pycom17g14170

Protein FLUORESCENT IN BLUE LIGHT

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0003675
Physical Location & Seq
Reverse (-)
11723285 .. 11725727
2443 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1053 bp
ATGGACATTTCAACTATCCAAAACAAAATCCTTTGTGCTCATGTCGGATGGCAAAGAAACCATTTTTATACGCGCACGGATTCTGACTGCTCATATCGAGAAAAGCTCATTGGGAACAACCACACCAACGTTTATCCGAACCAAATGGCAGTGGTAGCCCGTTTCTCCTGCTGCTTCTTCACCCACACCAAGAACTCCGGCCGATCTCCGCCGTCCGATCAAATCCCCCTCAACTCCAATCTTTCCGAACCCGGAAAGTTAGCTTCTCTTCCGTTTAAAGTCGAAAAGCTTGTTTCATCGTTTGGAAATAAATTAGATGGAGTGTGTGAGATCCACCATATGTTGCCAAACTCAAAATGTCAGGGAGACATAAAGTTGAGATTCCCAGCAATGGGACTTCTCTTCGGCAATGCCTTAATGTTGACAACGCCATTGAAAGCTTTGGCAGAAACATGTGAGGCTGACAACTCTGGTTTCAGCATGCCTGTACTGCTCTTTGTTGCCCTTGTTGGGGCTACTGTTGGTGGCTTGGTTGCTCGGCAAAGGAAAGGGGAATTACAGCGAGTGAATGAACAGTTGCGTCAAATCAATCAATCTCTAAGAAGGCAAGCTAAGATTGAGTCATATGCTCCGAGTTTGAGTTATTCGCCAATTGGTGCAAAAGTACTACCAGAGAGTGAGGTGATAGTTGATCCGAGGAAGCACGATTTGATTTCTCGACTGAAATCTGGGAAGAATTTTTTGAGAAACCAAGAAACAGAAAAAGCACTCAACGAGTTTAAGACTGCGCTTGAGCTTGCCCAAAGTGTGAAGGACCCAATTGAGGAAAAGAAGGCTGCAAGAGGTTTAGGAGCCTCACTGCAAAGATTGGGCAAGTACCGAGATGCCATTAAATACCACTCTTTGGTTCTGGACATCTCCAAGCGAGAAGGAGAAGACTCAGGAAACACAGAAGCTTACGGTGCAATTGCTGATTGTTATACTGAGCTTGGTGATCTGGAGCGTGCAGGGAAGTTCTATGACAATTATATTGCGAGGTTGGAGTCAGACTGA

Protein Analysis

351

Amino Acids

38.91

Weight (kDa)

