pycom17g00680

ACT domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
463520 .. 466283
2764 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g00680.3

Sequence Viewer

Length: 1332 bp
ATGGATGATGAGTATGCCAAGTTCGTCAGGAGGATGAACCCACCCAGAGTTGTGATTGATAACGATTCTTGCGAGGATGCCACCGTTATACAGGTTGGCAGTGTCAACAAACATGGAATTCTTCTGGATGTTGTCCAAGTGCTCACCGACGTTAACCTTACAATAACAAAAGCATATATCTCATCTGATGGTGTATGGTTCATGGATGTGTTTAATGTGATTGACCGTGACGGGAAGAAGATCAGAGACAAGGACATTATCAATTGTATCCAAATGAGACTTGAAAGCAATGCCGGCTTTGTACCTTCTATGAGACATTCCGTTGGTGTGATGCCCTCAGAAGAGCACACCTCCATTGAGCTGAGTGGTACTGACAGGCCTGGTTTATTGTCTGAAGTGTGTGCAGTTCTTGCAGACCTTCACTGTAATGTGGTAAATGCTGAGATATGGACACACAACACTAGAGCTGCAGCTGTAGTTCATGTCACAGATGATTCCACTGGCTGTGCAATTGAAGATCCAATCCGTCTCGCTACAATCAAGGATTTGCTTTGCAATGTCCTCAAAGGAAACAACGGGTTGAAGCCTGCTAAAATGACACTTGCAACCCCTGGAGTTACAAATAGAGATAGAAGGTTGCATCAGATTATGTTTGCTGACAGGGATTATGAAAGGGTTGAAAGAGCAGAACTACGGAGAGTTGAGGATAAGGGCTCAAAACCCCATGTAACCGCGTTGGATTGCAGCCAGAAGGATTACACAGTCATTACGATGAGGTCAAAAGATCGACCAAAACTGTTATTTGACATCATCTGCACCTTAACGGATATGCAGTATGTTGTTTTTCACGGCATGGTCAATACAGGGAGGATGGAAGCTTATCAGGAATTTTACATTCGACATGTTGATGGGCTTCCTATAAACTCAGAAGCTGAGCGAGAGCGTGTTGTACAGTGTCTTGAAGCAGCCATTGAAAGGAGGGCATCTGAGGGCCTGGAACTACAACTGTGCACAGATGACCGGGTTGGACTTCTCTCGGATATCACCCGGATATTCAGGGAGAACAGTTTGTGTATCAAACGAGCAGAAATTTCAACTAAAAATGGAAAAGCGATGGACACATTCTATGTCACCGACGTTACAGGAAACCCAGTAGACCCCAAGATTATCGATTCAATCCGCAGACAGATTGGCCAGACCATACTGCAGGTGAAATGTAACCCAAGCCCTGCACCAAAGCCTCCTCAAGGGACAAAGATGGGATATCTCTTCGGGAACTTATTTAAAGCTCCAACTTTCCAGAGTTTTAAGTTGGTTAGATCCTACTCTTAA

Protein Analysis

444

Amino Acids

49.78

Weight (kDa)

6.39

Isoelectric Point (pI)

