Rorug02G0359100
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000244
Physical Location & Seq
Forward (+)
45428635 .. 45430900
2266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0359100.1

Sequence Viewer

Length: 1581 bp
ATGGACTCCGGGTCCCTCCAGGGCGAGCGCGAGTTCCAGAACGAGCTCTTCTTCGCCTCCATGCTCGACTCCCGACACGTCATCTCGGTCCTCGGGTTCTCCTCCGATCGGAAACGGCGCCGTATGCTGCTGGTTTACGAGTTCATGAGCAACGGGAACTTGCAGGACGCGCTGCTGCACCGGAAGTGCCCGGAGCTGATGGAGTGGAAGAAGAGGTTTTCGATTATGGTGGATGTAGCTAAAGGCCTTTGCTACCTTCATGGATTGGACCCGCCGGTTGTTCACGGTGACGTCAAGCCGAGTAATGTGCTGCTGGACGGGAGCTTCAATGTGAAGATTGCCGATTTCGGGCTGGCGAGGCTAAAGTCGGAAATTCAGGTTGTGATTGGGGAGGATGTGAAGAAGAGTGAGGGTGTGGTGGTGAAGAAGGAGGAGCTTGAAGACTGTGGCTCTGTGGTTGAGGAAACCGAGAGCGTTAGTGTTGCCACTGCAGGGTTTGAGGATTCGAATTTGGGAGTTGATCAGTCGCCGGAGAGTTTAGTGATCATGCTGCCTGTTTCGCCGGAGACTCGGGTGACGGCGTCACCACCGGAGGAGAATGTGGATAAGGAGGGGGGAGAGAAGCCGAGTGTGAATAAGGATTGGTGGATGAGACAGGAGAATGGGAGTGGTGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGAATGAGAGGCCCACGGCTGCTTCGAGTAGTGAAATGGTGGGGAGGTCGGAGAGGAAGAAGAATAAGAAGAGGAATAGGAAGAGATTGGATTGGTGGATGTCGATGGAGGAGAGTGGGAAAGTTTCGAGCAAGGAGAAGAGGAGGCCTGCCAGGGAATGGTGGAAGGAGGAGTATTGTAAGGAGCTGACAAAGAAGAAAAAGAAGAAGGATAAGAAGCAGAGTAAAGGAATGAGCTTTGATGAGAATGAGAGTGACTGGTGGCCACACGACGATGAATTGTATGCTGAGACCAGGAAGAAGAAGAAGAGTAGGAGCAGGAGTTGGGGGAGTATGAGTAGTATTGATTGGTGGTTGGATGGAATTCGCCGTAATGCTAGTAATAATTCTGCTAGTGGGGAAATTCCTAAAAGCTGTGGCATGAGTAGTACGCCAAGTATGAGAGGAACTGTATGTTATGTTGCCCCCGAATATGGTTTTGGTGGTGATCCTTCAGAATTATGTGATGTTTATAGTTTTGGGGTGTTGTTGTTGGTTGTTATAGCCGGAAGGCGCCCACTTCAGGTAACAAATTCGCCTCTGTCAGAGTTCCAGAGAGCGAATTTGTTGTCTTGGGCACGCCATCTTGCTCGTGCTGGAAAGCTTATTGATCTTGTTGATAAGTCCATTCAGGGTCTGGAGCAAGAACAAGCTCTCCTTTGCATCACTGTGGCATTAGTTTGTTTGCAAAAGATACCTGCTAGCCGGCCTTCAATGAAAGTGGTTGTGGGGATGCTGACTGGTGAGTTAGAACCACCCAAATTACCACCGGAGTTAACCACGTCAGCTCAGTCACGGTTCTCACACAAGTCCCATAGAAAGGTCCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

526

Amino Acids

59.31

Weight (kDa)

8.64

Isoelectric Point (pI)

55.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 9 - 123 1.7e-19 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 10 - 121 2.2e-18 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000244)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G02550 AT4G02550 AT4G02550 AT4G02550 AT4G02550
