Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0008226

Physical Location & Seq

Genomic Coordinates Forward (+)

22766796 .. 22770159

Gene Structure 3364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g24450.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGTATATATATATATGCATTACAGATGTACAATTTGGAAGGATTAGACTGCAGTTTTGGTTGGTTTTGGTTTTGTCGTCTCCGGACAGAAATGCTGCAATTCTACCAGGCCTAAGGCCAAGGCATGAAAAAGACCAAAAATTATTCATCAACAATATCATAATTAATAGTAATATCATCACGAGGTTAAGTATAATTCTTGTTGGTTTCCTTGTGCATCGTTCTAAACACTATGATCTTAGTAAATTAACTATTGATATGAGGTATACCAAATCTAAAAGAATGGCCCACTCAACTTTTATTAGCACGTCTTTAAATCCTGTATTGCCACATGTTAGGTCATATATAGGCCAAATTAAGCCAAATGTGAGATTAGCTTATCCTACATACAAGCAAAGCTCAAATTTGAAAAGAAGCATTCTACTTCAGAGATTTCTTTTAGTTAAAGCTAAGTATTCTGATATCCGTCATTCCTTAATTGTTTCCACCGAGAAACATACATTGTTGATAACATTTGATCACAAACAGTATTGTATATGTAGCTCTACTCGTCTAATTTATTATTTTCATTTCCTTAAAAAGTGGTTCATTCATCCAAAAGACATGACTGATGAGAACTTTTATTACCATAATTATGCTTCGAGGGAAGTGTTGAAATTGAGTACTGTATTGTCTAACTTAGCAGACACTCTACAAACACTTCAAACGGAACCGAAAATCAAAATGTTTAAAAAATTCAAAATATTTGATACTCCAATGCAGTATAAAAATTCTCTTTACTCTAATCCGTATCCATGTCGAACCATCCGACGAGGCACGTCATTTTTTTTCCTACAACCTCTTTTAAGTTTTCAAGTTACACATAGGCCCGCCCGTTCGCTACCACCCCAAAACAAAACATGCATCTCGTTTATCTCGGGAATTCGATACATCACAAATCTTATAAAAATTATAGTACGTGCGCAAACAAAATCTCAAGGAATCCAAGATTTAGGAACTAAATTACAATTCAAGATATTATTATCTTATAACCCTCTAGGAAAAGTGGTCAACTCGTTTAGAAAGCCATGGGCGACTTTGGTAATGACTAATCGACCCTGGATGCTAGCCAAAAGGGTCACCACCACTTGGGTTGTGGCAATATCACAACCAAAACCTAACAGATTTCTGGATTTAACCACATATTTGGACATCACAAACGTCATTGATCTTATCCTTTCCTTCGCTCAGCTCTGCCTAGTAGCTAAGGATCCATCCAAAACATGCGTTTGTTTTCACAGAAAGACATGTCACCTATCTTATGTCTTTCTGCATGGGGGATGGCAAACTTCTTCGATCCAGCACGGTTCGCCATTAACATCAATGAAGGCCTTAGCTGTCATACCCAGAAAGTTTAATCTTGAGACTTCAAATCATAGCTTTTACATTGTAGCATTACAATTTCTATTAAATTACCTTATTATAGTGACAACTCAACCAACATGCAACATGCAACATGAATTAGAGCTCCAGTTGCTTCAGTCAACTCAATCCAGCTCTCTAGAGCGGAGTAGAATTGTCTCCCCTCTTATTGTCATCTCCTTCCCTTCCCTCCTCTCACACTTTCTAGATGAGCAGAAACTGCACCAGTGCCCTGTATGCAAAGCTGGAGTCTCCGAGTCCTCTCTAATCCCACTTTATGGCCGGGGACAAACAACAAAACCCCCGAAACCCTCGAAAGGCAGGGCTCCTCATCTTGGTATTGTGATTCCGAGAAGACCCTTTCGTCCTTGTGGGGTTGACACACCTCGATCAGCCGGTACCCCAACCAGTCCATACGTTACTCCACAACTTCATTATCGGAGTTCTCCATACGGTTCACAACTAAACAGTCCCCTACAAGGCCCAATGAATAATCCGGGCGTCGCCACAACCACGATCAATCCAGGAGTTGGAATGTTTGGTGAAATGGTATACGCAAGGGTTTTTGGCAACTCTTTAGCAAACTTTTATACTTATTCGAATTCATATAATCTCGCGGGGAGCGGTAGTCCGAGGGTTAGAAGGCATGTAATGCAGGCTGATAAGTCGCTCGGCAGAATACGTTTTTTTCTCTTCTGTTGCTTTATGTTGTGCCTTCTTTTAGACGTGCGGATTCAACCAGATGAGTGTGTTGCTAATTTTATGTCAATGGTTGAAATAGTTTCTTTTTATTCCTTCATCTCCCGTTTTAGGAGAAACTTAGATATTTCTCGTGCGTGCGTTATACGCTTGTCGGTGATATGCTTACCACTTTTACATAGCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006508 GO:0006511 GO:0006515 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006970 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009611 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009987 GO:0010033 GO:0010035 GO:0010243 GO:0010498 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0019941 GO:0030163 GO:0031984 GO:0032446 GO:0032527 GO:0032991 GO:0033036 GO:0033554 GO:0034613 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036513 GO:0042175 GO:0042221 GO:0042886 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044390 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050896 GO:0051179 GO:0051234 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0051788 GO:0070647 GO:0070727 GO:0070887 GO:0071218 GO:0071310 GO:0071702 GO:0071704 GO:0071705 GO:0071712 GO:0098796 GO:0098827 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX

Protein Analysis

763

Amino Acids

87.32

Weight (kDa)

10.02

Isoelectric Point (pI)

42.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03510 AT4G03510 AT4G03510 AT4G03510
fragaria_vesca	FvH4_6g26170
malus_domestica	MD09G1248700.v1.1 MD17G1241200.v1.1
prunus_persica	Prupe.3G137000_v2.0.a1
pyrus_communis	pycom09g16560 pycom17g24430 pycom17g24440 pycom17g24450
rosa_chinensis	RchiOBHm_Chr2g0126321
rosa_laevigata	RLG00000018901
rosa_multiflora	Rmu_ssc0000264.1_g000040
rosa_roxburghii	Rroxscaffold_2G00117240
rosa_rugosa	Rorug02G0262600 Rorug02G0262700
rosa_samantha	Rh2AG319500 Rh2BG327900 Rh2CG307800 Rh2DG347600
rosa_wichuraiana	Rw2G025890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	944, 1029
AasI	GACNNNNNNGTC	1 cut(s)	1764
Acc16I	TGCGCA	1 cut(s)	963
Acc65I	GGTACC	1 cut(s)	1799
AccB1I	GGYRCC	1 cut(s)	1799
AccB7I	CCANNNNNTGG	3 cut(s)	1128, 1679, 1931
