ACT domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 AT3G01990 |
| fragaria_vesca | FvH4_6g53840 |
| malus_domestica | MD09G1008100.v1.1 MD17G1002600.v1.1 |
| prunus_persica | Prupe.3G308800_v2.0.a1 Prupe.3G308800_v2.0.a1 Prupe.3G308800_v2.0.a1 Prupe.3G308800_v2.0.a1 Prupe.3G308800_v2.0.a1 Prupe.3G308800_v2.0.a1 |
| pyrus_communis | pycom111g00650 pycom17g00680 |
| rosa_chinensis | RchiOBHm_Chr2g0175981 |
| rosa_laevigata | RLG00000022370 |
| rosa_multiflora | Rmu_co8433007.1_g000001 Rmu_sc0012513.1_g000007 Rmu_sc0018801.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00076890 |
| rosa_rugosa | Rorug02G0589100 Rorug02G0589100 |
| rosa_samantha | Rh2AG668300 Rh2BG679800 Rh2CG642700 Rh2DG693500 |
| rosa_wichuraiana | Rw2G054790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1198 |
| Acc36I | ACCTGC | 1 cut(s) | 1198 |
| AccI | GTMKAC | 1 cut(s) | 1155 |
| AccII | CGCG | 1 cut(s) | 734 |
| AciI | CCGC | 2 cut(s) | 732, 1180 |
| AclWI | GGATC | 2 cut(s) | 512, 1314 |
| AcoI | YGGCCR | 1 cut(s) | 1192 |
| AcsI | RAATTY | 3 cut(s) | 117, 887, 1089 |
| AcuI | CTGAAG | 1 cut(s) | 414 |
| AfaI | GTAC | 3 cut(s) | 303, 370, 951 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 975, 1247 |
| AflIII | ACRYGT | 1 cut(s) | 901 |
| AgsI | TTSAA | 8 cut(s) | 284, 515, 583, 680, 962, 974, 1095, 1176 |
| AjnI | CCWGG | 3 cut(s) | 379, 610, 993 |
| AluBI | AGCT | 6 cut(s) | 361, 467, 473, 878, 932, 1289 |
| AluI | AGCT | 6 cut(s) | 361, 467, 473, 878, 932, 1289 |
| Alw21I | GWGCWC | 3 cut(s) | 144, 348, 1013 |
| Alw26I | GTCTC | 4 cut(s) | 240, 271, 307, 533 |
| Alw44I | GTGCAC | 1 cut(s) | 1009 |
| AlwI | GGATC | 2 cut(s) | 512, 1314 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 932 |
| AoxI | GGCC | 3 cut(s) | 377, 991, 1192 |
| ApaLI | GTGCAC | 1 cut(s) | 1009 |
| ApeKI | GCWGC | 4 cut(s) | 467, 470, 744, 965 |
| ApoI | RAATTY | 3 cut(s) | 117, 887, 1089 |
| AspS9I | GGNCC | 1 cut(s) | 991 |
| AsuC2I | CCSGG | 2 cut(s) | 1022, 1048 |
| AsuHPI | GGTGA | 4 cut(s) | 136, 1036, 1123, 1222 |
| BaeGI | GKGCMC | 1 cut(s) | 1013 |
| BalI | TGGCCA | 1 cut(s) | 1194 |
| BanII | GRGCYC | 1 cut(s) | 716 |
| Bbv12I | GWGCWC | 3 cut(s) | 144, 348, 1013 |
| BbvI | GCAGC | 4 cut(s) | 454, 482, 756, 977 |
| BccI | CCATC | 5 cut(s) | 182, 865, 902, 1108, 1252 |
| BceAI | ACGGC | 1 cut(s) | 865 |
| BciT130I | CCWGG | 3 cut(s) | 381, 612, 995 |
| BciVI | GTATCC | 1 cut(s) | 278 |
| BcnI | CCSGG | 2 cut(s) | 1022, 1048 |
| BcoDI | GTCTC | 4 cut(s) | 240, 271, 307, 533 |
| BfaI | CTAG | 1 cut(s) | 462 |
| BfmI | CTRYAG | 3 cut(s) | 468, 474, 1205 |
| BfuAI | ACCTGC | 1 cut(s) | 1198 |
| BfuI | GTATCC | 1 cut(s) | 278 |
| BisI | GCNGC | 4 cut(s) | 468, 471, 745, 966 |
| BlpI | GCTNAGC | 1 cut(s) | 933 |
| BlsI | GCNGC | 4 cut(s) | 469, 472, 746, 967 |
| Bme1390I | CCNGG | 5 cut(s) | 381, 612, 995, 1022, 1048 |
