pycom16g14820

Regulator of Ty1 transposition protein 107 BRCT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0007475
Physical Location & Seq
Forward (+)
10858383 .. 10864060
5678 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3687 bp
ATGGGTTCCCTCTGGGACGGCGACGATGAAATCAAGCCGATGGAGAAAAACTCACTCGTCGACTACGCCGATACCGAGCCCATTTATACTCAGATTTCAAGCCCTCCATTGTCCGATGAGAAGGGCAAATCGAAGGATGCGGATGAGTTAGTGCGAGACATTGTGCCATGTGATGGTACTGTTCCAGTTGAAGATGCATTTGAAACCCAAATGGTAGATTTTAGTGATGAAACCCAATTAATGGATTTCGCAACTGAAACCCAAGTAATGGATTTCGGTGGTGAAACACAAGCGATGGATTTCGGTGGCGAAACACAAGCGATGGATTTCGGTGGTGAGACACAAGCAGTGGATTTCAGTGGTGAAACACAACTATTGGATGATATCAATTGCTTTGCAAACATGGAGGATACTCAGTTATTAGAGTTTGATGATGTAGTTGTCAGTGACAGTGAAGAGTCGGATGCAACTGAAGTTTTGGATGATAGTAAGGATCTAACTGACAATGAATCGGTACGGAGAGGTTCTGATCAATTAATGAATGGGGAGAATATTTGCCGCACTCCTTGCGAAAATAGTGAAAATGGGTTAACAGAGCAAGCCAATCATTTGGTCGACAAGCAACACAATGCAGGGCTCCATGTTTCTGCTGCAACACCTGTGGATGACGGCTCCCCGGAACTGGGACCAGGTTCTGTGCATATGCAATTTACCTCAGTCCGTGCAGCATCCTTACAGGCCTCTGGTCTAGCAGCTTGCAGTACAGCTTTGAATGGTACCAACAGTGAGTCTCGTTCTGTTCCAAGTAATAACCAATCTTTGAATCAACTTTCCGGGAAAGATAATGCAGTATCTCTTTTAGGGGGTTCGACCATAGATGGGGAAGAAGTCAATGAGGAGCATGATTCAAGGAATGAGAACAAATGGAGGACTGGTAGTTCAACAGCAAGAAAACTTTTTACTGAGGATTCAGATGCTGAAAACACGGAAATTTCTCATAACAGCGCTAGTGATGAAGAAGCTGAAGATTTGCTTCAGTTTCCTAGCAATTTTGCAGGGTTGAGCTATATTGACTCTCAAGAACCAGGTGAATTATCACAGGCTAATGCACTTGATTTTGTGGATAAATTCCTCCAAAATAATCTGGATGAGTCTAATAAAGAAGTTGGCCGTGGAAAGAGTGCAAGGGACATTTCAAAATTTGTCTCAAGTGCAAAAGGGCCACAAACTTTGGCCAAGAAAGCCAATGACAAAAGCATAGATAAAGGGATTTTCGATTGGGATGATAACCGTGAGGATGAAGAAGGAGGTGAATTTTTCCGCCGAAGAAAAGCAGACTTCTTCGACGGAGGTGAACTTTTCCACCGAAGAAAAGCAGACTTCTTCGACGGCGGAAGCCATGGGTGGAGATCTCTTCCCCAACCCCAGAAGTCCAAAGAGAAAAGACAGGATGTGGAGAAGGATTGCAAAAAACAATTACAAGGAAAAAACAAGAGAATAGGTGTAGTTCATTCTGATTCAAAACTATTGTTGCATAATTCAAAAGTCGACAAGAAGACAGCACATGAAGATGAAATGAAACATATAAAGAATCTCGTCAGTGAGTTTGACGAACAGTTTAACAATGACTCCCCTAGAGAGCAGTTGGATGCCAATATAAATAAGAACGATGCACCTGAAATGATGAATGTAGGCTTTGATACTCAAATGGCAGCTGAAGCTATGGAAGCCTTGTGTTATGGTGAAGGGATTTCCAATTGTGATGCTAGTGATGACCATCAAGATGCTCAAGGAAATCAGAGTTGTCCTGAAGGTTCGATGGGAGAAAAATCAAAGAATAGAACTTGTTCAACGAAACTGTCTTCTCGAAAAAGAGGGCGTTTAACTGATGCAGGGGTTTCCCGAGAAACTCGACAAGCAAAGAAATCGAGGGTTGGTAGGAAGGAGTGTGAAACAAAGGTGGTGATAGCAAAATCAAAGAAGGGGAAGTCCAATGCTAAAAAGCATCTTAACATCATTGGGAACAGAAACATGGAGAAAATGCCTTCTGTTGCTATTGGCCTAAGAGCAGAAGGATCTATAAAAAAGCATTTACAACAGGATGTTGGTACGTTTACGCTGATCGCACGTCGAACTAGACGGTCTATGGTGGTAAATCAGTTAAAGAAAGCTGACGATGCATCCAGTGATTGTGGAGAAGAGTCGAGCTCTCAAACAGAGGATGTTGCAACTAGAGAAAAAATAATTAGTTTCACAGGTGTTCAGGTGTCTAATGTGTTGAATGCAAAATCTTCAAAATCAGGTCCCAATCGATCCGGAGAAGTTGGAAATCATAAACCAAGCCAACATCATGGTTCAGATCTCAAGTTTGAAGCTATTTGCAATGGCATCAAATTGGATGATTTAAGCTTCCCCAAAGGAAAAAGATCTAGGAGAAAGTTATCTGATCAGGTTTATGGGCCTGATAACTTAAATGATCCACCGACCCCATCTGTTCACCCAGACAAAGTTGGACAACATGTCACTAGGCACACAAGATTGCAGGGTGCTGCTCAAAGCATTTATGTTGATGTAAAGTCAACAAGAAGAACCCGATCAGCTACACGTGGTGACAAGAATTGTGCTAGAAAACTTGCACATCAAAGTTTAAAAACTGATCCTTGGAAAGCTCCTCTTCGTTGTAATTCTTCTCATAAGGATGGGATAATGATATCAGAGATTACAACTGGTGGAGAGGCAGTTGGAATTCTTGACAGGATGAGGGATGAATCCCCGCTAGGGAAATGCAAACCACTGGATTCAGCTTGTGCTACTCCAGTTAACAGTAAGGTGCCTGTCAATGATGCATCTCCAGTTTGTATGGGTAATGAATATTTCAAACAGTCATGCAAGAAGACCCCTTCAAGGCCAAGTCTTTTGAAAGAAATCCGTGACTTAAGTGCAAATGGCCATATACCAACTTCAGCATCAAAGGATTTAAGGAAGAGGAGAGATATGACTGATGTTCGAGTATTGTATAGCCACCACTTGGATGACTATGTAATTAAGCATCAGAAAAAGATTTTGGCCCGACTAGGAGTTTCTGTAGCATCCTCTATGACAGATGCCACACACTTCATAGCAGATCAATTTGTGCGTACGAGGAATATGTTAGAAGCTATTGCTGCTGGAAAACCAGTGGTGACGCATTTATGGCTCGATAGCTGTGGACAAGCTAGTTGTTTCATTGATGAGAAAAACTATGTACTAAGGGATACCAAGAAGGAGAAGGAGTTTGGCTTTAACATGCCGACTTCGTTGGTACGTGCATGCCAGCATCCACTTCTGGAGGGTCGTAAAGTCTTCATCACCCCAAATACGAAGCCTGGTAAAGAAATAATTTCTAGTCTGGTAAAAGCAGTCCATGGCCAGGCAATAGAAAGAATTGGTAGATCTGTTTTGGAGGCTGATAAAATTCCAGATGATCTGTTGGTTCTATCTTGTGAAGAAGATTATGAAATTTGTGTGCCTTTACTCGAAAAAGGAGCTACAGTTTACAGCTCAGAGTTGCTTTTGAATGGGATTGTTACTCAGAAGCTGGAGTTTGAAAGGCATCGCCTCTTCACAGATCAAGTTAAGAAAACCCGTTCGACCATATGGCTAAGGAAAGATGGCAGTAAGTTCCTCCCTGTGACAAAAAATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000414 GO:0000416 GO:0000726 GO:0002637 GO:0002639 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002700 GO:0002702 GO:0002703 GO:0002705 GO:0002706 GO:0002708 GO:0002712 GO:0002714 GO:0002819 GO:0002821 GO:0002822 GO:0002824 GO:0002889 GO:0002891 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006479 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008213 GO:0009314 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010212 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010638 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030330 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032259 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034708 GO:0034968 