36.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1198
Acc36I ACCTGC 1 cut(s) 1198
AccI GTMKAC 1 cut(s) 1155
AccII CGCG 1 cut(s) 734
AciI CCGC 2 cut(s) 732, 1180
AclWI GGATC 2 cut(s) 512, 1314
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 3 cut(s) 117, 887, 1089
AcuI CTGAAG 1 cut(s) 414
AfaI GTAC 3 cut(s) 303, 370, 951
AfiI CCNNNNNNNGG 2 cut(s) 975, 1247
AflIII ACRYGT 1 cut(s) 901
AgsI TTSAA 8 cut(s) 284, 515, 583, 680, 962, 974, 1095, 1176
AjnI CCWGG 3 cut(s) 379, 610, 993
AluBI AGCT 6 cut(s) 361, 467, 473, 878, 932, 1289
AluI AGCT 6 cut(s) 361, 467, 473, 878, 932, 1289
Alw21I GWGCWC 3 cut(s) 144, 348, 1013
Alw26I GTCTC 4 cut(s) 240, 271, 307, 533
Alw44I GTGCAC 1 cut(s) 1009
AlwI GGATC 2 cut(s) 512, 1314
AlwNI CAGNNNCTG 1 cut(s) 932
AoxI GGCC 3 cut(s) 377, 991, 1192
ApaLI GTGCAC 1 cut(s) 1009
ApeKI GCWGC 4 cut(s) 467, 470, 744, 965
ApoI RAATTY 3 cut(s) 117, 887, 1089
AspS9I GGNCC 1 cut(s) 991
AsuC2I CCSGG 2 cut(s) 1022, 1048
AsuHPI GGTGA 4 cut(s) 136, 1036, 1123, 1222
BaeGI GKGCMC 1 cut(s) 1013
BalI TGGCCA 1 cut(s) 1194
BanII GRGCYC 1 cut(s) 716
Bbv12I GWGCWC 3 cut(s) 144, 348, 1013
BbvI GCAGC 4 cut(s) 454, 482, 756, 977
BccI CCATC 5 cut(s) 182, 865, 902, 1108, 1252
BceAI ACGGC 1 cut(s) 865
BciT130I CCWGG 3 cut(s) 381, 612, 995
BciVI GTATCC 1 cut(s) 278
BcnI CCSGG 2 cut(s) 1022, 1048
BcoDI GTCTC 4 cut(s) 240, 271, 307, 533
BfaI CTAG 1 cut(s) 462
BfmI CTRYAG 3 cut(s) 468, 474, 1205
BfuAI ACCTGC 1 cut(s) 1198
BfuI GTATCC 1 cut(s) 278
BisI GCNGC 4 cut(s) 468, 471, 745, 966
BlpI GCTNAGC 1 cut(s) 933
BlsI GCNGC 4 cut(s) 469, 472, 746, 967
Bme1390I CCNGG 5 cut(s) 381, 612, 995, 1022, 1048
BmgT120I GGNCC 1 cut(s) 991
BmrFI CCNGG 5 cut(s) 381, 612, 995, 1022, 1048
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 4 cut(s) 67, 321, 649, 992
BmuI ACTGGG 1 cut(s) 1145
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 1 cut(s) 633
Bpu1102I GCTNAGC 1 cut(s) 933
BpuEI CTTGAG 1 cut(s) 1230
BpuMI CCSGG 2 cut(s) 1022, 1048
Bsa29I ATCGAT 1 cut(s) 1170
BsaJI CCNNGG 1 cut(s) 610
Bsc4I CCNNNNNNNGG 2 cut(s) 975, 1247
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 2 cut(s) 505, 1151
Bse3DI GCAATG 2 cut(s) 295, 562
BseBI CCWGG 3 cut(s) 381, 612, 995
BseCI ATCGAT 1 cut(s) 1170
BseDI CCNNGG 1 cut(s) 610
BseGI GGATG 6 cut(s) 10, 39, 82, 133, 211, 876
BseLI CCNNNNNNNGG 2 cut(s) 975, 1247
BseMI GCAATG 2 cut(s) 295, 562
BseMII CTCAG 6 cut(s) 351, 353, 432, 924, 939, 978
BseNI ACTGG 2 cut(s) 505, 1151
BseRI GAGGAG 1 cut(s) 1233
BseSI GKGCMC 1 cut(s) 1013
BseXI GCAGC 4 cut(s) 454, 482, 756, 977
BsgI GTGCAG 3 cut(s) 423, 799, 1215
