Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004385

Physical Location & Seq

Genomic Coordinates Reverse (-)

11030760 .. 11034383

Gene Structure 3624 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGTTTTCGGGAACATGGGAAGTACTTCAGGGACAGGTGTTCTGTTCACTAGAAATCCAAGCACGGGTGAAAGGAAGCTTTATGGCGAGTTTCTAGTCAATGCTCAGGGAGAAGATGTAGTTGCCGGGATCAGGACGCCAGAAGATGTGGATGCTATGAAAAATTGCATGCCCGAAGCTTACAAGGAGCTTGTAGAGAACTGTGAAATTCTGGAAAAGCATTACAAAGATATGATGGACATTGAGTTCACAGTCCAAGAAAATAGGTTGTGGATGTTGCAATGCCGTGTTGGAAAGCGTACTGGTAAAGGTGCTGTTAAGATAGCCGTAGACATGGCTAACGAAGGGCTTGTGAATAAGCATGCTGCAATCAAGATGGTGGAACCACAGCACCTTGACCAACTTCTTCATCCACAGTTTGAGAATCCAACCGCTTACAAAGACAAGGTGCTCGCCACTGGGTTACCTGCATCTCCAGGAGCAGCAGTAGGACAAGTCGTGTTCAATGCAGAAGATGCTGAATCATGGCATGCACAAGGAAAGAAAGTTATCCTGGTAAGGACTGAAACTAGCCCCGAAGATGTTGGGGGTATGCATGCCGCTGCTGGAATCTTGACAGCTAGAGGTGGCATGACATCTCATGCAGCTGTTGTAGCCCGTGGGTGGGGTAAATGTTGTGTTTCTGGCTGCGCTGACATCCGAGTAAATGACAGAGAGAAGCTGGTTTTGATCGGGAAAACGGTGGTCAATGAAGGAGAATGGCTTTCACTCAATCGATCGACTGGTGAAGTCATATTGGGAAAACAGCCACTTTCTCCTCCGGCTTTGAGTGGCGATTTGGAAACCTTTATGTCTTGGGCTGATAAAGTCAGGCGTCTCAAGGTGATGGCAAATGCTGACACGCCTGAAGATGCGATAACAGCAAGAAATAACGGTGCACAAGGGATTGGACTTTGCAGGACAGAACACATGTTCTTTGCTTCGGATGATAGAATAAAGGCAGTAAGAAAAATGATCATGGCGGCTACACCTGAACAGAGGAAGGTGGCAATGGACCTCTTACTACCATATCAGAGATCTGACTTTGAAGGAATTTTCCGTGCAATGGATGGTCTTCCGGTAACAATCCGCCTGTTAGACCCTCCACTTCATGAATTTCTTCCAGAAGGTAACTTGGAGCAGATTGTCGGCCAACTAACTGCACAGACTGGCATGACTGAGGACGAAGTTTTCTCCAGAGTTGAAAAATTATCAGAAGTGAACCCCATGCTTGGTTTCCGCGGCTGCAGGCTAGGGATATCCTACCCAGAGCTCACCAAAATGCAGGCACGCGCAATCTTTCAAGCTGCAGTCTCAATGAGCAACCAGGGTGTCAAAGTTTTCCCTGAGATAATGGTTCCCCTTGTCGGAATACCTCAGGAACTGGGACATCAAGTGAAGCTCATTCACAGTGTCGCGGTTAACGTGTTCTCTGAGATGGGTACCACCGTGAGCTATAAGGTTGGAACTATGATCGAGATCCCTAGAGCTGCTCTGGTTGCAGATGAGATTGCAAAGGAAGCTGAGTTCTTCTCCTTCGGGACCAATGATCTCACACAAATGACATTCGGGTACAGTAGAGATGATGTGGGCAAGTTTCTACCTATTTACCTCTCCAAAGGCCTTCTTCAGAACGATCCCTTCCAGGTACTTGATCAACAAGGTGTTGGGCAGCTCGTCAAGATGGCAACGGAAAAGGGTCGTGCAGCTAGGCCTAGCTTAAAGGTTGGAATATGCGGAGAGCATGGTGGAGAGCCTTCTTCTGTTGCATTTTTCGCAGAGGCCGGACTAGACTATGTTTCATGTTCTCCATTCAGGGTACCTATTGCTAGGCTAGCAGCAGCTCAAGTTGCTGTCTCAGAAAGATCTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEP-utilizers PEP-utilizers_C PPDK_N