GO:0035065 GO:0035066 GO:0035097 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043412 GO:0043414 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044666 GO:0045191 GO:0045830 GO:0045893 GO:0045911 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050864 GO:0050865 GO:0050867 GO:0050871 GO:0050896 GO:0051052 GO:0051054 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051254 GO:0051276 GO:0051568 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0060260 GO:0060261 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0072331 GO:0080090 GO:0090304 GO:1901360 GO:1901564 GO:1901983 GO:1901985 GO:1902275 GO:1902494 GO:1902680 GO:1903320 GO:1903322 GO:1903506 GO:1903508 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000142 GO:2000144 GO:2000756 GO:2000758 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

1229

Amino Acids

135.67

Weight (kDa)

5.73

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RTT107_BRCT_5 PF16770 990 - 1083 1.1e-09 Regulator of Ty1 transposition protein 107 BRCT domain
BRCT_2 PF16589 1107 - 1194 1.2e-17 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 776
AccB1I GGYRCC 2 cut(s) 776, 2830
AccB7I CCANNNNNTGG 4 cut(s) 173, 241, 268, 3028
AccI GTMKAC 3 cut(s) 60, 615, 1548
AccIII TCCGGA 1 cut(s) 2315
AciI CCGC 5 cut(s) 140, 559, 1321, 1392, 2774
AclWI GGATC 5 cut(s) 501, 2083, 2307, 2471, 2651
AcoI YGGCCR 4 cut(s) 1168, 1233, 2947, 3406
AcsI RAATTY 7 cut(s) 990, 1127, 1199, 1313, 2745, 3453, 3498
AcuI CTGAAG 6 cut(s) 492, 1019, 1044, 1737, 1830, 2946
AcvI CACGTG 1 cut(s) 2606
AdeI CACNNNGTG 1 cut(s) 2609
AfaI GTAC 8 cut(s) 178, 516, 763, 778, 2110, 3139, 3246, 3303
AfeI AGCGCT 1 cut(s) 1006
AflII CTTAAG 1 cut(s) 2935
AflIII ACRYGT 2 cut(s) 2518, 2603
AhdI GACNNNNNGTC 1 cut(s) 2519
AjiI CACGTC 1 cut(s) 2129
AjnI CCWGG 4 cut(s) 688, 1084, 3364, 3408
AjuI GAANNNNNNNTTGG 2 cut(s) 3047, 3079
AloI GAACNNNNNNTCC 2 cut(s) 922, 954
Alw21I GWGCWC 1 cut(s) 2210
Alw26I GTCTC 4 cut(s) 150, 332, 795, 1210
AlwI GGATC 5 cut(s) 501, 2083, 2307, 2471, 2651
AlwNI CAGNNNCTG 3 cut(s) 695, 977, 3577
Ama87I CYCGRG 1 cut(s) 1902
Aor13HI TCCGGA 1 cut(s) 2315
Aor51HI AGCGCT 1 cut(s) 1006
ApeKI GCWGC 6 cut(s) 650, 725, 752, 1712, 2549, 3164
ApoI RAATTY 7 cut(s) 990, 1127, 1199, 1313, 2745, 3453, 3498
AseI ATTAAT 2 cut(s) 239, 536
Asp700I GAANNNNTTC 1 cut(s) 1846
Asp718I GGTACC 1 cut(s) 776