Bsh1236I CGCG 1 cut(s) 734
BshFI GGCC 3 cut(s) 379, 993, 1194
BshVI ATCGAT 1 cut(s) 1170
BsiHKAI GWGCWC 3 cut(s) 144, 348, 1013
BsiSI CCGG 3 cut(s) 294, 1021, 1048
BslFI GGGAC 1 cut(s) 1264
BslI CCNNNNNNNGG 2 cut(s) 975, 1247
BsmAI GTCTC 4 cut(s) 240, 271, 307, 533
BsmBI CGTCTC 1 cut(s) 533
BsmFI GGGAC 1 cut(s) 1264
BsnI GGCC 3 cut(s) 379, 993, 1194
Bsp1286I GDGCHC 4 cut(s) 144, 348, 716, 1013
Bsp1407I TGTACA 1 cut(s) 949
Bsp143I GATC 4 cut(s) 240, 517, 784, 1319
Bsp1720I GCTNAGC 1 cut(s) 933
BspACI CCGC 2 cut(s) 732, 1180
BspANI GGCC 3 cut(s) 379, 993, 1194
BspCNI CTCAG 6 cut(s) 350, 354, 433, 925, 938, 979
BspDI ATCGAT 1 cut(s) 1170
BspFNI CGCG 1 cut(s) 734
BspMAI CTGCAG 2 cut(s) 472, 1209
BspMI ACCTGC 1 cut(s) 1198
BspPI GGATC 2 cut(s) 512, 1314
BspQI GCTCTTC 1 cut(s) 336
BsrDI GCAATG 2 cut(s) 295, 562
BsrFI RCCGGY 1 cut(s) 293
BsrGI TGTACA 1 cut(s) 949
BsrI ACTGG 2 cut(s) 505, 1151
BssAI RCCGGY 1 cut(s) 293
BssECI CCNNGG 1 cut(s) 610
BssMI GATC 4 cut(s) 240, 517, 784, 1319
Bst2UI CCWGG 3 cut(s) 381, 612, 995
Bst4CI ACNGT 8 cut(s) 85, 227, 425, 763, 798, 954, 1008, 1067
Bst6I CTCTTC 2 cut(s) 336, 1274
BstAPI GCANNNNNTGC 1 cut(s) 410
BstAUI TGTACA 1 cut(s) 949
BstC8I GCNNGC 2 cut(s) 295, 588
BstDEI CTNAG 6 cut(s) 337, 362, 441, 925, 933, 987
BstENI CCTNNNNNAGG 1 cut(s) 1245
BstF5I GGATG 6 cut(s) 10, 39, 82, 133, 211, 876
BstFNI CGCG 1 cut(s) 734
BstKTI GATC 4 cut(s) 243, 520, 787, 1322
BstMAI GTCTC 4 cut(s) 240, 271, 307, 533
BstMBI GATC 4 cut(s) 240, 517, 784, 1319
BstMWI GCNNNNNNNGC 2 cut(s) 294, 410
BstNI CCWGG 3 cut(s) 381, 612, 995
BstNSI RCATGY 1 cut(s) 905
BstSCI CCNGG 5 cut(s) 379, 610, 993, 1020, 1046
BstSFI CTRYAG 3 cut(s) 468, 474, 1205
BstSLI GKGCMC 1 cut(s) 1013
BstUI CGCG 1 cut(s) 734
BstV1I GCAGC 4 cut(s) 454, 482, 756, 977
BstX2I RGATCY 2 cut(s) 517, 1319
BstYI RGATCY 2 cut(s) 517, 1319
Bsu15I ATCGAT 1 cut(s) 1170
BsuI GTATCC 1 cut(s) 278
BsuRI GGCC 3 cut(s) 379, 993, 1194
BsuTUI ATCGAT 1 cut(s) 1170
BtgZI GCGATG 1 cut(s) 1127
BtsCI GGATG 6 cut(s) 10, 39, 82, 133, 211, 876
BtsI GCAGTG 1 cut(s) 106
BtsIMutI CAGTG 4 cut(s) 106, 421, 498, 959
BveI ACCTGC 1 cut(s) 1198
Cac8I GCNNGC 2 cut(s) 295, 588
CaiI CAGNNNCTG 1 cut(s) 932
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 1 cut(s) 991
ClaI ATCGAT 1 cut(s) 1170
Csp6I GTAC 3 cut(s) 302, 369, 950
CviAII CATG 6 cut(s) 113, 202, 482, 725, 853, 902
CviQI GTAC 3 cut(s) 302, 369, 950
DdeI CTNAG 6 cut(s) 337, 362, 441, 925, 933, 987
DpnI GATC 4 cut(s) 242, 519, 786, 1321
DpnII GATC 4 cut(s) 240, 517, 784, 1319
DraI TTTAAA 1 cut(s) 1285
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 2 cut(s) 336, 1274
