Rh2AG668300

ACT domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
88286927 .. 88289534
2608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG668300.1

Sequence Viewer

Length: 1335 bp
ATGGATGATGAGTATGCTAAGTTCGTGAGGCGGATGAACCCACCCAGAGTTGTGATTGACAATGATTCTTGTGAGGATGCTACTATTATCCAGGTTGACAGTTTCAACAAACATGGAATTCTCCTAGATGTTGTCCAAGTGCTTGCAGATGTGAACCTTGTCATTACAAAAGCTTATATCTCATCTGATGGAGTATGGTTCATGGATGTGTTCAACGTGATTGACCGTGATGGCAAAAAAATCAGAGACAAGGACATTATCAATTATATACAAATTAGACTTGAAAGCAATGCCAGCTTTGTACCGTCTATGACAGATTCTGTTGGTGTGACGCCCTCAGAAGAGCATACCTTAATTGAGCTCAGTGGTACTGATAGAACTGGTCTATTGTCTGAAGTGTGTGCTGTTCTTGCAGACCTTCACTGTAATGTGGTAAATGCTGAGATATGGACACACAATGCCAGAGCTGCTGCTGTAGTTCATGTCACAGATGAAACCACTGGTTGCGCAATTAAAGATCCAGCGCGCCTCGCTTCAATAAAGGAGCTGCTTTGCAATGTCCTCAGAGGAAACAATGAGTTGAAGGCTGCCAAAATGACACTTGCAACCTCTGGAGTTACAAATAGAGATAGAAGGTTGCATCAGATTATGTTTGCCGACAGAGATTATGAAAGGGTTGGAAGAGCTGAATTACGCAGAGTTGAGGATAAGGGCTCAAGACCTCAAGTAACTGCCTTTGATTGCAGTCAGAAGGATTACACTGTCATTACTATGAGGGCAAAAGATCGACCAAAATTGTTGTTTGACATCATTTGCACTTTAACGGACATGCAATATGTGGTATTCCATGGAATGGTCAATACAGGGAGGACAGAAGCTTATCAGGAGTTTTATATTCGACATGTTGATGGAGTTCCTATAAGCTCAGAAGCCGAGCGAGAACGTGTCGTGCAGTGTCTTGAAGCAGCCATTGAAAGGCGGGCATCTGAGGGGCTTGAACTACAACTGTGCACTGATGACCGGGTTGGACTTCTCTCAGATATCACTCGGATATTCAGGGAGAACAGTTTGTCTATCAAACGAGCAGAAATTTCAACTAAAGGTGGAAAAGCTTTGGACACTTTCTATGTCACAGATGTGACAGGAAACCCAGTTGATCCCAAGATGATTGATTCAATTCGCAGAGAGATTGGCCAGACCATACTGCAGGTGAAATGCAATTCAACCCCTCCACCACCAAAGTCCCCTCAAGGGACAACAATGGGATTTCTCTTTGGGAACTTGTTCAAAGCTCGAAGTTTCCAGAGTCTGAAATTAATCAGATCCTACTCTTAG

Protein Analysis

444

Amino Acids

49.8

Weight (kDa)

5.99

Isoelectric Point (pI)