Protein Analysis

638

Amino Acids

69.38

Weight (kDa)

5.78

Isoelectric Point (pI)

33.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPDK_N	PF01326	60 - 115	1.4e-10	Pyruvate phosphate dikinase, AMP/ATP-binding domain
PEP-utilizers	PF00391	181 - 248	4.2e-22	PEP-utilising enzyme, mobile domain
PEP-utilizers_C	PF02896	276 - 631	7.4e-92	PEP-utilising enzyme, PEP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15530 AT4G15530 AT4G15530 AT4G15530 AT4G15530 AT4G15530 AT4G15530
fragaria_vesca	FvH4_4g16670
malus_domestica	MD13G1177400.v1.1 MD13G1177500.v1.1 MD16G1179300.v1.1 MD16G1179400.v1.1 MD16G1179500.v1.1
prunus_persica	Prupe.1G146600_v2.0.a1
pyrus_communis	pycom13g15300 pycom16g15050 pycom16g15060 pycom16g15070
rosa_chinensis	RchiOBHm_Chr4g0420131
rosa_laevigata	RLG00000007786
rosa_multiflora	Rmu_sc0001252.1_g000003 Rmu_sc0025222.1_g000001
rosa_roxburghii	Rroxscaffold_5G00362840
rosa_rugosa	Rorug04G0162400 Rorug04G0162500 Rorug04G0162600 Rorug04G0162600
rosa_samantha	Rh4AG223300 Rh4BG225700 Rh4CG236500 Rh4DG222100
rosa_wichuraiana	Rw4G019220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	475
Acc65I	GGTACC	2 cut(s)	1481, 1858
AccB1I	GGYRCC	2 cut(s)	1481, 1858
AccI	GTMKAC	1 cut(s)	330
AccII	CGCG	3 cut(s)	1281, 1332, 1457
AciI	CCGC	8 cut(s)	432, 600, 1022, 1129, 1279, 1281, 1457, 1776
AclWI	GGATC	3 cut(s)	137, 1513, 1670
AcoI	YGGCCR	1 cut(s)	1189
AcsI	RAATTY	3 cut(s)	207, 1092, 1154
AcuI	CTGAAG	3 cut(s)	12, 927, 1652
AcyI	GRCGYC	2 cut(s)	137, 874
AfaI	GTAC	6 cut(s)	25, 301, 1483, 1613, 1689, 1860
AfiI	CCNNNNNNNGG	7 cut(s)	65, 132, 663, 664, 1105, 1271, 1406
AflIII	ACRYGT	2 cut(s)	969, 1464
AgsI	TTSAA	4 cut(s)	505, 1088, 1244, 1343
AjnI	CCWGG	4 cut(s)	475, 552, 1365, 1683
AloI	GAACNNNNNNTCC	4 cut(s)	230, 262, 1550, 1582
Alw21I	GWGCWC	3 cut(s)	453, 940, 1314
Alw26I	GTCTC	3 cut(s)	881, 1357, 1900
Alw44I	GTGCAC	1 cut(s)	936
AlwI	GGATC	3 cut(s)	137, 1513, 1670
AlwNI	CAGNNNCTG	1 cut(s)	1423
AoxI	GGCC	4 cut(s)	1189, 1660, 1751, 1821