EarI CTCTTC 2 cut(s) 336, 1274
Eco147I AGGCCT 1 cut(s) 379
Eco24I GRGCYC 1 cut(s) 716
Eco32I GATATC 2 cut(s) 1042, 1265
Eco57I CTGAAG 1 cut(s) 414
EcoNI CCTNNNNNAGG 1 cut(s) 1245
EcoO109I RGGNCCY 1 cut(s) 991
EcoRI GAATTC 1 cut(s) 117
EcoRII CCWGG 3 cut(s) 379, 610, 993
EcoRV GATATC 2 cut(s) 1042, 1265
EcoT38I GRGCYC 1 cut(s) 716
Esp3I CGTCTC 1 cut(s) 533
FaeI CATG 6 cut(s) 116, 205, 485, 728, 856, 905
FaqI GGGAC 1 cut(s) 1264
FatI CATG 6 cut(s) 112, 201, 481, 724, 852, 901
FblI GTMKAC 1 cut(s) 1155
Fnu4HI GCNGC 4 cut(s) 468, 471, 745, 966
FokI GGATG 6 cut(s) 17, 46, 89, 140, 218, 883
FriOI GRGCYC 1 cut(s) 716
Fsp4HI GCNGC 4 cut(s) 468, 471, 745, 966
FspBI CTAG 1 cut(s) 462
GluI GCNGC 4 cut(s) 468, 471, 745, 966
GsuI CTGGAG 1 cut(s) 633
HaeIII GGCC 3 cut(s) 379, 993, 1194
HapII CCGG 3 cut(s) 294, 1021, 1048
Hin1II CATG 6 cut(s) 116, 205, 485, 728, 856, 905
HincII GTYRAC 2 cut(s) 106, 154
HindII GTYRAC 2 cut(s) 106, 154
HindIII AAGCTT 1 cut(s) 876
HinfI GANTC 3 cut(s) 65, 494, 1172
HpaI GTTAAC 1 cut(s) 154
HpaII CCGG 3 cut(s) 294, 1021, 1048
HphI GGTGA 4 cut(s) 136, 1036, 1123, 1222
Hpy166II GTNNAC 4 cut(s) 106, 154, 1011, 1156
Hpy188I TCNGA 8 cut(s) 187, 245, 340, 394, 645, 928, 988, 1039
Hpy188III TCNNGA 6 cut(s) 28, 125, 884, 959, 1273, 1300
Hpy8I GTNNAC 4 cut(s) 106, 154, 1011, 1156
Hpy99I CGWCG 2 cut(s) 152, 1139
HpyAV CCTTC 4 cut(s) 315, 428, 627, 745
HpyCH4III ACNGT 8 cut(s) 85, 227, 425, 763, 798, 954, 1008, 1067
HpyCH4IV ACGT 2 cut(s) 150, 1137
HpyF10VI GCNNNNNNNGC 2 cut(s) 294, 410
HpyF3I CTNAG 6 cut(s) 337, 362, 441, 925, 933, 987
HpySE526I ACGT 2 cut(s) 150, 1137
Hsp92II CATG 6 cut(s) 116, 205, 485, 728, 856, 905
KroI GCCGGC 1 cut(s) 293
KroNI GCCGGC 1 cut(s) 295
KspAI GTTAAC 1 cut(s) 154
Kzo9I GATC 4 cut(s) 240, 517, 784, 1319
LguI GCTCTTC 1 cut(s) 336
LmnI GCTCC 1 cut(s) 1294
Lsp1109I GCAGC 4 cut(s) 454, 482, 756, 977
LweI GCATC 4 cut(s) 67, 321, 649, 992
MaeI CTAG 1 cut(s) 462
MaeII ACGT 2 cut(s) 150, 1137
MaeIII GTNAC 7 cut(s) 227, 484, 616, 727, 1129, 1138, 1217
MalI GATC 4 cut(s) 242, 519, 786, 1321
MboI GATC 4 cut(s) 240, 517, 784, 1319
MboII GAAGA 6 cut(s) 113, 247, 250, 353, 527, 1261
MfeI CAATTG 2 cut(s) 262, 510
MflI RGATCY 2 cut(s) 517, 1319
MhlI GDGCHC 4 cut(s) 144, 348, 716, 1013
MlsI TGGCCA 1 cut(s) 1194
MluCI AATT 5 cut(s) 117, 262, 510, 887, 1089
MluNI TGGCCA 1 cut(s) 1194
MmeI TCCRAC 3 cut(s) 717, 1006, 1316
Mox20I TGGCCA 1 cut(s) 1194
MroNI GCCGGC 1 cut(s) 293
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 6 cut(s) 153, 213, 821, 1284, 1308, 1330
MslI CAYNNNNRTG 4 cut(s) 206, 426, 770, 906
