pycom17g01630

Succinate dehydrogenase ubiquinone iron-sulfur subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
1062979 .. 1064931
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g01630.2

Sequence Viewer

Length: 852 bp
ATGGCGACGGGGTTGATACGGAGGGCCATTGCTTCGGCGTCGTCTAGATCGACGGCGGCGTCGTTTCGTTATGTGTGCGTTCGGACCATGGCGTCGGAGGCCCAGGCCCAGCAAGTGGACCTCAAGGCCCGGGACAAAACGGACGTCAAGACCTTCTCAATCTACCGGTGGAACCCGGACAACCCGAAGAAGCCGGAGCTCAAGGAGTACGAGATCGACCTCAAGGAGTGCGGGCCCATGGTGCTGGACGCCCTCATCAAGATAAAGAACGAGATGGACCCCACCCTCACCTTCCGCCGATCTTGCCGGGAAGGGATCTGCGGCTCCTGCGCCATGAACATCGACGGCTGCAACGGCCTGGCCTGCCTGACGAAGATTGCGCCGTCGAACGCAGGCGCCACGATGATCACGCCGCTGCCGCATATGTTTGTGATCAAGGACCTGGTGGTGGACAGGACTAATTTCTACAACCAGTACGAGAGCATCGAGCCGTGGCTGAAGCGGAAGACCCCGGCGGCGGAGCTGGATGGGAAGGAGATAAGGCAGAGCAAGAAGGATAGGGCGAAGCTGGATGGGATGTACGAGTGCATTCTCTGCGCTTGCTGTAGCACATCCTGCCCTAGCTACTGGTGGAACCCTGAGTCCTATTTGGGCCCAGCCGCCTTGCTCCACGCCAATCGGTGGATAAGTGACAGCCGTGACGAATACACGAAGGAACGTCTGGATGCCATAAATGACGAGTTCAAGCTCTACCGGTGCCATACCATATTGAACTGTGCTCGTGCCTGCCCGAAGGGTTTGAACCCCGGAAAGCAGATCCAACATATCAAGCAGCTCCAGCTGAAGCCCTAA

Protein Analysis

284

Amino Acids

32.01

Weight (kDa)

8.82

Isoelectric Point (pI)