36.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACT_ACR9_3rd PF24931 17 - 96 4.5e-07 ACR9-like, ACT-like domain
ACR10_N PF24914 23 - 81 6.1e-06 ACT domain-containing protein ACR10, N-terminal
ACT PF01842 28 - 77 3.3e-06 ACT domain
ACT PF01842 118 - 165 1.2e-08 ACT domain
ACT PF01842 339 - 396 6.2e-09 ACT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1198
Acc16I TGCGCA 1 cut(s) 508
Acc36I ACCTGC 1 cut(s) 1198
AccB7I CCANNNNNTGG 1 cut(s) 853
AccII CGCG 1 cut(s) 526
AciI CCGC 2 cut(s) 31, 979
AclWI GGATC 3 cut(s) 512, 1151, 1317
AcoI YGGCCR 1 cut(s) 1192
AcsI RAATTY 2 cut(s) 117, 1089
AcuI CTGAAG 1 cut(s) 414
AcyI GRCGYC 1 cut(s) 332
AfaI GTAC 2 cut(s) 303, 370
AfiI CCNNNNNNNGG 3 cut(s) 853, 975, 1251
AflIII ACRYGT 2 cut(s) 901, 943
AjnI CCWGG 1 cut(s) 90
AleI CACNNNNGTG 1 cut(s) 1136
Alw21I GWGCWC 2 cut(s) 363, 1013
Alw26I GTCTC 1 cut(s) 240
Alw44I GTGCAC 1 cut(s) 1009
AlwI GGATC 3 cut(s) 512, 1151, 1317
AlwNI CAGNNNCTG 2 cut(s) 320, 1309
AoxI GGCC 1 cut(s) 1192
ApaLI GTGCAC 1 cut(s) 1009
ApeKI GCWGC 5 cut(s) 467, 470, 547, 587, 965
ApoI RAATTY 2 cut(s) 117, 1089
AseI ATTAAT 1 cut(s) 1316
Asp700I GAANNNNTTC 1 cut(s) 1283
AspLEI GCGC 3 cut(s) 509, 526, 528
AsuC2I CCSGG 1 cut(s) 1022
AsuHPI GGTGA 1 cut(s) 1222
BaeGI GKGCMC 1 cut(s) 1013
BalI TGGCCA 1 cut(s) 1194
BanII GRGCYC 2 cut(s) 363, 716
Bbv12I GWGCWC 2 cut(s) 363, 1013
BbvI GCAGC 5 cut(s) 454, 457, 534, 574, 977
BccI CCATC 3 cut(s) 182, 224, 902
BciT130I CCWGG 1 cut(s) 92
BcnI CCSGG 1 cut(s) 1022
BcoDI GTCTC 1 cut(s) 240
BfaI CTAG 1 cut(s) 125
BfmI CTRYAG 2 cut(s) 474, 1205
BfuAI ACCTGC 1 cut(s) 1198
BisI GCNGC 5 cut(s) 468, 471, 548, 588, 966
BlsI GCNGC 5 cut(s) 469, 472, 549, 589, 967
Bme1390I CCNGG 2 cut(s) 92, 1022
BmrFI CCNGG 2 cut(s) 92, 1022
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 3 cut(s) 67, 649, 992
BmuI ACTGGG 1 cut(s) 1145
BpmI CTGGAG 1 cut(s) 633
BpuEI CTTGAG 3 cut(s) 700, 708, 1233
BpuMI CCSGG 1 cut(s) 1022
BsaHI GRCGYC 1 cut(s) 332
BsaJI CCNNGG 1 cut(s) 847
Bsc4I CCNNNNNNNGG 3 cut(s) 853, 975, 1251
Bse1I ACTGG 3 cut(s) 385, 505, 1151
Bse3DI GCAATG 2 cut(s) 295, 562
BseBI CCWGG 1 cut(s) 92
BseDI CCNNGG 1 cut(s) 847
BseGI GGATG 4 cut(s) 10, 39, 82, 211
BseLI CCNNNNNNNGG 3 cut(s) 853, 975, 1251
BseMI GCAATG 2 cut(s) 295, 562
BseMII CTCAG 7 cut(s) 351, 376, 432, 577, 939, 978, 1050
BseNI ACTGG 3 cut(s) 385, 505, 1151
BsePI GCGCGC 1 cut(s) 524
BseSI GKGCMC 1 cut(s) 1013
BseXI GCAGC 5 cut(s) 454, 457, 534, 574, 977
BsgI GTGCAG 1 cut(s) 971