fragaria_vesca FvH4_1g20120 FvH4_2g13781 FvH4_4g15662 FvH4_6g32032
malus_domestica MD02G1272200.v1.1 MD04G1174600.v1.1 MD07G1041200.v1.1 MD07G1064000.v1.1
prunus_persica Prupe.1G245200_v2.0.a1 Prupe.1G287900_v2.0.a1 Prupe.2G077600_v2.0.a1 Prupe.2G078000_v2.0.a1 Prupe.3G281200_v2.0.a1 Prupe.4G256700_v2.0.a1 Prupe.5G014200_v2.0.a1 Prupe.5G014400_v2.0.a1 Prupe.5G049300_v2.0.a1 Prupe.5G049400_v2.0.a1 Prupe.6G167700_v2.0.a1 Prupe.7G027800_v2.0.a1
pyrus_communis pycom02g23280 pycom07g02860 pycom07g04940 pycom07g04960 pycom07g04980
rosa_chinensis RchiOBHm_Chr1g0330381 RchiOBHm_Chr2g0139691 RchiOBHm_Chr2g0145201 RchiOBHm_Chr3g0485151 RchiOBHm_Chr4g0405761 RchiOBHm_Chr4g0417571 RchiOBHm_Chr5g0022261 RchiOBHm_Chr5g0053961 RchiOBHm_Chr6g0298071 RchiOBHm_Chr7g0231381
rosa_laevigata RLG00000002919 RLG00000009166 RLG00000013803 RLG00000013816 RLG00000015126 RLG00000017423 RLG00000019811 RLG00000019826 RLG00000028831 RLG00000029802 RLG00000029840 RLG00000029955 RLG00000029956 RLG00000034858
rosa_multiflora Rmu_co8446275.1_g000001 Rmu_sc0000212.1_g000021 Rmu_sc0000945.1_g000025 Rmu_sc0001512.1_g000009 Rmu_sc0003482.1_g000004 Rmu_sc0004039.1_g000001 Rmu_sc0004390.1_g000008 Rmu_sc0004711.1_g000022 Rmu_sc0005887.1_g000001 Rmu_sc0007795.1_g000002 Rmu_sc0008148.1_g000034 Rmu_sc0008927.1_g000001 Rmu_sc0009714.1_g000007 Rmu_sc0009806.1_g000002 Rmu_sc0012995.1_g000005 Rmu_sc0014278.1_g000005 Rmu_sc0023501.1_g000002
rosa_roxburghii Rroxscaffold_2G00105280 Rroxscaffold_2G00111200 Rroxscaffold_2G00117910 Rroxscaffold_3G00235020 Rroxscaffold_5G00350240 Rroxscaffold_5G00381630 Rroxscaffold_6G00403970 Rroxscaffold_7G00158580
rosa_rugosa Rorug01G0012500 Rorug02G0357800 Rorug02G0359000 Rorug02G0359100 Rorug02G0359200 Rorug04G0061200 Rorug04G0162600 Rorug05G0271800 Rorug06G0213500 Rorug06G0213600 Rorug06G0332900 Rorug07G0148200
rosa_samantha Rh1AG259900 Rh1AG410300 Rh2AG397400 Rh2AG397500 Rh2AG409000 Rh2BG187200 Rh2BG417700 Rh2BG419500 Rh2BG460700 Rh2CG384200 Rh2CG384300 Rh2CG395100 Rh2DG065900 Rh2DG428800 Rh3CG301800 Rh3DG242800 Rh4BG141800 Rh4CG022100 Rh5BG548900 Rh5CG571800 Rh6AG328800 Rh6CG021500 Rh6CG066400 Rh6CG237200 Rh6DG021700 Rh6DG063300 Rh7AG131700 Rh7BG051800 Rh7CG385100 Rh7DG025500 Rh7DG025600