ApaLI	GTGCAC	1 cut(s)	936
ApoI	RAATTY	3 cut(s)	207, 1092, 1154
Asp700I	GAANNNNTTC	2 cut(s)	25, 1158
Asp718I	GGTACC	2 cut(s)	1481, 1858
AspLEI	GCGC	2 cut(s)	692, 1334
AspS9I	GGNCC	2 cut(s)	1054, 1581
AsuC2I	CCSGG	1 cut(s)	127
AsuHPI	GGTGA	4 cut(s)	80, 797, 895, 1306
AsuNHI	GCTAGC	1 cut(s)	1873
AvaII	GGWCC	2 cut(s)	1054, 1581
AxyI	CCTNAGG	1 cut(s)	1416
BaeGI	GKGCMC	1 cut(s)	940
BaeI	ACNNNNGTAYC	2 cut(s)	1473, 1506
BanI	GGYRCC	2 cut(s)	1481, 1858
BanII	GRGCYC	1 cut(s)	1314
BbsI	GAAGAC	1 cut(s)	1106
Bbv12I	GWGCWC	3 cut(s)	453, 940, 1314
BccI	CCATC	6 cut(s)	229, 370, 880, 1103, 1471, 1717
BceAI	ACGGC	2 cut(s)	270, 311
BciT130I	CCWGG	4 cut(s)	477, 554, 1367, 1685
BclI	TGATCA	2 cut(s)	1014, 1693
BcnI	CCSGG	1 cut(s)	127
BcoDI	GTCTC	3 cut(s)	881, 1357, 1900
BfmI	CTRYAG	2 cut(s)	1285, 1347
BfuAI	ACCTGC	1 cut(s)	475
BglII	AGATCT	2 cut(s)	1076, 1904
BmcAI	AGTACT	1 cut(s)	25
Bme1390I	CCNGG	5 cut(s)	127, 477, 554, 1367, 1685
Bme18I	GGWCC	2 cut(s)	1054, 1581
BmgT120I	GGNCC	2 cut(s)	1054, 1581
BmiI	GGNNCC	5 cut(s)	384, 1398, 1483, 1582, 1860
BmrFI	CCNGG	5 cut(s)	127, 477, 554, 1367, 1685
BmrI	ACTGGG	2 cut(s)	468, 1433
BmsI	GCATC	4 cut(s)	142, 479, 505, 901
BmtI	GCTAGC	1 cut(s)	1877
BmuI	ACTGGG	2 cut(s)	468, 1433
BpiI	GAAGAC	1 cut(s)	1106
BplI	GAGNNNNNCTC	2 cut(s)	1556, 1588
BpmI	CTGGAG	2 cut(s)	459, 1219
Bpu10I	CCTNAGC	1 cut(s)	105
BpuEI	CTTGAG	2 cut(s)	863, 1869
BpuMI	CCSGG	1 cut(s)	127
Bsa29I	ATCGAT	1 cut(s)	775
BsaBI	GATNNNNATC	1 cut(s)	1517
BsaHI	GRCGYC	2 cut(s)	137, 874
BsaJI	CCNNGG	3 cut(s)	658, 1279, 1366
BsaWI	WCCGGW	1 cut(s)	1117
BsaXI	ACNNNNNCTCC	4 cut(s)	102, 132, 471, 501
Bsc4I	CCNNNNNNNGG	7 cut(s)	65, 132, 663, 664, 1105, 1271, 1406
Bse1I	ACTGG	5 cut(s)	307, 463, 787, 1213, 1428
Bse21I	CCTNAGG	1 cut(s)	1416
Bse3DI	GCAATG	3 cut(s)	287, 1056, 1110
Bse8I	GATNNNNATC	1 cut(s)	1517
BseBI	CCWGG	4 cut(s)	477, 554, 1367, 1685
BseCI	ATCGAT	1 cut(s)	775
BseDI	CCNNGG	3 cut(s)	658, 1279, 1366
BseGI	GGATG	6 cut(s)	157, 279, 409, 696, 991, 1114
BseJI	GATNNNNATC	1 cut(s)	1517
BseLI	CCNNNNNNNGG	7 cut(s)	65, 132, 663, 664, 1105, 1271, 1406
BseMI	GCAATG	3 cut(s)	287, 1056, 1110
