Rorug04G0162600
MYB Family

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000244
Physical Location & Seq
Reverse (-)
28315863 .. 28320905
5043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0162600.1

Sequence Viewer

Length: 1728 bp
ATGTTGTCTACATCCAAACATGGAGCTCTCACTCTTTCTTCAATTCTCCTCAAACATCTCACACCCCTTACAGCATTTTCACCATTCTCTTCAAAACCCGATTCAAATTTCACAACCCCAAATCAGATTGCCACAATCCCAAAACAACCCGCTGCAAGAACAAGAGTCCCACAGGTTTCAGACCCAGTAAGTGCTTCTGTTGTAGATTCAGTATGTTCTTTACTTTCTAAAGAAACCGCCAGTGTTGATAGTTTGTTGAGTGGTTTCAAACACGAGTTGAGTTCAGAAGTGGTGCTTCAAGTTTTGATGAATTATAAGCAGCTGGGAAGGAGAAAGACATTGGACTTCTTTTCTTGGGCTGGGTTTCAAATGCATTTTCAGTTTGATGACTGTGTGGTTGAGTACATGGCTGATTTCTTAGGTAGGAGGAAGCTCTTTGATGACATGAAGTGTCTTTTATTGACTGTGTCCTTGCACAGGGGTCGGGTTTCGTGTCGAACAGTTTCGACTTGTATTAGGTTTCTGGGTAGGCAGGGGAGGATTAAAGAAGCACTTTGCGTGTTTGAAGAAATGGAATCTAAATTTGGGTGTAAACCTGATAATCTTGTGTACAATAATGTGCTTTATGTGCTTTGTAAGAAGGTGTCATCTGGGCATTTGATTGATTTTGCGCTTGCAGTTTTTCGGAGAATTGAATCCCCTGATATGTATTCGTATAGTAATATGCTTGTTGGTTTGTGTAAATTTGGTAGATTTGAGACTGCTGTTGAAGTTTTTGGTGAAATGTGTGGGACTGGTTTGGTTCCTACTAGGTCTGCAGTGAATGTTCTTATTGGAGAGTTGAGTTTATTGAGTGCGAAAGAAGCAGCTGTTGCTAAAGTAAGAGTGAAAAATGTTCGTAGGCCGTTTAAGATTTTGGTTCCAAATGTGCATGAAAAGAGTGGTGCTATCCAGCCTGCACTTGGAGTGTTTTGGGAAGTTTATAAACTAGGCTTATTACCTAGTACTTTTGTCATAATCCGACTTCTATCAGAGCTTTGTCAATTGGGAAAAATGGAAGAGGCTGTTCGGGTCTTGAAGGCTGTTGAGGGTAGGAAGCTGAGTTGCGTGGAGGAGGGCTACTGTATTTTGATGAAGGGATTGTGTGAACACTGCTGCGTTGAGGAAGCTAGTCATTTGTTTGGGAGGATGCTCTCTCAGGGCATGAAGCCAAAGTTGACTATTTATAATTCTATTATCTGCATGCTATGCAAACTAGGGAATTTGGATGGTGCTGAAAGTGTCTTTAAGATGATGAACAAGAAGAGGCGTCTTCCGGATAGTTGTACTTATTCTGCATTGGTCCACGCTTATTGTGAAGCTGGAAAATGGAAAGCTGCTTATGACTTGATGATAGAAATGCTCGGTTTGGGCTGCTCTCCGCCTTTTCACACTTATAGCTTAGTGGATAAACTTTTGAGAGAAAATGAACAAACAGATTTGTGTTTTAAATTGGAAACGAAGTTGGAAACCCAGATCTTGGAGAAGCTATGCAAAGATGGTCGATTAGAGGATGCGTATGAGAAGCTAAAGTCAATGATTGAAAAGGGGTTTTACCCACCAGTTTATGCGAGAGATGCTTTTAAGAATGCATTTCGGAAGTATGGAAAATTAAAAATAGCTCAGGATTTGTTACAGACGATAGATGACTTAGACAACAATGAGGAGAAACAACTTAGCTGTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

575

Amino Acids

64.65

Weight (kDa)

8.75

Isoelectric Point (pI)

37.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 169 - 213 9.2e-07 PPR repeat family
PPR_1 PF12854 233 - 262 7.2e-06 PPR repeat
PPR_2 PF13041 234 - 281 2e-06 PPR repeat family