rosa_wichuraiana Rw0G007310 Rw0G016860 Rw2G029630 Rw2G033470 Rw2G034500 Rw3G014930 Rw3G019520 Rw4G010080 Rw4G016450 Rw5G023350 Rw5G041160 Rw5G048810 Rw6G006750 Rw6G017100 Rw7G031010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 294
Acc36I ACCTGC 1 cut(s) 1456
AccB1I GGYRCC 2 cut(s) 117, 1263
AccB7I CCANNNNNTGG 1 cut(s) 870
AccII CGCG 2 cut(s) 30, 170
AciI CCGC 1 cut(s) 272
AclWI GGATC 1 cut(s) 1193
AcoI YGGCCR 1 cut(s) 974
AcsI RAATTY 6 cut(s) 372, 508, 1074, 1113, 1282, 1312
AcuI CTGAAG 2 cut(s) 1188, 1256
AcyI GRCGYC 4 cut(s) 118, 291, 581, 1264
AfaI GTAC 1 cut(s) 1141
AfiI CCNNNNNNNGG 7 cut(s) 108, 348, 492, 870, 1184, 1273, 1570
AflIII ACRYGT 1 cut(s) 76
AgsI TTSAA 3 cut(s) 328, 440, 1464
AhdI GACNNNNNGTC 1 cut(s) 10
AjiI CACGTC 2 cut(s) 79, 1533
AjnI CCWGG 3 cut(s) 18, 863, 1004
AjuI GAANNNNNNNTTGG 2 cut(s) 1173, 1205
AloI GAACNNNNNNTCC 2 cut(s) 1389, 1421
Alw21I GWGCWC 1 cut(s) 48
Alw26I GTCTC 3 cut(s) 560, 646, 995
AlwI GGATC 1 cut(s) 1193
AlwNI CAGNNNCTG 1 cut(s) 1387
Ama87I CYCGRG 2 cut(s) 92, 570
AoxI GGCC 5 cut(s) 244, 722, 857, 974, 1457
ApeKI GCWGC 6 cut(s) 127, 172, 175, 310, 550, 731
ApoI RAATTY 6 cut(s) 372, 508, 1074, 1113, 1282, 1312
ArsI GACNNNNNNTTYG 2 cut(s) 1304, 1336
AspLEI GCGC 4 cut(s) 30, 120, 172, 1266
AspS9I GGNCC 5 cut(s) 12, 88, 268, 723, 1573
AsuC2I CCSGG 2 cut(s) 10, 191
AsuHPI GGTGA 6 cut(s) 299, 433, 576, 586, 1208, 1505
AsuII TTCGAA 1 cut(s) 506
AsuNHI GCTAGC 1 cut(s) 1451
AvaI CYCGRG 2 cut(s) 92, 570
AvaII GGWCC 4 cut(s) 12, 88, 268, 1573
BaeGI GKGCMC 2 cut(s) 191, 1330
BalI TGGCCA 1 cut(s) 976
BanI GGYRCC 2 cut(s) 117, 1263
BanII GRGCYC 1 cut(s) 48
BauI CACGAG 1 cut(s) 1341
BbsI GAAGAC 1 cut(s) 447
Bbv12I GWGCWC 1 cut(s) 48
BbvI GCAGC 6 cut(s) 114, 159, 162, 297, 537, 718
BccI CCATC 5 cut(s) 193, 682, 811, 1064, 1341
BceAI ACGGC 5 cut(s) 105, 131, 594, 744, 1065
BcgI CGANNNNNNTGC 2 cut(s) 289, 323
BciT130I CCWGG 3 cut(s) 20, 865, 1006
BclI TGATCA 2 cut(s) 520, 543
BcnI CCSGG 2 cut(s) 10, 191