AccBSI	CCGCTC	2 cut(s)	1546, 2025
AccI	GTMKAC	2 cut(s)	266, 1953
AccII	CGCG	1 cut(s)	2018
AccIII	TCCGGA	1 cut(s)	82
AciI	CCGC	5 cut(s)	870, 1546, 2018, 2025, 2131
AclWI	GGATC	3 cut(s)	1244, 1257, 1330
AcoI	YGGCCR	1 cut(s)	1681
AcsI	RAATTY	5 cut(s)	403, 734, 769, 921, 2002
AcuI	CTGAAG	2 cut(s)	410, 1502
AcyI	GRCGYC	1 cut(s)	1902
AfaI	GTAC	4 cut(s)	30, 664, 957, 1801
AfiI	CCNNNNNNNGG	7 cut(s)	1128, 1679, 1718, 1736, 1880, 1931, 2211
AflIII	ACRYGT	2 cut(s)	331, 1286
AgsI	TTSAA	9 cut(s)	409, 655, 704, 739, 854, 1012, 1410, 2138, 2177
AjiI	CACGTC	3 cut(s)	309, 819, 2128
AjnI	CCWGG	3 cut(s)	106, 1097, 1924
Alw21I	GWGCWC	1 cut(s)	1509
Alw26I	GTCTC	4 cut(s)	84, 1397, 1564, 1657
AlwI	GGATC	3 cut(s)	1244, 1257, 1330
AlwNI	CAGNNNCTG	1 cut(s)	1621
Ama87I	CYCGRG	1 cut(s)	916
Aor13HI	TCCGGA	1 cut(s)	82
AoxI	GGCC	8 cut(s)	109, 116, 285, 349, 866, 1368, 1681, 1882
ApeKI	GCWGC	1 cut(s)	95
ApoI	RAATTY	5 cut(s)	403, 734, 769, 921, 2002
ArsI	GACNNNNNNTTYG	4 cut(s)	39, 71, 1635, 1667
AseI	ATTAAT	1 cut(s)	165
Asp718I	GGTACC	1 cut(s)	1799
AspLEI	GCGC	1 cut(s)	964
AspS9I	GGNCC	3 cut(s)	286, 867, 1883
AsuC2I	CCSGG	2 cut(s)	1685, 1899
AsuHPI	GGTGA	4 cut(s)	1111, 1283, 1955, 2269
AsuII	TTCGAA	1 cut(s)	2000
AsuNHI	GCTAGC	1 cut(s)	1105
AvaI	CYCGRG	1 cut(s)	916
AxyI	CCTNAGG	1 cut(s)	113
BaeGI	GKGCMC	1 cut(s)	1634
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	1 cut(s)	1799
BanII	GRGCYC	2 cut(s)	1509, 1729
BauI	CACGAG	2 cut(s)	181, 2232
BbsI	GAAGAC	1 cut(s)	1762
Bbv12I	GWGCWC	1 cut(s)	1509
BbvI	GCAGC	1 cut(s)	82
BccI	CCATC	3 cut(s)	812, 1261, 1314
BciT130I	CCWGG	3 cut(s)	108, 1099, 1926
BciVI	GTATCC	1 cut(s)	801
BclI	TGATCA	1 cut(s)	517
BcnI	CCSGG	2 cut(s)	1685, 1899
BcoDI	GTCTC	4 cut(s)	84, 1397, 1564, 1657
BfaI	CTAG	5 cut(s)	1037, 1106, 1238, 1541, 1607
BfmI	CTRYAG	1 cut(s)	50
BfuI	GTATCC	1 cut(s)	801
BisI	GCNGC	1 cut(s)	96
BlpI	GCTNAGC	1 cut(s)	1227
BlsI	GCNGC	1 cut(s)	97
BmcAI	AGTACT	1 cut(s)	664
Bme1390I	CCNGG	5 cut(s)	108, 1099, 1685, 1899, 1926
BmeT110I	CYCGRG	1 cut(s)	916
BmgBI	CACGTC	3 cut(s)	309, 819, 2128
BmgT120I	GGNCC	3 cut(s)	286, 867, 1883
BmiI	GGNNCC	4 cut(s)	711, 1251, 1728, 1801
BmrFI	CCNGG	5 cut(s)	108, 1099, 1685, 1899, 1926