| BmgT120I | GGNCC | 1 cut(s) | 991 |
| BmrFI | CCNGG | 5 cut(s) | 381, 612, 995, 1022, 1048 |
| BmrI | ACTGGG | 1 cut(s) | 1145 |
| BmsI | GCATC | 4 cut(s) | 67, 321, 649, 992 |
| BmuI | ACTGGG | 1 cut(s) | 1145 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 335, 367 |
| BpmI | CTGGAG | 1 cut(s) | 633 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 933 |
| BpuEI | CTTGAG | 1 cut(s) | 1230 |
| BpuMI | CCSGG | 2 cut(s) | 1022, 1048 |
| Bsa29I | ATCGAT | 1 cut(s) | 1170 |
| BsaJI | CCNNGG | 1 cut(s) | 610 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 975, 1247 |
| Bse118I | RCCGGY | 1 cut(s) | 293 |
| Bse1I | ACTGG | 2 cut(s) | 505, 1151 |
| Bse3DI | GCAATG | 2 cut(s) | 295, 562 |
| BseBI | CCWGG | 3 cut(s) | 381, 612, 995 |
| BseCI | ATCGAT | 1 cut(s) | 1170 |
| BseDI | CCNNGG | 1 cut(s) | 610 |
| BseGI | GGATG | 6 cut(s) | 10, 39, 82, 133, 211, 876 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 975, 1247 |
| BseMI | GCAATG | 2 cut(s) | 295, 562 |
| BseMII | CTCAG | 6 cut(s) | 351, 353, 432, 924, 939, 978 |
| BseNI | ACTGG | 2 cut(s) | 505, 1151 |
| BseRI | GAGGAG | 1 cut(s) | 1233 |
| BseSI | GKGCMC | 1 cut(s) | 1013 |
| BseXI | GCAGC | 4 cut(s) | 454, 482, 756, 977 |
| BsgI | GTGCAG | 3 cut(s) | 423, 799, 1215 |
| Bsh1236I | CGCG | 1 cut(s) | 734 |
| BshFI | GGCC | 3 cut(s) | 379, 993, 1194 |
| BshVI | ATCGAT | 1 cut(s) | 1170 |
| BsiHKAI | GWGCWC | 3 cut(s) | 144, 348, 1013 |
| BsiSI | CCGG | 3 cut(s) | 294, 1021, 1048 |
| BslFI | GGGAC | 1 cut(s) | 1264 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 975, 1247 |
| BsmAI | GTCTC | 4 cut(s) | 240, 271, 307, 533 |
| BsmBI | CGTCTC | 1 cut(s) | 533 |
| BsmFI | GGGAC | 1 cut(s) | 1264 |
| BsnI | GGCC | 3 cut(s) | 379, 993, 1194 |
| Bsp1286I | GDGCHC | 4 cut(s) | 144, 348, 716, 1013 |
| Bsp1407I | TGTACA | 1 cut(s) | 949 |
| Bsp143I | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 933 |
| BspACI | CCGC | 2 cut(s) | 732, 1180 |
| BspANI | GGCC | 3 cut(s) | 379, 993, 1194 |
| BspCNI | CTCAG | 6 cut(s) | 350, 354, 433, 925, 938, 979 |
| BspDI | ATCGAT | 1 cut(s) | 1170 |
| BspFNI | CGCG | 1 cut(s) | 734 |
| BspMAI | CTGCAG | 2 cut(s) | 472, 1209 |
| BspMI | ACCTGC | 1 cut(s) | 1198 |
| BspPI | GGATC | 2 cut(s) | 512, 1314 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BsrDI | GCAATG | 2 cut(s) | 295, 562 |
| BsrFI | RCCGGY | 1 cut(s) | 293 |
| BsrGI | TGTACA | 1 cut(s) | 949 |
| BsrI | ACTGG | 2 cut(s) | 505, 1151 |
| BssAI | RCCGGY | 1 cut(s) | 293 |
| BssECI | CCNNGG | 1 cut(s) | 610 |
| BssMI | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| Bst2UI | CCWGG | 3 cut(s) | 381, 612, 995 |
| Bst4CI | ACNGT | 8 cut(s) | 85, 227, 425, 763, 798, 954, 1008, 1067 |
| Bst6I | CTCTTC | 2 cut(s) | 336, 1274 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 410 |