PPR_long PF17177 387 - 472 4.4e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 395 - 451 1.3e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 401 - 432 2.2e-06 PPR repeat
PPR_2 PF13041 406 - 452 5.5e-12 PPR repeat family
PPR PF01535 408 - 435 7e-06 PPR repeat
PPR_2 PF13041 439 - 480 3.1e-09 PPR repeat family
PPR_1 PF12854 439 - 467 2.1e-07 PPR repeat
PPR PF01535 443 - 472 6.4e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000244)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02550 AT4G02550 AT4G02550 AT4G02550 AT4G02550
fragaria_vesca FvH4_1g20120 FvH4_2g13781 FvH4_4g15662 FvH4_6g32032
malus_domestica MD02G1272200.v1.1 MD04G1174600.v1.1 MD07G1041200.v1.1 MD07G1064000.v1.1
prunus_persica Prupe.1G245200_v2.0.a1 Prupe.1G287900_v2.0.a1 Prupe.2G077600_v2.0.a1 Prupe.2G078000_v2.0.a1 Prupe.3G281200_v2.0.a1 Prupe.4G256700_v2.0.a1 Prupe.5G014200_v2.0.a1 Prupe.5G014400_v2.0.a1 Prupe.5G049300_v2.0.a1 Prupe.5G049400_v2.0.a1 Prupe.6G167700_v2.0.a1 Prupe.7G027800_v2.0.a1
pyrus_communis pycom02g23280 pycom07g02860 pycom07g04940 pycom07g04960 pycom07g04980
rosa_chinensis RchiOBHm_Chr1g0330381 RchiOBHm_Chr2g0139691 RchiOBHm_Chr2g0145201 RchiOBHm_Chr3g0485151 RchiOBHm_Chr4g0405761 RchiOBHm_Chr4g0417571 RchiOBHm_Chr5g0022261 RchiOBHm_Chr5g0053961 RchiOBHm_Chr6g0298071 RchiOBHm_Chr7g0231381
rosa_laevigata RLG00000002919 RLG00000009166 RLG00000013803 RLG00000013816 RLG00000015126 RLG00000017423 RLG00000019811 RLG00000019826 RLG00000028831 RLG00000029802 RLG00000029840 RLG00000029955 RLG00000029956 RLG00000034858
rosa_multiflora Rmu_co8446275.1_g000001 Rmu_sc0000212.1_g000021 Rmu_sc0000945.1_g000025 Rmu_sc0001512.1_g000009 Rmu_sc0003482.1_g000004 Rmu_sc0004039.1_g000001 Rmu_sc0004390.1_g000008 Rmu_sc0004711.1_g000022 Rmu_sc0005887.1_g000001 Rmu_sc0007795.1_g000002 Rmu_sc0008148.1_g000034 Rmu_sc0008927.1_g000001 Rmu_sc0009714.1_g000007 Rmu_sc0009806.1_g000002 Rmu_sc0012995.1_g000005 Rmu_sc0014278.1_g000005 Rmu_sc0023501.1_g000002
rosa_roxburghii Rroxscaffold_2G00105280 Rroxscaffold_2G00111200 Rroxscaffold_2G00117910 Rroxscaffold_3G00235020 Rroxscaffold_5G00350240 Rroxscaffold_5G00381630 Rroxscaffold_6G00403970 Rroxscaffold_7G00158580
rosa_rugosa Rorug01G0012500 Rorug02G0357800 Rorug02G0359000 Rorug02G0359100 Rorug02G0359200 Rorug04G0061200 Rorug04G0162600 Rorug05G0271800 Rorug06G0213500 Rorug06G0213600 Rorug06G0332900 Rorug07G0148200