BmsI	GCATC	3 cut(s)	226, 912, 1092
BmtI	GCTAGC	1 cut(s)	1109
BpiI	GAAGAC	1 cut(s)	1762
BpmI	CTGGAG	2 cut(s)	1493, 1668
Bpu10I	CCTNAGC	2 cut(s)	1245, 1372
Bpu1102I	GCTNAGC	1 cut(s)	1227
Bpu14I	TTCGAA	1 cut(s)	2000
BpuEI	CTTGAG	2 cut(s)	960, 1421
BpuMI	CCSGG	2 cut(s)	1685, 1899
BsaAI	YACGTR	1 cut(s)	959
BsaHI	GRCGYC	1 cut(s)	1902
BsaJI	CCNNGG	5 cut(s)	119, 1067, 1097, 1684, 2033
BsaWI	WCCGGW	1 cut(s)	82
BsaXI	ACNNNNNCTCC	2 cut(s)	2014, 2044
Bsc4I	CCNNNNNNNGG	7 cut(s)	1128, 1679, 1718, 1736, 1880, 1931, 2211
Bse118I	RCCGGY	1 cut(s)	1796
Bse1I	ACTGG	3 cut(s)	1510, 1627, 1809
Bse21I	CCTNAGG	1 cut(s)	113
BseAI	TCCGGA	1 cut(s)	82
BseBI	CCWGG	3 cut(s)	108, 1099, 1926
BseDI	CCNNGG	5 cut(s)	119, 1067, 1097, 1684, 2033
BseGI	GGATG	5 cut(s)	592, 804, 1107, 1253, 1325
BseLI	CCNNNNNNNGG	7 cut(s)	1128, 1679, 1718, 1736, 1880, 1931, 2211
BseMII	CTCAG	1 cut(s)	1241
BseNI	ACTGG	3 cut(s)	1510, 1627, 1809
BseRI	GAGGAG	2 cut(s)	1583, 1719
BseSI	GKGCMC	1 cut(s)	1634
BseXI	GCAGC	1 cut(s)	82
BsgI	GTGCAG	1 cut(s)	1607
Bsh1236I	CGCG	1 cut(s)	2018
BshFI	GGCC	8 cut(s)	111, 118, 287, 351, 868, 1370, 1683, 1884
BshNI	GGYRCC	1 cut(s)	1799
BsiHKAI	GWGCWC	1 cut(s)	1509
BsiHKCI	CYCGRG	1 cut(s)	916
BsiSI	CCGG	4 cut(s)	83, 1684, 1797, 1898
BslFI	GGGAC	2 cut(s)	1701, 1857
BslI	CCNNNNNNNGG	7 cut(s)	1128, 1679, 1718, 1736, 1880, 1931, 2211
BsmAI	GTCTC	4 cut(s)	84, 1397, 1564, 1657
BsmBI	CGTCTC	1 cut(s)	84
BsmFI	GGGAC	2 cut(s)	1701, 1857
BsmI	GAATGC	1 cut(s)	417
BsnI	GGCC	8 cut(s)	111, 118, 287, 351, 868, 1370, 1683, 1884
BsoBI	CYCGRG	1 cut(s)	916
Bsp119I	TTCGAA	1 cut(s)	2000
Bsp1286I	GDGCHC	3 cut(s)	1509, 1634, 1729
Bsp13I	TCCGGA	1 cut(s)	82
Bsp1407I	TGTACA	1 cut(s)	28
Bsp143I	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
Bsp1720I	GCTNAGC	1 cut(s)	1227
Bsp19I	CCATGG	1 cut(s)	1067
BspACI	CCGC	5 cut(s)	870, 1546, 2018, 2025, 2131
BspANI	GGCC	8 cut(s)	111, 118, 287, 351, 868, 1370, 1683, 1884
BspCNI	CTCAG	1 cut(s)	1240
BspEI	TCCGGA	1 cut(s)	82
BspFNI	CGCG	1 cut(s)	2018
BspLI	GGNNCC	4 cut(s)	711, 1251, 1728, 1801
BspMAI	CTGCAG	1 cut(s)	54
BspOI	GCTAGC	1 cut(s)	1109
BspPI	GGATC	3 cut(s)	1244, 1257, 1330
BspT104I	TTCGAA	1 cut(s)	2000
BspT107I	GGYRCC	1 cut(s)	1799