BcoDI GTCTC 3 cut(s) 560, 646, 995
BfaI CTAG 3 cut(s) 1089, 1104, 1452
BfmI CTRYAG 1 cut(s) 489
BfoI RGCGCY 2 cut(s) 121, 1267
BfuAI ACCTGC 1 cut(s) 1456
BisI GCNGC 6 cut(s) 128, 173, 176, 311, 551, 732
BlsI GCNGC 6 cut(s) 129, 174, 177, 312, 552, 733
Bme1390I CCNGG 5 cut(s) 10, 20, 191, 865, 1006
Bme18I GGWCC 4 cut(s) 12, 88, 268, 1573
BmeRI GACNNNNNGTC 1 cut(s) 10
BmeT110I CYCGRG 2 cut(s) 92, 570
BmgBI CACGTC 2 cut(s) 79, 1533
BmgT120I GGNCC 5 cut(s) 12, 88, 268, 723, 1573
BmiI GGNNCC 5 cut(s) 13, 14, 119, 270, 1265
BmrFI CCNGG 5 cut(s) 10, 20, 191, 865, 1006
BmsI GCATC 2 cut(s) 1422, 1473
BmtI GCTAGC 1 cut(s) 1455
BpiI GAAGAC 1 cut(s) 447
BpmI CTGGAG 1 cut(s) 1409
Bpu14I TTCGAA 1 cut(s) 506
BpuMI CCSGG 2 cut(s) 10, 191
BsaHI GRCGYC 4 cut(s) 118, 291, 581, 1264
BsaI GGTCTC 1 cut(s) 995
BsaJI CCNNGG 4 cut(s) 19, 91, 726, 864
BsaWI WCCGGW 4 cut(s) 180, 589, 1519, 1575
BsaXI ACNNNNNCTCC 6 cut(s) 1018, 1033, 1048, 1063, 1389, 1419
Bsc4I CCNNNNNNNGG 7 cut(s) 108, 348, 492, 870, 1184, 1273, 1570
Bse118I RCCGGY 2 cut(s) 274, 1455
Bse1I ACTGG 2 cut(s) 974, 1495
BseBI CCWGG 3 cut(s) 20, 865, 1006
BseDI CCNNGG 4 cut(s) 19, 91, 726, 864
BseGI GGATG 6 cut(s) 238, 400, 654, 816, 1075, 1488
BseLI CCNNNNNNNGG 7 cut(s) 108, 348, 492, 870, 1184, 1273, 1570
BseMII CTCAG 2 cut(s) 990, 1553
BseNI ACTGG 2 cut(s) 974, 1495
BseRI GAGGAG 6 cut(s) 91, 446, 608, 836, 868, 896
BseSI GKGCMC 2 cut(s) 191, 1330
BseXI GCAGC 6 cut(s) 114, 159, 162, 297, 537, 718
BsgI GTGCAG 1 cut(s) 161
Bsh1236I CGCG 2 cut(s) 30, 170
Bsh1285I CGRYCG 1 cut(s) 109
BshFI GGCC 5 cut(s) 246, 724, 859, 976, 1459
BshNI GGYRCC 2 cut(s) 117, 1263
BsiEI CGRYCG 1 cut(s) 109
BsiHKAI GWGCWC 1 cut(s) 48
BsiHKCI CYCGRG 2 cut(s) 92, 570
BslFI GGGAC 1 cut(s) 1546
BslI CCNNNNNNNGG 7 cut(s) 108, 348, 492, 870, 1184, 1273, 1570
BsmAI GTCTC 3 cut(s) 560, 646, 995
BsmFI GGGAC 1 cut(s) 1546
BsnI GGCC 5 cut(s) 246, 724, 859, 976, 1459
Bso31I GGTCTC 1 cut(s) 995
BsoBI CYCGRG 2 cut(s) 92, 570
Bsp119I TTCGAA 1 cut(s) 506
Bsp1286I GDGCHC 3 cut(s) 48, 191, 1330
Bsp143I GATC 5 cut(s) 106, 520, 543, 1198, 1360
BspACI CCGC 1 cut(s) 272
BspANI GGCC 5 cut(s) 246, 724, 859, 976, 1459
BspCNI CTCAG 2 cut(s) 991, 1552