AspLEI GCGC 1 cut(s) 1007
AspS9I GGNCC 5 cut(s) 686, 1220, 2303, 2459, 3067
AsuC2I CCSGG 2 cut(s) 677, 835
AvaI CYCGRG 1 cut(s) 1902
AvaII GGWCC 2 cut(s) 686, 2303
BalI TGGCCA 3 cut(s) 1235, 2949, 3408
BanI GGYRCC 2 cut(s) 776, 2830
BanII GRGCYC 3 cut(s) 81, 639, 2210
BbrPI CACGTG 1 cut(s) 2606
BbsI GAAGAC 4 cut(s) 1562, 1854, 2900, 3334
Bbv12I GWGCWC 1 cut(s) 2210
BbvI GCAGC 6 cut(s) 637, 737, 764, 1724, 2536, 3151
BceAI ACGGC 4 cut(s) 34, 685, 1155, 1405
BcgI CGANNNNNNTGC 2 cut(s) 1908, 1942
BciT130I CCWGG 4 cut(s) 690, 1086, 3366, 3410
BciVI GTATCC 2 cut(s) 403, 3247
BclI TGATCA 2 cut(s) 529, 2446
BcnI CCSGG 2 cut(s) 677, 835
BcoDI GTCTC 4 cut(s) 150, 332, 795, 1210
BfmI CTRYAG 2 cut(s) 3084, 3528
BfoI RGCGCY 1 cut(s) 1008
BfrI CTTAAG 1 cut(s) 2935
BfuI GTATCC 2 cut(s) 403, 3247
BglII AGATCT 4 cut(s) 1409, 2359, 2426, 3431
BisI GCNGC 7 cut(s) 559, 651, 726, 753, 1713, 2550, 3165
BlsI GCNGC 7 cut(s) 560, 652, 727, 754, 1714, 2551, 3166
Bme1390I CCNGG 6 cut(s) 677, 690, 835, 1086, 3366, 3410
Bme18I GGWCC 2 cut(s) 686, 2303
BmeRI GACNNNNNGTC 1 cut(s) 2519
BmeT110I CYCGRG 1 cut(s) 1902
BmgBI CACGTC 1 cut(s) 2129
BmgT120I GGNCC 5 cut(s) 686, 1220, 2303, 2459, 3067
BmiI GGNNCC 7 cut(s) 7, 638, 673, 687, 778, 2305, 2832
BmrFI CCNGG 6 cut(s) 677, 690, 835, 1086, 3366, 3410
BmrI ACTGGG 1 cut(s) 692
BmuI ACTGGG 1 cut(s) 692
BpiI GAAGAC 4 cut(s) 1562, 1854, 2900, 3334
BplI GAGNNNNNCTC 4 cut(s) 35, 67, 2192, 2224
BpmI CTGGAG 4 cut(s) 2799, 2835, 3347, 3599
Bpu10I CCTNAGC 1 cut(s) 3641
BpuEI CTTGAG 4 cut(s) 1062, 1192, 1773, 2348
BpuMI CCSGG 2 cut(s) 677, 835
Bsa29I ATCGAT 1 cut(s) 2311
BsaAI YACGTR 2 cut(s) 2606, 3305
BsaBI GATNNNNATC 1 cut(s) 1776
BsaJI CCNNGG 5 cut(s) 675, 1171, 1399, 2660, 3403
BsaWI WCCGGW 1 cut(s) 2315
Bse1I ACTGG 9 cut(s) 185, 687, 937, 2184, 2731, 2799, 2816, 2852, 3176
Bse3DI GCAATG 1 cut(s) 2389
Bse8I GATNNNNATC 1 cut(s) 1776
BseAI TCCGGA 1 cut(s) 2315
BseBI CCWGG 4 cut(s) 690, 1086, 3366, 3410
BseCI ATCGAT 1 cut(s) 2311
BseDI CCNNGG 5 cut(s) 675, 1171, 1399, 2660, 3403
BseJI GATNNNNATC 1 cut(s) 1776
BseMI GCAATG 1 cut(s) 2389
BseMII CTCAG 6 cut(s) 104, 428, 729, 954, 3555, 3584
BseNI ACTGG 9 cut(s) 185, 687, 937, 2184, 2731, 2799, 2816, 2852, 3176
BseRI GAGGAG 3 cut(s) 911, 2661, 3001
BseXI GCAGC 6 cut(s) 637, 737, 764, 1724, 2536, 3151
BsgI GTGCAG 1 cut(s) 744
