RchiOBHm_Chr6g0259491

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
14741783 .. 14742090
308 bp
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UTR
Exon/CDS
Intron
PRQ23268

Sequence Viewer

Length: 126 bp
ATGCCGAGTCGATTCGGTTGCTTCCCCTTTTGGACCAGATTGATCCCTCCGTGCATTTCGCTTCGATACCTCTACATCCTGGTTTTGATGGATGGTTCTGTAAACAATTTTGATTATCAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

41

Amino Acids

4.85

Weight (kDa)

7.8

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 37
AjnI CCWGG 1 cut(s) 78
AlwI GGATC 1 cut(s) 37
AspS9I GGNCC 1 cut(s) 33
AvaII GGWCC 1 cut(s) 33
BccI CCATC 2 cut(s) 82, 86
BcgI CGANNNNNNTGC 1 cut(s) 34
BciT130I CCWGG 1 cut(s) 80
Bme1390I CCNGG 1 cut(s) 80
Bme18I GGWCC 1 cut(s) 33
BmgT120I GGNCC 1 cut(s) 33
BmrFI CCNGG 1 cut(s) 80
BseBI CCWGG 1 cut(s) 80
BseGI GGATG 2 cut(s) 75, 97
Bsp143I GATC 1 cut(s) 42
BspPI GGATC 1 cut(s) 37
BssMI GATC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 80
BstF5I GGATG 2 cut(s) 75, 97
BstKTI GATC 1 cut(s) 45
BstMBI GATC 1 cut(s) 42
BstNI CCWGG 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 78
BtsCI GGATG 2 cut(s) 75, 97
Cfr13I GGNCC 1 cut(s) 33
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 33
EcoRII CCWGG 1 cut(s) 78
FokI GGATG 2 cut(s) 62, 104
HinfI GANTC 2 cut(s) 7, 12
Hpy166II GTNNAC 1 cut(s) 103
Hpy8I GTNNAC 1 cut(s) 103
HpyCH4V TGCA 1 cut(s) 54
Kzo9I GATC 1 cut(s) 42
LpnPI CCDG 4 cut(s) 49, 65, 92, 104
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MluCI AATT 1 cut(s) 106
MlyI GAGTC 1 cut(s) 16
MnlI CCTC 2 cut(s) 57, 80
MspR9I CCNGG 1 cut(s) 80
MvaI CCWGG 1 cut(s) 80
NdeII GATC 1 cut(s) 42
NmeAIII GCCGAG 1 cut(s) 30
PfeI GAWTC 1 cut(s) 12
PleI GAGTC 1 cut(s) 15
PpsI GAGTC 1 cut(s) 15
Psp6I CCWGG 1 cut(s) 78
PspGI CCWGG 1 cut(s) 78
PspPI GGNCC 1 cut(s) 33
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 33
SchI GAGTC 1 cut(s) 16
ScrFI CCNGG 1 cut(s) 80
SetI ASST 1 cut(s) 72
SgeI CNNG 5 cut(s) 18, 48, 63, 91, 92
SinI GGWCC 1 cut(s) 33
Sse9I AATT 1 cut(s) 106
StyD4I CCNGG 1 cut(s) 78
TaqI TCGA 2 cut(s) 10, 64
TasI AATT 1 cut(s) 106
TfiI GAWTC 1 cut(s) 12
TspGWI ACGGA 1 cut(s) 39
VpaK11BI GGWCC 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.