BspFNI CGCG 2 cut(s) 30, 170
BspHI TCATGA 1 cut(s) 144
BspLI GGNNCC 5 cut(s) 13, 14, 119, 270, 1265
BspMAI CTGCAG 1 cut(s) 493
BspMI ACCTGC 1 cut(s) 1456
BspOI GCTAGC 1 cut(s) 1455
BspPI GGATC 1 cut(s) 1193
BspQI GCTCTTC 1 cut(s) 53
BspT104I TTCGAA 1 cut(s) 506
BspT107I GGYRCC 2 cut(s) 117, 1263
BspTNI GGTCTC 1 cut(s) 995
BsrFI RCCGGY 2 cut(s) 274, 1455
BsrI ACTGG 2 cut(s) 974, 1495
BssAI RCCGGY 2 cut(s) 274, 1455
BssECI CCNNGG 4 cut(s) 19, 91, 726, 864
BssMI GATC 5 cut(s) 106, 520, 543, 1198, 1360
BssNI GRCGYC 4 cut(s) 118, 291, 581, 1264
BssSI CACGAG 1 cut(s) 1341
Bst2BI CACGAG 1 cut(s) 1341
Bst2UI CCWGG 3 cut(s) 20, 865, 1006
Bst4CI ACNGT 5 cut(s) 287, 446, 1162, 1420, 1548
Bst6I CTCTTC 7 cut(s) 53, 206, 398, 776, 788, 845, 1013
BstACI GRCGYC 4 cut(s) 118, 291, 581, 1264
BstBI TTCGAA 1 cut(s) 506
BstC8I GCNNGC 6 cut(s) 26, 354, 861, 1330, 1453, 1457
BstDEI CTNAG 2 cut(s) 999, 1539
BstDSI CCRYGG 1 cut(s) 726
BstF5I GGATG 6 cut(s) 238, 400, 654, 816, 1075, 1488
BstFNI CGCG 2 cut(s) 30, 170
BstH2I RGCGCY 2 cut(s) 121, 1267
BstHHI GCGC 4 cut(s) 30, 120, 172, 1266
BstKTI GATC 5 cut(s) 109, 523, 546, 1201, 1363
BstMAI GTCTC 3 cut(s) 560, 646, 995
BstMBI GATC 5 cut(s) 106, 520, 543, 1198, 1360
BstMCI CGRYCG 1 cut(s) 109
BstMWI GCNNNNNNNGC 4 cut(s) 124, 169, 358, 559
BstNI CCWGG 3 cut(s) 20, 865, 1006
BstSCI CCNGG 5 cut(s) 8, 18, 189, 863, 1004
BstSFI CTRYAG 1 cut(s) 489
BstSLI GKGCMC 2 cut(s) 191, 1330
BstUI CGCG 2 cut(s) 30, 170
BstV1I GCAGC 6 cut(s) 114, 159, 162, 297, 537, 718
BstV2I GAAGAC 1 cut(s) 447
BsuRI GGCC 5 cut(s) 246, 724, 859, 976, 1459
BtgI CCRYGG 1 cut(s) 726
BtrI CACGTC 2 cut(s) 79, 1533
BtsCI GGATG 6 cut(s) 238, 400, 654, 816, 1075, 1488
BtsI GCAGTG 1 cut(s) 486
BtsIMutI CAGTG 2 cut(s) 486, 1416
BveI ACCTGC 1 cut(s) 1456
Cac8I GCNNGC 6 cut(s) 26, 354, 861, 1330, 1453, 1457
CaiI CAGNNNCTG 1 cut(s) 1387
CciI TCATGA 1 cut(s) 144
CfoI GCGC 4 cut(s) 30, 120, 172, 1266
Cfr10I RCCGGY 2 cut(s) 274, 1455
Cfr13I GGNCC 5 cut(s) 12, 88, 268, 723, 1573
CseI GACGC 2 cut(s) 176, 570
Csp6I GTAC 1 cut(s) 1140
CspCI CAANNNNNGTGG 2 cut(s) 1452, 1487
CviAII CATG 5 cut(s) 61, 145, 260, 547, 1132