BshNI GGYRCC 2 cut(s) 776, 2830
BshVI ATCGAT 1 cut(s) 2311
BsiHKAI GWGCWC 1 cut(s) 2210
BsiHKCI CYCGRG 1 cut(s) 1902
BsiSI CCGG 3 cut(s) 677, 834, 2316
BsiWI CGTACG 1 cut(s) 3137
BslFI GGGAC 4 cut(s) 29, 699, 1202, 2289
BsmAI GTCTC 4 cut(s) 150, 332, 795, 1210
BsmFI GGGAC 4 cut(s) 29, 699, 1202, 2289
BsmI GAATGC 1 cut(s) 2287
BsoBI CYCGRG 1 cut(s) 1902
Bsp1286I GDGCHC 3 cut(s) 81, 639, 2210
Bsp13I TCCGGA 1 cut(s) 2315
Bsp19I CCATGG 2 cut(s) 1399, 3403
BspACI CCGC 5 cut(s) 140, 559, 1321, 1392, 2774
BspCNI CTCAG 6 cut(s) 103, 427, 728, 955, 3554, 3583
BspDI ATCGAT 1 cut(s) 2311
BspEI TCCGGA 1 cut(s) 2315
BspLI GGNNCC 7 cut(s) 7, 638, 673, 687, 778, 2305, 2832
BspPI GGATC 5 cut(s) 501, 2083, 2307, 2471, 2651
BspT107I GGYRCC 2 cut(s) 776, 2830
BspTI CTTAAG 1 cut(s) 2935
BsrDI GCAATG 1 cut(s) 2389
BsrI ACTGG 9 cut(s) 185, 687, 937, 2184, 2731, 2799, 2816, 2852, 3176
BssECI CCNNGG 5 cut(s) 675, 1171, 1399, 2660, 3403
BssT1I CCWWGG 3 cut(s) 1399, 2660, 3403
Bst2UI CCWGG 4 cut(s) 690, 1086, 3366, 3410
Bst6I CTCTTC 6 cut(s) 450, 1419, 2193, 2679, 2978, 3605
BstAFI CTTAAG 1 cut(s) 2935
BstAPI GCANNNNNTGC 1 cut(s) 567
BstBAI YACGTR 2 cut(s) 2606, 3305
BstC8I GCNNGC 4 cut(s) 600, 757, 3310, 3314
BstDEI CTNAG 9 cut(s) 90, 414, 715, 963, 2063, 3248, 3541, 3570, 3641
BstDSI CCRYGG 3 cut(s) 1171, 1399, 3403
BstH2I RGCGCY 1 cut(s) 1008
BstHHI GCGC 1 cut(s) 1007
BstMAI GTCTC 4 cut(s) 150, 332, 795, 1210
BstMWI GCNNNNNNNGC 7 cut(s) 567, 1241, 1718, 1727, 2177, 3164, 3193
BstNI CCWGG 4 cut(s) 690, 1086, 3366, 3410
BstNSI RCATGY 3 cut(s) 2522, 3289, 3312
BstSCI CCNGG 6 cut(s) 675, 688, 833, 1084, 3364, 3408
BstSFI CTRYAG 2 cut(s) 3084, 3528
BstV1I GCAGC 6 cut(s) 637, 737, 764, 1724, 2536, 3151
BstV2I GAAGAC 4 cut(s) 1562, 1854, 2900, 3334
BstX2I RGATCY 6 cut(s) 493, 1409, 2075, 2359, 2426, 3431
BstXI CCANNNNNNTGG 2 cut(s) 610, 2351
BstYI RGATCY 6 cut(s) 493, 1409, 2075, 2359, 2426, 3431
Bsu15I ATCGAT 1 cut(s) 2311
BsuI GTATCC 2 cut(s) 403, 3247
BsuTUI ATCGAT 1 cut(s) 2311
BtgI CCRYGG 3 cut(s) 1171, 1399, 3403
BtgZI GCGATG 3 cut(s) 308, 335, 3578
BtrI CACGTC 1 cut(s) 2129
BtsI GCAGTG 1 cut(s) 354
BtsIMutI CAGTG 9 cut(s) 354, 364, 451, 457, 790, 1606, 2191, 2792, 3183
Cac8I GCNNGC 4 cut(s) 600, 757, 3310, 3314
CaiI CAGNNNCTG 3 cut(s) 695, 977, 3577
CfoI GCGC 1 cut(s) 1007
Cfr13I GGNCC 5 cut(s) 686, 1220, 2303, 2459, 3067