8.78

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_12 PF13424 280 - 344 8.7e-09 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 904
AccII CGCG 1 cut(s) 73
AciI CCGC 1 cut(s) 209
AclI AACGTT 1 cut(s) 129
AclWI GGATC 2 cut(s) 325, 686
AcoI YGGCCR 1 cut(s) 199
AcsI RAATTY 1 cut(s) 736
AfaI GTAC 3 cut(s) 489, 666, 878
AfiI CCNNNNNNNGG 6 cut(s) 391, 392, 510, 511, 823, 904
AflIII ACRYGT 1 cut(s) 452
AgsI TTSAA 2 cut(s) 12, 436
AjuI GAANNNNNNNTTGG 2 cut(s) 93, 125
AluBI AGCT 8 cut(s) 106, 263, 289, 440, 611, 796, 956, 988
AluI AGCT 8 cut(s) 106, 263, 289, 440, 611, 796, 956, 988
Alw21I GWGCWC 1 cut(s) 40
Alw26I GTCTC 1 cut(s) 360
AlwI GGATC 2 cut(s) 325, 686
AoxI GGCC 1 cut(s) 199
ApeKI GCWGC 2 cut(s) 171, 836
ApoI RAATTY 1 cut(s) 736
AspLEI GCGC 2 cut(s) 75, 790
AspS9I GGNCC 1 cut(s) 814
AsuC2I CCSGG 1 cut(s) 252
AsuHPI GGTGA 3 cut(s) 172, 694, 1004
AvaII GGWCC 1 cut(s) 814
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 1 cut(s) 40
BbvI GCAGC 2 cut(s) 158, 823
BccI CCATC 2 cut(s) 42, 311
BceAI ACGGC 1 cut(s) 196
BcnI CCSGG 1 cut(s) 252
BcoDI GTCTC 1 cut(s) 360
BisI GCNGC 2 cut(s) 172, 837
BlsI GCNGC 2 cut(s) 173, 838
BmcAI AGTACT 1 cut(s) 666
Bme1390I CCNGG 1 cut(s) 252
Bme18I GGWCC 1 cut(s) 814
BmgT120I GGNCC 1 cut(s) 814
BmiI GGNNCC 2 cut(s) 816, 853
BmrFI CCNGG 1 cut(s) 252
BmsI GCATC 1 cut(s) 874
BpiI GAAGAC 1 cut(s) 942
BplI GAGNNNNNCTC 2 cut(s) 90, 122
BpmI CTGGAG 1 cut(s) 1019
BpuEI CTTGAG 1 cut(s) 812
BpuMI CCSGG 1 cut(s) 252
BsaJI CCNNGG 1 cut(s) 695
Bsc4I CCNNNNNNNGG 6 cut(s) 391, 392, 510, 511, 823, 904
Bse3DI GCAATG 2 cut(s) 396, 415
BseDI CCNNGG 1 cut(s) 695
BseGI GGATG 1 cut(s) 53
BseLI CCNNNNNNNGG 6 cut(s) 391, 392, 510, 511, 823, 904
BseMI GCAATG 2 cut(s) 396, 415
BseMII CTCAG 2 cut(s) 954, 975
BseX3I CGGCCG 1 cut(s) 199
BseXI GCAGC 2 cut(s) 158, 823
BseYI CCCAGC 1 cut(s) 385
BsgI GTGCAG 1 cut(s) 1026
Bsh1236I CGCG 1 cut(s) 73
Bsh1285I CGRYCG 1 cut(s) 202
BshFI GGCC 1 cut(s) 201
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 40
BsiSI CCGG 2 cut(s) 198, 252
BslFI GGGAC 1 cut(s) 408
BslI CCNNNNNNNGG 6 cut(s) 391, 392, 510, 511, 823, 904
BsmAI GTCTC 1 cut(s) 360
BsmFI GGGAC 1 cut(s) 408
BsnI GGCC 1 cut(s) 201
Bsp1286I GDGCHC 1 cut(s) 40
Bsp143I GATC 5 cut(s) 203, 217, 330, 691, 994
BspACI CCGC 1 cut(s) 209
BspANI GGCC 1 cut(s) 201
BspCNI CTCAG 2 cut(s) 953, 976
BspFNI CGCG 1 cut(s) 73
BspLI GGNNCC 2 cut(s) 816, 853
BspPI GGATC 2 cut(s) 325, 686
BsrDI GCAATG 2 cut(s) 396, 415
BssECI CCNNGG 1 cut(s) 695
BssMI GATC 5 cut(s) 203, 217, 330, 691, 994
Bst4CI ACNGT 3 cut(s) 520, 576, 962