CviQI GTAC 1 cut(s) 1140
DdeI CTNAG 2 cut(s) 999, 1539
DinI GGCGCC 2 cut(s) 119, 1265
DpnI GATC 5 cut(s) 108, 522, 545, 1200, 1362
DpnII GATC 5 cut(s) 106, 520, 543, 1198, 1360
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 974
Eam1104I CTCTTC 7 cut(s) 53, 206, 398, 776, 788, 845, 1013
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 7 cut(s) 53, 206, 398, 776, 788, 845, 1013
Ecl136II GAGCTC 1 cut(s) 46
Eco147I AGGCCT 2 cut(s) 246, 859
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 995
Eco47I GGWCC 4 cut(s) 12, 88, 268, 1573
Eco53kI GAGCTC 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 1188, 1256
Eco88I CYCGRG 2 cut(s) 92, 570
EcoICRI GAGCTC 1 cut(s) 46
EcoO109I RGGNCCY 1 cut(s) 12
EcoRI GAATTC 1 cut(s) 1074
EcoRII CCWGG 3 cut(s) 18, 863, 1004
EcoT38I GRGCYC 1 cut(s) 48
EgeI GGCGCC 2 cut(s) 119, 1265
EheI GGCGCC 2 cut(s) 119, 1265
FaeI CATG 5 cut(s) 64, 148, 263, 550, 1135
FalI AAGNNNNNCTT 2 cut(s) 1392, 1424
FaqI GGGAC 1 cut(s) 1546
FatI CATG 5 cut(s) 60, 144, 259, 546, 1131
FauI CCCGC 1 cut(s) 279
FbaI TGATCA 2 cut(s) 520, 543
Fnu4HI GCNGC 6 cut(s) 128, 173, 176, 311, 551, 732
FokI GGATG 6 cut(s) 245, 407, 661, 823, 1082, 1495
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 6 cut(s) 128, 173, 176, 311, 551, 732
FspBI CTAG 3 cut(s) 1089, 1104, 1452
GlaI GCGC 4 cut(s) 29, 119, 171, 1265
GluI GCNGC 6 cut(s) 128, 173, 176, 311, 551, 732
GsuI CTGGAG 1 cut(s) 1409
HaeII RGCGCY 2 cut(s) 121, 1267
HaeIII GGCC 5 cut(s) 246, 724, 859, 976, 1459
HgaI GACGC 2 cut(s) 176, 570
HhaI GCGC 4 cut(s) 30, 120, 172, 1266
Hin1I GRCGYC 4 cut(s) 118, 291, 581, 1264
Hin1II CATG 5 cut(s) 64, 148, 263, 550, 1135
Hin6I GCGC 4 cut(s) 28, 118, 170, 1264
HinP1I GCGC 4 cut(s) 28, 118, 170, 1264
HincII GTYRAC 1 cut(s) 1527
HindII GTYRAC 1 cut(s) 1527
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 4 cut(s) 5, 68, 503, 568
HpaI GTTAAC 1 cut(s) 1527
HphI GGTGA 6 cut(s) 299, 433, 576, 586, 1208, 1505
Hpy166II GTNNAC 3 cut(s) 136, 283, 1527
Hpy188I TCNGA 6 cut(s) 106, 111, 370, 763, 1207, 1297
Hpy188III TCNNGA 5 cut(s) 37, 72, 145, 1303, 1388
Hpy8I GTNNAC 3 cut(s) 136, 283, 1527
Hpy99I CGWCG 1 cut(s) 986