rosa_samantha Rh1AG259900 Rh1AG410300 Rh2AG397400 Rh2AG397500 Rh2AG409000 Rh2BG187200 Rh2BG417700 Rh2BG419500 Rh2BG460700 Rh2CG384200 Rh2CG384300 Rh2CG395100 Rh2DG065900 Rh2DG428800 Rh3CG301800 Rh3DG242800 Rh4BG141800 Rh4CG022100 Rh5BG548900 Rh5CG571800 Rh6AG328800 Rh6CG021500 Rh6CG066400 Rh6CG237200 Rh6DG021700 Rh6DG063300 Rh7AG131700 Rh7BG051800 Rh7CG385100 Rh7DG025500 Rh7DG025600
rosa_wichuraiana Rw0G007310 Rw0G016860 Rw2G029630 Rw2G033470 Rw2G034500 Rw3G014930 Rw3G019520 Rw4G010080 Rw4G016450 Rw5G023350 Rw5G041160 Rw5G048810 Rw6G006750 Rw6G017100 Rw7G031010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 315, 984, 1227
AccB7I CCANNNNNTGG 1 cut(s) 1519
AccI GTMKAC 1 cut(s) 8
AccIII TCCGGA 1 cut(s) 1315
AciI CCGC 3 cut(s) 150, 237, 1421
AcsI RAATTY 4 cut(s) 106, 581, 743, 1261
AcyI GRCGYC 1 cut(s) 1309
AfaI GTAC 4 cut(s) 404, 611, 1006, 1327
AfiI CCNNNNNNNGG 3 cut(s) 477, 962, 1519
AjuI GAANNNNNNNTTGG 2 cut(s) 567, 599
Alw21I GWGCWC 1 cut(s) 28
Alw26I GTCTC 1 cut(s) 752
Aor13HI TCCGGA 1 cut(s) 1315
AoxI GGCC 1 cut(s) 902
ApeKI GCWGC 6 cut(s) 152, 319, 866, 1155, 1376, 1413
ApoI RAATTY 4 cut(s) 106, 581, 743, 1261
Asp700I GAANNNNTTC 1 cut(s) 502
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 1 cut(s) 1342
AsuHPI GGTGA 2 cut(s) 72, 791
AvaII GGWCC 1 cut(s) 1342
BanII GRGCYC 1 cut(s) 28
BauI CACGAG 1 cut(s) 272
BbsI GAAGAC 1 cut(s) 1304
Bbv12I GWGCWC 1 cut(s) 28
BbvI GCAGC 6 cut(s) 139, 331, 878, 1142, 1363, 1400
BccI CCATC 2 cut(s) 1262, 1532
BceAI ACGGC 1 cut(s) 889
BcgI CGANNNNNNTGC 2 cut(s) 464, 498
BcoDI GTCTC 1 cut(s) 752
BfaI CTAG 5 cut(s) 810, 989, 1002, 1170, 1256
BfmI CTRYAG 1 cut(s) 816
BglII AGATCT 1 cut(s) 1515
BisI GCNGC 6 cut(s) 153, 320, 867, 1156, 1377, 1414
BlsI GCNGC 6 cut(s) 154, 321, 868, 1157, 1378, 1415
BmcAI AGTACT 1 cut(s) 1006
Bme18I GGWCC 1 cut(s) 1342
BmgT120I GGNCC 1 cut(s) 1342
BmiI GGNNCC 2 cut(s) 804, 921
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 3 cut(s) 1179, 1543, 1606
BmuI ACTGGG 1 cut(s) 179
BpiI GAAGAC 1 cut(s) 1304
Bpu10I CCTNAGC 1 cut(s) 1662
BsaHI GRCGYC 1 cut(s) 1309
BsaWI WCCGGW 1 cut(s) 1315
Bsc4I CCNNNNNNNGG 3 cut(s) 477, 962, 1519
Bse1I ACTGG 4 cut(s) 185, 240, 799, 1601
BseAI TCCGGA 1 cut(s) 1315
BseGI GGATG 4 cut(s) 11, 1194, 1273, 1558
BseLI CCNNNNNNNGG 3 cut(s) 477, 962, 1519
