) 622, 805
HpyCH4IV ACGT 2 cut(s) 319, 565
HpyCH4V TGCA 3 cut(s) 325, 526, 878
HpyF10VI GCNNNNNNNGC 1 cut(s) 166
HpyF3I CTNAG 3 cut(s) 144, 531, 708
HpySE526I ACGT 2 cut(s) 319, 565
Hsp92I GRCGYC 1 cut(s) 8
Hsp92II CATG 2 cut(s) 329, 371
HspAI GCGC 1 cut(s) 8
KasI GGCGCC 1 cut(s) 7
Ksp22I TGATCA 1 cut(s) 33
Kzo9I GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
LmnI GCTCC 1 cut(s) 877
LweI GCATC 3 cut(s) 106, 335, 513
MaeI CTAG 1 cut(s) 501
MaeII ACGT 2 cut(s) 319, 565
MalI GATC 8 cut(s) 35, 40, 122, 309, 375, 597, 774, 867
MboI GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
MboII GAAGA 3 cut(s) 8, 237, 776
MflI RGATCY 2 cut(s) 38, 865
MhlI GDGCHC 1 cut(s) 479
MluCI AATT 3 cut(s) 241, 300, 440
Mly113I GGCGCC 1 cut(s) 8
MmeI TCCRAC 3 cut(s) 337, 660, 727
MroXI GAANNNNTTC 1 cut(s) 442
MseI TTAA 3 cut(s) 240, 405, 423
MspI CCGG 1 cut(s) 479
MspR9I CCNGG 5 cut(s) 43, 135, 171, 479, 551
MvaI CCWGG 4 cut(s) 43, 135, 171, 551
MwoI GCNNNNNNNGC 1 cut(s) 166
NarI GGCGCC 1 cut(s) 8
NciI CCSGG 1 cut(s) 479
NdeII GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
NlaIII CATG 2 cut(s) 329, 371
NlaIV GGNNCC 5 cut(s) 9, 204, 477, 633, 817
PaqCI CACCTGC 1 cut(s) 501
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 316
PdmI GAANNNNTTC 1 cut(s) 442
PfeI GAWTC 4 cut(s) 13, 62, 329, 449
PkrI GCNGC 1 cut(s) 162
Ple19I CGATCG 1 cut(s) 123
PluTI GGCGCC 1 cut(s) 11
PmaCI CACGTG 1 cut(s) 320
PmlI CACGTG 1 cut(s) 320
Ppu21I YACGTR 1 cut(s) 320
PpuMI RGGWCCY 1 cut(s) 202
PshAI GACNNNNGTC 1 cut(s) 200
Psp5II RGGWCCY 1 cut(s) 202
Psp6I CCWGG 4 cut(s) 41, 133, 169, 549
PspCI CACGTG 1 cut(s) 320
PspFI CCCAGC 1 cut(s) 506
PspGI CCWGG 4 cut(s) 41, 133, 169, 549
PspN4I GGNNCC 5 cut(s) 9, 204, 477, 633, 817
PspOMI GGGCCC 1 cut(s) 475
PspPI GGNCC 6 cut(s) 167, 202, 475, 476, 504, 553
PspPPI RGGWCCY 1 cut(s) 202
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 2 cut(s) 38, 865
PvuI CGATCG 1 cut(s) 123
RsaI GTAC 1 cut(s) 547
RsaNI GTAC 1 cut(s) 546
SaqAI TTAA 3 cut(s) 240, 405, 423
SatI GCNGC 1 cut(s) 161
Sau3AI GATC 8 cut(s) 33, 38, 120, 307, 373, 595, 772, 865
Sau96I GGNCC 6 cut(s) 167, 202, 475, 476, 504, 553
ScrFI CCNGG 5 cut(s) 43, 135, 171, 479, 551
SduI GDGCHC 1 cut(s) 479
SfaNI GCATC 3 cut(s) 106, 335, 513
SfoI GGCGCC 1 cut(s) 9
SinI GGWCC 1 cut(s) 202
Sse9I AATT 3 cut(s) 241, 300, 440
SsiI CCGC 2 cut(s) 160, 179
SspDI GGCGCC 1 cut(s) 7
SspI AATATT 1 cut(s) 218
SspMI CTAG 1 cut(s) 501
StyD4I CCNGG 5 cut(s) 41, 133, 169, 477, 549
TaiI ACGT 2 cut(s) 322, 568
TaqI TCGA 1 cut(s) 123
TasI AATT 3 cut(s) 241, 300, 440
TauI GCSGC 1 cut(s) 163
TfiI GAWTC 4 cut(s) 13, 62, 329, 449
Tru1I TTAA 3 cut(s) 240, 405, 423
Tru9I TTAA 3 cut(s) 240, 405, 423
TscAI CASTG 1 cut(s) 77
TspDTI ATGAA 3 cut(s) 17, 102, 141
TspGWI ACGGA 2 cut(s) 212, 654
TspRI CASTG 1 cut(s) 77
VpaK11BI GGWCC 1 cut(s) 202
XapI RAATTY 1 cut(s) 440
XmnI GAANNNNTTC 1 cut(s) 442
XspI CTAG 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.