| BstAUI | TGTACA | 1 cut(s) | 949 |
| BstC8I | GCNNGC | 2 cut(s) | 295, 588 |
| BstDEI | CTNAG | 6 cut(s) | 337, 362, 441, 925, 933, 987 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1245 |
| BstF5I | GGATG | 6 cut(s) | 10, 39, 82, 133, 211, 876 |
| BstFNI | CGCG | 1 cut(s) | 734 |
| BstKTI | GATC | 4 cut(s) | 243, 520, 787, 1322 |
| BstMAI | GTCTC | 4 cut(s) | 240, 271, 307, 533 |
| BstMBI | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 294, 410 |
| BstNI | CCWGG | 3 cut(s) | 381, 612, 995 |
| BstNSI | RCATGY | 1 cut(s) | 905 |
| BstSCI | CCNGG | 5 cut(s) | 379, 610, 993, 1020, 1046 |
| BstSFI | CTRYAG | 3 cut(s) | 468, 474, 1205 |
| BstSLI | GKGCMC | 1 cut(s) | 1013 |
| BstUI | CGCG | 1 cut(s) | 734 |
| BstV1I | GCAGC | 4 cut(s) | 454, 482, 756, 977 |
| BstX2I | RGATCY | 2 cut(s) | 517, 1319 |
| BstYI | RGATCY | 2 cut(s) | 517, 1319 |
| Bsu15I | ATCGAT | 1 cut(s) | 1170 |
| BsuI | GTATCC | 1 cut(s) | 278 |
| BsuRI | GGCC | 3 cut(s) | 379, 993, 1194 |
| BsuTUI | ATCGAT | 1 cut(s) | 1170 |
| BtgZI | GCGATG | 1 cut(s) | 1127 |
| BtsCI | GGATG | 6 cut(s) | 10, 39, 82, 133, 211, 876 |
| BtsI | GCAGTG | 1 cut(s) | 106 |
| BtsIMutI | CAGTG | 4 cut(s) | 106, 421, 498, 959 |
| BveI | ACCTGC | 1 cut(s) | 1198 |
| Cac8I | GCNNGC | 2 cut(s) | 295, 588 |
| CaiI | CAGNNNCTG | 1 cut(s) | 932 |
| Cfr10I | RCCGGY | 1 cut(s) | 293 |
| Cfr13I | GGNCC | 1 cut(s) | 991 |
| ClaI | ATCGAT | 1 cut(s) | 1170 |
| Csp6I | GTAC | 3 cut(s) | 302, 369, 950 |
| CviAII | CATG | 6 cut(s) | 113, 202, 482, 725, 853, 902 |
| CviQI | GTAC | 3 cut(s) | 302, 369, 950 |
| DdeI | CTNAG | 6 cut(s) | 337, 362, 441, 925, 933, 987 |
| DpnI | GATC | 4 cut(s) | 242, 519, 786, 1321 |
| DpnII | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| DraI | TTTAAA | 1 cut(s) | 1285 |
| EaeI | YGGCCR | 1 cut(s) | 1192 |
| Eam1104I | CTCTTC | 2 cut(s) | 336, 1274 |
| EarI | CTCTTC | 2 cut(s) | 336, 1274 |
| Eco147I | AGGCCT | 1 cut(s) | 379 |
| Eco24I | GRGCYC | 1 cut(s) | 716 |
| Eco32I | GATATC | 2 cut(s) | 1042, 1265 |
| Eco57I | CTGAAG | 1 cut(s) | 414 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1245 |
| EcoO109I | RGGNCCY | 1 cut(s) | 991 |
| EcoRI | GAATTC | 1 cut(s) | 117 |
| EcoRII | CCWGG | 3 cut(s) | 379, 610, 993 |
| EcoRV | GATATC | 2 cut(s) | 1042, 1265 |
| EcoT38I | GRGCYC | 1 cut(s) | 716 |
| Esp3I | CGTCTC | 1 cut(s) | 533 |
| FaeI | CATG | 6 cut(s) | 116, 205, 485, 728, 856, 905 |
| FaqI | GGGAC | 1 cut(s) | 1264 |
| FatI | CATG | 6 cut(s) | 112, 201, 481, 724, 852, 901 |
| FblI | GTMKAC | 1 cut(s) | 1155 |
| Fnu4HI | GCNGC | 4 cut(s) | 468, 471, 745, 966 |
| FokI | GGATG | 6 cut(s) | 17, 46, 89, 140, 218, 883 |
| FriOI | GRGCYC | 1 cut(s) | 716 |
| Fsp4HI | GCNGC | 4 cut(s) | 468, 471, 745, 966 |
| FspBI | CTAG | 1 cut(s) | 462 |
| GluI | GCNGC | 4 cut(s) | 468, 471, 745, 966 |