BseMII	CTCAG	7 cut(s)	119, 1209, 1377, 1430, 1464, 1554, 1911
BseNI	ACTGG	5 cut(s)	307, 463, 787, 1213, 1428
BseRI	GAGGAG	1 cut(s)	807
BseSI	GKGCMC	1 cut(s)	940
BsgI	GTGCAG	2 cut(s)	1185, 1764
Bsh1236I	CGCG	3 cut(s)	1281, 1332, 1457
Bsh1285I	CGRYCG	1 cut(s)	779
BshFI	GGCC	4 cut(s)	1191, 1662, 1753, 1823
BshNI	GGYRCC	2 cut(s)	1481, 1858
BshVI	ATCGAT	1 cut(s)	775
BsiEI	CGRYCG	1 cut(s)	779
BsiHKAI	GWGCWC	3 cut(s)	453, 940, 1314
BsiSI	CCGG	4 cut(s)	126, 821, 1118, 1824
BslFI	GGGAC	3 cut(s)	46, 1440, 1594
BslI	CCNNNNNNNGG	7 cut(s)	65, 132, 663, 664, 1105, 1271, 1406
BsmAI	GTCTC	3 cut(s)	881, 1357, 1900
BsmBI	CGTCTC	1 cut(s)	881
BsmFI	GGGAC	3 cut(s)	46, 1440, 1594
BsnI	GGCC	4 cut(s)	1191, 1662, 1753, 1823
Bsp1286I	GDGCHC	3 cut(s)	453, 940, 1314
BspACI	CCGC	8 cut(s)	432, 600, 1022, 1129, 1279, 1281, 1457, 1776
BspANI	GGCC	4 cut(s)	1191, 1662, 1753, 1823
BspCNI	CTCAG	7 cut(s)	118, 1210, 1378, 1429, 1465, 1555, 1910
BspDI	ATCGAT	1 cut(s)	775
BspFNI	CGCG	3 cut(s)	1281, 1332, 1457
BspHI	TCATGA	1 cut(s)	1150
BspLI	GGNNCC	5 cut(s)	384, 1398, 1483, 1582, 1860
BspMAI	CTGCAG	2 cut(s)	1289, 1351
BspMI	ACCTGC	1 cut(s)	475
BspOI	GCTAGC	1 cut(s)	1877
BspPI	GGATC	3 cut(s)	137, 1513, 1670
BspT107I	GGYRCC	2 cut(s)	1481, 1858
BsrDI	GCAATG	3 cut(s)	287, 1056, 1110
BsrI	ACTGG	5 cut(s)	307, 463, 787, 1213, 1428
BssECI	CCNNGG	3 cut(s)	658, 1279, 1366
BssNI	GRCGYC	2 cut(s)	137, 874
Bst2UI	CCWGG	4 cut(s)	477, 554, 1367, 1685
Bst4CI	ACNGT	8 cut(s)	203, 253, 417, 742, 935, 1451, 1489, 1616
BstACI	GRCGYC	2 cut(s)	137, 874
BstAPI	GCANNNNNTGC	1 cut(s)	515
BstC8I	GCNNGC	9 cut(s)	170, 363, 453, 531, 597, 1289, 1326, 1330, 1875
BstDEI	CTNAG	7 cut(s)	105, 1218, 1386, 1416, 1473, 1563, 1897
BstDSI	CCRYGG	2 cut(s)	658, 1279
BstEII	GGTNACC	1 cut(s)	462
BstF5I	GGATG	6 cut(s)	157, 279, 409, 696, 991, 1114
BstFNI	CGCG	3 cut(s)	1281, 1332, 1457
BstHHI	GCGC	2 cut(s)	692, 1334
BstMAI	GTCTC	3 cut(s)	881, 1357, 1900
BstMCI	CGRYCG	1 cut(s)	779
BstMWI	GCNNNNNNNGC	8 cut(s)	515, 653, 920, 1538, 1559, 1814, 1874, 1889
BstNI	CCWGG	4 cut(s)	477, 554, 1367, 1685
BstNSI	RCATGY	5 cut(s)	172, 365, 533, 599, 973