BsrBI	CCGCTC	2 cut(s)	1546, 2025
BsrFI	RCCGGY	1 cut(s)	1796
BsrGI	TGTACA	1 cut(s)	28
BsrI	ACTGG	3 cut(s)	1510, 1627, 1809
BssAI	RCCGGY	1 cut(s)	1796
BssECI	CCNNGG	5 cut(s)	119, 1067, 1097, 1684, 2033
BssMI	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
BssNAI	GTATAC	2 cut(s)	267, 1954
BssNI	GRCGYC	1 cut(s)	1902
BssSI	CACGAG	2 cut(s)	181, 2232
BssT1I	CCWWGG	2 cut(s)	119, 1067
Bst1107I	GTATAC	2 cut(s)	267, 1954
Bst2BI	CACGAG	2 cut(s)	181, 2232
Bst2UI	CCWGG	3 cut(s)	108, 1099, 1926
Bst4CI	ACNGT	5 cut(s)	528, 667, 1346, 1856, 1871
Bst6I	CTCTTC	1 cut(s)	2099
BstACI	GRCGYC	1 cut(s)	1902
BstAPI	GCANNNNNTGC	2 cut(s)	1621, 2053
BstAUI	TGTACA	1 cut(s)	28
BstBAI	YACGTR	1 cut(s)	959
BstBI	TTCGAA	1 cut(s)	2000
BstC8I	GCNNGC	4 cut(s)	870, 1107, 2058, 2239
BstDEI	CTNAG	8 cut(s)	113, 239, 450, 679, 1227, 1245, 1372, 2221
BstDSI	CCRYGG	1 cut(s)	1067
BstEII	GGTNACC	1 cut(s)	1117
BstF5I	GGATG	5 cut(s)	592, 804, 1107, 1253, 1325
BstFNI	CGCG	1 cut(s)	2018
BstHHI	GCGC	1 cut(s)	964
BstKTI	GATC	7 cut(s)	238, 520, 1210, 1252, 1338, 1793, 1920
BstMAI	GTCTC	4 cut(s)	84, 1397, 1564, 1657
BstMBI	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
BstMWI	GCNNNNNNNGC	6 cut(s)	1348, 1513, 1621, 1638, 2053, 2247
BstNI	CCWGG	3 cut(s)	108, 1099, 1926
BstNSI	RCATGY	8 cut(s)	335, 903, 1266, 1290, 1485, 1492, 2051, 2287
BstPI	GGTNACC	1 cut(s)	1117
BstSCI	CCNGG	5 cut(s)	106, 1097, 1683, 1897, 1924
BstSFI	CTRYAG	1 cut(s)	50
BstSLI	GKGCMC	1 cut(s)	1634
BstUI	CGCG	1 cut(s)	2018
BstV1I	GCAGC	1 cut(s)	82
BstV2I	GAAGAC	1 cut(s)	1762
BstX2I	RGATCY	1 cut(s)	1249
BstXI	CCANNNNNNTGG	1 cut(s)	1186
BstYI	RGATCY	1 cut(s)	1249
BstZ17I	GTATAC	2 cut(s)	267, 1954
Bsu36I	CCTNAGG	1 cut(s)	113
BsuI	GTATCC	1 cut(s)	801
BsuRI	GGCC	8 cut(s)	111, 118, 287, 351, 868, 1370, 1683, 1884
BtgI	CCRYGG	1 cut(s)	1067
BtrI	CACGTC	3 cut(s)	309, 819, 2128
BtsCI	GGATG	5 cut(s)	592, 804, 1107, 1253, 1325
BtsIMutI	CAGTG	1 cut(s)	1634
Cac8I	GCNNGC	4 cut(s)	870, 1107, 2058, 2239
CaiI	CAGNNNCTG	1 cut(s)	1621
CfoI	GCGC	1 cut(s)	964
Cfr10I	RCCGGY	1 cut(s)	1796
Cfr13I	GGNCC	3 cut(s)	286, 867, 1883
CseI	GACGC	1 cut(s)	1891
Csp6I	GTAC	4 cut(s)	29, 663, 956, 1800
CspCI	CAANNNNNGTGG	2 cut(s)	1114, 1149