| GsuI | CTGGAG | 1 cut(s) | 633 |
| HaeIII | GGCC | 3 cut(s) | 379, 993, 1194 |
| HapII | CCGG | 3 cut(s) | 294, 1021, 1048 |
| Hin1II | CATG | 6 cut(s) | 116, 205, 485, 728, 856, 905 |
| HincII | GTYRAC | 2 cut(s) | 106, 154 |
| HindII | GTYRAC | 2 cut(s) | 106, 154 |
| HindIII | AAGCTT | 1 cut(s) | 876 |
| HinfI | GANTC | 3 cut(s) | 65, 494, 1172 |
| HpaI | GTTAAC | 1 cut(s) | 154 |
| HpaII | CCGG | 3 cut(s) | 294, 1021, 1048 |
| HphI | GGTGA | 4 cut(s) | 136, 1036, 1123, 1222 |
| Hpy166II | GTNNAC | 4 cut(s) | 106, 154, 1011, 1156 |
| Hpy188I | TCNGA | 8 cut(s) | 187, 245, 340, 394, 645, 928, 988, 1039 |
| Hpy188III | TCNNGA | 6 cut(s) | 28, 125, 884, 959, 1273, 1300 |
| Hpy8I | GTNNAC | 4 cut(s) | 106, 154, 1011, 1156 |
| Hpy99I | CGWCG | 2 cut(s) | 152, 1139 |
| HpyAV | CCTTC | 4 cut(s) | 315, 428, 627, 745 |
| HpyCH4III | ACNGT | 8 cut(s) | 85, 227, 425, 763, 798, 954, 1008, 1067 |
| HpyCH4IV | ACGT | 2 cut(s) | 150, 1137 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 294, 410 |
| HpyF3I | CTNAG | 6 cut(s) | 337, 362, 441, 925, 933, 987 |
| HpySE526I | ACGT | 2 cut(s) | 150, 1137 |
| Hsp92II | CATG | 6 cut(s) | 116, 205, 485, 728, 856, 905 |
| KroI | GCCGGC | 1 cut(s) | 293 |
| KroNI | GCCGGC | 1 cut(s) | 295 |
| KspAI | GTTAAC | 1 cut(s) | 154 |
| Kzo9I | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| LmnI | GCTCC | 1 cut(s) | 1294 |
| Lsp1109I | GCAGC | 4 cut(s) | 454, 482, 756, 977 |
| LweI | GCATC | 4 cut(s) | 67, 321, 649, 992 |
| MaeI | CTAG | 1 cut(s) | 462 |
| MaeII | ACGT | 2 cut(s) | 150, 1137 |
| MaeIII | GTNAC | 7 cut(s) | 227, 484, 616, 727, 1129, 1138, 1217 |
| MalI | GATC | 4 cut(s) | 242, 519, 786, 1321 |
| MboI | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| MboII | GAAGA | 6 cut(s) | 113, 247, 250, 353, 527, 1261 |
| MfeI | CAATTG | 2 cut(s) | 262, 510 |
| MflI | RGATCY | 2 cut(s) | 517, 1319 |
| MhlI | GDGCHC | 4 cut(s) | 144, 348, 716, 1013 |
| MlsI | TGGCCA | 1 cut(s) | 1194 |
| MluCI | AATT | 5 cut(s) | 117, 262, 510, 887, 1089 |
| MluNI | TGGCCA | 1 cut(s) | 1194 |
| MmeI | TCCRAC | 3 cut(s) | 717, 1006, 1316 |
| Mox20I | TGGCCA | 1 cut(s) | 1194 |
| MroNI | GCCGGC | 1 cut(s) | 293 |
| MscI | TGGCCA | 1 cut(s) | 1194 |
| MseI | TTAA | 6 cut(s) | 153, 213, 821, 1284, 1308, 1330 |
| MslI | CAYNNNNRTG | 4 cut(s) | 206, 426, 770, 906 |
| Msp20I | TGGCCA | 1 cut(s) | 1194 |
| MspA1I | CMGCKG | 1 cut(s) | 473 |
| MspI | CCGG | 3 cut(s) | 294, 1021, 1048 |
| MspR9I | CCNGG | 5 cut(s) | 381, 612, 995, 1022, 1048 |
| MunI | CAATTG | 2 cut(s) | 262, 510 |
| MvaI | CCWGG | 3 cut(s) | 381, 612, 995 |
| MvnI | CGCG | 1 cut(s) | 734 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 294, 410 |
| NaeI | GCCGGC | 1 cut(s) | 295 |
| NciI | CCSGG | 2 cut(s) | 1022, 1048 |
| NdeII | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| NgoMIV | GCCGGC | 1 cut(s) | 293 |