HpyAV CCTTC 8 cut(s) 266, 421, 670, 871, 913, 1212, 1254, 1470
HpyCH4III ACNGT 5 cut(s) 287, 446, 1162, 1420, 1548
HpyCH4IV ACGT 3 cut(s) 78, 291, 1532
HpyCH4V TGCA 5 cut(s) 163, 178, 491, 1413, 1438
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 169, 358, 559
HpyF3I CTNAG 2 cut(s) 999, 1539
HpySE526I ACGT 3 cut(s) 78, 291, 1532
Hsp92I GRCGYC 4 cut(s) 118, 291, 581, 1264
Hsp92II CATG 5 cut(s) 64, 148, 263, 550, 1135
HspAI GCGC 4 cut(s) 28, 118, 170, 1264
KasI GGCGCC 2 cut(s) 117, 1263
KflI GGGWCCC 1 cut(s) 12
KroI GCCGGC 1 cut(s) 1455
KroNI GCCGGC 1 cut(s) 1457
Ksp22I TGATCA 2 cut(s) 520, 543
KspAI GTTAAC 1 cut(s) 1527
Kzo9I GATC 5 cut(s) 106, 520, 543, 1198, 1360
LguI GCTCTTC 1 cut(s) 53
LmnI GCTCC 6 cut(s) 193, 321, 433, 895, 1026, 1390
Lsp1109I GCAGC 6 cut(s) 114, 159, 162, 297, 537, 718
LweI GCATC 2 cut(s) 1422, 1473
MaeI CTAG 3 cut(s) 1089, 1104, 1452
MaeII ACGT 3 cut(s) 78, 291, 1532
MaeIII GTNAC 6 cut(s) 287, 574, 582, 965, 1276, 1542
MalI GATC 5 cut(s) 108, 522, 545, 1200, 1362
MboI GATC 5 cut(s) 106, 520, 543, 1198, 1360
MhlI GDGCHC 3 cut(s) 48, 191, 1330
MlsI TGGCCA 1 cut(s) 976
MluNI TGGCCA 1 cut(s) 976
Mly113I GGCGCC 2 cut(s) 118, 1264
MlyI GAGTC 2 cut(s) 62, 562
MmeI TCCRAC 3 cut(s) 348, 741, 1047
Mox20I TGGCCA 1 cut(s) 976
MroNI GCCGGC 1 cut(s) 1455
MscI TGGCCA 1 cut(s) 976
MseI TTAA 1 cut(s) 1526
MslI CAYNNNNRTG 2 cut(s) 984, 1418
Msp20I TGGCCA 1 cut(s) 976
MspR9I CCNGG 5 cut(s) 10, 20, 191, 865, 1006
MvaI CCWGG 3 cut(s) 20, 865, 1006
MvnI CGCG 2 cut(s) 30, 170
MwoI GCNNNNNNNGC 4 cut(s) 124, 169, 358, 559
NaeI GCCGGC 1 cut(s) 1457
NarI GGCGCC 2 cut(s) 118, 1264
NciI CCSGG 2 cut(s) 10, 191
NdeII GATC 5 cut(s) 106, 520, 543, 1198, 1360
NgoMIV GCCGGC 1 cut(s) 1455
NheI GCTAGC 1 cut(s) 1451
NlaIII CATG 5 cut(s) 64, 148, 263, 550, 1135
NlaIV GGNNCC 5 cut(s) 13, 14, 119, 270, 1265
NmeAIII GCCGAG 2 cut(s) 324, 651
NmuCI GTSAC 5 cut(s) 287, 574, 582, 965, 1542
NspV TTCGAA 1 cut(s) 506
PagI TCATGA 1 cut(s) 144
PceI AGGCCT 2 cut(s) 246, 859
PciSI GCTCTTC 1 cut(s) 53
PcsI WCGNNNNNNNCGW 1 cut(s) 734
PdiI GCCGGC 1 cut(s) 1457
PfeI GAWTC 1 cut(s) 503
PflFI GACNNNGTC 1 cut(s) 580
PflMI CCANNNNNTGG 1 cut(s) 870
