Uncharacterised protein family UPF0052
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g52500 |
| malus_domestica | MD05G1302500.v1.1 MD16G1033100.v1.1 |
| rosa_chinensis | RchiOBHm_Chr6g0259491 RchiOBHm_Chr6g0290121 |
| rosa_laevigata | RLG00000014201 RLG00000015278 |
| rosa_multiflora | Rmu_sc0005711.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00177350 |
| rosa_rugosa | Rorug06G0209700 Rorug06G0209900 |
| rosa_samantha | Rh1CG249200 Rh5BG077800 Rh6AG320300 Rh6BG327600 Rh6CG094100 Rh6CG333700 |
| rosa_wichuraiana | Rw6G027640 Rw6G027670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 32, 111 |
| AcoI | YGGCCR | 1 cut(s) | 9 |
| AfaI | GTAC | 1 cut(s) | 246 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AluBI | AGCT | 2 cut(s) | 205, 257 |
| AluI | AGCT | 2 cut(s) | 205, 257 |
| Alw21I | GWGCWC | 1 cut(s) | 154 |
| Alw26I | GTCTC | 1 cut(s) | 187 |
| AoxI | GGCC | 1 cut(s) | 9 |
| Bbv12I | GWGCWC | 1 cut(s) | 154 |
| BceAI | ACGGC | 2 cut(s) | 23, 95 |
| BcoDI | GTCTC | 1 cut(s) | 187 |
| BmsI | GCATC | 1 cut(s) | 64 |
| BsaI | GGTCTC | 1 cut(s) | 187 |
| BsaJI | CCNNGG | 1 cut(s) | 27 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| Bse118I | RCCGGY | 1 cut(s) | 11 |
| BseDI | CCNNGG | 1 cut(s) | 27 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 276 |
| Bsh1285I | CGRYCG | 1 cut(s) | 36 |
| BshFI | GGCC | 1 cut(s) | 11 |
| BsiEI | CGRYCG | 1 cut(s) | 36 |
| BsiHKAI | GWGCWC | 1 cut(s) | 154 |
| BsiSI | CCGG | 2 cut(s) | 12, 43 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsmAI | GTCTC | 1 cut(s) | 187 |
| BsnI | GGCC | 1 cut(s) | 11 |
| Bso31I | GGTCTC | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 1 cut(s) | 154 |
| Bsp1407I | TGTACA | 1 cut(s) | 244 |
| BspACI | CCGC | 2 cut(s) | 32, 111 |
| BspANI | GGCC | 1 cut(s) | 11 |
| BspCNI | CTCAG | 1 cut(s) | 275 |
| BspHI | TCATGA | 1 cut(s) | 281 |
| BspTNI | GGTCTC | 1 cut(s) | 187 |
| BsrFI | RCCGGY | 1 cut(s) | 11 |
| BsrGI | TGTACA | 1 cut(s) | 244 |
| BssAI | RCCGGY | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 27 |
| Bst4CI | ACNGT | 2 cut(s) | 107, 198 |
| BstAUI | TGTACA | 1 cut(s) | 244 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 238 |
| BstDEI | CTNAG | 1 cut(s) | 262 |
| BstMAI | GTCTC | 1 cut(s) | 187 |
| BstMCI | CGRYCG | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 83 |
| BsuRI | GGCC | 1 cut(s) | 11 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 238 |
| CciI | TCATGA | 1 cut(s) | 281 |
| Cfr10I | RCCGGY | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 245 |
| CviAII | CATG | 1 cut(s) | 282 |
| CviJI | RGCY | 7 cut(s) | 11, 86, 179, 205, 240, 257, 269 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 86, 179, 205, 240, 257, 269 |
| CviQI | GTAC | 1 cut(s) | 245 |
| DdeI | CTNAG | 1 cut(s) | 262 |
| EaeI | YGGCCR | 1 cut(s) | 9 |
| Eco31I | GGTCTC | 1 cut(s) | 187 |
| FaeI | CATG | 1 cut(s) | 285 |
| FaiI | YATR | 5 cut(s) | 131, 184, 186, 188, 283 |
| FatI | CATG | 1 cut(s) | 281 |
| FauI | CCCGC | 1 cut(s) | 104 |
| HaeIII | GGCC | 1 cut(s) | 11 |
| HapII | CCGG | 2 cut(s) | 12, 43 |
| Hin1II | CATG | 1 cut(s) | 285 |
| HinfI | GANTC | 2 cut(s) | 121, 225 |
| HpaII | CCGG | 2 cut(s) | 12, 43 |
| Hpy166II | GTNNAC | 2 cut(s) | 65, 247 |
| Hpy188I | TCNGA | 5 cut(s) | 28, 94, 224, 230, 265 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 282 |
| Hpy8I | GTNNAC | 2 cut(s) | 65, 247 |
| HpyAV | CCTTC | 2 cut(s) | 136, 167 |
| HpyCH4III | ACNGT | 2 cut(s) | 107, 198 |
| HpyCH4V | TGCA | 1 cut(s) | 77 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 83 |
| HpyF3I | CTNAG | 1 cut(s) | 262 |
| Hsp92II | CATG | 1 cut(s) | 285 |
| LpnPI | CCDG | 6 cut(s) | 25, 56, 146, 151, 196, 222 |
| LweI | GCATC | 1 cut(s) | 64 |
| MaeIII | GTNAC | 2 cut(s) | 101, 170 |
| MboII | GAAGA | 1 cut(s) | 284 |
| MfeI | CAATTG | 1 cut(s) | 47 |
| MhlI | GDGCHC | 1 cut(s) | 154 |
| MluCI | AATT | 1 cut(s) | 47 |
| MlyI | GAGTC | 1 cut(s) | 130 |
| MnlI | CCTC | 2 cut(s) | 22, 34 |
| MspI | CCGG | 2 cut(s) | 12, 43 |
| MunI | CAATTG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 83 |
| NlaIII | CATG | 1 cut(s) | 285 |
| PagI | TCATGA | 1 cut(s) | 281 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PleI | GAGTC | 1 cut(s) | 129 |
| PpsI | GAGTC | 1 cut(s) | 129 |
| RsaI | GTAC | 1 cut(s) | 246 |
| RsaNI | GTAC | 1 cut(s) | 245 |
| SchI | GAGTC | 1 cut(s) | 130 |
| SduI | GDGCHC | 1 cut(s) | 154 |
| SetI | ASST | 2 cut(s) | 207, 259 |
| SfaNI | GCATC | 1 cut(s) | 64 |
| Sse9I | AATT | 1 cut(s) | 47 |
| SsiI | CCGC | 2 cut(s) | 32, 111 |
| TaaI | ACNGT | 2 cut(s) | 107, 198 |
| TaqI | TCGA | 1 cut(s) | 201 |
| TasI | AATT | 1 cut(s) | 47 |
| TatI | WGTACW | 1 cut(s) | 244 |
| TfiI | GAWTC | 1 cut(s) | 225 |