BseMII CTCAG 3 cut(s) 1091, 1211, 1676
BseNI ACTGG 4 cut(s) 185, 240, 799, 1601
BseRI GAGGAG 3 cut(s) 38, 1127, 1718
BseXI GCAGC 6 cut(s) 139, 331, 878, 1142, 1363, 1400
BseYI CCCAGC 2 cut(s) 322, 359
BsgI GTGCAG 1 cut(s) 942
BshFI GGCC 1 cut(s) 904
BsiHKAI GWGCWC 1 cut(s) 28
BsiSI CCGG 1 cut(s) 1316
BslFI GGGAC 2 cut(s) 152, 805
BslI CCNNNNNNNGG 3 cut(s) 477, 962, 1519
BsmAI GTCTC 1 cut(s) 752
BsmFI GGGAC 2 cut(s) 152, 805
BsmI GAATGC 1 cut(s) 1633
BsnI GGCC 1 cut(s) 904
Bsp1286I GDGCHC 1 cut(s) 28
Bsp13I TCCGGA 1 cut(s) 1315
Bsp1407I TGTACA 1 cut(s) 609
Bsp143I GATC 1 cut(s) 1515
BspACI CCGC 3 cut(s) 150, 237, 1421
BspANI GGCC 1 cut(s) 904
BspCNI CTCAG 3 cut(s) 1092, 1210, 1675
BspEI TCCGGA 1 cut(s) 1315
BspLI GGNNCC 2 cut(s) 804, 921
BspMAI CTGCAG 1 cut(s) 820
BsrGI TGTACA 1 cut(s) 609
BsrI ACTGG 4 cut(s) 185, 240, 799, 1601
BssMI GATC 1 cut(s) 1515
BssNI GRCGYC 1 cut(s) 1309
BssSI CACGAG 1 cut(s) 272
Bst2BI CACGAG 1 cut(s) 272
Bst4CI ACNGT 4 cut(s) 392, 466, 502, 1124
Bst6I CTCTTC 3 cut(s) 94, 1053, 1298
BstACI GRCGYC 1 cut(s) 1309
BstAPI GCANNNNNTGC 2 cut(s) 872, 1248
BstAUI TGTACA 1 cut(s) 609
BstC8I GCNNGC 3 cut(s) 675, 957, 1244
BstDEI CTNAG 7 cut(s) 418, 1100, 1197, 1441, 1662, 1690, 1715
BstENI CCTNNNNNAGG 1 cut(s) 475
BstF5I GGATG 4 cut(s) 11, 1194, 1273, 1558
BstHHI GCGC 1 cut(s) 673
BstKTI GATC 1 cut(s) 1518
BstMAI GTCTC 1 cut(s) 752
BstMBI GATC 1 cut(s) 1515
BstMWI GCNNNNNNNGC 5 cut(s) 628, 863, 872, 1248, 1616
BstNSI RCATGY 1 cut(s) 1246
BstSFI CTRYAG 1 cut(s) 816
BstV1I GCAGC 6 cut(s) 139, 331, 878, 1142, 1363, 1400
BstV2I GAAGAC 1 cut(s) 1304
BstX2I RGATCY 1 cut(s) 1515
BstYI RGATCY 1 cut(s) 1515
BsuRI GGCC 1 cut(s) 904
BtsCI GGATG 4 cut(s) 11, 1194, 1273, 1558
BtsI GCAGTG 2 cut(s) 825, 1150
BtsIMutI CAGTG 3 cut(s) 247, 825, 1150
Cac8I GCNNGC 3 cut(s) 675, 957, 1244
CfoI GCGC 1 cut(s) 673
Cfr13I GGNCC 1 cut(s) 1342
CseI GACGC 1 cut(s) 1298
Csp6I GTAC 4 cut(s) 403, 610, 1005, 1326
CspCI CAANNNNNGTGG 2 cut(s) 1334, 1369
CviAII CATG 6 cut(s) 20, 406, 445, 932, 1204, 1243
CviQI GTAC 4 cut(s) 403, 610, 1005, 1326
DdeI CTNAG 7 cut(s) 418, 1100, 1197, 1441, 1662, 1690, 1715
DpnI GATC 1 cut(s) 1517
DpnII GATC 1 cut(s) 1515
DraI TTTAAA 1 cut(s) 1489
Eam1104I CTCTTC 3 cut(s) 94, 1053, 1298
EarI CTCTTC 3 cut(s) 94, 1053, 1298
EciI GGCGGA 1 cut(s) 1410
Ecl136II GAGCTC 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 28