ClaI ATCGAT 1 cut(s) 2311
CseI GACGC 1 cut(s) 3193
CsiI ACCWGGT 2 cut(s) 688, 1084
Csp6I GTAC 8 cut(s) 177, 515, 762, 777, 2109, 3138, 3245, 3302
CspCI CAANNNNNGTGG 4 cut(s) 642, 677, 1212, 1247
CviQI GTAC 8 cut(s) 177, 515, 762, 777, 2109, 3138, 3245, 3302
DdeI CTNAG 9 cut(s) 90, 414, 715, 963, 2063, 3248, 3541, 3570, 3641
DraI TTTAAA 1 cut(s) 2649
DraIII CACNNNGTG 1 cut(s) 2609
DriI GACNNNNNGTC 1 cut(s) 2519
EaeI YGGCCR 4 cut(s) 1168, 1233, 2947, 3406
Eam1104I CTCTTC 6 cut(s) 450, 1419, 2193, 2679, 2978, 3605
Eam1105I GACNNNNNGTC 1 cut(s) 2519
EarI CTCTTC 6 cut(s) 450, 1419, 2193, 2679, 2978, 3605
EciI GGCGGA 2 cut(s) 1310, 1407
Ecl136II GAGCTC 1 cut(s) 2208
Eco130I CCWWGG 3 cut(s) 1399, 2660, 3403
Eco147I AGGCCT 1 cut(s) 740
Eco24I GRGCYC 3 cut(s) 81, 639, 2210
Eco32I GATATC 2 cut(s) 385, 2712
Eco47I GGWCC 2 cut(s) 686, 2303
Eco47III AGCGCT 1 cut(s) 1006
Eco53kI GAGCTC 1 cut(s) 2208
Eco57I CTGAAG 6 cut(s) 492, 1019, 1044, 1737, 1830, 2946
Eco72I CACGTG 1 cut(s) 2606
Eco88I CYCGRG 1 cut(s) 1902
EcoICRI GAGCTC 1 cut(s) 2208
EcoO109I RGGNCCY 1 cut(s) 2303
EcoRI GAATTC 1 cut(s) 2745
EcoRII CCWGG 4 cut(s) 688, 1084, 3364, 3408
EcoRV GATATC 2 cut(s) 385, 2712
EcoT14I CCWWGG 3 cut(s) 1399, 2660, 3403
EcoT22I ATGCAT 3 cut(s) 199, 2182, 2848
EcoT38I GRGCYC 3 cut(s) 81, 639, 2210
ErhI CCWWGG 3 cut(s) 1399, 2660, 3403
FalI AAGNNNNNCTT 4 cut(s) 1017, 1049, 2658, 2690
FaqI GGGAC 4 cut(s) 29, 699, 1202, 2289
FauI CCCGC 1 cut(s) 2781
FauNDI CATATG 2 cut(s) 702, 3635
FbaI TGATCA 2 cut(s) 529, 2446
FblI GTMKAC 3 cut(s) 60, 615, 1548
Fnu4HI GCNGC 7 cut(s) 559, 651, 726, 753, 1713, 2550, 3165
FriOI GRGCYC 3 cut(s) 81, 639, 2210
Fsp4HI GCNGC 7 cut(s) 559, 651, 726, 753, 1713, 2550, 3165
GlaI GCGC 1 cut(s) 1006
GluI GCNGC 7 cut(s) 559, 651, 726, 753, 1713, 2550, 3165
GsuI CTGGAG 4 cut(s) 2799, 2835, 3347, 3599
HaeII RGCGCY 1 cut(s) 1008
HapII CCGG 3 cut(s) 677, 834, 2316
HgaI GACGC 1 cut(s) 3193
HhaI GCGC 1 cut(s) 1007
Hin6I GCGC 1 cut(s) 1005
HinP1I GCGC 1 cut(s) 1005
HincII GTYRAC 6 cut(s) 61, 591, 616, 1549, 2580, 2821
HindII GTYRAC 6 cut(s) 61, 591, 616, 1549, 2580, 2821
HindIII AAGCTT 1 cut(s) 2407
HpaI GTTAAC 2 cut(s) 591, 2821
HpaII CCGG 3 cut(s) 677, 834, 2316
Hpy99I CGWCG 5 cut(s) 26, 62, 1349, 1391, 2133
HpyCH4IV ACGT 4 cut(s) 2111, 2128, 2605, 3304
HpyF10VI GCNNNNNNNGC 7 cut(s) 567, 1241, 1718, 1727, 2177, 3164, 3193
