Uncharacterised protein family UPF0052
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g52500 |
| malus_domestica | MD05G1302500.v1.1 MD16G1033100.v1.1 |
| rosa_chinensis | RchiOBHm_Chr6g0259491 RchiOBHm_Chr6g0290121 |
| rosa_laevigata | RLG00000014201 RLG00000015278 |
| rosa_multiflora | Rmu_sc0005711.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00177350 |
| rosa_rugosa | Rorug06G0209700 Rorug06G0209900 |
| rosa_samantha | Rh1CG249200 Rh5BG077800 Rh6AG320300 Rh6BG327600 Rh6CG094100 Rh6CG333700 |
| rosa_wichuraiana | Rw6G027640 Rw6G027670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 98 |
| AcoI | YGGCCR | 2 cut(s) | 54, 90 |
| AcsI | RAATTY | 1 cut(s) | 11 |
| AcuI | CTGAAG | 1 cut(s) | 8 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 59 |
| AgsI | TTSAA | 1 cut(s) | 10 |
| AoxI | GGCC | 2 cut(s) | 54, 90 |
| ApoI | RAATTY | 1 cut(s) | 11 |
| AspS9I | GGNCC | 1 cut(s) | 50 |
| AvaII | GGWCC | 1 cut(s) | 50 |
| BceAI | ACGGC | 3 cut(s) | 41, 89, 161 |
| Bme18I | GGWCC | 1 cut(s) | 50 |
| BmgT120I | GGNCC | 1 cut(s) | 50 |
| BmsI | GCATC | 3 cut(s) | 49, 68, 130 |
| BpuEI | CTTGAG | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 59 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 59 |
| BseX3I | CGGCCG | 1 cut(s) | 54 |
| Bsh1285I | CGRYCG | 2 cut(s) | 57, 102 |
| BshFI | GGCC | 2 cut(s) | 56, 92 |
| BsiEI | CGRYCG | 2 cut(s) | 57, 102 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 59 |
| BsnI | GGCC | 2 cut(s) | 56, 92 |
| BspACI | CCGC | 1 cut(s) | 98 |
| BspANI | GGCC | 2 cut(s) | 56, 92 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 1 cut(s) | 72 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstMCI | CGRYCG | 2 cut(s) | 57, 102 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BstZI | CGGCCG | 1 cut(s) | 54 |
| BsuRI | GGCC | 2 cut(s) | 56, 92 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 1 cut(s) | 50 |
| CviJI | RGCY | 3 cut(s) | 56, 92, 152 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 92, 152 |
| EaeI | YGGCCR | 2 cut(s) | 54, 90 |
| EagI | CGGCCG | 1 cut(s) | 54 |
| EclXI | CGGCCG | 1 cut(s) | 54 |
| Eco47I | GGWCC | 1 cut(s) | 50 |
| Eco52I | CGGCCG | 1 cut(s) | 54 |
| Eco57I | CTGAAG | 1 cut(s) | 8 |
| FaiI | YATR | 1 cut(s) | 20 |
| FokI | GGATG | 1 cut(s) | 27 |
| HaeIII | GGCC | 2 cut(s) | 56, 92 |
| HapII | CCGG | 1 cut(s) | 53 |
| HpaII | CCGG | 1 cut(s) | 53 |
| Hpy166II | GTNNAC | 1 cut(s) | 131 |
| Hpy188I | TCNGA | 3 cut(s) | 45, 62, 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 75 |
| Hpy8I | GTNNAC | 1 cut(s) | 131 |
| Hpy99I | CGWCG | 1 cut(s) | 62 |
| HpyCH4III | ACNGT | 1 cut(s) | 72 |
| HpyCH4V | TGCA | 2 cut(s) | 112, 143 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| LpnPI | CCDG | 3 cut(s) | 66, 88, 122 |
| LweI | GCATC | 3 cut(s) | 49, 68, 130 |
| MfeI | CAATTG | 1 cut(s) | 113 |
| MluCI | AATT | 2 cut(s) | 11, 113 |
| MmeI | TCCRAC | 1 cut(s) | 40 |
| MnlI | CCTC | 1 cut(s) | 88 |
| MseI | TTAA | 1 cut(s) | 168 |
| MslI | CAYNNNNRTG | 1 cut(s) | 45 |
| MspI | CCGG | 1 cut(s) | 53 |
| MunI | CAATTG | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| PspPI | GGNCC | 1 cut(s) | 50 |
| RseI | CAYNNNNRTG | 1 cut(s) | 45 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| Sau96I | GGNCC | 1 cut(s) | 50 |
| SfaNI | GCATC | 3 cut(s) | 49, 68, 130 |
| SinI | GGWCC | 1 cut(s) | 50 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 45 |
| SmlI | CTYRAG | 1 cut(s) | 82 |
| SmoI | CTYRAG | 1 cut(s) | 82 |
| Sse9I | AATT | 2 cut(s) | 11, 113 |
| SsiI | CCGC | 1 cut(s) | 98 |
| TaaI | ACNGT | 1 cut(s) | 72 |
| TasI | AATT | 2 cut(s) | 11, 113 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| VpaK11BI | GGWCC | 1 cut(s) | 50 |
| XapI | RAATTY | 1 cut(s) | 11 |