BstPI	GGTNACC	1 cut(s)	462
BstSCI	CCNGG	5 cut(s)	125, 475, 552, 1365, 1683
BstSFI	CTRYAG	2 cut(s)	1285, 1347
BstSLI	GKGCMC	1 cut(s)	940
BstUI	CGCG	3 cut(s)	1281, 1332, 1457
BstV2I	GAAGAC	1 cut(s)	1106
BstX2I	RGATCY	3 cut(s)	1076, 1518, 1904
BstYI	RGATCY	3 cut(s)	1076, 1518, 1904
Bsu15I	ATCGAT	1 cut(s)	775
Bsu36I	CCTNAGG	1 cut(s)	1416
BsuRI	GGCC	4 cut(s)	1191, 1662, 1753, 1823
BsuTUI	ATCGAT	1 cut(s)	775
BtgI	CCRYGG	2 cut(s)	658, 1279
BtsCI	GGATG	6 cut(s)	157, 279, 409, 696, 991, 1114
BtsIMutI	CAGTG	2 cut(s)	456, 1456
BveI	ACCTGC	1 cut(s)	475
Cac8I	GCNNGC	9 cut(s)	170, 363, 453, 531, 597, 1289, 1326, 1330, 1875
CaiI	CAGNNNCTG	1 cut(s)	1423
CciI	TCATGA	1 cut(s)	1150
CfoI	GCGC	2 cut(s)	692, 1334
Cfr13I	GGNCC	2 cut(s)	1054, 1581
Cfr42I	CCGCGG	1 cut(s)	1282
ClaI	ATCGAT	1 cut(s)	775
CseI	GACGC	2 cut(s)	145, 863
Csp6I	GTAC	6 cut(s)	24, 300, 1482, 1612, 1688, 1859
CviQI	GTAC	6 cut(s)	24, 300, 1482, 1612, 1688, 1859
DdeI	CTNAG	7 cut(s)	105, 1218, 1386, 1416, 1473, 1563, 1897
EaeI	YGGCCR	1 cut(s)	1189
EciI	GGCGGA	1 cut(s)	1118
Ecl136II	GAGCTC	1 cut(s)	1312
Eco147I	AGGCCT	2 cut(s)	1662, 1753
Eco24I	GRGCYC	1 cut(s)	1314
Eco32I	GATATC	1 cut(s)	1299
Eco47I	GGWCC	2 cut(s)	1054, 1581
Eco53kI	GAGCTC	1 cut(s)	1312
Eco57I	CTGAAG	3 cut(s)	12, 927, 1652
Eco81I	CCTNAGG	1 cut(s)	1416
Eco91I	GGTNACC	1 cut(s)	462
EcoICRI	GAGCTC	1 cut(s)	1312
EcoO65I	GGTNACC	1 cut(s)	462
EcoRII	CCWGG	4 cut(s)	475, 552, 1365, 1683
EcoRV	GATATC	1 cut(s)	1299
EcoT22I	ATGCAT	1 cut(s)	597
EcoT38I	GRGCYC	1 cut(s)	1314
Esp3I	CGTCTC	1 cut(s)	881
FalI	AAGNNNNNCTT	2 cut(s)	1650, 1682
FaqI	GGGAC	3 cut(s)	46, 1440, 1594
FbaI	TGATCA	2 cut(s)	1014, 1693
FblI	GTMKAC	1 cut(s)	330
FokI	GGATG	6 cut(s)	164, 286, 396, 683, 998, 1121
FriOI	GRGCYC	1 cut(s)	1314
GlaI	GCGC	2 cut(s)	691, 1333
GsuI	CTGGAG	2 cut(s)	459, 1219
HaeIII	GGCC	4 cut(s)	1191, 1662, 1753, 1823
HapII	CCGG	4 cut(s)	126, 821, 1118, 1824
HgaI	GACGC	2 cut(s)	145, 863
HhaI	GCGC	2 cut(s)	692, 1334
Hin1I	GRCGYC	2 cut(s)	137, 874
Hin6I	GCGC	2 cut(s)	690, 1332
HinP1I	GCGC	2 cut(s)	690, 1332
HincII	GTYRAC	1 cut(s)	1462
HindII	GTYRAC	1 cut(s)	1462
HindIII	AAGCTT	2 cut(s)	77, 177