CviQI	GTAC	4 cut(s)	29, 663, 956, 1800
DdeI	CTNAG	8 cut(s)	113, 239, 450, 679, 1227, 1245, 1372, 2221
DpnI	GATC	7 cut(s)	237, 519, 1209, 1251, 1337, 1792, 1919
DpnII	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
DraI	TTTAAA	2 cut(s)	315, 730
DrdI	GACNNNNNNGTC	1 cut(s)	1764
DseDI	GACNNNNNNGTC	1 cut(s)	1764
EaeI	YGGCCR	1 cut(s)	1681
Eam1104I	CTCTTC	1 cut(s)	2099
EarI	CTCTTC	1 cut(s)	2099
Ecl136II	GAGCTC	1 cut(s)	1507
Eco130I	CCWWGG	2 cut(s)	119, 1067
Eco147I	AGGCCT	2 cut(s)	111, 1370
Eco24I	GRGCYC	2 cut(s)	1509, 1729
Eco32I	GATATC	1 cut(s)	463
Eco53kI	GAGCTC	1 cut(s)	1507
Eco57I	CTGAAG	2 cut(s)	410, 1502
Eco81I	CCTNAGG	1 cut(s)	113
Eco88I	CYCGRG	1 cut(s)	916
Eco91I	GGTNACC	1 cut(s)	1117
EcoICRI	GAGCTC	1 cut(s)	1507
EcoO65I	GGTNACC	1 cut(s)	1117
EcoRI	GAATTC	2 cut(s)	921, 2002
EcoRII	CCWGG	3 cut(s)	106, 1097, 1924
EcoRV	GATATC	1 cut(s)	463
EcoT14I	CCWWGG	2 cut(s)	119, 1067
EcoT22I	ATGCAT	2 cut(s)	20, 905
EcoT38I	GRGCYC	2 cut(s)	1509, 1729
ErhI	CCWWGG	2 cut(s)	119, 1067
Esp3I	CGTCTC	1 cut(s)	84
FaqI	GGGAC	2 cut(s)	1701, 1857
FauI	CCCGC	2 cut(s)	877, 2011
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	2 cut(s)	266, 1953
Fnu4HI	GCNGC	1 cut(s)	96
FokI	GGATG	5 cut(s)	579, 791, 1114, 1240, 1332
FriOI	GRGCYC	2 cut(s)	1509, 1729
Fsp4HI	GCNGC	1 cut(s)	96
FspBI	CTAG	5 cut(s)	1037, 1106, 1238, 1541, 1607
FspI	TGCGCA	1 cut(s)	963
GlaI	GCGC	1 cut(s)	963
GluI	GCNGC	1 cut(s)	96
GsuI	CTGGAG	2 cut(s)	1493, 1668
HaeIII	GGCC	8 cut(s)	111, 118, 287, 351, 868, 1370, 1683, 1884
HapII	CCGG	4 cut(s)	83, 1684, 1797, 1898
HgaI	GACGC	1 cut(s)	1891
HhaI	GCGC	1 cut(s)	964
Hin1I	GRCGYC	1 cut(s)	1902
Hin6I	GCGC	1 cut(s)	962
HinP1I	GCGC	1 cut(s)	962
HincII	GTYRAC	3 cut(s)	1051, 1524, 1780
HindII	GTYRAC	3 cut(s)	1051, 1524, 1780
HinfI	GANTC	5 cut(s)	981, 1650, 1658, 1747, 2134
HpaII	CCGG	4 cut(s)	83, 1684, 1797, 1898
HphI	GGTGA	4 cut(s)	1111, 1283, 1955, 2269
Hpy166II	GTNNAC	6 cut(s)	267, 1051, 1524, 1780, 1859, 1954
Hpy188I	TCNGA	7 cut(s)	429, 460, 809, 1657, 1752, 1842, 2034
Hpy188III	TCNNGA	8 cut(s)	83, 181, 918, 1012, 1169, 1400, 1541, 1607
Hpy8I	GTNNAC	6 cut(s)	267, 1051, 1524, 1780, 1859, 1954
Hpy99I	CGWCG	2 cut(s)	813, 1907
HpyAV	CCTTC	8 cut(s)	33, 1231, 1360, 1591, 1596, 2037, 2126, 2206