HpyF3I CTNAG 9 cut(s) 90, 414, 715, 963, 2063, 3248, 3541, 3570, 3641
HpySE526I ACGT 4 cut(s) 2111, 2128, 2605, 3304
HspAI GCGC 1 cut(s) 1005
Kpn2I TCCGGA 1 cut(s) 2315
KpnI GGTACC 1 cut(s) 780
Ksp22I TGATCA 2 cut(s) 529, 2446
KspAI GTTAAC 2 cut(s) 591, 2821
LmnI GCTCC 5 cut(s) 642, 677, 898, 2674, 3524
Lsp1109I GCAGC 6 cut(s) 637, 737, 764, 1724, 2536, 3151
MabI ACCWGGT 2 cut(s) 688, 1084
MaeII ACGT 4 cut(s) 2111, 2128, 2605, 3304
MaeIII GTNAC 7 cut(s) 446, 2521, 2609, 2930, 3181, 3565, 3670
MfeI CAATTG 2 cut(s) 388, 1756
MflI RGATCY 6 cut(s) 493, 1409, 2075, 2359, 2426, 3431
MhlI GDGCHC 3 cut(s) 81, 639, 2210
MlsI TGGCCA 3 cut(s) 1235, 2949, 3408
MluNI TGGCCA 3 cut(s) 1235, 2949, 3408
MlyI GAGTC 6 cut(s) 467, 797, 1067, 1160, 1622, 2210
MmeI TCCRAC 5 cut(s) 441, 1626, 2305, 2491, 2722
Mox20I TGGCCA 3 cut(s) 1235, 2949, 3408
Mph1103I ATGCAT 3 cut(s) 199, 2182, 2848
MroI TCCGGA 1 cut(s) 2315
MroXI GAANNNNTTC 1 cut(s) 1846
MscI TGGCCA 3 cut(s) 1235, 2949, 3408
MslI CAYNNNNRTG 4 cut(s) 1569, 1782, 2697, 3030
Msp20I TGGCCA 3 cut(s) 1235, 2949, 3408
MspA1I CMGCKG 1 cut(s) 1715
MspCI CTTAAG 1 cut(s) 2935
MspI CCGG 3 cut(s) 677, 834, 2316
MspR9I CCNGG 6 cut(s) 677, 690, 835, 1086, 3366, 3410
MunI CAATTG 2 cut(s) 388, 1756
Mva1269I GAATGC 1 cut(s) 2287
MvaI CCWGG 4 cut(s) 690, 1086, 3366, 3410
MwoI GCNNNNNNNGC 7 cut(s) 567, 1241, 1718, 1727, 2177, 3164, 3193
NciI CCSGG 2 cut(s) 677, 835
NcoI CCATGG 2 cut(s) 1399, 3403
NdeI CATATG 2 cut(s) 702, 3635
NlaIV GGNNCC 7 cut(s) 7, 638, 673, 687, 778, 2305, 2832
NmuCI GTSAC 6 cut(s) 446, 2521, 2609, 2930, 3181, 3670
NsiI ATGCAT 3 cut(s) 199, 2182, 2848
NspI RCATGY 3 cut(s) 2522, 3289, 3312
PaeI GCATGC 1 cut(s) 3312
PceI AGGCCT 1 cut(s) 740
PciI ACATGT 1 cut(s) 2518
PcsI WCGNNNNNNNCGW 2 cut(s) 66, 72
PctI GAATGC 1 cut(s) 2287
PdmI GAANNNNTTC 1 cut(s) 1846
PfeI GAWTC 8 cut(s) 509, 823, 905, 968, 1517, 1591, 2768, 2798
Pfl23II CGTACG 1 cut(s) 3137
PflMI CCANNNNNTGG 4 cut(s) 173, 241, 268, 3028
PfoI TCCNGGA 1 cut(s) 833
PkrI GCNGC 7 cut(s) 560, 652, 727, 754, 1714, 2551, 3166
PleI GAGTC 6 cut(s) 466, 796, 1067, 1159, 1622, 2209
PmaCI CACGTG 1 cut(s) 2606
PmlI CACGTG 1 cut(s) 2606
PpsI GAGTC 6 cut(s) 466, 796, 1067, 1159, 1622, 2209
Ppu21I YACGTR 2 cut(s) 2606, 3305
PpuMI RGGWCCY 1 cut(s) 2303
PscI ACATGT 1 cut(s) 2518
PshBI ATTAAT 2 cut(s) 239, 536
Psp124BI GAGCTC 1 cut(s) 2210