Bsh1236I CGCG 1 cut(s) 526
BshFI GGCC 1 cut(s) 1194
BsiHKAI GWGCWC 2 cut(s) 363, 1013
BsiSI CCGG 1 cut(s) 1021
BslFI GGGAC 2 cut(s) 1228, 1267
BslI CCNNNNNNNGG 3 cut(s) 853, 975, 1251
BsmAI GTCTC 1 cut(s) 240
BsmFI GGGAC 2 cut(s) 1228, 1267
BsnI GGCC 1 cut(s) 1194
Bsp1286I GDGCHC 3 cut(s) 363, 716, 1013
Bsp143I GATC 4 cut(s) 517, 784, 1156, 1322
Bsp19I CCATGG 1 cut(s) 847
BspACI CCGC 2 cut(s) 31, 979
BspANI GGCC 1 cut(s) 1194
BspCNI CTCAG 7 cut(s) 350, 375, 433, 576, 938, 979, 1049
BspFNI CGCG 1 cut(s) 526
BspMAI CTGCAG 1 cut(s) 1209
BspMI ACCTGC 1 cut(s) 1198
BspPI GGATC 3 cut(s) 512, 1151, 1317
BspQI GCTCTTC 2 cut(s) 336, 676
BsrDI GCAATG 2 cut(s) 295, 562
BsrI ACTGG 3 cut(s) 385, 505, 1151
BssECI CCNNGG 1 cut(s) 847
BssHII GCGCGC 1 cut(s) 524
BssMI GATC 4 cut(s) 517, 784, 1156, 1322
BssNI GRCGYC 1 cut(s) 332
BssT1I CCWWGG 1 cut(s) 847
Bst2UI CCWGG 1 cut(s) 92
Bst4CI ACNGT 7 cut(s) 101, 227, 306, 425, 763, 1008, 1067
Bst6I CTCTTC 2 cut(s) 336, 676
BstACI GRCGYC 1 cut(s) 332
BstC8I GCNNGC 4 cut(s) 144, 295, 526, 981
BstDEI CTNAG 9 cut(s) 18, 337, 362, 441, 563, 925, 987, 1036, 1332
BstDSI CCRYGG 1 cut(s) 847
BstF5I GGATG 4 cut(s) 10, 39, 82, 211
BstFNI CGCG 1 cut(s) 526
BstHHI GCGC 3 cut(s) 509, 526, 528
BstKTI GATC 4 cut(s) 520, 787, 1159, 1325
BstMAI GTCTC 1 cut(s) 240
BstMBI GATC 4 cut(s) 517, 784, 1156, 1322
BstMWI GCNNNNNNNGC 4 cut(s) 294, 410, 467, 530
BstNI CCWGG 1 cut(s) 92
BstNSI RCATGY 2 cut(s) 832, 905
BstSCI CCNGG 2 cut(s) 90, 1020
BstSFI CTRYAG 2 cut(s) 474, 1205
BstSLI GKGCMC 1 cut(s) 1013
BstUI CGCG 1 cut(s) 526
BstV1I GCAGC 5 cut(s) 454, 457, 534, 574, 977
BstX2I RGATCY 2 cut(s) 517, 1322
BstYI RGATCY 2 cut(s) 517, 1322
BsuRI GGCC 1 cut(s) 1194
BtgI CCRYGG 1 cut(s) 847
BtsCI GGATG 4 cut(s) 10, 39, 82, 211
BtsI GCAGTG 1 cut(s) 959
BtsIMutI CAGTG 6 cut(s) 370, 421, 498, 759, 959, 1011
BveI ACCTGC 1 cut(s) 1198
Cac8I GCNNGC 4 cut(s) 144, 295, 526, 981
CaiI CAGNNNCTG 2 cut(s) 320, 1309
CfoI GCGC 3 cut(s) 509, 526, 528
CseI GACGC 1 cut(s) 340
Csp6I GTAC 2 cut(s) 302, 369
CviAII CATG 6 cut(s) 113, 202, 482, 829, 848, 902
CviQI GTAC 2 cut(s) 302, 369
DdeI CTNAG 9 cut(s) 18, 337, 362, 441, 563, 925, 987, 1036, 1332
DpnI GATC 4 cut(s) 519, 786, 1158, 1324
DpnII GATC 4 cut(s) 517, 784, 1156, 1322
EaeI YGGCCR 1 cut(s) 1192
Eam1104I CTCTTC 2 cut(s) 336, 676
EarI CTCTTC 2 cut(s) 336, 676
EciI GGCGGA 1 cut(s) 46
Ecl136II GAGCTC 1 cut(s) 361
Eco130I CCWWGG 1 cut(s) 847
Eco24I GRGCYC 2 cut(s) 363, 716
Eco32I GATATC 1 cut(s) 1042