HpyCH4III	ACNGT	5 cut(s)	528, 667, 1346, 1856, 1871
HpyCH4IV	ACGT	7 cut(s)	308, 818, 958, 1200, 1818, 2083, 2127
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1348, 1513, 1621, 1638, 2053, 2247
HpyF3I	CTNAG	8 cut(s)	113, 239, 450, 679, 1227, 1245, 1372, 2221
HpySE526I	ACGT	7 cut(s)	308, 818, 958, 1200, 1818, 2083, 2127
Hsp92I	GRCGYC	1 cut(s)	1902
HspAI	GCGC	1 cut(s)	962
Kpn2I	TCCGGA	1 cut(s)	82
KpnI	GGTACC	1 cut(s)	1803
Ksp22I	TGATCA	1 cut(s)	517
Kzo9I	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
LmnI	GCTCC	3 cut(s)	1512, 1732, 2022
Lsp1109I	GCAGC	1 cut(s)	82
LweI	GCATC	3 cut(s)	226, 912, 1092
MaeI	CTAG	5 cut(s)	1037, 1106, 1238, 1541, 1607
MaeII	ACGT	7 cut(s)	308, 818, 958, 1200, 1818, 2083, 2127
MaeIII	GTNAC	5 cut(s)	856, 1117, 1289, 1465, 1819
MalI	GATC	7 cut(s)	237, 519, 1209, 1251, 1337, 1792, 1919
MbiI	CCGCTC	2 cut(s)	1546, 2025
MboI	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
MboII	GAAGA	3 cut(s)	1323, 1767, 2086
MflI	RGATCY	1 cut(s)	1249
MhlI	GDGCHC	3 cut(s)	1509, 1634, 1729
MlyI	GAGTC	2 cut(s)	1659, 1667
MmeI	TCCRAC	2 cut(s)	832, 1912
Mph1103I	ATGCAT	2 cut(s)	20, 905
MroI	TCCGGA	1 cut(s)	82
MslI	CAYNNNNRTG	1 cut(s)	633
MspI	CCGG	4 cut(s)	83, 1684, 1797, 1898
MspR9I	CCNGG	5 cut(s)	108, 1099, 1685, 1899, 1926
Mva1269I	GAATGC	1 cut(s)	417
MvaI	CCWGG	3 cut(s)	108, 1099, 1926
MvnI	CGCG	1 cut(s)	2018
MwoI	GCNNNNNNNGC	6 cut(s)	1348, 1513, 1621, 1638, 2053, 2247
NciI	CCSGG	2 cut(s)	1685, 1899
NcoI	CCATGG	1 cut(s)	1067
NdeII	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
NheI	GCTAGC	1 cut(s)	1105
NlaIV	GGNNCC	4 cut(s)	711, 1251, 1728, 1801
NmeAIII	GCCGAG	1 cut(s)	2052
NmuCI	GTSAC	3 cut(s)	1117, 1289, 1465
NsbI	TGCGCA	1 cut(s)	963
NsiI	ATGCAT	2 cut(s)	20, 905
NspI	RCATGY	8 cut(s)	335, 903, 1266, 1290, 1485, 1492, 2051, 2287
NspV	TTCGAA	1 cut(s)	2000
PceI	AGGCCT	2 cut(s)	111, 1370
PciI	ACATGT	2 cut(s)	331, 1286
PcsI	WCGNNNNNNNCGW	1 cut(s)	805
PctI	GAATGC	1 cut(s)	417
PfeI	GAWTC	3 cut(s)	981, 1747, 2134
PflMI	CCANNNNNTGG	3 cut(s)	1128, 1679, 1931
PfoI	TCCNGGA	1 cut(s)	1924
PkrI	GCNGC	1 cut(s)	97
PleI	GAGTC	2 cut(s)	1658, 1666
PpsI	GAGTC	2 cut(s)	1658, 1666
Ppu21I	YACGTR	1 cut(s)	959