PkrI GCNGC 6 cut(s) 129, 174, 177, 312, 552, 733
Ple19I CGATCG 1 cut(s) 109
PleI GAGTC 2 cut(s) 62, 562
PluTI GGCGCC 2 cut(s) 121, 1267
PpsI GAGTC 2 cut(s) 62, 562
PpuMI RGGWCCY 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 48
Psp5II RGGWCCY 1 cut(s) 12
Psp6I CCWGG 3 cut(s) 18, 863, 1004
PspGI CCWGG 3 cut(s) 18, 863, 1004
PspN4I GGNNCC 5 cut(s) 13, 14, 119, 270, 1265
PspPI GGNCC 5 cut(s) 12, 88, 268, 723, 1573
PspPPI RGGWCCY 1 cut(s) 12
PstI CTGCAG 1 cut(s) 493
PstNI CAGNNNCTG 1 cut(s) 1387
PsyI GACNNNGTC 1 cut(s) 580
PvuI CGATCG 1 cut(s) 109
RsaI GTAC 1 cut(s) 1141
RsaNI GTAC 1 cut(s) 1140
RseI CAYNNNNRTG 2 cut(s) 984, 1418
SacI GAGCTC 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 1 cut(s) 1526
SatI GCNGC 6 cut(s) 128, 173, 176, 311, 551, 732
Sau3AI GATC 5 cut(s) 106, 520, 543, 1198, 1360
Sau96I GGNCC 5 cut(s) 12, 88, 268, 723, 1573
SchI GAGTC 2 cut(s) 62, 562
ScrFI CCNGG 5 cut(s) 10, 20, 191, 865, 1006
SduI GDGCHC 3 cut(s) 48, 191, 1330
SfaNI GCATC 2 cut(s) 1422, 1473
SfcI CTRYAG 1 cut(s) 489
SfoI GGCGCC 2 cut(s) 119, 1265
SfuI TTCGAA 1 cut(s) 506
SinI GGWCC 4 cut(s) 12, 88, 268, 1573
SmiMI CAYNNNNRTG 2 cut(s) 984, 1418
SseBI AGGCCT 2 cut(s) 246, 859
SsiI CCGC 1 cut(s) 272
SspDI GGCGCC 2 cut(s) 117, 1263
SspMI CTAG 3 cut(s) 1089, 1104, 1452
SstI GAGCTC 1 cut(s) 48
StuI AGGCCT 2 cut(s) 246, 859
StyD4I CCNGG 5 cut(s) 8, 18, 189, 863, 1004
TaaI ACNGT 5 cut(s) 287, 446, 1162, 1420, 1548
TaiI ACGT 3 cut(s) 81, 294, 1535
TaqI TCGA 6 cut(s) 66, 221, 506, 737, 815, 839
TaqII GACCGA 1 cut(s) 76
TfiI GAWTC 1 cut(s) 503
Tru1I TTAA 1 cut(s) 1526
Tru9I TTAA 1 cut(s) 1526
TscAI CASTG 2 cut(s) 493, 1423
TseFI GTSAC 5 cut(s) 287, 574, 582, 965, 1542
TseI GCWGC 6 cut(s) 127, 172, 175, 310, 550, 731
Tsp45I GTSAC 5 cut(s) 287, 574, 582, 965, 1542
TspDTI ATGAA 4 cut(s) 133, 248, 1002, 1481
TspRI CASTG 2 cut(s) 493, 1423
Tth111I GACNNNGTC 1 cut(s) 580
Van91I CCANNNNNTGG 1 cut(s) 870
VpaK11BI GGWCC 4 cut(s) 12, 88, 268, 1573
XapI RAATTY 6 cut(s) 372, 508, 1074, 1113, 1282, 1312
XcmI CCANNNNNNNNNTGG 1 cut(s) 1384
XspI CTAG 3 cut(s) 1089, 1104, 1452
ZraI GACGTC 1 cut(s) 292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.