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 1 cut(s) 414
EcoICRI GAGCTC 1 cut(s) 361
EcoRI GAATTC 1 cut(s) 117
EcoRII CCWGG 1 cut(s) 90
EcoRV GATATC 1 cut(s) 1042
EcoT14I CCWWGG 1 cut(s) 847
EcoT38I GRGCYC 2 cut(s) 363, 716
ErhI CCWWGG 1 cut(s) 847
FaeI CATG 6 cut(s) 116, 205, 485, 832, 851, 905
FaqI GGGAC 2 cut(s) 1228, 1267
FatI CATG 6 cut(s) 112, 201, 481, 828, 847, 901
FauI CCCGC 1 cut(s) 972
Fnu4HI GCNGC 5 cut(s) 468, 471, 548, 588, 966
FokI GGATG 4 cut(s) 17, 46, 89, 218
FriOI GRGCYC 2 cut(s) 363, 716
Fsp4HI GCNGC 5 cut(s) 468, 471, 548, 588, 966
FspBI CTAG 1 cut(s) 125
FspI TGCGCA 1 cut(s) 508
GlaI GCGC 3 cut(s) 508, 525, 527
GluI GCNGC 5 cut(s) 468, 471, 548, 588, 966
GsuI CTGGAG 1 cut(s) 633
HaeIII GGCC 1 cut(s) 1194
HapII CCGG 1 cut(s) 1021
HgaI GACGC 1 cut(s) 340
HhaI GCGC 3 cut(s) 509, 526, 528
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 6 cut(s) 116, 205, 485, 832, 851, 905
Hin6I GCGC 3 cut(s) 507, 524, 526
HinP1I GCGC 3 cut(s) 507, 524, 526
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HindIII AAGCTT 3 cut(s) 171, 876, 1110
HinfI GANTC 4 cut(s) 65, 317, 1172, 1306
HpaII CCGG 1 cut(s) 1021
HphI GGTGA 1 cut(s) 1222
Hpy166II GTNNAC 3 cut(s) 97, 154, 1011
Hpy188III TCNNGA 6 cut(s) 25, 612, 717, 884, 959, 1303
Hpy8I GTNNAC 3 cut(s) 97, 154, 1011
HpyAV CCTTC 4 cut(s) 428, 577, 627, 745
HpyCH4III ACNGT 7 cut(s) 101, 227, 306, 425, 763, 1008, 1067
HpyCH4IV ACGT 2 cut(s) 216, 943
HpyF10VI GCNNNNNNNGC 4 cut(s) 294, 410, 467, 530
HpyF3I CTNAG 9 cut(s) 18, 337, 362, 441, 563, 925, 987, 1036, 1332
HpySE526I ACGT 2 cut(s) 216, 943
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 6 cut(s) 116, 205, 485, 832, 851, 905
HspAI GCGC 3 cut(s) 507, 524, 526
Kzo9I GATC 4 cut(s) 517, 784, 1156, 1322
LguI GCTCTTC 2 cut(s) 336, 676
LmnI GCTCC 1 cut(s) 544
Lsp1109I GCAGC 5 cut(s) 454, 457, 534, 574, 977
LweI GCATC 3 cut(s) 67, 649, 992
MaeI CTAG 1 cut(s) 125
MaeII ACGT 2 cut(s) 216, 943
MaeIII GTNAC 6 cut(s) 328, 484, 616, 727, 1129, 1138
MalI GATC 4 cut(s) 519, 786, 1158, 1324
MboI GATC 4 cut(s) 517, 784, 1156, 1322
MboII GAAGA 2 cut(s) 353, 693
MflI RGATCY 2 cut(s) 517, 1322
MhlI GDGCHC 3 cut(s) 363, 716, 1013
MlsI TGGCCA 1 cut(s) 1194
MluNI TGGCCA 1 cut(s) 1194
MlyI GAGTC 1 cut(s) 1315
MmeI TCCRAC 2 cut(s) 658, 1006
Mox20I TGGCCA 1 cut(s) 1194
MroXI GAANNNNTTC 1 cut(s) 1283
MscI TGGCCA 1 cut(s) 1194
MseI TTAA 4 cut(s) 353, 513, 821, 1316
MslI CAYNNNNRTG 5 cut(s) 206, 426, 770, 906, 1136
Msp20I TGGCCA 1 cut(s) 1194