PscI	ACATGT	2 cut(s)	331, 1286
PshBI	ATTAAT	1 cut(s)	165
PsiI	TTATAA	2 cut(s)	944, 1029
Psp124BI	GAGCTC	1 cut(s)	1509
Psp6I	CCWGG	3 cut(s)	106, 1097, 1924
PspEI	GGTNACC	1 cut(s)	1117
PspGI	CCWGG	3 cut(s)	106, 1097, 1924
PspN4I	GGNNCC	4 cut(s)	711, 1251, 1728, 1801
PspPI	GGNCC	3 cut(s)	286, 867, 1883
PsrI	GAACNNNNNNTAC	2 cut(s)	608, 640
PstI	CTGCAG	1 cut(s)	54
PstNI	CAGNNNCTG	1 cut(s)	1621
PsuI	RGATCY	1 cut(s)	1249
RsaI	GTAC	4 cut(s)	30, 664, 957, 1801
RsaNI	GTAC	4 cut(s)	29, 663, 956, 1800
RseI	CAYNNNNRTG	1 cut(s)	633
SacI	GAGCTC	1 cut(s)	1509
SatI	GCNGC	1 cut(s)	96
Sau3AI	GATC	7 cut(s)	235, 517, 1207, 1249, 1335, 1790, 1917
Sau96I	GGNCC	3 cut(s)	286, 867, 1883
ScaI	AGTACT	1 cut(s)	664
SchI	GAGTC	2 cut(s)	1659, 1667
ScrFI	CCNGG	5 cut(s)	108, 1099, 1685, 1899, 1926
SduI	GDGCHC	3 cut(s)	1509, 1634, 1729
SfaNI	GCATC	3 cut(s)	226, 912, 1092
SfcI	CTRYAG	1 cut(s)	50
SfuI	TTCGAA	1 cut(s)	2000
SmiMI	CAYNNNNRTG	1 cut(s)	633
SmlI	CTYRAG	2 cut(s)	975, 1400
SmoI	CTYRAG	2 cut(s)	975, 1400
SseBI	AGGCCT	2 cut(s)	111, 1370
SsiI	CCGC	5 cut(s)	870, 1546, 2018, 2025, 2131
SspI	AATATT	1 cut(s)	744
SspMI	CTAG	5 cut(s)	1037, 1106, 1238, 1541, 1607
SstI	GAGCTC	1 cut(s)	1509
StuI	AGGCCT	2 cut(s)	111, 1370
StyD4I	CCNGG	5 cut(s)	106, 1097, 1683, 1897, 1924
StyI	CCWWGG	2 cut(s)	119, 1067
TaaI	ACNGT	5 cut(s)	528, 667, 1346, 1856, 1871
TaiI	ACGT	7 cut(s)	311, 821, 961, 1203, 1821, 2086, 2130
TaqI	TCGA	8 cut(s)	641, 799, 925, 1093, 1334, 1715, 1789, 2000
TatI	WGTACW	2 cut(s)	28, 662
TfiI	GAWTC	3 cut(s)	981, 1747, 2134
TscAI	CASTG	1 cut(s)	1634
TseFI	GTSAC	3 cut(s)	1117, 1289, 1465
TseI	GCWGC	1 cut(s)	95
Tsp45I	GTSAC	3 cut(s)	1117, 1289, 1465
TspGWI	ACGGA	3 cut(s)	455, 722, 777
TspRI	CASTG	1 cut(s)	1634
Van91I	CCANNNNNTGG	3 cut(s)	1128, 1679, 1931
VspI	ATTAAT	1 cut(s)	165
XapI	RAATTY	5 cut(s)	403, 734, 769, 921, 2002
XbaI	TCTAGA	2 cut(s)	1540, 1606
XceI	RCATGY	8 cut(s)	335, 903, 1266, 1290, 1485, 1492, 2051, 2287
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1132
XmiI	GTMKAC	2 cut(s)	266, 1953
XspI	CTAG	5 cut(s)	1037, 1106, 1238, 1541, 1607
ZrmI	AGTACT	1 cut(s)	664
Zsp2I	ATGCAT	2 cut(s)	20, 905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.