Bst6I CTCTTC 2 cut(s) 273, 407
BstC8I GCNNGC 4 cut(s) 482, 609, 798, 1005
BstDEI CTNAG 4 cut(s) 599, 612, 940, 984
BstF5I GGATG 1 cut(s) 53
BstFNI CGCG 1 cut(s) 73
BstHHI GCGC 2 cut(s) 75, 790
BstKTI GATC 5 cut(s) 206, 220, 333, 694, 997
BstMAI GTCTC 1 cut(s) 360
BstMBI GATC 5 cut(s) 203, 217, 330, 691, 994
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 3 cut(s) 155, 490, 962
BstNSI RCATGY 2 cut(s) 456, 484
BstSCI CCNGG 1 cut(s) 250
BstUI CGCG 1 cut(s) 73
BstV1I GCAGC 2 cut(s) 158, 823
BstV2I GAAGAC 1 cut(s) 942
BstX2I RGATCY 1 cut(s) 330
BstYI RGATCY 1 cut(s) 330
BstZI CGGCCG 1 cut(s) 199
BsuRI GGCC 1 cut(s) 201
BtsCI GGATG 1 cut(s) 53
BtsI GCAGTG 2 cut(s) 156, 857
BtsIMutI CAGTG 2 cut(s) 156, 857
Cac8I GCNNGC 4 cut(s) 482, 609, 798, 1005
CfoI GCGC 2 cut(s) 75, 790
Cfr13I GGNCC 1 cut(s) 814
CseI GACGC 1 cut(s) 569
Csp6I GTAC 3 cut(s) 488, 665, 877
CviAII CATG 3 cut(s) 41, 453, 481
CviQI GTAC 3 cut(s) 488, 665, 877
DdeI CTNAG 4 cut(s) 599, 612, 940, 984
DpnI GATC 5 cut(s) 205, 219, 332, 693, 996
DpnII GATC 5 cut(s) 203, 217, 330, 691, 994
DraI TTTAAA 1 cut(s) 277
EaeI YGGCCR 1 cut(s) 199
EagI CGGCCG 1 cut(s) 199
Eam1104I CTCTTC 2 cut(s) 273, 407
EarI CTCTTC 2 cut(s) 273, 407
EciI GGCGGA 1 cut(s) 198
EclXI CGGCCG 1 cut(s) 199
Eco47I GGWCC 1 cut(s) 814
Eco52I CGGCCG 1 cut(s) 199
EcoO109I RGGNCCY 1 cut(s) 814
FaeI CATG 3 cut(s) 44, 456, 484
FaqI GGGAC 1 cut(s) 408
FatI CATG 3 cut(s) 40, 452, 480
FauNDI CATATG 2 cut(s) 339, 625
Fnu4HI GCNGC 2 cut(s) 172, 837
FokI GGATG 1 cut(s) 60
Fsp4HI GCNGC 2 cut(s) 172, 837
GlaI GCGC 2 cut(s) 74, 789
GluI GCNGC 2 cut(s) 172, 837
GsaI CCCAGC 1 cut(s) 389
GsuI CTGGAG 1 cut(s) 1019
HaeIII GGCC 1 cut(s) 201
HapII CCGG 2 cut(s) 198, 252
HgaI GACGC 1 cut(s) 569
HhaI GCGC 2 cut(s) 75, 790
Hin1II CATG 3 cut(s) 44, 456, 484
Hin6I GCGC 2 cut(s) 73, 788
HinP1I GCGC 2 cut(s) 73, 788
HincII GTYRAC 1 cut(s) 423
HindII GTYRAC 1 cut(s) 423
HindIII AAGCTT 3 cut(s) 287, 438, 954
HinfI GANTC 5 cut(s) 80, 381, 620, 938, 1043
HpaII CCGG 2 cut(s) 198, 252
HphI GGTGA 3 cut(s) 172, 694, 1004
Hpy166II GTNNAC 1 cut(s) 423
Hpy188I TCNGA 8 cut(s) 47, 85, 138, 217, 247, 633, 696, 1048
Hpy188III TCNNGA 5 cut(s) 98, 717, 911, 942, 998
Hpy8I GTNNAC 1 cut(s) 423
HpyAV CCTTC 4 cut(s) 597, 805, 826, 923
HpyCH4III ACNGT 3 cut(s) 520, 576, 962
HpyCH4IV ACGT 1 cut(s) 129
HpyCH4V TGCA 5 cut(s) 659, 839, 862, 965, 1007
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 490, 962
HpyF3I CTNAG 4 cut(s) 599, 612, 940, 984
HpySE526I ACGT 1 cut(s) 129
Hsp92II CATG 3 cut(s) 44, 456, 484
HspAI GCGC 2 cut(s) 73, 788