MspI CCGG 1 cut(s) 1021
MspR9I CCNGG 2 cut(s) 92, 1022
MvaI CCWGG 1 cut(s) 92
MvnI CGCG 1 cut(s) 526
MwoI GCNNNNNNNGC 4 cut(s) 294, 410, 467, 530
NciI CCSGG 1 cut(s) 1022
NcoI CCATGG 1 cut(s) 847
NdeII GATC 4 cut(s) 517, 784, 1156, 1322
NlaIII CATG 6 cut(s) 116, 205, 485, 832, 851, 905
NmeAIII GCCGAG 1 cut(s) 958
NmuCI GTSAC 4 cut(s) 328, 484, 1129, 1138
NsbI TGCGCA 1 cut(s) 508
NspI RCATGY 2 cut(s) 832, 905
OliI CACNNNNGTG 1 cut(s) 1136
PaqCI CACCTGC 1 cut(s) 1198
PauI GCGCGC 1 cut(s) 524
PciI ACATGT 1 cut(s) 901
PciSI GCTCTTC 2 cut(s) 336, 676
PdmI GAANNNNTTC 1 cut(s) 1283
PfeI GAWTC 3 cut(s) 65, 317, 1172
PflMI CCANNNNNTGG 1 cut(s) 853
PkrI GCNGC 5 cut(s) 469, 472, 549, 589, 967
PleI GAGTC 1 cut(s) 1314
PpsI GAGTC 1 cut(s) 1314
PscI ACATGT 1 cut(s) 901
PshBI ATTAAT 1 cut(s) 1316
Psp124BI GAGCTC 1 cut(s) 363
Psp6I CCWGG 1 cut(s) 90
PspGI CCWGG 1 cut(s) 90
PsrI GAACNNNNNNTAC 1 cut(s) 37
PstI CTGCAG 1 cut(s) 1209
PstNI CAGNNNCTG 2 cut(s) 320, 1309
PsuI RGATCY 2 cut(s) 517, 1322
PteI GCGCGC 1 cut(s) 524
RsaI GTAC 2 cut(s) 303, 370
RsaNI GTAC 2 cut(s) 302, 369
RseI CAYNNNNRTG 5 cut(s) 206, 426, 770, 906, 1136
SacI GAGCTC 1 cut(s) 363
SapI GCTCTTC 2 cut(s) 336, 676
SaqAI TTAA 4 cut(s) 353, 513, 821, 1316
SatI GCNGC 5 cut(s) 468, 471, 548, 588, 966
Sau3AI GATC 4 cut(s) 517, 784, 1156, 1322
SchI GAGTC 1 cut(s) 1315
ScrFI CCNGG 2 cut(s) 92, 1022
SduI GDGCHC 3 cut(s) 363, 716, 1013
SfaNI GCATC 3 cut(s) 67, 649, 992
SfcI CTRYAG 2 cut(s) 474, 1205
SmiMI CAYNNNNRTG 5 cut(s) 206, 426, 770, 906, 1136
SmlI CTYRAG 3 cut(s) 715, 723, 1248
SmoI CTYRAG 3 cut(s) 715, 723, 1248
SsiI CCGC 2 cut(s) 31, 979
SspMI CTAG 1 cut(s) 125
SstI GAGCTC 1 cut(s) 363
StyD4I CCNGG 2 cut(s) 90, 1020
StyI CCWWGG 1 cut(s) 847
TaaI ACNGT 7 cut(s) 101, 227, 306, 425, 763, 1008, 1067
TaiI ACGT 2 cut(s) 219, 946
TaqI TCGA 3 cut(s) 787, 898, 1294
TfiI GAWTC 3 cut(s) 65, 317, 1172
Tru1I TTAA 4 cut(s) 353, 513, 821, 1316
Tru9I TTAA 4 cut(s) 353, 513, 821, 1316
TscAI CASTG 6 cut(s) 370, 428, 505, 766, 959, 1018
TseFI GTSAC 4 cut(s) 328, 484, 1129, 1138
TseI GCWGC 5 cut(s) 467, 470, 547, 587, 965
Tsp45I GTSAC 4 cut(s) 328, 484, 1129, 1138
TspDTI ATGAA 5 cut(s) 50, 190, 470, 507, 684
TspGWI ACGGA 1 cut(s) 839
TspRI CASTG 6 cut(s) 370, 428, 505, 766, 959, 1018
Van91I CCANNNNNTGG 1 cut(s) 853
VneI GTGCAC 1 cut(s) 1009
VspI ATTAAT 1 cut(s) 1316
XapI RAATTY 2 cut(s) 117, 1089
XceI RCATGY 2 cut(s) 832, 905
XmnI GAANNNNTTC 1 cut(s) 1283
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.