Msp20I TGGCCA 1 cut(s) 1194
MspA1I CMGCKG 1 cut(s) 473
MspI CCGG 3 cut(s) 294, 1021, 1048
MspR9I CCNGG 5 cut(s) 381, 612, 995, 1022, 1048
MunI CAATTG 2 cut(s) 262, 510
MvaI CCWGG 3 cut(s) 381, 612, 995
MvnI CGCG 1 cut(s) 734
MwoI GCNNNNNNNGC 2 cut(s) 294, 410
NaeI GCCGGC 1 cut(s) 295
NciI CCSGG 2 cut(s) 1022, 1048
NdeII GATC 4 cut(s) 240, 517, 784, 1319
NgoMIV GCCGGC 1 cut(s) 293
NlaIII CATG 6 cut(s) 116, 205, 485, 728, 856, 905
NmuCI GTSAC 3 cut(s) 227, 484, 1129
NspI RCATGY 1 cut(s) 905
PaqCI CACCTGC 1 cut(s) 1198
PceI AGGCCT 1 cut(s) 379
PciI ACATGT 1 cut(s) 901
PciSI GCTCTTC 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PdiI GCCGGC 1 cut(s) 295
PfeI GAWTC 3 cut(s) 65, 494, 1172
PkrI GCNGC 4 cut(s) 469, 472, 746, 967
PscI ACATGT 1 cut(s) 901
Psp6I CCWGG 3 cut(s) 379, 610, 993
PspGI CCWGG 3 cut(s) 379, 610, 993
PspPI GGNCC 1 cut(s) 991
PsrI GAACNNNNNNTAC 1 cut(s) 37
PstI CTGCAG 2 cut(s) 472, 1209
PstNI CAGNNNCTG 1 cut(s) 932
PsuI RGATCY 2 cut(s) 517, 1319
PvuII CAGCTG 1 cut(s) 473
RsaI GTAC 3 cut(s) 303, 370, 951
RsaNI GTAC 3 cut(s) 302, 369, 950
RseI CAYNNNNRTG 4 cut(s) 206, 426, 770, 906
SapI GCTCTTC 1 cut(s) 336
SaqAI TTAA 6 cut(s) 153, 213, 821, 1284, 1308, 1330
SatI GCNGC 4 cut(s) 468, 471, 745, 966
Sau3AI GATC 4 cut(s) 240, 517, 784, 1319
Sau96I GGNCC 1 cut(s) 991
ScrFI CCNGG 5 cut(s) 381, 612, 995, 1022, 1048
SduI GDGCHC 4 cut(s) 144, 348, 716, 1013
SfaNI GCATC 4 cut(s) 67, 321, 649, 992
SfcI CTRYAG 3 cut(s) 468, 474, 1205
SmiMI CAYNNNNRTG 4 cut(s) 206, 426, 770, 906
SmlI CTYRAG 1 cut(s) 1245
SmoI CTYRAG 1 cut(s) 1245
Sse9I AATT 5 cut(s) 117, 262, 510, 887, 1089
SseBI AGGCCT 1 cut(s) 379
SsiI CCGC 2 cut(s) 732, 1180
SspMI CTAG 1 cut(s) 462
StuI AGGCCT 1 cut(s) 379
StyD4I CCNGG 5 cut(s) 379, 610, 993, 1020, 1046
TaaI ACNGT 8 cut(s) 85, 227, 425, 763, 798, 954, 1008, 1067
TaiI ACGT 2 cut(s) 153, 1140
TaqI TCGA 3 cut(s) 787, 898, 1170
TasI AATT 5 cut(s) 117, 262, 510, 887, 1089
TatI WGTACW 1 cut(s) 949
TfiI GAWTC 3 cut(s) 65, 494, 1172
Tru1I TTAA 6 cut(s) 153, 213, 821, 1284, 1308, 1330
Tru9I TTAA 6 cut(s) 153, 213, 821, 1284, 1308, 1330
TscAI CASTG 4 cut(s) 106, 428, 505, 959
TseFI GTSAC 3 cut(s) 227, 484, 1129
TseI GCWGC 4 cut(s) 467, 470, 744, 965
Tsp45I GTSAC 3 cut(s) 227, 484, 1129
TspDTI ATGAA 4 cut(s) 50, 190, 470, 684
TspGWI ACGGA 4 cut(s) 310, 515, 709, 839
TspRI CASTG 4 cut(s) 106, 428, 505, 959
VneI GTGCAC 1 cut(s) 1009
XagI CCTNNNNNAGG 1 cut(s) 1245
XapI RAATTY 3 cut(s) 117, 887, 1089
XceI RCATGY 1 cut(s) 905
XmiI GTMKAC 1 cut(s) 1155
XspI CTAG 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.