HinfI	GANTC	3 cut(s)	424, 521, 609
HpaI	GTTAAC	1 cut(s)	1462
HpaII	CCGG	4 cut(s)	126, 821, 1118, 1824
HphI	GGTGA	4 cut(s)	80, 797, 895, 1306
Hpy166II	GTNNAC	6 cut(s)	48, 249, 331, 938, 1261, 1462
Hpy188I	TCNGA	9 cut(s)	701, 985, 1074, 1081, 1255, 1409, 1474, 1671, 1900
Hpy8I	GTNNAC	6 cut(s)	48, 249, 331, 938, 1261, 1462
HpyAV	CCTTC	9 cut(s)	338, 746, 1036, 1082, 1160, 1585, 1673, 1690, 1806
HpyCH4III	ACNGT	8 cut(s)	203, 253, 417, 742, 935, 1451, 1489, 1616
HpyCH4IV	ACGT	1 cut(s)	1464
HpyF10VI	GCNNNNNNNGC	8 cut(s)	515, 653, 920, 1538, 1559, 1814, 1874, 1889
HpyF3I	CTNAG	7 cut(s)	105, 1218, 1386, 1416, 1473, 1563, 1897
HpySE526I	ACGT	1 cut(s)	1464
Hsp92I	GRCGYC	2 cut(s)	137, 874
HspAI	GCGC	2 cut(s)	690, 1332
KpnI	GGTACC	2 cut(s)	1485, 1862
Ksp22I	TGATCA	2 cut(s)	1014, 1693
KspAI	GTTAAC	1 cut(s)	1462
KspI	CCGCGG	1 cut(s)	1282
LmnI	GCTCC	3 cut(s)	187, 479, 1177
LweI	GCATC	4 cut(s)	142, 479, 505, 901
MaeII	ACGT	1 cut(s)	1464
MaeIII	GTNAC	3 cut(s)	462, 1120, 1169
MflI	RGATCY	3 cut(s)	1076, 1518, 1904
MhlI	GDGCHC	3 cut(s)	453, 940, 1314
MluCI	AATT	5 cut(s)	163, 207, 1092, 1154, 1247
MmeI	TCCRAC	5 cut(s)	271, 452, 1387, 1483, 1747
MnlI	CCTC	9 cut(s)	617, 828, 1032, 1067, 1152, 1213, 1425, 1661, 1813
Mph1103I	ATGCAT	1 cut(s)	597
MroXI	GAANNNNTTC	2 cut(s)	25, 1158
MseI	TTAA	3 cut(s)	318, 1461, 1760
MslI	CAYNNNNRTG	2 cut(s)	1319, 1598
MspA1I	CMGCKG	3 cut(s)	602, 647, 1281
MspI	CCGG	4 cut(s)	126, 821, 1118, 1824
MspR9I	CCNGG	5 cut(s)	127, 477, 554, 1367, 1685
MvaI	CCWGG	4 cut(s)	477, 554, 1367, 1685
MvnI	CGCG	3 cut(s)	1281, 1332, 1457
MwoI	GCNNNNNNNGC	8 cut(s)	515, 653, 920, 1538, 1559, 1814, 1874, 1889
NciI	CCSGG	1 cut(s)	127
NheI	GCTAGC	1 cut(s)	1873
NlaIV	GGNNCC	5 cut(s)	384, 1398, 1483, 1582, 1860
NsiI	ATGCAT	1 cut(s)	597
NspI	RCATGY	5 cut(s)	172, 365, 533, 599, 973
PaeI	GCATGC	4 cut(s)	172, 365, 533, 599
PagI	TCATGA	1 cut(s)	1150
PceI	AGGCCT	2 cut(s)	1662, 1753
PciI	ACATGT	1 cut(s)	969
PcsI	WCGNNNNNNNCGW	1 cut(s)	1461
PdmI	GAANNNNTTC	2 cut(s)	25, 1158
PfeI	GAWTC	3 cut(s)	424, 521, 609
PfoI	TCCNGGA	1 cut(s)	475
Ple19I	CGATCG	1 cut(s)	779