Kzo9I GATC 5 cut(s) 203, 217, 330, 691, 994
LmnI GCTCC 3 cut(s) 634, 851, 1000
Lsp1109I GCAGC 2 cut(s) 158, 823
LweI GCATC 1 cut(s) 874
MaeII ACGT 1 cut(s) 129
MalI GATC 5 cut(s) 205, 219, 332, 693, 996
MboI GATC 5 cut(s) 203, 217, 330, 691, 994
MboII GAAGA 5 cut(s) 169, 260, 394, 745, 947
MfeI CAATTG 3 cut(s) 651, 819, 966
MflI RGATCY 1 cut(s) 330
MhlI GDGCHC 1 cut(s) 40
MluCI AATT 7 cut(s) 311, 554, 651, 736, 819, 966, 1024
MlyI GAGTC 3 cut(s) 629, 932, 1052
MmeI TCCRAC 2 cut(s) 25, 1020
MnlI CCTC 8 cut(s) 239, 451, 673, 690, 817, 836, 865, 1029
MseI TTAA 4 cut(s) 276, 416, 780, 891
MspI CCGG 2 cut(s) 198, 252
MspR9I CCNGG 1 cut(s) 252
MunI CAATTG 3 cut(s) 651, 819, 966
MvnI CGCG 1 cut(s) 73
MwoI GCNNNNNNNGC 3 cut(s) 155, 490, 962
NciI CCSGG 1 cut(s) 252
NdeI CATATG 2 cut(s) 339, 625
NdeII GATC 5 cut(s) 203, 217, 330, 691, 994
NlaIII CATG 3 cut(s) 44, 456, 484
NlaIV GGNNCC 2 cut(s) 816, 853
NmeAIII GCCGAG 1 cut(s) 517
NspI RCATGY 2 cut(s) 456, 484
PaeI GCATGC 1 cut(s) 484
PciI ACATGT 1 cut(s) 452
PfeI GAWTC 2 cut(s) 80, 381
PflMI CCANNNNNTGG 1 cut(s) 904
PkrI GCNGC 2 cut(s) 173, 838
PleI GAGTC 3 cut(s) 628, 932, 1051
PpsI GAGTC 3 cut(s) 628, 932, 1051
PpuMI RGGWCCY 1 cut(s) 814
PscI ACATGT 1 cut(s) 452
Psp1406I AACGTT 1 cut(s) 129
Psp5II RGGWCCY 1 cut(s) 814
PspFI CCCAGC 1 cut(s) 385
PspN4I GGNNCC 2 cut(s) 816, 853
PspPI GGNCC 1 cut(s) 814
PspPPI RGGWCCY 1 cut(s) 814
PsuI RGATCY 1 cut(s) 330
RsaI GTAC 3 cut(s) 489, 666, 878
RsaNI GTAC 3 cut(s) 488, 665, 877
SaqAI TTAA 4 cut(s) 276, 416, 780, 891
SatI GCNGC 2 cut(s) 172, 837
Sau3AI GATC 5 cut(s) 203, 217, 330, 691, 994
Sau96I GGNCC 1 cut(s) 814
ScaI AGTACT 1 cut(s) 666
SchI GAGTC 3 cut(s) 629, 932, 1052
ScrFI CCNGG 1 cut(s) 252
SduI GDGCHC 1 cut(s) 40
SfaNI GCATC 1 cut(s) 874
SinI GGWCC 1 cut(s) 814
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
SphI GCATGC 1 cut(s) 484
Sse9I AATT 7 cut(s) 311, 554, 651, 736, 819, 966, 1024
SsiI CCGC 1 cut(s) 209
StyD4I CCNGG 1 cut(s) 250
TaaI ACNGT 3 cut(s) 520, 576, 962
TaiI ACGT 1 cut(s) 132
TaqI TCGA 3 cut(s) 97, 282, 718
TasI AATT 7 cut(s) 311, 554, 651, 736, 819, 966, 1024
TatI WGTACW 2 cut(s) 487, 664
TfiI GAWTC 2 cut(s) 80, 381
Tru1I TTAA 4 cut(s) 276, 416, 780, 891
Tru9I TTAA 4 cut(s) 276, 416, 780, 891
TscAI CASTG 2 cut(s) 156, 864
TseI GCWGC 2 cut(s) 171, 836
TspDTI ATGAA 2 cut(s) 285, 585
TspGWI ACGGA 2 cut(s) 92, 261
TspRI CASTG 2 cut(s) 156, 864
Van91I CCANNNNNTGG 1 cut(s) 904
VpaK11BI GGWCC 1 cut(s) 814
XapI RAATTY 1 cut(s) 736
XceI RCATGY 2 cut(s) 456, 484
ZrmI AGTACT 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.