Eco47I GGWCC 1 cut(s) 1342
Eco53kI GAGCTC 1 cut(s) 26
EcoICRI GAGCTC 1 cut(s) 26
EcoNI CCTNNNNNAGG 1 cut(s) 475
EcoT22I ATGCAT 2 cut(s) 375, 1633
EcoT38I GRGCYC 1 cut(s) 28
FaeI CATG 6 cut(s) 23, 409, 448, 935, 1207, 1246
FalI AAGNNNNNCTT 4 cut(s) 279, 311, 537, 569
FaqI GGGAC 2 cut(s) 152, 805
FatI CATG 6 cut(s) 19, 405, 444, 931, 1203, 1242
FauI CCCGC 1 cut(s) 157
FblI GTMKAC 1 cut(s) 8
Fnu4HI GCNGC 6 cut(s) 153, 320, 867, 1156, 1377, 1414
FokI GGATG 3 cut(s) 1201, 1280, 1565
FriOI GRGCYC 1 cut(s) 28
Fsp4HI GCNGC 6 cut(s) 153, 320, 867, 1156, 1377, 1414
FspBI CTAG 5 cut(s) 810, 989, 1002, 1170, 1256
GlaI GCGC 1 cut(s) 672
GluI GCNGC 6 cut(s) 153, 320, 867, 1156, 1377, 1414
GsaI CCCAGC 2 cut(s) 326, 363
HaeIII GGCC 1 cut(s) 904
HapII CCGG 1 cut(s) 1316
HgaI GACGC 1 cut(s) 1298
HhaI GCGC 1 cut(s) 673
Hin1I GRCGYC 1 cut(s) 1309
Hin1II CATG 6 cut(s) 23, 409, 448, 935, 1207, 1246
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 1 cut(s) 1218
HindII GTYRAC 1 cut(s) 1218
HinfI GANTC 5 cut(s) 101, 165, 206, 575, 695
HpaII CCGG 1 cut(s) 1316
HphI GGTGA 2 cut(s) 72, 791
Hpy166II GTNNAC 6 cut(s) 9, 593, 610, 1148, 1218, 1345
Hpy188I TCNGA 7 cut(s) 126, 181, 286, 687, 1022, 1033, 1638
Hpy188III TCNNGA 3 cut(s) 1075, 1316, 1664
Hpy8I GTNNAC 6 cut(s) 9, 593, 610, 1148, 1218, 1345
HpyAV CCTTC 4 cut(s) 321, 634, 1072, 1129
HpyCH4III ACNGT 4 cut(s) 392, 466, 502, 1124
HpyF10VI GCNNNNNNNGC 5 cut(s) 628, 863, 872, 1248, 1616
HpyF3I CTNAG 7 cut(s) 418, 1100, 1197, 1441, 1662, 1690, 1715
Hsp92I GRCGYC 1 cut(s) 1309
Hsp92II CATG 6 cut(s) 23, 409, 448, 935, 1207, 1246
HspAI GCGC 1 cut(s) 671
Kpn2I TCCGGA 1 cut(s) 1315
Kzo9I GATC 1 cut(s) 1515
LmnI GCTCC 1 cut(s) 23
Lsp1109I GCAGC 6 cut(s) 139, 331, 878, 1142, 1363, 1400
LweI GCATC 3 cut(s) 1179, 1543, 1606
MaeI CTAG 5 cut(s) 810, 989, 1002, 1170, 1256
MaeIII GTNAC 1 cut(s) 1671
MalI GATC 1 cut(s) 1517
MboI GATC 1 cut(s) 1515
MboII GAAGA 6 cut(s) 30, 81, 578, 1070, 1304, 1315
MfeI CAATTG 1 cut(s) 1043
MflI RGATCY 1 cut(s) 1515
MhlI GDGCHC 1 cut(s) 28
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 2 cut(s) 1045, 1485
Mph1103I ATGCAT 2 cut(s) 375, 1633
MroI TCCGGA 1 cut(s) 1315
MroXI GAANNNNTTC 1 cut(s) 502
MseI TTAA 6 cut(s) 543, 909, 1287, 1488, 1623, 1652
MspA1I CMGCKG 3 cut(s) 152, 322, 869