49.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 58, 91
AatII GACGTC 1 cut(s) 147
AccB1I GGYRCC 2 cut(s) 395, 756
AccB7I CCANNNNNTGG 2 cut(s) 115, 681
AclWI GGATC 2 cut(s) 323, 811
AcuI CTGAAG 1 cut(s) 518
AcyI GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
AfaI GTAC 3 cut(s) 209, 476, 581
AfiI CCNNNNNNNGG 4 cut(s) 115, 448, 517, 681
AgeI ACCGGT 2 cut(s) 165, 753
AgsI TTSAA 3 cut(s) 745, 772, 802
AjnI CCWGG 3 cut(s) 102, 357, 441
AloI GAACNNNNNNTCC 2 cut(s) 626, 658
AluBI AGCT 7 cut(s) 199, 523, 568, 624, 748, 835, 841
AluI AGCT 7 cut(s) 199, 523, 568, 624, 748, 835, 841
Alw21I GWGCWC 2 cut(s) 201, 781
AlwI GGATC 2 cut(s) 323, 811
Ama87I CYCGRG 1 cut(s) 129
AoxI GGCC 8 cut(s) 24, 99, 105, 126, 233, 355, 360, 652
ApaI GGGCCC 2 cut(s) 237, 656
ApeKI GCWGC 3 cut(s) 348, 415, 832
ArsI GACNNNNNNTTYG 2 cut(s) 129, 161
AsiGI ACCGGT 2 cut(s) 165, 753
AspLEI GCGC 4 cut(s) 332, 382, 398, 599
AsuC2I CCSGG 6 cut(s) 130, 131, 176, 308, 512, 807
AsuHPI GGTGA 1 cut(s) 280
AvaI CYCGRG 1 cut(s) 129
AvaII GGWCC 4 cut(s) 84, 118, 277, 439
BaeGI GKGCMC 2 cut(s) 237, 656
BanI GGYRCC 2 cut(s) 395, 756
BanII GRGCYC 3 cut(s) 201, 237, 656
BauI CACGAG 1 cut(s) 780
BbsI GAAGAC 1 cut(s) 512
Bbv12I GWGCWC 2 cut(s) 201, 781
BbvI GCAGC 3 cut(s) 335, 402, 844
BccI CCATC 3 cut(s) 268, 521, 566
BceAI ACGGC 6 cut(s) 69, 361, 367, 370, 475, 681
BciT130I CCWGG 3 cut(s) 104, 359, 443
BclI TGATCA 2 cut(s) 405, 432
BcnI CCSGG 6 cut(s) 130, 131, 176, 308, 512, 807
BfaI CTAG 2 cut(s) 45, 621
BfmI CTRYAG 1 cut(s) 604
BfoI RGCGCY 1 cut(s) 399
BisI GCNGC 9 cut(s) 57, 322, 349, 413, 416, 419, 516, 660, 833
BlsI GCNGC 9 cut(s) 58, 323, 350, 414, 417, 420, 517, 661, 834
Bme1390I CCNGG 9 cut(s) 104, 130, 131, 176, 308, 359, 443, 512, 807
Bme18I GGWCC 4 cut(s) 84, 118, 277, 439
BmeT110I CYCGRG 1 cut(s) 129
BmiI GGNNCC 8 cut(s) 173, 235, 279, 325, 397, 635, 654, 758
BmrFI CCNGG 9 cut(s) 104, 130, 131, 176, 308, 359, 443, 512, 807
BmsI GCATC 2 cut(s) 492, 715
BpiI GAAGAC 1 cut(s) 512
BpmI CTGGAG 1 cut(s) 821
BpuEI CTTGAG 3 cut(s) 107, 185, 206
BpuMI CCSGG 6 cut(s) 130, 131, 176, 308, 512, 807
BsaHI GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
BsaJI CCNNGG 7 cut(s) 87, 102, 129, 237, 491, 510, 805
BsaWI WCCGGW 2 cut(s) 165, 753
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 448, 517, 681
Bse118I RCCGGY 2 cut(s) 165, 753
Bse1I ACTGG 2 cut(s) 472, 632
Bse3DI GCAATG 1 cut(s) 27
BseBI CCWGG 3 cut(s) 104, 359, 443
BseDI CCNNGG 7 cut(s) 87, 102, 129, 237, 491, 510, 805
BseGI GGATG 5 cut(s) 532, 577, 582, 611, 730
BseLI CCNNNNNNNGG 4 cut(s) 115, 448, 517, 681
BseMI GCAATG 1 cut(s) 27
BseMII CTCAG 1 cut(s) 630
BseNI ACTGG 2 cut(s) 472, 632
BseSI GKGCMC 2 cut(s) 237, 656
BseXI GCAGC 3 cut(s) 335, 402, 844