PscI	ACATGT	1 cut(s)	969
Psp124BI	GAGCTC	1 cut(s)	1314
Psp6I	CCWGG	4 cut(s)	475, 552, 1365, 1683
PspEI	GGTNACC	1 cut(s)	462
PspGI	CCWGG	4 cut(s)	475, 552, 1365, 1683
PspN4I	GGNNCC	5 cut(s)	384, 1398, 1483, 1582, 1860
PspPI	GGNCC	2 cut(s)	1054, 1581
PstI	CTGCAG	2 cut(s)	1289, 1351
PstNI	CAGNNNCTG	1 cut(s)	1423
PsuI	RGATCY	3 cut(s)	1076, 1518, 1904
PvuI	CGATCG	1 cut(s)	779
PvuII	CAGCTG	1 cut(s)	647
RsaI	GTAC	6 cut(s)	25, 301, 1483, 1613, 1689, 1860
RsaNI	GTAC	6 cut(s)	24, 300, 1482, 1612, 1688, 1859
RseI	CAYNNNNRTG	2 cut(s)	1319, 1598
SacI	GAGCTC	1 cut(s)	1314
SacII	CCGCGG	1 cut(s)	1282
SaqAI	TTAA	3 cut(s)	318, 1461, 1760
Sau96I	GGNCC	2 cut(s)	1054, 1581
ScaI	AGTACT	1 cut(s)	25
ScrFI	CCNGG	5 cut(s)	127, 477, 554, 1367, 1685
SduI	GDGCHC	3 cut(s)	453, 940, 1314
SfaNI	GCATC	4 cut(s)	142, 479, 505, 901
SfcI	CTRYAG	2 cut(s)	1285, 1347
Sfr303I	CCGCGG	1 cut(s)	1282
SgrBI	CCGCGG	1 cut(s)	1282
SinI	GGWCC	2 cut(s)	1054, 1581
SmiMI	CAYNNNNRTG	2 cut(s)	1319, 1598
SmlI	CTYRAG	2 cut(s)	878, 1884
SmoI	CTYRAG	2 cut(s)	878, 1884
SphI	GCATGC	4 cut(s)	172, 365, 533, 599
Sse9I	AATT	5 cut(s)	163, 207, 1092, 1154, 1247
SseBI	AGGCCT	2 cut(s)	1662, 1753
SsiI	CCGC	8 cut(s)	432, 600, 1022, 1129, 1279, 1281, 1457, 1776
SstI	GAGCTC	1 cut(s)	1314
StuI	AGGCCT	2 cut(s)	1662, 1753
StyD4I	CCNGG	5 cut(s)	125, 475, 552, 1365, 1683
TaaI	ACNGT	8 cut(s)	203, 253, 417, 742, 935, 1451, 1489, 1616
TaiI	ACGT	1 cut(s)	1467
TaqI	TCGA	3 cut(s)	775, 779, 1515
TasI	AATT	5 cut(s)	163, 207, 1092, 1154, 1247
TatI	WGTACW	1 cut(s)	23
TauI	GCSGC	3 cut(s)	602, 1025, 1284
TfiI	GAWTC	3 cut(s)	424, 521, 609
Tru1I	TTAA	3 cut(s)	318, 1461, 1760
Tru9I	TTAA	3 cut(s)	318, 1461, 1760
TscAI	CASTG	2 cut(s)	463, 1456
TspDTI	ATGAA	6 cut(s)	173, 398, 765, 1139, 1167, 1830
TspGWI	ACGGA	2 cut(s)	1088, 1745
TspRI	CASTG	2 cut(s)	463, 1456
VneI	GTGCAC	1 cut(s)	936
VpaK11BI	GGWCC	2 cut(s)	1054, 1581
XapI	RAATTY	3 cut(s)	207, 1092, 1154
XceI	RCATGY	5 cut(s)	172, 365, 533, 599, 973
XmiI	GTMKAC	1 cut(s)	330
XmnI	GAANNNNTTC	2 cut(s)	25, 1158
ZrmI	AGTACT	1 cut(s)	25
Zsp2I	ATGCAT	1 cut(s)	597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.