MspI CCGG 1 cut(s) 1316
MunI CAATTG 1 cut(s) 1043
Mva1269I GAATGC 1 cut(s) 1633
MwoI GCNNNNNNNGC 5 cut(s) 628, 863, 872, 1248, 1616
NdeII GATC 1 cut(s) 1515
NlaIII CATG 6 cut(s) 23, 409, 448, 935, 1207, 1246
NlaIV GGNNCC 2 cut(s) 804, 921
NsiI ATGCAT 2 cut(s) 375, 1633
NspI RCATGY 1 cut(s) 1246
PaeI GCATGC 1 cut(s) 1246
PctI GAATGC 1 cut(s) 1633
PdmI GAANNNNTTC 1 cut(s) 502
PfeI GAWTC 4 cut(s) 101, 206, 575, 695
PflFI GACNNNGTC 1 cut(s) 466
PflMI CCANNNNNTGG 1 cut(s) 1519
PkrI GCNGC 6 cut(s) 154, 321, 868, 1157, 1378, 1415
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
PsiI TTATAA 3 cut(s) 315, 984, 1227
Psp124BI GAGCTC 1 cut(s) 28
PspFI CCCAGC 2 cut(s) 322, 359
PspN4I GGNNCC 2 cut(s) 804, 921
PspPI GGNCC 1 cut(s) 1342
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 1 cut(s) 1515
PsyI GACNNNGTC 1 cut(s) 466
PvuII CAGCTG 2 cut(s) 322, 869
RsaI GTAC 4 cut(s) 404, 611, 1006, 1327
RsaNI GTAC 4 cut(s) 403, 610, 1005, 1326
SacI GAGCTC 1 cut(s) 28
SaqAI TTAA 6 cut(s) 543, 909, 1287, 1488, 1623, 1652
SatI GCNGC 6 cut(s) 153, 320, 867, 1156, 1377, 1414
Sau3AI GATC 1 cut(s) 1515
Sau96I GGNCC 1 cut(s) 1342
ScaI AGTACT 1 cut(s) 1006
SchI GAGTC 1 cut(s) 174
SduI GDGCHC 1 cut(s) 28
SfaNI GCATC 3 cut(s) 1179, 1543, 1606
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 1 cut(s) 1342
SphI GCATGC 1 cut(s) 1246
SsiI CCGC 3 cut(s) 150, 237, 1421
SspMI CTAG 5 cut(s) 810, 989, 1002, 1170, 1256
SstI GAGCTC 1 cut(s) 28
TaaI ACNGT 4 cut(s) 392, 466, 502, 1124
TaqI TCGA 3 cut(s) 496, 506, 1543
TatI WGTACW 4 cut(s) 402, 609, 1004, 1325
TfiI GAWTC 4 cut(s) 101, 206, 575, 695
Tru1I TTAA 6 cut(s) 543, 909, 1287, 1488, 1623, 1652
Tru9I TTAA 6 cut(s) 543, 909, 1287, 1488, 1623, 1652
TscAI CASTG 3 cut(s) 247, 825, 1157
TseI GCWGC 6 cut(s) 152, 319, 866, 1155, 1376, 1413
TspDTI ATGAA 7 cut(s) 323, 461, 948, 1148, 1220, 1310, 1482
TspRI CASTG 3 cut(s) 247, 825, 1157
Tth111I GACNNNGTC 1 cut(s) 466
Van91I CCANNNNNTGG 1 cut(s) 1519
VpaK11BI GGWCC 1 cut(s) 1342
XagI CCTNNNNNAGG 1 cut(s) 475
XapI RAATTY 4 cut(s) 106, 581, 743, 1261
XceI RCATGY 1 cut(s) 1246
XcmI CCANNNNNNNNNTGG 1 cut(s) 959
XmiI GTMKAC 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 502
XspI CTAG 5 cut(s) 810, 989, 1002, 1170, 1256
ZrmI AGTACT 1 cut(s) 1006
Zsp2I ATGCAT 2 cut(s) 375, 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.