BseYI CCCAGC 2 cut(s) 108, 655
BshFI GGCC 8 cut(s) 26, 101, 107, 128, 235, 357, 362, 654
BshNI GGYRCC 2 cut(s) 395, 756
BshTI ACCGGT 2 cut(s) 165, 753
BsiHKAI GWGCWC 2 cut(s) 201, 781
BsiHKCI CYCGRG 1 cut(s) 129
BsiSI CCGG 8 cut(s) 130, 166, 176, 194, 307, 512, 754, 807
BslFI GGGAC 1 cut(s) 146
BslI CCNNNNNNNGG 4 cut(s) 115, 448, 517, 681
BsmFI GGGAC 1 cut(s) 146
BsmI GAATGC 1 cut(s) 588
BsnI GGCC 8 cut(s) 26, 101, 107, 128, 235, 357, 362, 654
BsoBI CYCGRG 1 cut(s) 129
Bsp120I GGGCCC 2 cut(s) 233, 652
Bsp1286I GDGCHC 4 cut(s) 201, 237, 656, 781
Bsp143I GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
Bsp19I CCATGG 2 cut(s) 87, 237
BspANI GGCC 8 cut(s) 26, 101, 107, 128, 235, 357, 362, 654
BspCNI CTCAG 1 cut(s) 631
BspLI GGNNCC 8 cut(s) 173, 235, 279, 325, 397, 635, 654, 758
BspPI GGATC 2 cut(s) 323, 811
BspT107I GGYRCC 2 cut(s) 395, 756
BsrDI GCAATG 1 cut(s) 27
BsrFI RCCGGY 2 cut(s) 165, 753
BsrI ACTGG 2 cut(s) 472, 632
BssAI RCCGGY 2 cut(s) 165, 753
BssECI CCNNGG 7 cut(s) 87, 102, 129, 237, 491, 510, 805
BssMI GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
BssNI GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
BssSI CACGAG 1 cut(s) 780
BssT1I CCWWGG 2 cut(s) 87, 237
Bst2BI CACGAG 1 cut(s) 780
Bst2UI CCWGG 3 cut(s) 104, 359, 443
Bst4CI ACNGT 1 cut(s) 776
BstACI GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
BstAPI GCANNNNNTGC 2 cut(s) 594, 615
BstC8I GCNNGC 5 cut(s) 233, 364, 394, 601, 787
BstDEI CTNAG 1 cut(s) 639
BstDSI CCRYGG 3 cut(s) 87, 237, 491
BstF5I GGATG 5 cut(s) 532, 577, 582, 611, 730
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 4 cut(s) 332, 382, 398, 599
BstKTI GATC 7 cut(s) 50, 216, 302, 318, 408, 435, 819
BstMBI GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
BstNI CCWGG 3 cut(s) 104, 359, 443
BstSCI CCNGG 9 cut(s) 102, 128, 129, 174, 306, 357, 441, 510, 805
BstSFI CTRYAG 1 cut(s) 604
BstSLI GKGCMC 2 cut(s) 237, 656
BstV1I GCAGC 3 cut(s) 335, 402, 844
BstV2I GAAGAC 1 cut(s) 512
BstX2I RGATCY 2 cut(s) 315, 816
BstXI CCANNNNNNTGG 1 cut(s) 244
BstYI RGATCY 2 cut(s) 315, 816
BsuRI GGCC 8 cut(s) 26, 101, 107, 128, 235, 357, 362, 654
BtgI CCRYGG 3 cut(s) 87, 237, 491
BtsCI GGATG 5 cut(s) 532, 577, 582, 611, 730
Cac8I GCNNGC 5 cut(s) 233, 364, 394, 601, 787
CfoI GCGC 4 cut(s) 332, 382, 398, 599
Cfr10I RCCGGY 2 cut(s) 165, 753
Cfr9I CCCGGG 1 cut(s) 129
CseI GACGC 4 cut(s) 27, 48, 81, 257
CsiI ACCWGGT 1 cut(s) 441
Csp6I GTAC 3 cut(s) 208, 475, 580
CspAI ACCGGT 2 cut(s) 165, 753
CviAII CATG 3 cut(s) 88, 238, 334
CviQI GTAC 3 cut(s) 208, 475, 580
DdeI CTNAG 1 cut(s) 639
DinI GGCGCC 1 cut(s) 397
DpnI GATC 7 cut(s) 49, 215, 301, 317, 407, 434, 818
DpnII GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