Psp5II RGGWCCY 1 cut(s) 2303
Psp6I CCWGG 4 cut(s) 688, 1084, 3364, 3408
PspCI CACGTG 1 cut(s) 2606
PspGI CCWGG 4 cut(s) 688, 1084, 3364, 3408
PspLI CGTACG 1 cut(s) 3137
PspN4I GGNNCC 7 cut(s) 7, 638, 673, 687, 778, 2305, 2832
PspPI GGNCC 5 cut(s) 686, 1220, 2303, 2459, 3067
PspPPI RGGWCCY 1 cut(s) 2303
PstNI CAGNNNCTG 3 cut(s) 695, 977, 3577
PsuI RGATCY 6 cut(s) 493, 1409, 2075, 2359, 2426, 3431
PvuII CAGCTG 1 cut(s) 1715
RsaI GTAC 8 cut(s) 178, 516, 763, 778, 2110, 3139, 3246, 3303
RsaNI GTAC 8 cut(s) 177, 515, 762, 777, 2109, 3138, 3245, 3302
RseI CAYNNNNRTG 4 cut(s) 1569, 1782, 2697, 3030
SacI GAGCTC 1 cut(s) 2210
SalI GTCGAC 3 cut(s) 59, 614, 1547
SatI GCNGC 7 cut(s) 559, 651, 726, 753, 1713, 2550, 3165
Sau96I GGNCC 5 cut(s) 686, 1220, 2303, 2459, 3067
SchI GAGTC 6 cut(s) 467, 797, 1067, 1160, 1622, 2210
ScrFI CCNGG 6 cut(s) 677, 690, 835, 1086, 3366, 3410
SduI GDGCHC 3 cut(s) 81, 639, 2210
SexAI ACCWGGT 2 cut(s) 688, 1084
SfcI CTRYAG 2 cut(s) 3084, 3528
SinI GGWCC 2 cut(s) 686, 2303
SmiMI CAYNNNNRTG 4 cut(s) 1569, 1782, 2697, 3030
SmlI CTYRAG 5 cut(s) 1077, 1207, 1788, 2363, 2935
SmoI CTYRAG 5 cut(s) 1077, 1207, 1788, 2363, 2935
SphI GCATGC 1 cut(s) 3312
SseBI AGGCCT 1 cut(s) 740
SsiI CCGC 5 cut(s) 140, 559, 1321, 1392, 2774
SspI AATATT 2 cut(s) 553, 2873
SstI GAGCTC 1 cut(s) 2210
StuI AGGCCT 1 cut(s) 740
StyD4I CCNGG 6 cut(s) 675, 688, 833, 1084, 3364, 3408
StyI CCWWGG 3 cut(s) 1399, 2660, 3403
TaiI ACGT 4 cut(s) 2114, 2131, 2608, 3307
TatI WGTACW 2 cut(s) 761, 3244
TauI GCSGC 1 cut(s) 561
TfiI GAWTC 8 cut(s) 509, 823, 905, 968, 1517, 1591, 2768, 2798
TscAI CASTG 9 cut(s) 354, 364, 451, 457, 790, 1606, 2191, 2799, 3183
TseFI GTSAC 6 cut(s) 446, 2521, 2609, 2930, 3181, 3670
TseI GCWGC 6 cut(s) 650, 725, 752, 1712, 2549, 3164
Tsp45I GTSAC 6 cut(s) 446, 2521, 2609, 2930, 3181, 3670
TspGWI ACGGA 5 cut(s) 532, 710, 1001, 1362, 2918
TspRI CASTG 9 cut(s) 354, 364, 451, 457, 790, 1606, 2191, 2799, 3183
Van91I CCANNNNNTGG 4 cut(s) 173, 241, 268, 3028
Vha464I CTTAAG 1 cut(s) 2935
VpaK11BI GGWCC 2 cut(s) 686, 2303
VspI ATTAAT 2 cut(s) 239, 536
XapI RAATTY 7 cut(s) 990, 1127, 1199, 1313, 2745, 3453, 3498
XceI RCATGY 3 cut(s) 2522, 3289, 3312
XmiI GTMKAC 3 cut(s) 60, 615, 1548
XmnI GAANNNNTTC 1 cut(s) 1846
Zsp2I ATGCAT 3 cut(s) 199, 2182, 2848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.