| NlaIII | CATG | 6 cut(s) | 116, 205, 485, 728, 856, 905 |
| NmuCI | GTSAC | 3 cut(s) | 227, 484, 1129 |
| NspI | RCATGY | 1 cut(s) | 905 |
| PaqCI | CACCTGC | 1 cut(s) | 1198 |
| PceI | AGGCCT | 1 cut(s) | 379 |
| PciI | ACATGT | 1 cut(s) | 901 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 69 |
| PdiI | GCCGGC | 1 cut(s) | 295 |
| PfeI | GAWTC | 3 cut(s) | 65, 494, 1172 |
| PkrI | GCNGC | 4 cut(s) | 469, 472, 746, 967 |
| PscI | ACATGT | 1 cut(s) | 901 |
| Psp6I | CCWGG | 3 cut(s) | 379, 610, 993 |
| PspGI | CCWGG | 3 cut(s) | 379, 610, 993 |
| PspPI | GGNCC | 1 cut(s) | 991 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 37 |
| PstI | CTGCAG | 2 cut(s) | 472, 1209 |
| PstNI | CAGNNNCTG | 1 cut(s) | 932 |
| PsuI | RGATCY | 2 cut(s) | 517, 1319 |
| PvuII | CAGCTG | 1 cut(s) | 473 |
| RsaI | GTAC | 3 cut(s) | 303, 370, 951 |
| RsaNI | GTAC | 3 cut(s) | 302, 369, 950 |
| RseI | CAYNNNNRTG | 4 cut(s) | 206, 426, 770, 906 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SaqAI | TTAA | 6 cut(s) | 153, 213, 821, 1284, 1308, 1330 |
| SatI | GCNGC | 4 cut(s) | 468, 471, 745, 966 |
| Sau3AI | GATC | 4 cut(s) | 240, 517, 784, 1319 |
| Sau96I | GGNCC | 1 cut(s) | 991 |
| ScrFI | CCNGG | 5 cut(s) | 381, 612, 995, 1022, 1048 |
| SduI | GDGCHC | 4 cut(s) | 144, 348, 716, 1013 |
| SfaNI | GCATC | 4 cut(s) | 67, 321, 649, 992 |
| SfcI | CTRYAG | 3 cut(s) | 468, 474, 1205 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 206, 426, 770, 906 |
| SmlI | CTYRAG | 1 cut(s) | 1245 |
| SmoI | CTYRAG | 1 cut(s) | 1245 |
| Sse9I | AATT | 5 cut(s) | 117, 262, 510, 887, 1089 |
| SseBI | AGGCCT | 1 cut(s) | 379 |
| SsiI | CCGC | 2 cut(s) | 732, 1180 |
| SspMI | CTAG | 1 cut(s) | 462 |
| StuI | AGGCCT | 1 cut(s) | 379 |
| StyD4I | CCNGG | 5 cut(s) | 379, 610, 993, 1020, 1046 |
| TaaI | ACNGT | 8 cut(s) | 85, 227, 425, 763, 798, 954, 1008, 1067 |
| TaiI | ACGT | 2 cut(s) | 153, 1140 |
| TaqI | TCGA | 3 cut(s) | 787, 898, 1170 |
| TasI | AATT | 5 cut(s) | 117, 262, 510, 887, 1089 |
| TatI | WGTACW | 1 cut(s) | 949 |
| TfiI | GAWTC | 3 cut(s) | 65, 494, 1172 |
| Tru1I | TTAA | 6 cut(s) | 153, 213, 821, 1284, 1308, 1330 |
| Tru9I | TTAA | 6 cut(s) | 153, 213, 821, 1284, 1308, 1330 |
| TscAI | CASTG | 4 cut(s) | 106, 428, 505, 959 |
| TseFI | GTSAC | 3 cut(s) | 227, 484, 1129 |
| TseI | GCWGC | 4 cut(s) | 467, 470, 744, 965 |
| Tsp45I | GTSAC | 3 cut(s) | 227, 484, 1129 |
| TspDTI | ATGAA | 4 cut(s) | 50, 190, 470, 684 |
| TspGWI | ACGGA | 4 cut(s) | 310, 515, 709, 839 |
| TspRI | CASTG | 4 cut(s) | 106, 428, 505, 959 |
| VneI | GTGCAC | 1 cut(s) | 1009 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1245 |
| XapI | RAATTY | 3 cut(s) | 117, 887, 1089 |
| XceI | RCATGY | 1 cut(s) | 905 |
| XmiI | GTMKAC | 1 cut(s) | 1155 |
| XspI | CTAG | 1 cut(s) | 462 |