DrdI GACNNNNNNGTC 2 cut(s) 58, 91
DseDI GACNNNNNNGTC 2 cut(s) 58, 91
EciI GGCGGA 2 cut(s) 284, 533
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 2 cut(s) 87, 237
Eco24I GRGCYC 3 cut(s) 201, 237, 656
Eco47I GGWCC 4 cut(s) 84, 118, 277, 439
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 518
Eco88I CYCGRG 1 cut(s) 129
EcoICRI GAGCTC 1 cut(s) 199
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 3 cut(s) 102, 357, 441
EcoT14I CCWWGG 2 cut(s) 87, 237
EcoT38I GRGCYC 3 cut(s) 201, 237, 656
EgeI GGCGCC 1 cut(s) 397
EheI GGCGCC 1 cut(s) 397
ErhI CCWWGG 2 cut(s) 87, 237
FaeI CATG 3 cut(s) 91, 241, 337
FaqI GGGAC 1 cut(s) 146
FatI CATG 3 cut(s) 87, 237, 333
FauI CCCGC 1 cut(s) 224
FauNDI CATATG 1 cut(s) 423
FbaI TGATCA 2 cut(s) 405, 432
Fnu4HI GCNGC 9 cut(s) 57, 322, 349, 413, 416, 419, 516, 660, 833
FokI GGATG 5 cut(s) 539, 584, 589, 598, 737
FriOI GRGCYC 3 cut(s) 201, 237, 656
Fsp4HI GCNGC 9 cut(s) 57, 322, 349, 413, 416, 419, 516, 660, 833
FspBI CTAG 2 cut(s) 45, 621
GlaI GCGC 4 cut(s) 331, 381, 397, 598
GluI GCNGC 9 cut(s) 57, 322, 349, 413, 416, 419, 516, 660, 833
GsaI CCCAGC 2 cut(s) 112, 659
GsuI CTGGAG 1 cut(s) 821
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 8 cut(s) 26, 101, 107, 128, 235, 357, 362, 654
HapII CCGG 8 cut(s) 130, 166, 176, 194, 307, 512, 754, 807
HgaI GACGC 4 cut(s) 27, 48, 81, 257
HhaI GCGC 4 cut(s) 332, 382, 398, 599
Hin1I GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
Hin1II CATG 3 cut(s) 91, 241, 337
Hin6I GCGC 4 cut(s) 330, 380, 396, 597
HinP1I GCGC 4 cut(s) 330, 380, 396, 597
HinfI GANTC 1 cut(s) 641
HpaII CCGG 8 cut(s) 130, 166, 176, 194, 307, 512, 754, 807
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 2 cut(s) 118, 451
Hpy188I TCNGA 2 cut(s) 84, 97
Hpy188III TCNNGA 4 cut(s) 45, 148, 259, 722
Hpy8I GTNNAC 2 cut(s) 118, 451
Hpy99I CGWCG 7 cut(s) 10, 43, 55, 64, 97, 347, 388
HpyAV CCTTC 7 cut(s) 163, 301, 305, 526, 547, 706, 787
HpyCH4III ACNGT 1 cut(s) 776
HpyCH4IV ACGT 2 cut(s) 144, 718
HpyCH4V TGCA 2 cut(s) 351, 588
HpyF3I CTNAG 1 cut(s) 639
HpySE526I ACGT 2 cut(s) 144, 718
Hsp92I GRCGYC 6 cut(s) 38, 59, 92, 144, 249, 396
Hsp92II CATG 3 cut(s) 91, 241, 337
HspAI GCGC 4 cut(s) 330, 380, 396, 597
KasI GGCGCC 1 cut(s) 395
Ksp22I TGATCA 2 cut(s) 405, 432
Kzo9I GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
LmnI GCTCC 5 cut(s) 196, 329, 520, 672, 840
Lsp1109I GCAGC 3 cut(s) 335, 402, 844
LweI GCATC 2 cut(s) 492, 715
MabI ACCWGGT 1 cut(s) 441
MaeI CTAG 2 cut(s) 45, 621
MaeII ACGT 2 cut(s) 144, 718
MaeIII GTNAC 2 cut(s) 689, 698
MalI GATC 7 cut(s) 49, 215, 301, 317, 407, 434, 818
MboI GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
MboII GAAGA 3 cut(s) 199, 385, 517
MflI RGATCY 2 cut(s) 315, 816
MhlI GDGCHC 4 cut(s) 201, 237, 656, 781
MluCI AATT 1 cut(s) 460
Mly113I GGCGCC 1 cut(s) 396
MlyI GAGTC 1 cut(s) 650
MmeI TCCRAC 2 cut(s) 75, 844
MnlI CCTC 6 cut(s) 15, 91, 131, 230, 263, 296
MspA1I CMGCKG 2 cut(s) 415, 841
MspI CCGG 8 cut(s) 130, 166, 176, 194, 307, 512, 754, 807
MspR9I CCNGG 9 cut(s) 104, 130, 131, 176, 308, 359, 443, 512, 807
Mva1269I GAATGC 1 cut(s) 588
MvaI CCWGG 3 cut(s) 104, 359, 443
NarI GGCGCC 1 cut(s) 396
NciI CCSGG 6 cut(s) 130, 131, 176, 308, 512, 807
NcoI CCATGG 2 cut(s) 87, 237
NdeI CATATG 1 cut(s) 423
NdeII GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
NlaIII CATG 3 cut(s) 91, 241, 337
NlaIV GGNNCC 8 cut(s) 173, 235, 279, 325, 397, 635, 654, 758
NmuCI GTSAC 2 cut(s) 689, 698
PcsI WCGNNNNNNNCGW 4 cut(s) 47, 56, 59, 483
PctI GAATGC 1 cut(s) 588
PflMI CCANNNNNTGG 2 cut(s) 115, 681
PinAI ACCGGT 2 cut(s) 165, 753
PkrI GCNGC 9 cut(s) 58, 323, 350, 414, 417, 420, 517, 661, 834
PleI GAGTC 1 cut(s) 649
PluTI GGCGCC 1 cut(s) 399
PpsI GAGTC 1 cut(s) 649
PpuMI RGGWCCY 1 cut(s) 439
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 3 cut(s) 102, 357, 441
PspFI CCCAGC 2 cut(s) 108, 655
PspGI CCWGG 3 cut(s) 102, 357, 441
PspN4I GGNNCC 8 cut(s) 173, 235, 279, 325, 397, 635, 654, 758
PspOMI GGGCCC 2 cut(s) 233, 652
PspPPI RGGWCCY 1 cut(s) 439
PsuI RGATCY 2 cut(s) 315, 816
PvuII CAGCTG 1 cut(s) 841
RsaI GTAC 3 cut(s) 209, 476, 581
RsaNI GTAC 3 cut(s) 208, 475, 580
SacI GAGCTC 1 cut(s) 201
SatI GCNGC 9 cut(s) 57, 322, 349, 413, 416, 419, 516, 660, 833
Sau3AI GATC 7 cut(s) 47, 213, 299, 315, 405, 432, 816
SchI GAGTC 1 cut(s) 650
ScrFI CCNGG 9 cut(s) 104, 130, 131, 176, 308, 359, 443, 512, 807
SduI GDGCHC 4 cut(s) 201, 237, 656, 781
SexAI ACCWGGT 1 cut(s) 441
SfaNI GCATC 2 cut(s) 492, 715
SfcI CTRYAG 1 cut(s) 604
SfoI GGCGCC 1 cut(s) 397
SinI GGWCC 4 cut(s) 84, 118, 277, 439
SmaI CCCGGG 1 cut(s) 131
SmlI CTYRAG 3 cut(s) 122, 200, 221
SmoI CTYRAG 3 cut(s) 122, 200, 221
Sse9I AATT 1 cut(s) 460
SspDI GGCGCC 1 cut(s) 395
SspMI CTAG 2 cut(s) 45, 621
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 9 cut(s) 102, 128, 129, 174, 306, 357, 441, 510, 805
StyI CCWWGG 2 cut(s) 87, 237
TaaI ACNGT 1 cut(s) 776
TaiI ACGT 2 cut(s) 147, 721
TaqI TCGA 5 cut(s) 50, 216, 342, 386, 486
TasI AATT 1 cut(s) 460
TauI GCSGC 6 cut(s) 59, 324, 415, 421, 518, 662
TseFI GTSAC 2 cut(s) 689, 698
TseI GCWGC 3 cut(s) 348, 415, 832
Tsp45I GTSAC 2 cut(s) 689, 698
TspDTI ATGAA 1 cut(s) 350
TspGWI ACGGA 2 cut(s) 34, 155
TspMI CCCGGG 1 cut(s) 129
Van91I CCANNNNNTGG 2 cut(s) 115, 681
VpaK11BI GGWCC 4 cut(s) 84, 118, 277, 439
XbaI TCTAGA 1 cut(s) 44
XmaI CCCGGG 1 cut(s) 129
XspI CTAG 2 cut(s) 45, 621
ZraI GACGTC 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.